Wings apart-like protein regulation of heterochromatin
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11060 AT1G61030 |
| fragaria_vesca | FvH4_3g04800 FvH4_3g04800 |
| malus_domestica | MD05G1316600.v1.1 MD10G1297100.v1.1 |
| prunus_persica | Prupe.4G043300_v2.0.a1 Prupe.4G043300_v2.0.a1 Prupe.4G043300_v2.0.a1 |
| pyrus_communis | pycom05g29370 pycom10g25000 |
| rosa_chinensis | RchiOBHm_Chr5g0007891 |
| rosa_laevigata | RLG00000031502 |
| rosa_multiflora | Rmu_sc0005098.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00068540 |
| rosa_rugosa | Rorug04G0430900 |
| rosa_samantha | Rh5AG059800 Rh5BG056700 Rh5CG066500 Rh5DG055700 Rh7CG256700 |
| rosa_wichuraiana | Rw5G006040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 392, 909 |
| AccI | GTMKAC | 2 cut(s) | 557, 1657 |
| AccII | CGCG | 1 cut(s) | 1408 |
| AciI | CCGC | 4 cut(s) | 250, 1128, 1589, 1690 |
| AclWI | GGATC | 8 cut(s) | 347, 360, 501, 723, 773, 825, 875, 1479 |
| AcoI | YGGCCR | 1 cut(s) | 1393 |
| AcsI | RAATTY | 1 cut(s) | 686 |
| AcuI | CTGAAG | 1 cut(s) | 1249 |
| AfaI | GTAC | 1 cut(s) | 1710 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 551, 1696 |
| AflIII | ACRYGT | 1 cut(s) | 490 |
| AgsI | TTSAA | 8 cut(s) | 80, 271, 280, 488, 613, 1246, 1641, 1796 |
| AjnI | CCWGG | 3 cut(s) | 255, 803, 1695 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 332, 364 |
| Alw26I | GTCTC | 5 cut(s) | 476, 1058, 1328, 1685, 1760 |
| AlwI | GGATC | 8 cut(s) | 347, 360, 501, 723, 773, 825, 875, 1479 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1082 |
| Ama87I | CYCGRG | 1 cut(s) | 1763 |
| AoxI | GGCC | 2 cut(s) | 1363, 1393 |
| ApeKI | GCWGC | 5 cut(s) | 1009, 1187, 1415, 1418, 1562 |
| ApoI | RAATTY | 1 cut(s) | 686 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 640, 947 |
| AspLEI | GCGC | 1 cut(s) | 95 |
| AsuHPI | GGTGA | 1 cut(s) | 178 |
| AvaI | CYCGRG | 1 cut(s) | 1763 |
| BalI | TGGCCA | 1 cut(s) | 1395 |
| BamHI | GGATCC | 1 cut(s) | 352 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1267, 1299 |
| BauI | CACGAG | 1 cut(s) | 703 |
| BbsI | GAAGAC | 3 cut(s) | 620, 860, 1206 |
| BbvI | GCAGC | 5 cut(s) | 1021, 1174, 1427, 1430, 1574 |
| BccI | CCATC | 6 cut(s) | 407, 802, 1059, 1246, 1314, 1385 |
| BceAI | ACGGC | 1 cut(s) | 740 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 661, 695 |
| BciT130I | CCWGG | 3 cut(s) | 257, 805, 1697 |
| BciVI | GTATCC | 1 cut(s) | 1800 |
| BclI | TGATCA | 1 cut(s) | 1330 |
| BcoDI | GTCTC | 5 cut(s) | 476, 1058, 1328, 1685, 1760 |
| BfaI | CTAG | 8 cut(s) | 149, 332, 633, 1422, 1437, 1502, 1628, 1706 |
| BfmI | CTRYAG | 1 cut(s) | 425 |
| BfuI | GTATCC | 1 cut(s) | 1800 |
| BisI | GCNGC | 5 cut(s) | 1010, 1188, 1416, 1419, 1563 |
| BlsI | GCNGC | 5 cut(s) | 1011, 1189, 1417, 1420, 1564 |
| Bme1390I | CCNGG | 3 cut(s) | 257, 805, 1697 |
| BmeT110I | CYCGRG | 1 cut(s) | 1763 |
| BmiI | GGNNCC | 3 cut(s) | 254, 354, 1099 |
| BmrFI | CCNGG | 3 cut(s) | 257, 805, 1697 |
| BmsI | GCATC | 5 cut(s) | 142, 589, 802, 1040, 1654 |
| BoxI | GACNNNNGTC | 1 cut(s) | 999 |
| BpiI | GAAGAC | 3 cut(s) | 620, 860, 1206 |
| Bpu10I | CCTNAGC | 1 cut(s) | 550 |
| BsaAI | YACGTR | 1 cut(s) | 1661 |
| BsaBI | GATNNNNATC | 1 cut(s) | 816 |
| BsaI | GGTCTC | 1 cut(s) | 1058 |
| BsaJI | CCNNGG | 3 cut(s) | 171, 357, 1510 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 551, 1696 |
| Bse1I | ACTGG | 3 cut(s) | 94, 1101, 1206 |
| Bse8I | GATNNNNATC | 1 cut(s) | 816 |
| BseBI | CCWGG | 3 cut(s) | 257, 805, 1697 |
| BseDI | CCNNGG | 3 cut(s) | 171, 357, 1510 |
| BseGI | GGATG | 2 cut(s) | 813, 817 |
| BseJI | GATNNNNATC | 1 cut(s) | 816 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 551, 1696 |
| BseMII | CTCAG | 4 cut(s) | 489, 564, 835, 1635 |
| BseNI | ACTGG | 3 cut(s) | 94, 1101, 1206 |
| BseXI | GCAGC | 5 cut(s) | 1021, 1174, 1427, 1430, 1574 |
| BsgI | GTGCAG | 1 cut(s) | 1536 |
| Bsh1236I | CGCG | 1 cut(s) | 1408 |
| BshFI | GGCC | 2 cut(s) | 1365, 1395 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1763 |
| BsiSI | CCGG | 1 cut(s) | 11 |
| BslFI | GGGAC | 1 cut(s) | 938 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 551, 1696 |
| BsmAI | GTCTC | 5 cut(s) | 476, 1058, 1328, 1685, 1760 |
| BsmBI | CGTCTC | 1 cut(s) | 1328 |
| BsmFI | GGGAC | 1 cut(s) | 938 |
| BsmI | GAATGC | 4 cut(s) | 217, 715, 973, 1733 |
| BsnI | GGCC | 2 cut(s) | 1365, 1395 |
| Bso31I | GGTCTC | 1 cut(s) | 1058 |
| BsoBI | CYCGRG | 1 cut(s) | 1763 |
| Bsp19I | CCATGG | 2 cut(s) | 171, 357 |
| BspACI | CCGC | 4 cut(s) | 250, 1128, 1589, 1690 |
| BspANI | GGCC | 2 cut(s) | 1365, 1395 |
| BspCNI | CTCAG | 4 cut(s) | 490, 563, 834, 1636 |
| BspFNI | CGCG | 1 cut(s) | 1408 |
| BspLI | GGNNCC | 3 cut(s) | 254, 354, 1099 |
| BspMAI | CTGCAG | 1 cut(s) | 429 |
| BspPI | GGATC | 8 cut(s) | 347, 360, 501, 723, 773, 825, 875, 1479 |
| BspTNI | GGTCTC | 1 cut(s) | 1058 |
| BsrI | ACTGG | 3 cut(s) | 94, 1101, 1206 |
| BssECI | CCNNGG | 3 cut(s) | 171, 357, 1510 |
| BssNAI | GTATAC | 2 cut(s) | 558, 1658 |
| BssSI | CACGAG | 1 cut(s) | 703 |
| BssT1I | CCWWGG | 3 cut(s) | 171, 357, 1510 |
| Bst1107I | GTATAC | 2 cut(s) | 558, 1658 |
| Bst2BI | CACGAG | 1 cut(s) | 703 |
| Bst2UI | CCWGG | 3 cut(s) | 257, 805, 1697 |
| Bst4CI | ACNGT | 2 cut(s) | 1679, 1812 |
| Bst6I | CTCTTC | 2 cut(s) | 497, 762 |
| BstBAI | YACGTR | 1 cut(s) | 1661 |
| BstC8I | GCNNGC | 4 cut(s) | 58, 215, 1367, 1519 |
| BstDEI | CTNAG | 8 cut(s) | 305, 498, 550, 821, 918, 1150, 1378, 1644 |
| BstDSI | CCRYGG | 2 cut(s) | 171, 357 |
| BstEII | GGTNACC | 1 cut(s) | 166 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 549 |
| BstF5I | GGATG | 2 cut(s) | 813, 817 |
| BstFNI | CGCG | 1 cut(s) | 1408 |
| BstHHI | GCGC | 1 cut(s) | 95 |
| BstMAI | GTCTC | 5 cut(s) | 476, 1058, 1328, 1685, 1760 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 669, 1616 |
| BstNI | CCWGG | 3 cut(s) | 257, 805, 1697 |
| BstNSI | RCATGY | 1 cut(s) | 494 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 999 |
| BstPI | GGTNACC | 1 cut(s) | 166 |
| BstSCI | CCNGG | 3 cut(s) | 255, 803, 1695 |
| BstSFI | CTRYAG | 1 cut(s) | 425 |
| BstUI | CGCG | 1 cut(s) | 1408 |
| BstV1I | GCAGC | 5 cut(s) | 1021, 1174, 1427, 1430, 1574 |
| BstV2I | GAAGAC | 3 cut(s) | 620, 860, 1206 |
| BstX2I | RGATCY | 6 cut(s) | 352, 506, 778, 830, 880, 1471 |
| BstYI | RGATCY | 6 cut(s) | 352, 506, 778, 830, 880, 1471 |
| BstZ17I | GTATAC | 2 cut(s) | 558, 1658 |
| BsuI | GTATCC | 1 cut(s) | 1800 |
| BsuRI | GGCC | 2 cut(s) | 1365, 1395 |
| BtgI | CCRYGG | 2 cut(s) | 171, 357 |
| BtgZI | GCGATG | 1 cut(s) | 810 |
| BtsCI | GGATG | 2 cut(s) | 813, 817 |
| BtsI | GCAGTG | 1 cut(s) | 679 |
| BtsIMutI | CAGTG | 3 cut(s) | 87, 679, 1326 |
| Cac8I | GCNNGC | 4 cut(s) | 58, 215, 1367, 1519 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1082 |
| CfoI | GCGC | 1 cut(s) | 95 |
| CseI | GACGC | 3 cut(s) | 1066, 1397, 1753 |
| Csp6I | GTAC | 1 cut(s) | 1709 |
| CviAII | CATG | 9 cut(s) | 172, 286, 358, 491, 592, 665, 1294, 1753, 1800 |
| CviQI | GTAC | 1 cut(s) | 1709 |
| DdeI | CTNAG | 8 cut(s) | 305, 498, 550, 821, 918, 1150, 1378, 1644 |
| DraI | TTTAAA | 1 cut(s) | 1453 |
| EaeI | YGGCCR | 1 cut(s) | 1393 |
| Eam1104I | CTCTTC | 2 cut(s) | 497, 762 |
| EarI | CTCTTC | 2 cut(s) | 497, 762 |
| Eco130I | CCWWGG | 3 cut(s) | 171, 357, 1510 |
| Eco147I | AGGCCT | 1 cut(s) | 1365 |
| Eco31I | GGTCTC | 1 cut(s) | 1058 |
| Eco32I | GATATC | 1 cut(s) | 1758 |
| Eco57I | CTGAAG | 1 cut(s) | 1249 |
| Eco88I | CYCGRG | 1 cut(s) | 1763 |
| Eco91I | GGTNACC | 1 cut(s) | 166 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 549 |
| EcoO65I | GGTNACC | 1 cut(s) | 166 |
| EcoRII | CCWGG | 3 cut(s) | 255, 803, 1695 |
| EcoRV | GATATC | 1 cut(s) | 1758 |
| EcoT14I | CCWWGG | 3 cut(s) | 171, 357, 1510 |
| ErhI | CCWWGG | 3 cut(s) | 171, 357, 1510 |
| Esp3I | CGTCTC | 1 cut(s) | 1328 |
| FaeI | CATG | 9 cut(s) | 175, 289, 361, 494, 595, 668, 1297, 1756, 1803 |
| FaqI | GGGAC | 1 cut(s) | 938 |
| FatI | CATG | 9 cut(s) | 171, 285, 357, 490, 591, 664, 1293, 1752, 1799 |
| FbaI | TGATCA | 1 cut(s) | 1330 |
| FblI | GTMKAC | 2 cut(s) | 557, 1657 |
| Fnu4HI | GCNGC | 5 cut(s) | 1010, 1188, 1416, 1419, 1563 |
| FokI | GGATG | 2 cut(s) | 820, 824 |
| Fsp4HI | GCNGC | 5 cut(s) | 1010, 1188, 1416, 1419, 1563 |
| FspBI | CTAG | 8 cut(s) | 149, 332, 633, 1422, 1437, 1502, 1628, 1706 |
| GlaI | GCGC | 1 cut(s) | 94 |
| GluI | GCNGC | 5 cut(s) | 1010, 1188, 1416, 1419, 1563 |
| HaeIII | GGCC | 2 cut(s) | 1365, 1395 |
| HapII | CCGG | 1 cut(s) | 11 |
| HgaI | GACGC | 3 cut(s) | 1066, 1397, 1753 |
| HhaI | GCGC | 1 cut(s) | 95 |
| Hin1II | CATG | 9 cut(s) | 175, 289, 361, 494, 595, 668, 1297, 1756, 1803 |
| Hin6I | GCGC | 1 cut(s) | 93 |
| HinP1I | GCGC | 1 cut(s) | 93 |
| HincII | GTYRAC | 2 cut(s) | 540, 1087 |
| HindII | GTYRAC | 2 cut(s) | 540, 1087 |
| HindIII | AAGCTT | 2 cut(s) | 54, 1608 |
| HpaI | GTTAAC | 1 cut(s) | 1087 |
| HpaII | CCGG | 1 cut(s) | 11 |
| HphI | GGTGA | 1 cut(s) | 178 |
| Hpy166II | GTNNAC | 6 cut(s) | 540, 558, 1087, 1375, 1429, 1658 |
| Hpy188III | TCNNGA | 6 cut(s) | 77, 149, 633, 776, 878, 1334 |
| Hpy8I | GTNNAC | 6 cut(s) | 540, 558, 1087, 1375, 1429, 1658 |
| HpyAV | CCTTC | 5 cut(s) | 924, 1088, 1130, 1273, 1439 |
| HpyCH4III | ACNGT | 2 cut(s) | 1679, 1812 |
| HpyCH4IV | ACGT | 2 cut(s) | 1321, 1660 |
| HpyCH4V | TGCA | 7 cut(s) | 427, 890, 971, 1009, 1415, 1517, 1667 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 669, 1616 |
| HpyF3I | CTNAG | 8 cut(s) | 305, 498, 550, 821, 918, 1150, 1378, 1644 |
| HpySE526I | ACGT | 2 cut(s) | 1321, 1660 |
| Hsp92II | CATG | 9 cut(s) | 175, 289, 361, 494, 595, 668, 1297, 1756, 1803 |
| HspAI | GCGC | 1 cut(s) | 93 |
| Ksp22I | TGATCA | 1 cut(s) | 1330 |
| KspAI | GTTAAC | 1 cut(s) | 1087 |
| LmnI | GCTCC | 1 cut(s) | 252 |
| Lsp1109I | GCAGC | 5 cut(s) | 1021, 1174, 1427, 1430, 1574 |
| LweI | GCATC | 5 cut(s) | 142, 589, 802, 1040, 1654 |
| MaeI | CTAG | 8 cut(s) | 149, 332, 633, 1422, 1437, 1502, 1628, 1706 |
| MaeII | ACGT | 2 cut(s) | 1321, 1660 |
| MaeIII | GTNAC | 1 cut(s) | 166 |
| MfeI | CAATTG | 1 cut(s) | 1004 |
| MflI | RGATCY | 6 cut(s) | 352, 506, 778, 830, 880, 1471 |
| MlsI | TGGCCA | 1 cut(s) | 1395 |
| MluNI | TGGCCA | 1 cut(s) | 1395 |
| MlyI | GAGTC | 7 cut(s) | 615, 740, 781, 842, 883, 1471, 1762 |
| MmeI | TCCRAC | 2 cut(s) | 330, 1698 |
| Mox20I | TGGCCA | 1 cut(s) | 1395 |
| MroXI | GAANNNNTTC | 2 cut(s) | 640, 947 |
| MscI | TGGCCA | 1 cut(s) | 1395 |
| MseI | TTAA | 4 cut(s) | 120, 533, 1086, 1452 |
| MslI | CAYNNNNRTG | 2 cut(s) | 590, 1311 |
| Msp20I | TGGCCA | 1 cut(s) | 1395 |
| MspA1I | CMGCKG | 2 cut(s) | 1130, 1565 |
| MspI | CCGG | 1 cut(s) | 11 |
| MspR9I | CCNGG | 3 cut(s) | 257, 805, 1697 |
| MunI | CAATTG | 1 cut(s) | 1004 |
| Mva1269I | GAATGC | 4 cut(s) | 217, 715, 973, 1733 |
| MvaI | CCWGG | 3 cut(s) | 257, 805, 1697 |
| MvnI | CGCG | 1 cut(s) | 1408 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 669, 1616 |
| NcoI | CCATGG | 2 cut(s) | 171, 357 |
| NlaIII | CATG | 9 cut(s) | 175, 289, 361, 494, 595, 668, 1297, 1756, 1803 |
| NlaIV | GGNNCC | 3 cut(s) | 254, 354, 1099 |
| NmuCI | GTSAC | 1 cut(s) | 166 |
| NspI | RCATGY | 1 cut(s) | 494 |
| PceI | AGGCCT | 1 cut(s) | 1365 |
| PciI | ACATGT | 1 cut(s) | 490 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 792 |
| PctI | GAATGC | 4 cut(s) | 217, 715, 973, 1733 |
| PdmI | GAANNNNTTC | 2 cut(s) | 640, 947 |
| PfeI | GAWTC | 4 cut(s) | 316, 678, 800, 1796 |
| PfoI | TCCNGGA | 1 cut(s) | 803 |
| PkrI | GCNGC | 5 cut(s) | 1011, 1189, 1417, 1420, 1564 |
| PleI | GAGTC | 7 cut(s) | 615, 740, 780, 842, 882, 1470, 1762 |
| PpsI | GAGTC | 7 cut(s) | 615, 740, 780, 842, 882, 1470, 1762 |
| Ppu21I | YACGTR | 1 cut(s) | 1661 |
| PscI | ACATGT | 1 cut(s) | 490 |
| PshAI | GACNNNNGTC | 1 cut(s) | 999 |
| PsiI | TTATAA | 2 cut(s) | 392, 909 |
| Psp6I | CCWGG | 3 cut(s) | 255, 803, 1695 |
| PspEI | GGTNACC | 1 cut(s) | 166 |
| PspGI | CCWGG | 3 cut(s) | 255, 803, 1695 |
| PspN4I | GGNNCC | 3 cut(s) | 254, 354, 1099 |
| PstI | CTGCAG | 1 cut(s) | 429 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1082 |
| PsuI | RGATCY | 6 cut(s) | 352, 506, 778, 830, 880, 1471 |
| PvuII | CAGCTG | 1 cut(s) | 1565 |
| RsaI | GTAC | 1 cut(s) | 1710 |
| RsaNI | GTAC | 1 cut(s) | 1709 |
| RseI | CAYNNNNRTG | 2 cut(s) | 590, 1311 |
| SaqAI | TTAA | 4 cut(s) | 120, 533, 1086, 1452 |
| SatI | GCNGC | 5 cut(s) | 1010, 1188, 1416, 1419, 1563 |
| SchI | GAGTC | 7 cut(s) | 615, 740, 781, 842, 883, 1471, 1762 |
| ScrFI | CCNGG | 3 cut(s) | 257, 805, 1697 |
| SfaNI | GCATC | 5 cut(s) | 142, 589, 802, 1040, 1654 |
| SfcI | CTRYAG | 1 cut(s) | 425 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 590, 1311 |
| SseBI | AGGCCT | 1 cut(s) | 1365 |
| SsiI | CCGC | 4 cut(s) | 250, 1128, 1589, 1690 |
| SspI | AATATT | 1 cut(s) | 406 |
| SspMI | CTAG | 8 cut(s) | 149, 332, 633, 1422, 1437, 1502, 1628, 1706 |
| StuI | AGGCCT | 1 cut(s) | 1365 |
| StyD4I | CCNGG | 3 cut(s) | 255, 803, 1695 |
| StyI | CCWWGG | 3 cut(s) | 171, 357, 1510 |
| TaaI | ACNGT | 2 cut(s) | 1679, 1812 |
| TaiI | ACGT | 2 cut(s) | 1324, 1663 |
| TaqI | TCGA | 3 cut(s) | 240, 851, 1034 |
| TfiI | GAWTC | 4 cut(s) | 316, 678, 800, 1796 |
| Tru1I | TTAA | 4 cut(s) | 120, 533, 1086, 1452 |
| Tru9I | TTAA | 4 cut(s) | 120, 533, 1086, 1452 |
| TscAI | CASTG | 3 cut(s) | 94, 679, 1333 |
| TseFI | GTSAC | 1 cut(s) | 166 |
| TseI | GCWGC | 5 cut(s) | 1009, 1187, 1415, 1418, 1562 |
| Tsp45I | GTSAC | 1 cut(s) | 166 |
| TspDTI | ATGAA | 5 cut(s) | 353, 468, 597, 912, 1160 |
| TspRI | CASTG | 3 cut(s) | 94, 679, 1333 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 549 |
| XapI | RAATTY | 1 cut(s) | 686 |
| XbaI | TCTAGA | 2 cut(s) | 148, 632 |
| XceI | RCATGY | 1 cut(s) | 494 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 671 |
| XmiI | GTMKAC | 2 cut(s) | 557, 1657 |
| XmnI | GAANNNNTTC | 2 cut(s) | 640, 947 |
| XspI | CTAG | 8 cut(s) | 149, 332, 633, 1422, 1437, 1502, 1628, 1706 |