Rh7CG256700

Wings apart-like protein regulation of heterochromatin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0009354
Physical Location & Seq
Reverse (-)
24926406 .. 24926753
348 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG256700.1

Sequence Viewer

Length: 348 bp
ATGGATGCAAGACTTGGTTCTTCCAAAAATGGCTCATCCAGTGGTTCAGCAAACCATTTAAGTGGGGGAACCCGTACATTTAGCTATGGTTCCGGGAAGGATGCTGGTCTCAGTTACGGATCCTATATTTCTAAAAACTCTAAAATTGATCTTTCGGAGGAGAGCCAATATCCCTTTGCATTTAGCAATGGTTCCAGTGAGGATGCTGGTCTCAGTCAGAGATCCTATATTTCTGAAGACTCTAAAGTTGACCTTTCACAGGAGAATGAAGATCCTTTTGCATTTGATGGAGATGATATTGAACCTTCTCAGTGGGACAAATTGTCTAGCAAGAAAAAGATTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WAPL

Protein Analysis

115

Amino Acids

12.31

Weight (kDa)

4.64

Isoelectric Point (pI)

50.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 4 cut(s) 114, 127, 216, 266
AcuI CTGAAG 1 cut(s) 255
AfaI GTAC 1 cut(s) 76
AfiI CCNNNNNNNGG 1 cut(s) 259
AgsI TTSAA 1 cut(s) 302
AhdI GACNNNNNGTC 1 cut(s) 322
AluBI AGCT 1 cut(s) 84
AluI AGCT 1 cut(s) 84
Alw26I GTCTC 2 cut(s) 113, 215
AlwI GGATC 4 cut(s) 114, 127, 216, 266
AsuC2I CCSGG 1 cut(s) 94
BamHI GGATCC 1 cut(s) 119
BbsI GAAGAC 1 cut(s) 243
BccI CCATC 1 cut(s) 281
BcnI CCSGG 1 cut(s) 94
BcoDI GTCTC 2 cut(s) 113, 215
BfaI CTAG 1 cut(s) 327
Bme1390I CCNGG 1 cut(s) 94
BmeRI GACNNNNNGTC 1 cut(s) 322
BmiI GGNNCC 4 cut(s) 70, 91, 121, 193
BmrFI CCNGG 1 cut(s) 94
BmsI GCATC 2 cut(s) 91, 193
BpiI GAAGAC 1 cut(s) 243
BpuMI CCSGG 1 cut(s) 94
BsaI GGTCTC 2 cut(s) 113, 215
Bsc4I CCNNNNNNNGG 1 cut(s) 259
Bse1I ACTGG 2 cut(s) 39, 195
Bse3DI GCAATG 1 cut(s) 193
BseGI GGATG 4 cut(s) 10, 35, 106, 208
BseLI CCNNNNNNNGG 1 cut(s) 259
BseMI GCAATG 1 cut(s) 193
BseMII CTCAG 3 cut(s) 124, 226, 323
BseNI ACTGG 2 cut(s) 39, 195
BseRI GAGGAG 1 cut(s) 173
BsiSI CCGG 1 cut(s) 93
BslFI GGGAC 1 cut(s) 329
BslI CCNNNNNNNGG 1 cut(s) 259
BsmAI GTCTC 2 cut(s) 113, 215
BsmFI GGGAC 1 cut(s) 329
Bso31I GGTCTC 2 cut(s) 113, 215
Bsp143I GATC 4 cut(s) 119, 148, 221, 271
BspCNI CTCAG 3 cut(s) 123, 225, 322
BspLI GGNNCC 4 cut(s) 70, 91, 121, 193
BspPI GGATC 4 cut(s) 114, 127, 216, 266
BspTNI GGTCTC 2 cut(s) 113, 215
BsrDI GCAATG 1 cut(s) 193
BsrI ACTGG 2 cut(s) 39, 195
BssMI GATC 4 cut(s) 119, 148, 221, 271
BstDEI CTNAG 3 cut(s) 110, 212, 309
BstENI CCTNNNNNAGG 1 cut(s) 257
BstF5I GGATG 4 cut(s) 10, 35, 106, 208
BstKTI GATC 4 cut(s) 122, 151, 224, 274
BstMAI GTCTC 2 cut(s) 113, 215
BstMBI GATC 4 cut(s) 119, 148, 221, 271
BstSCI CCNGG 1 cut(s) 92
BstV2I GAAGAC 1 cut(s) 243
BstX2I RGATCY 3 cut(s) 119, 221, 271
BstXI CCANNNNNNTGG 1 cut(s) 62
BstYI RGATCY 3 cut(s) 119, 221, 271
BtsCI GGATG 4 cut(s) 10, 35, 106, 208
BtsIMutI CAGTG 3 cut(s) 46, 202, 317
Csp6I GTAC 1 cut(s) 75
CviJI RGCY 3 cut(s) 33, 84, 165
CviKI_1 RGCY 3 cut(s) 33, 84, 165
CviQI GTAC 1 cut(s) 75
DdeI CTNAG 3 cut(s) 110, 212, 309
DpnI GATC 4 cut(s) 121, 150, 223, 273
DpnII GATC 4 cut(s) 119, 148, 221, 271
DriI GACNNNNNGTC 1 cut(s) 322
Eam1105I GACNNNNNGTC 1 cut(s) 322
Eco31I GGTCTC 2 cut(s) 113, 215
Eco57I CTGAAG 1 cut(s) 255
EcoNI CCTNNNNNAGG 1 cut(s) 257
FaiI YATR 3 cut(s) 87, 126, 228
FalI AAGNNNNNCTT 2 cut(s) 237, 269
FaqI GGGAC 1 cut(s) 329
FokI GGATG 4 cut(s) 17, 22, 113, 215
FspBI CTAG 1 cut(s) 327
HapII CCGG 1 cut(s) 93
HincII GTYRAC 1 cut(s) 250
HindII GTYRAC 1 cut(s) 250
HinfI GANTC 1 cut(s) 239
HpaII CCGG 1 cut(s) 93
Hpy166II GTNNAC 1 cut(s) 250
Hpy188I TCNGA 3 cut(s) 157, 219, 235
Hpy188III TCNNGA 1 cut(s) 345
Hpy8I GTNNAC 1 cut(s) 250
HpyAV CCTTC 2 cut(s) 91, 315
HpyCH4V TGCA 3 cut(s) 8, 179, 281
HpyF3I CTNAG 3 cut(s) 110, 212, 309
Kzo9I GATC 4 cut(s) 119, 148, 221, 271
LpnPI CCDG 6 cut(s) 52, 90, 106, 192, 208, 245
LweI GCATC 2 cut(s) 91, 193
MaeI CTAG 1 cut(s) 327
MaeIII GTNAC 1 cut(s) 113
MalI GATC 4 cut(s) 121, 150, 223, 273
MboI GATC 4 cut(s) 119, 148, 221, 271
MboII GAAGA 3 cut(s) 12, 248, 281
MflI RGATCY 3 cut(s) 119, 221, 271
MluCI AATT 2 cut(s) 144, 320
MlyI GAGTC 1 cut(s) 233
MnlI CCTC 2 cut(s) 151, 193
MseI TTAA 1 cut(s) 59
MslI CAYNNNNRTG 1 cut(s) 60
MspI CCGG 1 cut(s) 93
MspR9I CCNGG 1 cut(s) 94
NciI CCSGG 1 cut(s) 94
NdeII GATC 4 cut(s) 119, 148, 221, 271
NlaIV GGNNCC 4 cut(s) 70, 91, 121, 193
PfoI TCCNGGA 1 cut(s) 92
PleI GAGTC 1 cut(s) 233
PpsI GAGTC 1 cut(s) 233
PspN4I GGNNCC 4 cut(s) 70, 91, 121, 193
PsuI RGATCY 3 cut(s) 119, 221, 271
RsaI GTAC 1 cut(s) 76
RsaNI GTAC 1 cut(s) 75
RseI CAYNNNNRTG 1 cut(s) 60
SaqAI TTAA 1 cut(s) 59
Sau3AI GATC 4 cut(s) 119, 148, 221, 271
SchI GAGTC 1 cut(s) 233
ScrFI CCNGG 1 cut(s) 94
SetI ASST 3 cut(s) 86, 255, 307
SfaNI GCATC 2 cut(s) 91, 193
SmiMI CAYNNNNRTG 1 cut(s) 60
Sse9I AATT 2 cut(s) 144, 320
SspMI CTAG 1 cut(s) 327
StyD4I CCNGG 1 cut(s) 92
TasI AATT 2 cut(s) 144, 320
Tru1I TTAA 1 cut(s) 59
Tru9I TTAA 1 cut(s) 59
TscAI CASTG 3 cut(s) 46, 202, 317
TspDTI ATGAA 1 cut(s) 282
TspGWI ACGGA 1 cut(s) 132
TspRI CASTG 3 cut(s) 46, 202, 317
XagI CCTNNNNNAGG 1 cut(s) 257
XspI CTAG 1 cut(s) 327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.