Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009354

Physical Location & Seq

Genomic Coordinates Reverse (-)

5022742 .. 5029768

Gene Structure 7027 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ28891

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2664 bp

ATGATTGTGAGGACCTACGGCCGGCGCAAGGGAGGAGGACCAGTAGGCCTTCCCAGGACCTATTCCGACTCAACCCTAAACGACGCCGTTCGCGGCGACGACGACGACGACCTCAGCAACGACCCGTTTAGAATCTCTCTCTCCCAAGATACCCCCCAATTCAATTTTAATTTCTCGTCGTCGCAAGACTCGTCGTCGCAGTGGTCGCAGTTCGATTCGGAGCCCTATCCCCCCGAATTGAAAAGGCCCAGTTCGCGAAACGGCGACGTTTTGAGGAGGCCGTCGAAGAAGGCGAAGAAGGCCGCGGCGGCGCTTGCGACGGCGACGTTGATGGAGGCGCAGGAGTTCGGGGAGATGATGGAGCATGTGGACGAGGTCAATTTCGCGCTGGATGGGCTGAGGAATGGTCAGCCGGTTCGGATCAGAAGGGCGAGCTTGTTGTCTTTGTTGGGGATTTGTGGCACGCCGCAGCAGAGACGGCTTCTGAGGACTCAGGGGTGGATGGCAAAAACGATAATTGAGGCTATATTGGGTCTCAGTTTTGATGATACACCTAGCGATCTGGCTGCTGCAACTATTTTCTATGTTTTGACTTGTGATGGTCAGGATGATCCTCTTTTGGAATCACCAAGCTGTATTAATTTTTTGATTAGGTTTTGCAAACCAATTGTCTCAAACATCACTGAAGATAAAGCACCAAAAATTGGACGAAAGCTTTTAGCATTGCGTTTGAGTGCTGACATCTCGCATTGTGCACCAAAAAGATTAGACTCCAGCTCGGCTGCTATTCTTTCCAAAGTACATGAGATTCTTGTTACTTGCAAGGAAATGACACCAAGTTCTGCTGATGATGGTGAAATGAGCATGCCGGAGTTAAGCCCCAAATGGATAGCTTTGCTTACTATGGAGAAAGCTTGCTTATCTACTATTTCTCTTGAAGAAACAACTGGTACAGTAAGGAAGGCTGGGGGCAACTTTAAGGAAAAATTACGAGAGCTTGGAGGCCTTGATGCTGTTTTTGAGGTGTCCATGACTTGCCATTCCGAAATGGAGGGTTGGCTAAAAGGTAATTCTCCTTCTACTTGGGAAAAGGAAATCAACATGGTGCGGAGCCTGGTTCTGCTTTTGAAATGCTTGAAGATCATGGAAAATGCCACATTCTTGAGTAAAGAAAATCAGAGCCACTTGCTAGAAATGAAAGGAAAGTTGGATCCCATGGAAAAGCCCATATCTTTCACAGAACTTGTTATAAGTACCATCAGTATCCTATCAGGGCTTTATCTACATAAAAGTTTATCTGCTGCTTCCAATGATGACATGTCTCATAATCTTTCAAATGGGAATGAATATGCTTCTGAGGAAAGCTCCCACAAATGTCAGAGCAATGGATTGGTGTCCACTTCTCGCTCGGTGTTTTCTGTATCCAATTCAGAAACTACCAGCACGTCTATGACTGACACCTATTTGTTGAAGACAAGACTTAGTTCTTCCAGAAATGGCTCATCTAGTGGTACAGCAAGCCATTTAAGTGAGGCAACCCGCACATTTAGCTATGGTTCCCGGAAAGATGCTGGTTCCAGTCAGAGATCCTATATTTCTAAAAACTCTATTATTGATCTTTCGGAGGAGAGCCAAGATCCTTTTGCATTTAGCTGTGGTTCCGGTGAGGATGCTGGTCTCAGTCAGAGATCCTATATTTCTGAAGACTCTAAAGTTGACCTTTCACAGGAGAGTCAAGATCCTTTTGCATTTGATGAAGATGATATTGAACCTTCTCAGTGGGACATATTATCTGGCAAGAAAAAGATTTGTCGAACGCGAAAAAATGGAGAAGCTTACAGAGAACTTGATGATGGTTGCCAGTTGCAGCTGATTATGAGCCAAGCAGAATCAAGTTTTGGGGAAGACCATGATATGCCTGAGACATCCTATGCGGGTGCTGTTAGTAAAGAGGGTTCCAGTCTTTTGGCTGACTGCCTTCTTACTGCTGTTAAGGTGCTGATGAACTTGGCAAATGAGAATCCTGTTGGTTGTCAGCAAATTGCTGCAAATGGAGGACTGGAGACCATGTCTTCCTTGATTGCTAGCCACTTTCCTTCATTTTCATCTCCATTCAGCGAGAGAAATGACAATACTTCAAGCATTGAACTGGATAATCAGAATGGTAGACATCTTACCGATCAAGAGCTAGATTTTCTTGTAGCTATTTTGGGCCTGCTTGTAAACTTGGTTGAGAAAGATGGTCAAAACAGATCACGGCTCGCTGCAGTCACTGTTCACTTACCTATTTCTGATGGGTTTGAAGAGGAAAGTCACAAGGATCTAATTCTGCTAATATGCTCTATATTCCTGGCTAATCAAGGTGCAGGCGAGGGATCCGAAGAAGGAAAAACTTTGCCAAATGATGAGGCAGCTGTGTTACAAGGAGAACAAGAAGCTGAGAAAATGATAGTGGAAGCTTATGCTGCCCTGCTTTTAGCATTCCTTTCAACTGAAAGTAAGGGTGTACGCGATGCCATTGCTGACTGTCTCCCAGATCGCAACCTGGCTATCCTAGTACCTGTGTTGGACAGATTTGTGGCATTTCACTTGACGTTAAACATGATCTCACCGGAGACTCATAAAGTCGTAAGTGAAGTAATTGAATCATGTAGGATACGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WAPL

Protein Analysis

887

Amino Acids

96.99

Weight (kDa)

4.94

Isoelectric Point (pI)

54.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WAPL	PF07814	109 - 478	7.4e-44	Wings apart-like protein regulation of heterochromatin
WAPL	PF07814	648 - 748	9.8e-06	Wings apart-like protein regulation of heterochromatin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0009354)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11060 AT1G61030
fragaria_vesca	FvH4_3g04800 FvH4_3g04800
malus_domestica	MD05G1316600.v1.1 MD10G1297100.v1.1
prunus_persica	Prupe.4G043300_v2.0.a1 Prupe.4G043300_v2.0.a1 Prupe.4G043300_v2.0.a1
pyrus_communis	pycom05g29370 pycom10g25000
rosa_chinensis	RchiOBHm_Chr5g0007891
rosa_laevigata	RLG00000031502
rosa_multiflora	Rmu_sc0005098.1_g000006
rosa_roxburghii	Rroxscaffold_1G00068540
rosa_rugosa	Rorug04G0430900
rosa_samantha	Rh5AG059800 Rh5BG056700 Rh5CG066500 Rh5DG055700 Rh7CG256700
rosa_wichuraiana	Rw5G006040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1250
AccB7I	CCANNNNNTGG	1 cut(s)	704
AccI	GTMKAC	1 cut(s)	2167
AccII	CGCG	6 cut(s)	93, 256, 305, 386, 1819, 2511
AciI	CCGC	8 cut(s)	93, 303, 305, 308, 467, 1108, 1540, 1934
AcoI	YGGCCR	1 cut(s)	19
AcuI	CTGAAG	2 cut(s)	705, 1722
AcyI	GRCGYC	1 cut(s)	84
AfaI	GTAC	6 cut(s)	801, 952, 1255, 1513, 2508, 2559
AfiI	CCNNNNNNNGG	4 cut(s)	21, 28, 704, 1726
AflIII	ACRYGT	1 cut(s)	1317
AhdI	GACNNNNNGTC	1 cut(s)	193
AjiI	CACGTC	1 cut(s)	1446
AjnI	CCWGG	4 cut(s)	53, 1113, 2349, 2544
AjuI	GAANNNNNNNTTGG	4 cut(s)	1190, 1222, 1881, 1913
Alw21I	GWGCWC	1 cut(s)	757
Alw26I	GTCTC	9 cut(s)	469, 539, 676, 1326, 1682, 1916, 2057, 2534, 2609
Alw44I	GTGCAC	1 cut(s)	753
AlwNI	CAGNNNCTG	1 cut(s)	2273
AoxI	GGCC	7 cut(s)	19, 46, 245, 278, 300, 1003, 2212
ApaLI	GTGCAC	1 cut(s)	753
ArsI	GACNNNNNNTTYG	2 cut(s)	654, 686
AseI	ATTAAT	1 cut(s)	639
AspLEI	GCGC	4 cut(s)	27, 313, 340, 388
AspS9I	GGNCC	5 cut(s)	12, 38, 57, 246, 2212
AsuC2I	CCSGG	1 cut(s)	1561
AsuHPI	GGTGA	4 cut(s)	618, 866, 1676, 2601
AsuNHI	GCTAGC	1 cut(s)	2084
AvaII	GGWCC	3 cut(s)	12, 38, 57
BaeGI	GKGCMC	1 cut(s)	757
BamHI	GGATCC	2 cut(s)	1210, 2375
BanII	GRGCYC	1 cut(s)	225
BarI	GAAGNNNNNNTAC	2 cut(s)	1060, 1092
BbsI	GAAGAC	4 cut(s)	1478, 1710, 1911, 2064
Bbv12I	GWGCWC	1 cut(s)	757
BbvCI	CCTCAGC	2 cut(s)	113, 398
BceAI	ACGGC	7 cut(s)	34, 71, 265, 277, 336, 494, 2273
BcgI	CGANNNNNNTGC	4 cut(s)	548, 582, 2501, 2535
BciT130I	CCWGG	4 cut(s)	55, 1115, 2351, 2546
BciVI	GTATCC	3 cut(s)	1274, 1432, 2649
BcnI	CCSGG	1 cut(s)	1561
BcoDI	GTCTC	9 cut(s)	469, 539, 676, 1326, 1682, 1916, 2057, 2534, 2609
BfaI	CTAG	6 cut(s)	555, 1190, 1506, 2085, 2189, 2555
BfmI	CTRYAG	1 cut(s)	2265
BfoI	RGCGCY	1 cut(s)	314
BfuI	GTATCC	3 cut(s)	1274, 1432, 2649
BglI	GCCNNNNNGGC	1 cut(s)	308
Bme1390I	CCNGG	5 cut(s)	55, 1115, 1561, 2351, 2546
Bme18I	GGWCC	3 cut(s)	12, 38, 57
BmeRI	GACNNNNNGTC	1 cut(s)	193
BmgBI	CACGTC	1 cut(s)	1446
BmgT120I	GGNCC	5 cut(s)	12, 38, 57, 246, 2212
BmiI	GGNNCC	8 cut(s)	222, 1112, 1212, 1558, 1576, 1660, 1957, 2377
BmrFI	CCNGG	5 cut(s)	55, 1115, 1561, 2351, 2546
BmrI	ACTGGG	1 cut(s)	243
BmsI	GCATC	4 cut(s)	1000, 1558, 1660, 2503
BmtI	GCTAGC	1 cut(s)	2088
BmuI	ACTGGG	1 cut(s)	243
BpiI	GAAGAC	4 cut(s)	1478, 1710, 1911, 2064
BplI	GAGNNNNNCTC	2 cut(s)	1349, 1381
BpmI	CTGGAG	2 cut(s)	757, 2081
Bpu10I	CCTNAGC	2 cut(s)	113, 398
BpuEI	CTTGAG	1 cut(s)	1183
BpuMI	CCSGG	1 cut(s)	1561
BsaHI	GRCGYC	1 cut(s)	84
BsaI	GGTCTC	3 cut(s)	539, 1682, 2057
BsaJI	CCNNGG	3 cut(s)	53, 303, 1215
BsaWI	WCCGGW	2 cut(s)	1661, 2611
BsaXI	ACNNNNNCTCC	4 cut(s)	27, 57, 2054, 2084
Bsc4I	CCNNNNNNNGG	4 cut(s)	21, 28, 704, 1726
Bse118I	RCCGGY	2 cut(s)	21, 412
Bse1I	ACTGG	8 cut(s)	41, 249, 952, 1578, 1861, 1959, 2064, 2154
Bse3DI	GCAATG	3 cut(s)	722, 1390, 2517
BseBI	CCWGG	4 cut(s)	55, 1115, 2351, 2546
BseDI	CCNNGG	3 cut(s)	53, 303, 1215
BseGI	GGATG	5 cut(s)	397, 507, 613, 1675, 1925
BseLI	CCNNNNNNNGG	4 cut(s)	21, 28, 704, 1726
BseMI	GCAATG	3 cut(s)	722, 1390, 2517
BseNI	ACTGG	8 cut(s)	41, 249, 952, 1578, 1861, 1959, 2064, 2154
BseRI	GAGGAG	3 cut(s)	48, 289, 1640
BseSI	GKGCMC	1 cut(s)	757
BseX3I	CGGCCG	1 cut(s)	19
BseYI	CCCAGC	1 cut(s)	965
BsgI	GTGCAG	1 cut(s)	2385
Bsh1236I	CGCG	6 cut(s)	93, 256, 305, 386, 1819, 2511
Bsh1285I	CGRYCG	1 cut(s)	22
BshFI	GGCC	7 cut(s)	21, 48, 247, 280, 302, 1005, 2214
BsiEI	CGRYCG	1 cut(s)	22
BsiHKAI	GWGCWC	1 cut(s)	757
BsiSI	CCGG	6 cut(s)	22, 413, 869, 1561, 1662, 2612
BslFI	GGGAC	1 cut(s)	1796
BslI	CCNNNNNNNGG	4 cut(s)	21, 28, 704, 1726
BsmAI	GTCTC	9 cut(s)	469, 539, 676, 1326, 1682, 1916, 2057, 2534, 2609
BsmBI	CGTCTC	1 cut(s)	469
BsmFI	GGGAC	1 cut(s)	1796
BsmI	GAATGC	1 cut(s)	2480
BsnI	GGCC	7 cut(s)	21, 48, 247, 280, 302, 1005, 2214
Bso31I	GGTCTC	3 cut(s)	539, 1682, 2057
Bsp1286I	GDGCHC	2 cut(s)	225, 757
Bsp19I	CCATGG	1 cut(s)	1215
Bsp68I	TCGCGA	1 cut(s)	256
BspACI	CCGC	8 cut(s)	93, 303, 305, 308, 467, 1108, 1540, 1934
BspANI	GGCC	7 cut(s)	21, 48, 247, 280, 302, 1005, 2214
BspFNI	CGCG	6 cut(s)	93, 256, 305, 386, 1819, 2511
BspLI	GGNNCC	8 cut(s)	222, 1112, 1212, 1558, 1576, 1660, 1957, 2377
BspMAI	CTGCAG	1 cut(s)	2269
BspOI	GCTAGC	1 cut(s)	2088
BspTNI	GGTCTC	3 cut(s)	539, 1682, 2057
BsrDI	GCAATG	3 cut(s)	722, 1390, 2517
BsrFI	RCCGGY	2 cut(s)	21, 412
BsrI	ACTGG	8 cut(s)	41, 249, 952, 1578, 1861, 1959, 2064, 2154
BssAI	RCCGGY	2 cut(s)	21, 412
BssECI	CCNNGG	3 cut(s)	53, 303, 1215
BssNI	GRCGYC	1 cut(s)	84
BssT1I	CCWWGG	1 cut(s)	1215
Bst2UI	CCWGG	4 cut(s)	55, 1115, 2351, 2546
Bst4CI	ACNGT	3 cut(s)	955, 2275, 2528
Bst6I	CTCTTC	1 cut(s)	2298
BstACI	GRCGYC	1 cut(s)	84
BstDSI	CCRYGG	2 cut(s)	303, 1215
BstENI	CCTNNNNNAGG	1 cut(s)	1724
BstF5I	GGATG	5 cut(s)	397, 507, 613, 1675, 1925
BstFNI	CGCG	6 cut(s)	93, 256, 305, 386, 1819, 2511
BstH2I	RGCGCY	1 cut(s)	314
BstHHI	GCGC	4 cut(s)	27, 313, 340, 388
BstMAI	GTCTC	9 cut(s)	469, 539, 676, 1326, 1682, 1916, 2057, 2534, 2609
BstMCI	CGRYCG	1 cut(s)	22
BstMWI	GCNNNNNNNGC	9 cut(s)	205, 253, 299, 308, 314, 394, 478, 1548, 2465
BstNI	CCWGG	4 cut(s)	55, 1115, 2351, 2546
BstNSI	RCATGY	3 cut(s)	368, 868, 1321
BstSCI	CCNGG	5 cut(s)	53, 1113, 1559, 2349, 2544
BstSFI	CTRYAG	1 cut(s)	2265
BstSLI	GKGCMC	1 cut(s)	757
BstUI	CGCG	6 cut(s)	93, 256, 305, 386, 1819, 2511
BstV2I	GAAGAC	4 cut(s)	1478, 1710, 1911, 2064
BstX2I	RGATCY	7 cut(s)	1210, 1586, 1636, 1688, 1738, 2320, 2375
BstXI	CCANNNNNNTGG	1 cut(s)	1966
BstYI	RGATCY	7 cut(s)	1210, 1586, 1636, 1688, 1738, 2320, 2375
BstZI	CGGCCG	1 cut(s)	19
BsuI	GTATCC	3 cut(s)	1274, 1432, 2649
BsuRI	GGCC	7 cut(s)	21, 48, 247, 280, 302, 1005, 2214
BtgI	CCRYGG	2 cut(s)	303, 1215
BtgZI	GCGATG	1 cut(s)	2526
BtrI	CACGTC	1 cut(s)	1446
BtsCI	GGATG	5 cut(s)	397, 507, 613, 1675, 1925
BtsI	GCAGTG	1 cut(s)	206
BtsIMutI	CAGTG	4 cut(s)	206, 681, 1784, 2271
BtuMI	TCGCGA	1 cut(s)	256
CaiI	CAGNNNCTG	1 cut(s)	2273
CfoI	GCGC	4 cut(s)	27, 313, 340, 388
Cfr10I	RCCGGY	2 cut(s)	21, 412
Cfr13I	GGNCC	5 cut(s)	12, 38, 57, 246, 2212
Cfr42I	CCGCGG	1 cut(s)	306
CseI	GACGC	1 cut(s)	92
Csp6I	GTAC	6 cut(s)	800, 951, 1254, 1512, 2507, 2558
CviQI	GTAC	6 cut(s)	800, 951, 1254, 1512, 2507, 2558
DriI	GACNNNNNGTC	1 cut(s)	193
EaeI	YGGCCR	1 cut(s)	19
EagI	CGGCCG	1 cut(s)	19
Eam1104I	CTCTTC	1 cut(s)	2298
Eam1105I	GACNNNNNGTC	1 cut(s)	193
EarI	CTCTTC	1 cut(s)	2298
EclXI	CGGCCG	1 cut(s)	19
Eco130I	CCWWGG	1 cut(s)	1215
Eco147I	AGGCCT	2 cut(s)	48, 1005
Eco24I	GRGCYC	1 cut(s)	225
Eco31I	GGTCTC	3 cut(s)	539, 1682, 2057
Eco47I	GGWCC	3 cut(s)	12, 38, 57
Eco52I	CGGCCG	1 cut(s)	19
Eco57I	CTGAAG	2 cut(s)	705, 1722
EcoNI	CCTNNNNNAGG	1 cut(s)	1724
EcoO109I	RGGNCCY	2 cut(s)	12, 57
EcoRII	CCWGG	4 cut(s)	53, 1113, 2349, 2544
EcoT14I	CCWWGG	1 cut(s)	1215
EcoT38I	GRGCYC	1 cut(s)	225
ErhI	CCWWGG	1 cut(s)	1215
Esp3I	CGTCTC	1 cut(s)	469
FalI	AAGNNNNNCTT	2 cut(s)	1704, 1736
FaqI	GGGAC	1 cut(s)	1796
FauI	CCCGC	2 cut(s)	1547, 1927
FblI	GTMKAC	1 cut(s)	2167
FokI	GGATG	5 cut(s)	404, 514, 620, 1682, 1912
FriOI	GRGCYC	1 cut(s)	225
FspBI	CTAG	6 cut(s)	555, 1190, 1506, 2085, 2189, 2555
GlaI	GCGC	4 cut(s)	26, 312, 339, 387
GsaI	CCCAGC	1 cut(s)	969
GsuI	CTGGAG	2 cut(s)	757, 2081
HaeII	RGCGCY	1 cut(s)	314
HaeIII	GGCC	7 cut(s)	21, 48, 247, 280, 302, 1005, 2214
HapII	CCGG	6 cut(s)	22, 413, 869, 1561, 1662, 2612
HgaI	GACGC	1 cut(s)	92
HhaI	GCGC	4 cut(s)	27, 313, 340, 388
Hin1I	GRCGYC	1 cut(s)	84
Hin6I	GCGC	4 cut(s)	25, 311, 338, 386
HinP1I	GCGC	4 cut(s)	25, 311, 338, 386
HincII	GTYRAC	1 cut(s)	1717
HindII	GTYRAC	1 cut(s)	1717
HindIII	AAGCTT	4 cut(s)	713, 912, 1833, 2457
HpaII	CCGG	6 cut(s)	22, 413, 869, 1561, 1662, 2612
HphI	GGTGA	4 cut(s)	618, 866, 1676, 2601
Hpy166II	GTNNAC	8 cut(s)	370, 755, 1398, 1717, 2168, 2224, 2278, 2507
Hpy188III	TCNNGA	7 cut(s)	255, 605, 935, 1162, 1491, 1736, 2183
Hpy8I	GTNNAC	8 cut(s)	370, 755, 1398, 1717, 2168, 2224, 2278, 2507
HpyCH4III	ACNGT	3 cut(s)	955, 2275, 2528
HpyCH4IV	ACGT	4 cut(s)	267, 326, 1445, 2594
HpyF10VI	GCNNNNNNNGC	9 cut(s)	205, 253, 299, 308, 314, 394, 478, 1548, 2465
HpySE526I	ACGT	4 cut(s)	267, 326, 1445, 2594
Hsp92I	GRCGYC	1 cut(s)	84
HspAI	GCGC	4 cut(s)	25, 311, 338, 386
KroI	GCCGGC	1 cut(s)	21
KroNI	GCCGGC	1 cut(s)	23
KspI	CCGCGG	1 cut(s)	306
LmnI	GCTCC	4 cut(s)	220, 361, 1110, 1370
LweI	GCATC	4 cut(s)	1000, 1558, 1660, 2503
MaeI	CTAG	6 cut(s)	555, 1190, 1506, 2085, 2189, 2555
MaeII	ACGT	4 cut(s)	267, 326, 1445, 2594
MaeIII	GTNAC	4 cut(s)	814, 2269, 2312, 2418
MfeI	CAATTG	1 cut(s)	666
MflI	RGATCY	7 cut(s)	1210, 1586, 1636, 1688, 1738, 2320, 2375
MhlI	GDGCHC	2 cut(s)	225, 757
MlyI	GAGTC	7 cut(s)	62, 182, 484, 764, 1700, 1741, 2611
MmeI	TCCRAC	3 cut(s)	90, 1188, 2547
MroNI	GCCGGC	1 cut(s)	21
MseI	TTAA	7 cut(s)	168, 639, 875, 978, 1526, 1992, 2597
MslI	CAYNNNNRTG	2 cut(s)	1448, 1527
MspA1I	CMGCKG	3 cut(s)	305, 1870, 2414
MspI	CCGG	6 cut(s)	22, 413, 869, 1561, 1662, 2612
MspR9I	CCNGG	5 cut(s)	55, 1115, 1561, 2351, 2546
MunI	CAATTG	1 cut(s)	666
Mva1269I	GAATGC	1 cut(s)	2480
MvaI	CCWGG	4 cut(s)	55, 1115, 2351, 2546
MvnI	CGCG	6 cut(s)	93, 256, 305, 386, 1819, 2511
MwoI	GCNNNNNNNGC	9 cut(s)	205, 253, 299, 308, 314, 394, 478, 1548, 2465
NaeI	GCCGGC	1 cut(s)	23
NciI	CCSGG	1 cut(s)	1561
NcoI	CCATGG	1 cut(s)	1215
NgoMIV	GCCGGC	1 cut(s)	21
NheI	GCTAGC	1 cut(s)	2084
NlaIV	GGNNCC	8 cut(s)	222, 1112, 1212, 1558, 1576, 1660, 1957, 2377
NmeAIII	GCCGAG	1 cut(s)	758
NmuCI	GTSAC	2 cut(s)	2269, 2312
NruI	TCGCGA	1 cut(s)	256
NspI	RCATGY	3 cut(s)	368, 868, 1321
PaeI	GCATGC	1 cut(s)	868
PceI	AGGCCT	2 cut(s)	48, 1005
PciI	ACATGT	1 cut(s)	1317
PcsI	WCGNNNNNNNCGW	3 cut(s)	105, 188, 290
PctI	GAATGC	1 cut(s)	2480
PdiI	GCCGGC	1 cut(s)	23
PfeI	GAWTC	7 cut(s)	132, 215, 623, 808, 1889, 2020, 2645
PflFI	GACNNNGTC	2 cut(s)	374, 2068
PflMI	CCANNNNNTGG	1 cut(s)	704
PfoI	TCCNGGA	1 cut(s)	1559
PleI	GAGTC	7 cut(s)	62, 182, 484, 764, 1700, 1740, 2611
PpsI	GAGTC	7 cut(s)	62, 182, 484, 764, 1700, 1740, 2611
PpuMI	RGGWCCY	2 cut(s)	12, 57
PscI	ACATGT	1 cut(s)	1317
PshBI	ATTAAT	1 cut(s)	639
PsiI	TTATAA	1 cut(s)	1250
Psp5II	RGGWCCY	2 cut(s)	12, 57
Psp6I	CCWGG	4 cut(s)	53, 1113, 2349, 2544
PspFI	CCCAGC	1 cut(s)	965
PspGI	CCWGG	4 cut(s)	53, 1113, 2349, 2544
PspN4I	GGNNCC	8 cut(s)	222, 1112, 1212, 1558, 1576, 1660, 1957, 2377
PspPI	GGNCC	5 cut(s)	12, 38, 57, 246, 2212
PspPPI	RGGWCCY	2 cut(s)	12, 57
PsrI	GAACNNNNNNTAC	2 cut(s)	1939, 1971
PstI	CTGCAG	1 cut(s)	2269
PstNI	CAGNNNCTG	1 cut(s)	2273
PsuI	RGATCY	7 cut(s)	1210, 1586, 1636, 1688, 1738, 2320, 2375
PsyI	GACNNNGTC	2 cut(s)	374, 2068
PvuII	CAGCTG	2 cut(s)	1870, 2414
RruI	TCGCGA	1 cut(s)	256
RsaI	GTAC	6 cut(s)	801, 952, 1255, 1513, 2508, 2559
RsaNI	GTAC	6 cut(s)	800, 951, 1254, 1512, 2507, 2558
RseI	CAYNNNNRTG	2 cut(s)	1448, 1527
SacII	CCGCGG	1 cut(s)	306
SaqAI	TTAA	7 cut(s)	168, 639, 875, 978, 1526, 1992, 2597
Sau96I	GGNCC	5 cut(s)	12, 38, 57, 246, 2212
SchI	GAGTC	7 cut(s)	62, 182, 484, 764, 1700, 1741, 2611
ScrFI	CCNGG	5 cut(s)	55, 1115, 1561, 2351, 2546
SduI	GDGCHC	2 cut(s)	225, 757
SfaNI	GCATC	4 cut(s)	1000, 1558, 1660, 2503
SfcI	CTRYAG	1 cut(s)	2265
Sfr303I	CCGCGG	1 cut(s)	306
SgrBI	CCGCGG	1 cut(s)	306
SinI	GGWCC	3 cut(s)	12, 38, 57
SmiMI	CAYNNNNRTG	2 cut(s)	1448, 1527
SmlI	CTYRAG	1 cut(s)	1162
SmoI	CTYRAG	1 cut(s)	1162
SphI	GCATGC	1 cut(s)	868
SseBI	AGGCCT	2 cut(s)	48, 1005
SsiI	CCGC	8 cut(s)	93, 303, 305, 308, 467, 1108, 1540, 1934
SspMI	CTAG	6 cut(s)	555, 1190, 1506, 2085, 2189, 2555
StuI	AGGCCT	2 cut(s)	48, 1005
StyD4I	CCNGG	5 cut(s)	53, 1113, 1559, 2349, 2544
StyI	CCWWGG	1 cut(s)	1215
TaaI	ACNGT	3 cut(s)	955, 2275, 2528
TaiI	ACGT	4 cut(s)	270, 329, 1448, 2597
TaqI	TCGA	3 cut(s)	213, 284, 1813
TatI	WGTACW	1 cut(s)	799
TauI	GCSGC	5 cut(s)	96, 305, 308, 311, 469
TfiI	GAWTC	7 cut(s)	132, 215, 623, 808, 1889, 2020, 2645
Tru1I	TTAA	7 cut(s)	168, 639, 875, 978, 1526, 1992, 2597
Tru9I	TTAA	7 cut(s)	168, 639, 875, 978, 1526, 1992, 2597
TscAI	CASTG	4 cut(s)	206, 688, 1784, 2278
TseFI	GTSAC	2 cut(s)	2269, 2312
Tsp45I	GTSAC	2 cut(s)	2269, 2312
TspDTI	ATGAA	6 cut(s)	1211, 1359, 1770, 2018, 2088, 2094
TspRI	CASTG	4 cut(s)	206, 688, 1784, 2278
Tth111I	GACNNNGTC	2 cut(s)	374, 2068
Van91I	CCANNNNNTGG	1 cut(s)	704
VneI	GTGCAC	1 cut(s)	753
VpaK11BI	GGWCC	3 cut(s)	12, 38, 57
VspI	ATTAAT	1 cut(s)	639
XagI	CCTNNNNNAGG	1 cut(s)	1724
XceI	RCATGY	3 cut(s)	368, 868, 1321
XmiI	GTMKAC	1 cut(s)	2167
XspI	CTAG	6 cut(s)	555, 1190, 1506, 2085, 2189, 2555

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.