Prupe.4G043300_v2.0.a1

Wings apart-like protein regulation of heterochromatin

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
2068274 .. 2075853
7580 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G043300.2

Sequence Viewer

Length: 2694 bp
ATGATCGTGAGAACGTACGGTCGTCGCAAGGGAGGCATTCCTAGAACTTATTCCGACTCAACGTTAAACGACGCCGTTCACGACGACGACGACAGCAACGACCCCTTCGGATTTTCTGTGTCTCAACCTCAAGAAAGCTCCCAAGGCCACCTCTACAGCAGTCTTAATTTCTCATCTCAAGACTCCTCTTCCCAGTGGGCCCACTTTGATTCGGACCCCTACGTCCCCGAGGACTCTTTGAAGCGCTCCTCTTTCGACGGTCCGGTAAACGGCGCCGTTAGGAGGTCCAAGAAAGCCAAGACTCGAAAGGAGGTGGTCAAGAACTCCAGGCCGCCGTCAATTCTCGCGACGTCGACTTTGATGGAGGCACAGGAATTTGGGGAGATGATGGAGCATGTGGACGAGGTCAATTTCGCTTTGGATGGGCTTAGGAAGGGTCAGCCAGTTCGGATCAGAAGGGCTAGCTTGTTGTCCTTGTTGTCTATCTGTGGCACGGCTCAGCAGAGACGGCTTCTCAGGACGCAGGGGATGGCAAAAACAATAATCGAGGCTATATTGGGTCTCAGCTTTGATGATTCACCCAGCAATCTGGCTGCCACAAGTATTTTCTATGTTTTGACAAGCGATGGTCAGGATGATCACCTTCTGGAATCACCAAGCTCTATTAATTTTTTGATTAGGTTTTGCAAACCAATTGTCTCAAACACTATTGAAGATAAAGCACCTAAAATTGGACGGAAGCTTCTAGCATTGCGTATGGGTGCTGACATCTCGCAATGTACCACGAAAAGATTAGACTCCAGCTCTGCTGCCATCTTTTCCAAAGTTCAAGAAATTCTTGTAGGTTGCAAGGAATTGAAACCAAGTTGTGCGGATGATGGTGAAATGGGAAAGCCAGAGTTATGCCCAAAATGGATAGCTTTGCTGACTATGGAGAAAGCTTGCTTATCCACTATTTCTCTTGAAGAAACCTCTGGTACAGTAAGGAAGTCTGGGAGCAACTTTAAGGAAAAATTACGAGAGCTTGGAGGTCTTGATGCTGTCTTTGAGGTTTCCGTGAGTTGCCATTCCGATATGGAGGGTTGGTTAAAAGATAGCTCGCCTTCTGCATGGGAAAAGGAAATTGACATGGTGCGGAGCCTGGTTCTGCTTTTGAAATGTTTGAAGATTATGGAAAACGCCACGTTCCTGAGTAAAGAGAATCAGAGCCATTTGCTAGGAATGAAACGACACTTGGATCCTGCAGGAAATCCCGTGTCTTTTACAGAACTTGTTATAAGTGCCATCAATATTCTATCAGGTCTTTATCTACATAAAAATTTCTCTTCTGCCTCCAATGATGAAAAGTCTTTAAATCTTTCTAATGGGAGTAAAAATGCTTCTGAGAAGAGCTCCGATGTATGTCAGGGCAGCCAATTTTTGCCCACTGCTCGCTCTGTATATTCTATATCCAGTTCGGAAACTACCAGCACCTCCATGACTGATACTTATTCAGTGAAGACGGGACTCAATTCTTCCAGATATGGTTCATCCAGTGGTACATCAAGGCATTTAAATGGTGGAACCGGTACATTTAGCTGTGCTTCTAGGAAGGATGCTGGTCTCAGTCAGAGATCCTATATTTCTGAAGACTCCAAAATTGATCTTTCTGAGAGTCAAGATCCTTTTGCATTTAGCTATGATGATTCCCGGAAACGTTCTGGTCTCAGTCAAAGATCGTATGTTTCTGAAGACTCCAAAATTGATCTTTCACAGGAGAGTCAAGATCCTTTTGCATTTGATGAAGATGATTTTAAACCTTCCAAGTGGGACCTATTATCTGGCAAGAAAAAGATATCTCTATCGCAACAGAATGAGGCAGCATACAGAGAACTTGATAACACTTTGCAGCTGATTATGAGCCAAGAAGCATCAAGTAATGGAGAAAACCATCTGGCACATGAGACATCCTATTCAGGGGCTGTTGGTAGAGAAGGTTCCGGTCTTCTAGCGGACTGCCTTCTTACTGCTGTCAAGGTTCTGATGAACTTGGCAAATGATAATCCTGTTGGCTGCCAGCAAATTGCTGCCAATGGAGGACTGGAGACCTTGTCTTCTTTGATTGCCAACCACTTCCCTTTGTTCAGCTCATTATCATCTCCCTTCAGCGAGAGAAGTGAGAATACTTCAAGCGTTGAACTTGGCCATCAGAATAATAGACATCTTACTGATCAAGAGCTAGACTTTCTTGTTGCTATTTTGGGCCTGCTTGTGAACTTGGTTGAGAAAGATGGCCAAAACAGATCACGGCTTGCAGCAGCTAGTGTTCATGTACCTAGTTCAGAAGGGTTTGAAGAGGAGAGCCGCAAGGATCTAATTCTGCTTATCTGCTCTATTTTCCTTGCCAACCAAGGTGCAGGCGAGGGAGGTGCAGAAGAAATGATTTTGCCAAACGACGAGGCAGCTGTATTACAAGGGGAACAAGAAGCGGAGAAAATGATAGTGGAAGCTTATTCTGCCCTTCTTCTAGCATTCCTTTCAACTGAAAGCAAGAGCATACGTGATGCGATTGCTGACTGTCTCCCAGATCGCAGCCTGGCTATCCTAGTACCTGTGTTGGACAGATTTGTGGCATTCCATTTGACGTTAAACATGATATCTCCAGAGACTCATAAAGCTGTGAGCGAAGTAATTGAGTCATGTAGGATACGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

898

Amino Acids

97.91

Weight (kDa)

5.26

Isoelectric Point (pI)

54.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1277
AasI GACNNNNNNGTC 1 cut(s) 221
AatII GACGTC 1 cut(s) 353
AccB1I GGYRCC 1 cut(s) 272
AccI GTMKAC 1 cut(s) 353
AccII CGCG 1 cut(s) 347
AciI CCGC 6 cut(s) 332, 872, 1135, 1991, 2344, 2468
AclI AACGTT 2 cut(s) 62, 1696
AclWI GGATC 7 cut(s) 458, 1232, 1245, 1608, 1655, 1760, 2358
AcoI YGGCCR 2 cut(s) 2182, 2272
AcsI RAATTY 3 cut(s) 374, 834, 1318
AcuI CTGAAG 3 cut(s) 1647, 1749, 2128
AcyI GRCGYC 3 cut(s) 72, 273, 350
AfaI GTAC 7 cut(s) 17, 781, 979, 1540, 1570, 2313, 2589
AfeI AGCGCT 1 cut(s) 245
AfiI CCNNNNNNNGG 4 cut(s) 269, 282, 731, 1956
AgeI ACCGGT 1 cut(s) 1565
AjnI CCWGG 3 cut(s) 326, 1140, 2574
AjuI GAANNNNNNNTTGG 2 cut(s) 1217, 1249
Alw21I GWGCWC 1 cut(s) 1394
AlwI GGATC 7 cut(s) 458, 1232, 1245, 1608, 1655, 1760, 2358
AlwNI CAGNNNCTG 1 cut(s) 1961
Ama87I CYCGRG 1 cut(s) 227
Aor51HI AGCGCT 1 cut(s) 245
AoxI GGCC 6 cut(s) 145, 198, 329, 2182, 2242, 2272
ApaI GGGCCC 1 cut(s) 202
ApoI RAATTY 3 cut(s) 374, 834, 1318
ArsI GACNNNNNNTTYG 4 cut(s) 340, 372, 681, 713
AseI ATTAAT 1 cut(s) 666
AsiGI ACCGGT 1 cut(s) 1565
Asp700I GAANNNNTTC 1 cut(s) 49
AspLEI GCGC 2 cut(s) 246, 275
AspS9I GGNCC 7 cut(s) 198, 199, 214, 260, 285, 1810, 2242
AsuC2I CCSGG 1 cut(s) 1690
AsuHPI GGTGA 4 cut(s) 570, 632, 645, 893
AsuNHI GCTAGC 1 cut(s) 461
AvaI CYCGRG 1 cut(s) 227
AvaII GGWCC 4 cut(s) 214, 260, 285, 1810
BaeGI GKGCMC 1 cut(s) 202
BalI TGGCCA 2 cut(s) 2184, 2274
BamHI GGATCC 1 cut(s) 1237
BanI GGYRCC 1 cut(s) 272
BanII GRGCYC 2 cut(s) 202, 1394
BarI GAAGNNNNNNTAC 4 cut(s) 1363, 1395, 2146, 2178
BbsI GAAGAC 5 cut(s) 1505, 1635, 1737, 1976, 2085
Bbv12I GWGCWC 1 cut(s) 1394
BceAI ACGGC 7 cut(s) 59, 260, 286, 319, 510, 524, 2303
BcgI CGANNNNNNTGC 2 cut(s) 2390, 2424
BciT130I CCWGG 3 cut(s) 328, 1142, 2576
BciVI GTATCC 1 cut(s) 2679
BclI TGATCA 2 cut(s) 637, 2209
BcnI CCSGG 1 cut(s) 1690
BfmI CTRYAG 2 cut(s) 154, 1242
BfoI RGCGCY 2 cut(s) 247, 276
BfuI GTATCC 1 cut(s) 2679
BlpI GCTNAGC 1 cut(s) 498
Bme1390I CCNGG 4 cut(s) 328, 1142, 1690, 2576
Bme18I GGWCC 4 cut(s) 214, 260, 285, 1810
BmeT110I CYCGRG 1 cut(s) 227
BmgT120I GGNCC 7 cut(s) 198, 199, 214, 260, 285, 1810, 2242
BmiI GGNNCC 8 cut(s) 200, 216, 274, 1139, 1239, 1564, 1811, 1978
BmrFI CCNGG 4 cut(s) 328, 1142, 1690, 2576
BmrI ACTGGG 1 cut(s) 187
BmsI GCATC 4 cut(s) 1027, 1585, 1919, 2533
BmtI GCTAGC 1 cut(s) 465
BmuI ACTGGG 1 cut(s) 187
BpiI GAAGAC 5 cut(s) 1505, 1635, 1737, 1976, 2085
BplI GAGNNNNNCTC 2 cut(s) 1376, 1408
BpmI CTGGAG 4 cut(s) 310, 784, 2102, 2625
Bpu10I CCTNAGC 1 cut(s) 428
Bpu1102I GCTNAGC 1 cut(s) 498
BpuEI CTTGAG 2 cut(s) 114, 162
BpuMI CCSGG 1 cut(s) 1690
BsaAI YACGTR 1 cut(s) 2540
BsaHI GRCGYC 3 cut(s) 72, 273, 350
BsaI GGTCTC 4 cut(s) 566, 1607, 1709, 2078
BsaJI CCNNGG 3 cut(s) 142, 228, 2389
BsaWI WCCGGW 3 cut(s) 262, 1565, 1979
BsaXI ACNNNNNCTCC 4 cut(s) 1070, 1100, 2075, 2105
Bsc4I CCNNNNNNNGG 4 cut(s) 269, 282, 731, 1956
Bse118I RCCGGY 1 cut(s) 1565
Bse1I ACTGG 5 cut(s) 193, 443, 1452, 1533, 2085
Bse3DI GCAATG 2 cut(s) 749, 782
BseBI CCWGG 3 cut(s) 328, 1142, 2576
BseDI CCNNGG 3 cut(s) 142, 228, 2389
BseGI GGATG 7 cut(s) 427, 534, 640, 880, 1529, 1600, 1946
BseLI CCNNNNNNNGG 4 cut(s) 269, 282, 731, 1956
BseMI GCAATG 2 cut(s) 749, 782
BseMII CTCAG 8 cut(s) 512, 529, 577, 1181, 1374, 1618, 1641, 1720
BseNI ACTGG 5 cut(s) 193, 443, 1452, 1533, 2085
BseRI GAGGAG 3 cut(s) 175, 238, 2351
BseSI GKGCMC 1 cut(s) 202
BseYI CCCAGC 1 cut(s) 581
BsgI GTGCAG 2 cut(s) 2415, 2430
Bsh1236I CGCG 1 cut(s) 347
Bsh1285I CGRYCG 1 cut(s) 22
BshFI GGCC 6 cut(s) 147, 200, 331, 2184, 2244, 2274
BshNI GGYRCC 1 cut(s) 272
BshTI ACCGGT 1 cut(s) 1565
BsiEI CGRYCG 1 cut(s) 22
BsiHKAI GWGCWC 1 cut(s) 1394
BsiHKCI CYCGRG 1 cut(s) 227
BsiSI CCGG 4 cut(s) 263, 1566, 1690, 1980
BsiWI CGTACG 1 cut(s) 15
BslFI GGGAC 3 cut(s) 209, 1518, 1823
BslI CCNNNNNNNGG 4 cut(s) 269, 282, 731, 1956
BsmBI CGTCTC 1 cut(s) 499
BsmFI GGGAC 3 cut(s) 209, 1518, 1823
BsmI GAATGC 3 cut(s) 36, 2510, 2612
BsnI GGCC 6 cut(s) 147, 200, 331, 2184, 2244, 2274
Bso31I GGTCTC 4 cut(s) 566, 1607, 1709, 2078
BsoBI CYCGRG 1 cut(s) 227
Bsp120I GGGCCC 1 cut(s) 198
Bsp1286I GDGCHC 2 cut(s) 202, 1394
Bsp1720I GCTNAGC 1 cut(s) 498
Bsp68I TCGCGA 1 cut(s) 347
BspACI CCGC 6 cut(s) 332, 872, 1135, 1991, 2344, 2468
BspANI GGCC 6 cut(s) 147, 200, 331, 2184, 2244, 2274
BspCNI CTCAG 8 cut(s) 511, 528, 576, 1182, 1375, 1617, 1642, 1719
BspFNI CGCG 1 cut(s) 347
BspLI GGNNCC 8 cut(s) 200, 216, 274, 1139, 1239, 1564, 1811, 1978
BspMAI CTGCAG 1 cut(s) 1246
BspOI GCTAGC 1 cut(s) 465
BspPI GGATC 7 cut(s) 458, 1232, 1245, 1608, 1655, 1760, 2358
BspQI GCTCTTC 1 cut(s) 1382
BspT107I GGYRCC 1 cut(s) 272
BspTNI GGTCTC 4 cut(s) 566, 1607, 1709, 2078
BsrDI GCAATG 2 cut(s) 749, 782
BsrFI RCCGGY 1 cut(s) 1565
BsrI ACTGG 5 cut(s) 193, 443, 1452, 1533, 2085
BssAI RCCGGY 1 cut(s) 1565
BssECI CCNNGG 3 cut(s) 142, 228, 2389
BssNI GRCGYC 3 cut(s) 72, 273, 350
BssT1I CCWWGG 2 cut(s) 142, 2389
Bst2UI CCWGG 3 cut(s) 328, 1142, 2576
Bst4CI ACNGT 4 cut(s) 20, 260, 982, 2558
Bst6I CTCTTC 4 cut(s) 193, 1330, 1382, 2328
BstACI GRCGYC 3 cut(s) 72, 273, 350
BstBAI YACGTR 1 cut(s) 2540
BstC8I GCNNGC 8 cut(s) 463, 943, 1100, 1432, 2057, 2246, 2292, 2398
BstDEI CTNAG 9 cut(s) 428, 498, 515, 563, 1190, 1383, 1604, 1650, 1706
BstF5I GGATG 7 cut(s) 427, 534, 640, 880, 1529, 1600, 1946
BstFNI CGCG 1 cut(s) 347
BstH2I RGCGCY 2 cut(s) 247, 276
BstHHI GCGC 2 cut(s) 246, 275
BstMCI CGRYCG 1 cut(s) 22
BstMWI GCNNNNNNNGC 4 cut(s) 33, 144, 508, 2495
BstNI CCWGG 3 cut(s) 328, 1142, 2576
BstNSI RCATGY 1 cut(s) 398
BstSCI CCNGG 4 cut(s) 326, 1140, 1688, 2574
BstSFI CTRYAG 2 cut(s) 154, 1242
BstSLI GKGCMC 1 cut(s) 202
BstUI CGCG 1 cut(s) 347
BstV2I GAAGAC 5 cut(s) 1505, 1635, 1737, 1976, 2085
BstX2I RGATCY 5 cut(s) 1237, 1613, 1660, 1765, 2350
BstXI CCANNNNNNTGG 1 cut(s) 589
BstYI RGATCY 5 cut(s) 1237, 1613, 1660, 1765, 2350
BsuI GTATCC 1 cut(s) 2679
BsuRI GGCC 6 cut(s) 147, 200, 331, 2184, 2244, 2274
BtgZI GCGATG 1 cut(s) 639
BtsCI GGATG 7 cut(s) 427, 534, 640, 880, 1529, 1600, 1946
BtsI GCAGTG 1 cut(s) 1425
BtsIMutI CAGTG 4 cut(s) 200, 1425, 1500, 1540
BtuMI TCGCGA 1 cut(s) 347
Cac8I GCNNGC 8 cut(s) 463, 943, 1100, 1432, 2057, 2246, 2292, 2398
CaiI CAGNNNCTG 1 cut(s) 1961
CfoI GCGC 2 cut(s) 246, 275
Cfr10I RCCGGY 1 cut(s) 1565
Cfr13I GGNCC 7 cut(s) 198, 199, 214, 260, 285, 1810, 2242
CpoI CGGWCCG 1 cut(s) 260
CseI GACGC 2 cut(s) 80, 529
Csp6I GTAC 7 cut(s) 16, 780, 978, 1539, 1569, 2312, 2588
CspAI ACCGGT 1 cut(s) 1565
CspI CGGWCCG 1 cut(s) 260
CviAII CATG 8 cut(s) 395, 1110, 1129, 1477, 1940, 2309, 2632, 2679
CviQI GTAC 7 cut(s) 16, 780, 978, 1539, 1569, 2312, 2588
DdeI CTNAG 9 cut(s) 428, 498, 515, 563, 1190, 1383, 1604, 1650, 1706
DinI GGCGCC 1 cut(s) 274
DraI TTTAAA 3 cut(s) 1353, 1554, 1795
DrdI GACNNNNNNGTC 1 cut(s) 221
DseDI GACNNNNNNGTC 1 cut(s) 221
EaeI YGGCCR 2 cut(s) 2182, 2272
Eam1104I CTCTTC 4 cut(s) 193, 1330, 1382, 2328
EarI CTCTTC 4 cut(s) 193, 1330, 1382, 2328
Ecl136II GAGCTC 1 cut(s) 1392
Eco130I CCWWGG 2 cut(s) 142, 2389
Eco24I GRGCYC 2 cut(s) 202, 1394
Eco31I GGTCTC 4 cut(s) 566, 1607, 1709, 2078
Eco32I GATATC 2 cut(s) 1836, 2637
Eco47I GGWCC 4 cut(s) 214, 260, 285, 1810
Eco47III AGCGCT 1 cut(s) 245
Eco53kI GAGCTC 1 cut(s) 1392
Eco57I CTGAAG 3 cut(s) 1647, 1749, 2128
Eco88I CYCGRG 1 cut(s) 227
EcoICRI GAGCTC 1 cut(s) 1392
EcoO109I RGGNCCY 1 cut(s) 1810
EcoRII CCWGG 3 cut(s) 326, 1140, 2574
EcoRV GATATC 2 cut(s) 1836, 2637
EcoT14I CCWWGG 2 cut(s) 142, 2389
EcoT38I GRGCYC 2 cut(s) 202, 1394
EgeI GGCGCC 1 cut(s) 274
EheI GGCGCC 1 cut(s) 274
ErhI CCWWGG 2 cut(s) 142, 2389
Esp3I CGTCTC 1 cut(s) 499
FaeI CATG 8 cut(s) 398, 1113, 1132, 1480, 1943, 2312, 2635, 2682
FalI AAGNNNNNCTT 2 cut(s) 822, 854
FaqI GGGAC 3 cut(s) 209, 1518, 1823
FatI CATG 8 cut(s) 394, 1109, 1128, 1476, 1939, 2308, 2631, 2678
FbaI TGATCA 2 cut(s) 637, 2209
FblI GTMKAC 1 cut(s) 353
FokI GGATG 7 cut(s) 434, 541, 647, 887, 1516, 1607, 1933
FriOI GRGCYC 2 cut(s) 202, 1394
GlaI GCGC 2 cut(s) 245, 274
GsaI CCCAGC 1 cut(s) 585
GsuI CTGGAG 4 cut(s) 310, 784, 2102, 2625
HaeII RGCGCY 2 cut(s) 247, 276
HaeIII GGCC 6 cut(s) 147, 200, 331, 2184, 2244, 2274
HapII CCGG 4 cut(s) 263, 1566, 1690, 1980
HgaI GACGC 2 cut(s) 80, 529
HhaI GCGC 2 cut(s) 246, 275
Hin1I GRCGYC 3 cut(s) 72, 273, 350
Hin1II CATG 8 cut(s) 398, 1113, 1132, 1480, 1943, 2312, 2635, 2682
Hin6I GCGC 2 cut(s) 244, 273
HinP1I GCGC 2 cut(s) 244, 273
HincII GTYRAC 1 cut(s) 354
HindII GTYRAC 1 cut(s) 354
HindIII AAGCTT 3 cut(s) 740, 939, 2487
HpaII CCGG 4 cut(s) 263, 1566, 1690, 1980
HphI GGTGA 4 cut(s) 570, 632, 645, 893
Hpy166II GTNNAC 5 cut(s) 79, 268, 354, 400, 2254
Hpy8I GTNNAC 5 cut(s) 79, 268, 354, 400, 2254
Hpy99I CGWCG 9 cut(s) 27, 74, 86, 89, 92, 260, 352, 355, 2438
HpyCH4III ACNGT 4 cut(s) 20, 260, 982, 2558
HpyCH4IV ACGT 8 cut(s) 14, 62, 222, 350, 1184, 1696, 2539, 2624
HpyF10VI GCNNNNNNNGC 4 cut(s) 33, 144, 508, 2495
HpyF3I CTNAG 9 cut(s) 428, 498, 515, 563, 1190, 1383, 1604, 1650, 1706
HpySE526I ACGT 8 cut(s) 14, 62, 222, 350, 1184, 1696, 2539, 2624
Hsp92I GRCGYC 3 cut(s) 72, 273, 350
Hsp92II CATG 8 cut(s) 398, 1113, 1132, 1480, 1943, 2312, 2635, 2682
HspAI GCGC 2 cut(s) 244, 273
KasI GGCGCC 1 cut(s) 272
Ksp22I TGATCA 2 cut(s) 637, 2209
LguI GCTCTTC 1 cut(s) 1382
LmnI GCTCC 6 cut(s) 143, 251, 391, 996, 1137, 1397
LweI GCATC 4 cut(s) 1027, 1585, 1919, 2533
MaeII ACGT 8 cut(s) 14, 62, 222, 350, 1184, 1696, 2539, 2624
MfeI CAATTG 1 cut(s) 693
MflI RGATCY 5 cut(s) 1237, 1613, 1660, 1765, 2350
MhlI GDGCHC 2 cut(s) 202, 1394
MlsI TGGCCA 2 cut(s) 2184, 2274
MluNI TGGCCA 2 cut(s) 2184, 2274
Mly113I GGCGCC 1 cut(s) 273
MmeI TCCRAC 2 cut(s) 78, 2577
Mox20I TGGCCA 2 cut(s) 2184, 2274
MroXI GAANNNNTTC 1 cut(s) 49
MscI TGGCCA 2 cut(s) 2184, 2274
MseI TTAA 9 cut(s) 65, 165, 666, 1005, 1088, 1352, 1553, 1794, 2627
MslI CAYNNNNRTG 2 cut(s) 1475, 1554
Msp20I TGGCCA 2 cut(s) 2184, 2274
MspA1I CMGCKG 2 cut(s) 1891, 2444
MspI CCGG 4 cut(s) 263, 1566, 1690, 1980
MspR9I CCNGG 4 cut(s) 328, 1142, 1690, 2576
MunI CAATTG 1 cut(s) 693
Mva1269I GAATGC 3 cut(s) 36, 2510, 2612
MvaI CCWGG 3 cut(s) 328, 1142, 2576
MvnI CGCG 1 cut(s) 347
MwoI GCNNNNNNNGC 4 cut(s) 33, 144, 508, 2495
NarI GGCGCC 1 cut(s) 273
NciI CCSGG 1 cut(s) 1690
NheI GCTAGC 1 cut(s) 461
NlaIII CATG 8 cut(s) 398, 1113, 1132, 1480, 1943, 2312, 2635, 2682
NlaIV GGNNCC 8 cut(s) 200, 216, 274, 1139, 1239, 1564, 1811, 1978
NruI TCGCGA 1 cut(s) 347
NspI RCATGY 1 cut(s) 398
PciSI GCTCTTC 1 cut(s) 1382
PcsI WCGNNNNNNNCGW 3 cut(s) 78, 87, 96
PctI GAATGC 3 cut(s) 36, 2510, 2612
PdmI GAANNNNTTC 1 cut(s) 49
PfeI GAWTC 5 cut(s) 209, 575, 650, 1201, 1685
Pfl23II CGTACG 1 cut(s) 15
PflFI GACNNNGTC 2 cut(s) 404, 2089
PfoI TCCNGGA 1 cut(s) 1688
PinAI ACCGGT 1 cut(s) 1565
PluTI GGCGCC 1 cut(s) 276
Ppu21I YACGTR 1 cut(s) 2540
PpuMI RGGWCCY 1 cut(s) 1810
PshBI ATTAAT 1 cut(s) 666
PsiI TTATAA 1 cut(s) 1277
Psp124BI GAGCTC 1 cut(s) 1394
Psp1406I AACGTT 2 cut(s) 62, 1696
Psp5II RGGWCCY 1 cut(s) 1810
Psp6I CCWGG 3 cut(s) 326, 1140, 2574
PspFI CCCAGC 1 cut(s) 581
PspGI CCWGG 3 cut(s) 326, 1140, 2574
PspLI CGTACG 1 cut(s) 15
PspN4I GGNNCC 8 cut(s) 200, 216, 274, 1139, 1239, 1564, 1811, 1978
PspOMI GGGCCC 1 cut(s) 198
PspPI GGNCC 7 cut(s) 198, 199, 214, 260, 285, 1810, 2242
PspPPI RGGWCCY 1 cut(s) 1810
PsrI GAACNNNNNNTAC 2 cut(s) 1960, 1992
PstI CTGCAG 1 cut(s) 1246
PstNI CAGNNNCTG 1 cut(s) 1961
PsuI RGATCY 5 cut(s) 1237, 1613, 1660, 1765, 2350
PsyI GACNNNGTC 2 cut(s) 404, 2089
PvuII CAGCTG 2 cut(s) 1891, 2444
RruI TCGCGA 1 cut(s) 347
RsaI GTAC 7 cut(s) 17, 781, 979, 1540, 1570, 2313, 2589
RsaNI GTAC 7 cut(s) 16, 780, 978, 1539, 1569, 2312, 2588
RseI CAYNNNNRTG 2 cut(s) 1475, 1554
Rsr2I CGGWCCG 1 cut(s) 260
RsrII CGGWCCG 1 cut(s) 260
SacI GAGCTC 1 cut(s) 1394
SalI GTCGAC 1 cut(s) 352
SapI GCTCTTC 1 cut(s) 1382
SaqAI TTAA 9 cut(s) 65, 165, 666, 1005, 1088, 1352, 1553, 1794, 2627
Sau96I GGNCC 7 cut(s) 198, 199, 214, 260, 285, 1810, 2242
SbfI CCTGCAGG 1 cut(s) 1246
ScrFI CCNGG 4 cut(s) 328, 1142, 1690, 2576
SdaI CCTGCAGG 1 cut(s) 1246
SduI GDGCHC 2 cut(s) 202, 1394
SfaNI GCATC 4 cut(s) 1027, 1585, 1919, 2533
SfcI CTRYAG 2 cut(s) 154, 1242
SfoI GGCGCC 1 cut(s) 274
SinI GGWCC 4 cut(s) 214, 260, 285, 1810
SmiI ATTTAAAT 1 cut(s) 1554
SmiMI CAYNNNNRTG 2 cut(s) 1475, 1554
SmlI CTYRAG 2 cut(s) 129, 177
SmoI CTYRAG 2 cut(s) 129, 177
Sse8387I CCTGCAGG 1 cut(s) 1246
SsiI CCGC 6 cut(s) 332, 872, 1135, 1991, 2344, 2468
SspDI GGCGCC 1 cut(s) 272
SspI AATATT 1 cut(s) 1291
SstI GAGCTC 1 cut(s) 1394
StyD4I CCNGG 4 cut(s) 326, 1140, 1688, 2574
StyI CCWWGG 2 cut(s) 142, 2389
SwaI ATTTAAAT 1 cut(s) 1554
TaaI ACNGT 4 cut(s) 20, 260, 982, 2558
TaiI ACGT 8 cut(s) 17, 65, 225, 353, 1187, 1699, 2542, 2627
TaqI TCGA 4 cut(s) 255, 304, 353, 546
TauI GCSGC 2 cut(s) 334, 2346
TfiI GAWTC 5 cut(s) 209, 575, 650, 1201, 1685
Tru1I TTAA 9 cut(s) 65, 165, 666, 1005, 1088, 1352, 1553, 1794, 2627
Tru9I TTAA 9 cut(s) 65, 165, 666, 1005, 1088, 1352, 1553, 1794, 2627
TscAI CASTG 4 cut(s) 200, 1432, 1500, 1540
TspDTI ATGAA 6 cut(s) 1238, 1356, 1518, 1797, 2039, 2297
TspGWI ACGGA 2 cut(s) 751, 1045
TspRI CASTG 4 cut(s) 200, 1432, 1500, 1540
Tth111I GACNNNGTC 2 cut(s) 404, 2089
VpaK11BI GGWCC 4 cut(s) 214, 260, 285, 1810
VspI ATTAAT 1 cut(s) 666
XapI RAATTY 3 cut(s) 374, 834, 1318
XceI RCATGY 1 cut(s) 398
XcmI CCANNNNNNNNNTGG 1 cut(s) 2077
XmiI GTMKAC 1 cut(s) 353
XmnI GAANNNNTTC 1 cut(s) 49
ZraI GACGTC 1 cut(s) 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.