Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005098.1

Orthogroup ID

OG0009354

Physical Location & Seq

Genomic Coordinates Forward (+)

16599 .. 23489

Gene Structure 6891 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005098.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2793 bp

atgtccgagctcggttccattccgataaccaagtggccagttcattccaatttccgaactctccagtcttccaattctaccctccaatttcaaatcttgttccaccccagcccccgaaacggcgccgtagcgatgattgtgaggacctacggccggcgcaagggaggaggaccagtaggccttcccaggacctattccgactcaaccctaaacgacgccgttcgcggcgacgacgacgatgacctcagcaacgacccgtttagaatctctctctcccaagataccccccaattcaattttaatttctcgtcgtcgcaagactcgtcgtcgcagtggtcgcagttcgattcggagccctacccccccgaattgaaaaggcccagttcgcgaaacggcgacgttttgaggaggccgtcgaagaaggcgaagaaggccgctgcggcgctggcgacggcgacgttgatggaggcgcaggagttcggggagatgatggagcacgtggacgaggtcaatttcgcgctggatgggctgaggaatggtcagccggttcggatcagaagggcgagcttgttgtctttgttggggatttgcggcacgcctcagcagagacggcttctgaggactcaggggatggcaaaaacgataattgaggctatattgggtctcagttttgatgatgcacctagcgatctggctgctgcaactattttctatgttttgacttgtgatggtcaggatgatcctcttttggaatcaccaagctgtattaattttttgattaggttttgcaaaccaattgtctcaaacatcactgaagataaagcaccaaaaattggacgaaagcttttagcattgcgtttgagtgctgacatctcgcattgtgcaccaaaaagattagactccagctcggctgctattctttccaaagtacatgagatccttgttacttgcaaggaaatgaaaccaagttctgctgatgatggtgaaatgagcatgccggagttaagccccaaatggatagctttgcttactatggagaaagcttgcttatctactatttctcttgaagaaacaactggtacagtaaggaaggctgggggcaactttaaggaaaaattacgagagcttggaggccttgatgctgtctttgaggtgtccatgacttgccattccgaaatggagggttggctaaaaggtaattctccttctacttgggaaaaggaaatcaacatggtgcggagcctggttctgcttttgaaatgcttgaagatcatggaaaatgccacattcttgagtaaagaaaatcagagccacttgctagaaatgaaaggaaagttggttcccatggaaaagcccatatctttcacagaacttgttataagtaccatcagtatcctatcagggctttatctacataaaagtttatctgctgcttccaatgatgacatgtctcataatctttcaaatgggaatgaatatgcttctgaggaaagctcccacaaatgtcagagcaatggattggtgtccacttctcgctcggtattttctgtatccaattcagaaactaccagcacgtctatgactgacacctatttgttgaagacaagacttagttcttccagaaatggctcatctagtggtacagcaagccatttaagtgaggcaacccgcacatttagctatggttcccggaaaaatgctggttccagtcagagatcctatatttctaaaaactctataattgatctttcggaggagagccaagatccttttgcatttagctgtggttccggtgaggatgctggtctcagtcagagatcctatatttctgaagactctaaagttgacctttcacaggagagtcaagatccttttgcatttgatgaagatgatattgaaccttctcagtgggacatattatctggcaagaaaaagatttgtcgaacgcgaaaaaatggagaagcttacagagaacttgatgatggttgccagttgcagctgattatgagccaagcagaatcaagttttggggaagaccatgatatgcctgagacatcctatgcgggtgctgttagtaaagagggttccagtcttttggctgactgccttcttactgctgttaaggttctgatgaacttggcaaatgagaatcctgttggttgtcagcaaattgctgcaaatggaggactggagaccatgtcttccttgattgctagccactttccttcattttcatctcccttcagcgagagaaatgacaatacttcaagcattgaactggataatcagaatggtagacatcttaccgatcaagagctagattttcttgtagctattttgggcctgcttgtaaacttgattgagaaagatggtcaaaacagatcacggctcgctgcagtcactgttcacttacctatttctgatgggtttgaagaggaaagtcacaaggatctaattctgctaatatgctctatattcctggctaatcaaggtgcaggcgagggatccgaagaaggaaagactttgccaaatgatgaggcagctgtgttacaaggagaacaagaagctgagaaaatgatagtggaagcttatgctgccctgcttttagcattcctttcaactgaaagtaagggtgtacgcgatgccattgctgactgtctcccagatcgcaacctggctatcctagtacctgtgttggacagatttgtggcatttcacttgacgttaaacatgatctcaccggagactcataaagtcgtaagtgaagtaattgaatcatgtaggatacgataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WAPL

Protein Analysis

930

Amino Acids

101.67

Weight (kDa)

5.1

Isoelectric Point (pI)

55.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009354)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11060 AT1G61030
fragaria_vesca	FvH4_3g04800 FvH4_3g04800
malus_domestica	MD05G1316600.v1.1 MD10G1297100.v1.1
prunus_persica	Prupe.4G043300_v2.0.a1 Prupe.4G043300_v2.0.a1 Prupe.4G043300_v2.0.a1
pyrus_communis	pycom05g29370 pycom10g25000
rosa_chinensis	RchiOBHm_Chr5g0007891
rosa_laevigata	RLG00000031502
rosa_multiflora	Rmu_sc0005098.1_g000006
rosa_roxburghii	Rroxscaffold_1G00068540
rosa_rugosa	Rorug04G0430900
rosa_samantha	Rh5AG059800 Rh5BG056700 Rh5CG066500 Rh5DG055700 Rh7CG256700
rosa_wichuraiana	Rw5G006040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1379
AccB1I	GGYRCC	1 cut(s)	122
AccB7I	CCANNNNNTGG	1 cut(s)	833
AccI	GTMKAC	1 cut(s)	2296
AccII	CGCG	5 cut(s)	225, 388, 518, 1948, 2640
AciI	CCGC	7 cut(s)	225, 435, 440, 591, 1237, 1669, 2063
AcoI	YGGCCR	2 cut(s)	35, 151
AcuI	CTGAAG	3 cut(s)	834, 1851, 2227
AcvI	CACGTG	1 cut(s)	499
AcyI	GRCGYC	2 cut(s)	123, 216
AfaI	GTAC	6 cut(s)	930, 1081, 1384, 1642, 2637, 2688
AfiI	CCNNNNNNNGG	5 cut(s)	119, 153, 160, 833, 1855
AflIII	ACRYGT	1 cut(s)	1446
AhdI	GACNNNNNGTC	1 cut(s)	325
AjiI	CACGTC	1 cut(s)	1575
AjnI	CCWGG	4 cut(s)	185, 1242, 2478, 2673
AjuI	GAANNNNNNNTTGG	4 cut(s)	1319, 1351, 2010, 2042
AloI	GAACNNNNNNTCC	2 cut(s)	1323, 1355
Alw21I	GWGCWC	3 cut(s)	12, 498, 886
Alw26I	GTCTC	9 cut(s)	601, 668, 805, 1455, 1811, 2045, 2186, 2663, 2738
Alw44I	GTGCAC	1 cut(s)	882
AlwNI	CAGNNNCTG	1 cut(s)	2402
AoxI	GGCC	8 cut(s)	35, 151, 178, 377, 410, 432, 1132, 2341
ApaLI	GTGCAC	1 cut(s)	882
ArsI	GACNNNNNNTTYG	2 cut(s)	783, 815
AseI	ATTAAT	1 cut(s)	768
AspLEI	GCGC	5 cut(s)	125, 159, 445, 472, 520
AspS9I	GGNCC	5 cut(s)	144, 170, 189, 378, 2341
AsuC2I	CCSGG	1 cut(s)	1690
AsuHPI	GGTGA	4 cut(s)	747, 995, 1805, 2730
AsuNHI	GCTAGC	1 cut(s)	2213
AvaII	GGWCC	3 cut(s)	144, 170, 189
BaeGI	GKGCMC	1 cut(s)	886
BalI	TGGCCA	1 cut(s)	37
BamHI	GGATCC	1 cut(s)	2504
BanI	GGYRCC	1 cut(s)	122
BanII	GRGCYC	2 cut(s)	12, 357
BarI	GAAGNNNNNNTAC	2 cut(s)	1189, 1221
BbrPI	CACGTG	1 cut(s)	499
BbsI	GAAGAC	5 cut(s)	60, 1607, 1839, 2040, 2193
Bbv12I	GWGCWC	3 cut(s)	12, 498, 886
BbvCI	CCTCAGC	3 cut(s)	245, 530, 600
BceAI	ACGGC	9 cut(s)	110, 136, 166, 203, 397, 409, 468, 626, 2402
BcgI	CGANNNNNNTGC	4 cut(s)	677, 711, 2630, 2664
BciT130I	CCWGG	4 cut(s)	187, 1244, 2480, 2675
BciVI	GTATCC	3 cut(s)	1403, 1561, 2778
BcnI	CCSGG	1 cut(s)	1690
BcoDI	GTCTC	9 cut(s)	601, 668, 805, 1455, 1811, 2045, 2186, 2663, 2738
BfaI	CTAG	6 cut(s)	684, 1319, 1635, 2214, 2318, 2684
BfmI	CTRYAG	1 cut(s)	2394
BfoI	RGCGCY	2 cut(s)	126, 446
BfuI	GTATCC	3 cut(s)	1403, 1561, 2778
BglI	GCCNNNNNGGC	1 cut(s)	440
Bme1390I	CCNGG	5 cut(s)	187, 1244, 1690, 2480, 2675
Bme18I	GGWCC	3 cut(s)	144, 170, 189
BmeRI	GACNNNNNGTC	1 cut(s)	325
BmgBI	CACGTC	1 cut(s)	1575
BmgT120I	GGNCC	5 cut(s)	144, 170, 189, 378, 2341
BmrFI	CCNGG	5 cut(s)	187, 1244, 1690, 2480, 2675
BmrI	ACTGGG	1 cut(s)	375
BmsI	GCATC	4 cut(s)	667, 1129, 1789, 2632
BmtI	GCTAGC	1 cut(s)	2217
BmuI	ACTGGG	1 cut(s)	375
BpiI	GAAGAC	5 cut(s)	60, 1607, 1839, 2040, 2193
BplI	GAGNNNNNCTC	2 cut(s)	1478, 1510
BpmI	CTGGAG	3 cut(s)	47, 886, 2210
Bpu10I	CCTNAGC	3 cut(s)	245, 530, 600
BpuEI	CTTGAG	1 cut(s)	1312
BpuMI	CCSGG	1 cut(s)	1690
BsaAI	YACGTR	1 cut(s)	499
BsaHI	GRCGYC	2 cut(s)	123, 216
BsaI	GGTCTC	3 cut(s)	668, 1811, 2186
BsaJI	CCNNGG	2 cut(s)	185, 1344
BsaWI	WCCGGW	2 cut(s)	1790, 2740
BsaXI	ACNNNNNCTCC	4 cut(s)	159, 189, 2183, 2213
Bsc4I	CCNNNNNNNGG	5 cut(s)	119, 153, 160, 833, 1855
Bse118I	RCCGGY	2 cut(s)	153, 544
Bse3DI	GCAATG	3 cut(s)	851, 1519, 2646
BseBI	CCWGG	4 cut(s)	187, 1244, 2480, 2675
BseDI	CCNNGG	2 cut(s)	185, 1344
BseGI	GGATG	5 cut(s)	529, 636, 742, 1804, 2054
BseLI	CCNNNNNNNGG	5 cut(s)	119, 153, 160, 833, 1855
BseMI	GCAATG	3 cut(s)	851, 1519, 2646
BseRI	GAGGAG	3 cut(s)	180, 421, 1769
BseSI	GKGCMC	1 cut(s)	886
BseX3I	CGGCCG	1 cut(s)	151
BseYI	CCCAGC	2 cut(s)	107, 1094
BsgI	GTGCAG	1 cut(s)	2514
Bsh1236I	CGCG	5 cut(s)	225, 388, 518, 1948, 2640
Bsh1285I	CGRYCG	1 cut(s)	154
BshFI	GGCC	8 cut(s)	37, 153, 180, 379, 412, 434, 1134, 2343
BshNI	GGYRCC	1 cut(s)	122
BsiEI	CGRYCG	1 cut(s)	154
BsiHKAI	GWGCWC	3 cut(s)	12, 498, 886
BsiSI	CCGG	6 cut(s)	154, 545, 998, 1690, 1791, 2741
BslFI	GGGAC	1 cut(s)	1925
BslI	CCNNNNNNNGG	5 cut(s)	119, 153, 160, 833, 1855
BsmAI	GTCTC	9 cut(s)	601, 668, 805, 1455, 1811, 2045, 2186, 2663, 2738
BsmBI	CGTCTC	1 cut(s)	601
BsmFI	GGGAC	1 cut(s)	1925
BsmI	GAATGC	1 cut(s)	2609
BsnI	GGCC	8 cut(s)	37, 153, 180, 379, 412, 434, 1134, 2343
Bso31I	GGTCTC	3 cut(s)	668, 1811, 2186
Bsp1286I	GDGCHC	4 cut(s)	12, 357, 498, 886
Bsp19I	CCATGG	1 cut(s)	1344
Bsp68I	TCGCGA	1 cut(s)	388
BspACI	CCGC	7 cut(s)	225, 435, 440, 591, 1237, 1669, 2063
BspANI	GGCC	8 cut(s)	37, 153, 180, 379, 412, 434, 1134, 2343
BspFNI	CGCG	5 cut(s)	225, 388, 518, 1948, 2640
BspMAI	CTGCAG	1 cut(s)	2398
BspOI	GCTAGC	1 cut(s)	2217
BspT107I	GGYRCC	1 cut(s)	122
BspTNI	GGTCTC	3 cut(s)	668, 1811, 2186
BsrDI	GCAATG	3 cut(s)	851, 1519, 2646
BsrFI	RCCGGY	2 cut(s)	153, 544
BssAI	RCCGGY	2 cut(s)	153, 544
BssECI	CCNNGG	2 cut(s)	185, 1344
BssNI	GRCGYC	2 cut(s)	123, 216
BssT1I	CCWWGG	1 cut(s)	1344
Bst2UI	CCWGG	4 cut(s)	187, 1244, 2480, 2675
Bst4CI	ACNGT	3 cut(s)	1084, 2404, 2657
Bst6I	CTCTTC	1 cut(s)	2427
BstACI	GRCGYC	2 cut(s)	123, 216
BstBAI	YACGTR	1 cut(s)	499
BstDSI	CCRYGG	1 cut(s)	1344
BstENI	CCTNNNNNAGG	1 cut(s)	1853
BstF5I	GGATG	5 cut(s)	529, 636, 742, 1804, 2054
BstFNI	CGCG	5 cut(s)	225, 388, 518, 1948, 2640
BstH2I	RGCGCY	2 cut(s)	126, 446
BstHHI	GCGC	5 cut(s)	125, 159, 445, 472, 520
BstMAI	GTCTC	9 cut(s)	601, 668, 805, 1455, 1811, 2045, 2186, 2663, 2738
BstMCI	CGRYCG	1 cut(s)	154
BstMWI	GCNNNNNNNGC	9 cut(s)	337, 385, 431, 440, 446, 526, 610, 1677, 2594
BstNI	CCWGG	4 cut(s)	187, 1244, 2480, 2675
BstNSI	RCATGY	2 cut(s)	997, 1450
BstSCI	CCNGG	5 cut(s)	185, 1242, 1688, 2478, 2673
BstSFI	CTRYAG	1 cut(s)	2394
BstSLI	GKGCMC	1 cut(s)	886
BstUI	CGCG	5 cut(s)	225, 388, 518, 1948, 2640
BstV2I	GAAGAC	5 cut(s)	60, 1607, 1839, 2040, 2193
BstX2I	RGATCY	7 cut(s)	936, 1715, 1765, 1817, 1867, 2449, 2504
BstXI	CCANNNNNNTGG	1 cut(s)	2095
BstYI	RGATCY	7 cut(s)	936, 1715, 1765, 1817, 1867, 2449, 2504
BstZI	CGGCCG	1 cut(s)	151
BsuI	GTATCC	3 cut(s)	1403, 1561, 2778
BsuRI	GGCC	8 cut(s)	37, 153, 180, 379, 412, 434, 1134, 2343
BtgI	CCRYGG	1 cut(s)	1344
BtgZI	GCGATG	2 cut(s)	146, 2655
BtrI	CACGTC	1 cut(s)	1575
BtsCI	GGATG	5 cut(s)	529, 636, 742, 1804, 2054
BtsI	GCAGTG	1 cut(s)	338
BtsIMutI	CAGTG	4 cut(s)	338, 810, 1913, 2400
BtuMI	TCGCGA	1 cut(s)	388
CaiI	CAGNNNCTG	1 cut(s)	2402
CfoI	GCGC	5 cut(s)	125, 159, 445, 472, 520
Cfr10I	RCCGGY	2 cut(s)	153, 544
Cfr13I	GGNCC	5 cut(s)	144, 170, 189, 378, 2341
CseI	GACGC	1 cut(s)	224
Csp6I	GTAC	6 cut(s)	929, 1080, 1383, 1641, 2636, 2687
CviQI	GTAC	6 cut(s)	929, 1080, 1383, 1641, 2636, 2687
DinI	GGCGCC	1 cut(s)	124
DriI	GACNNNNNGTC	1 cut(s)	325
EaeI	YGGCCR	2 cut(s)	35, 151
EagI	CGGCCG	1 cut(s)	151
Eam1104I	CTCTTC	1 cut(s)	2427
Eam1105I	GACNNNNNGTC	1 cut(s)	325
EarI	CTCTTC	1 cut(s)	2427
Ecl136II	GAGCTC	1 cut(s)	10
EclXI	CGGCCG	1 cut(s)	151
Eco130I	CCWWGG	1 cut(s)	1344
Eco147I	AGGCCT	2 cut(s)	180, 1134
Eco24I	GRGCYC	2 cut(s)	12, 357
Eco31I	GGTCTC	3 cut(s)	668, 1811, 2186
Eco47I	GGWCC	3 cut(s)	144, 170, 189
Eco52I	CGGCCG	1 cut(s)	151
Eco53kI	GAGCTC	1 cut(s)	10
Eco57I	CTGAAG	3 cut(s)	834, 1851, 2227
Eco72I	CACGTG	1 cut(s)	499
EcoICRI	GAGCTC	1 cut(s)	10
EcoNI	CCTNNNNNAGG	1 cut(s)	1853
EcoO109I	RGGNCCY	2 cut(s)	144, 189
EcoRII	CCWGG	4 cut(s)	185, 1242, 2478, 2673
EcoT14I	CCWWGG	1 cut(s)	1344
EcoT38I	GRGCYC	2 cut(s)	12, 357
EgeI	GGCGCC	1 cut(s)	124
EheI	GGCGCC	1 cut(s)	124
ErhI	CCWWGG	1 cut(s)	1344
Esp3I	CGTCTC	1 cut(s)	601
FalI	AAGNNNNNCTT	2 cut(s)	1833, 1865
FaqI	GGGAC	1 cut(s)	1925
FauI	CCCGC	2 cut(s)	1676, 2056
FblI	GTMKAC	1 cut(s)	2296
FokI	GGATG	5 cut(s)	536, 643, 749, 1811, 2041
FriOI	GRGCYC	2 cut(s)	12, 357
FspBI	CTAG	6 cut(s)	684, 1319, 1635, 2214, 2318, 2684
GlaI	GCGC	5 cut(s)	124, 158, 444, 471, 519
GsaI	CCCAGC	2 cut(s)	111, 1098
GsuI	CTGGAG	3 cut(s)	47, 886, 2210
HaeII	RGCGCY	2 cut(s)	126, 446
HaeIII	GGCC	8 cut(s)	37, 153, 180, 379, 412, 434, 1134, 2343
HapII	CCGG	6 cut(s)	154, 545, 998, 1690, 1791, 2741
HgaI	GACGC	1 cut(s)	224
HhaI	GCGC	5 cut(s)	125, 159, 445, 472, 520
Hin1I	GRCGYC	2 cut(s)	123, 216
Hin6I	GCGC	5 cut(s)	123, 157, 443, 470, 518
HinP1I	GCGC	5 cut(s)	123, 157, 443, 470, 518
HincII	GTYRAC	1 cut(s)	1846
HindII	GTYRAC	1 cut(s)	1846
HindIII	AAGCTT	4 cut(s)	842, 1041, 1962, 2586
HpaII	CCGG	6 cut(s)	154, 545, 998, 1690, 1791, 2741
HphI	GGTGA	4 cut(s)	747, 995, 1805, 2730
Hpy166II	GTNNAC	8 cut(s)	502, 884, 1527, 1846, 2297, 2353, 2407, 2636
Hpy188III	TCNNGA	7 cut(s)	387, 734, 1064, 1291, 1620, 1865, 2312
Hpy8I	GTNNAC	8 cut(s)	502, 884, 1527, 1846, 2297, 2353, 2407, 2636
HpyCH4III	ACNGT	3 cut(s)	1084, 2404, 2657
HpyCH4IV	ACGT	5 cut(s)	399, 458, 498, 1574, 2723
HpyF10VI	GCNNNNNNNGC	9 cut(s)	337, 385, 431, 440, 446, 526, 610, 1677, 2594
HpySE526I	ACGT	5 cut(s)	399, 458, 498, 1574, 2723
Hsp92I	GRCGYC	2 cut(s)	123, 216
HspAI	GCGC	5 cut(s)	123, 157, 443, 470, 518
KasI	GGCGCC	1 cut(s)	122
KroI	GCCGGC	1 cut(s)	153
KroNI	GCCGGC	1 cut(s)	155
LmnI	GCTCC	4 cut(s)	352, 493, 1239, 1499
LweI	GCATC	4 cut(s)	667, 1129, 1789, 2632
MaeI	CTAG	6 cut(s)	684, 1319, 1635, 2214, 2318, 2684
MaeII	ACGT	5 cut(s)	399, 458, 498, 1574, 2723
MaeIII	GTNAC	4 cut(s)	943, 2398, 2441, 2547
MfeI	CAATTG	1 cut(s)	795
MflI	RGATCY	7 cut(s)	936, 1715, 1765, 1817, 1867, 2449, 2504
MhlI	GDGCHC	4 cut(s)	12, 357, 498, 886
MlsI	TGGCCA	1 cut(s)	37
MluNI	TGGCCA	1 cut(s)	37
Mly113I	GGCGCC	1 cut(s)	123
MlyI	GAGTC	7 cut(s)	194, 314, 616, 893, 1829, 1870, 2740
MmeI	TCCRAC	2 cut(s)	222, 2676
Mox20I	TGGCCA	1 cut(s)	37
MroNI	GCCGGC	1 cut(s)	153
MscI	TGGCCA	1 cut(s)	37
MseI	TTAA	7 cut(s)	300, 768, 1004, 1107, 1655, 2121, 2726
MslI	CAYNNNNRTG	2 cut(s)	1577, 1656
Msp20I	TGGCCA	1 cut(s)	37
MspA1I	CMGCKG	3 cut(s)	437, 1999, 2543
MspI	CCGG	6 cut(s)	154, 545, 998, 1690, 1791, 2741
MspR9I	CCNGG	5 cut(s)	187, 1244, 1690, 2480, 2675
MunI	CAATTG	1 cut(s)	795
Mva1269I	GAATGC	1 cut(s)	2609
MvaI	CCWGG	4 cut(s)	187, 1244, 2480, 2675
MvnI	CGCG	5 cut(s)	225, 388, 518, 1948, 2640
MwoI	GCNNNNNNNGC	9 cut(s)	337, 385, 431, 440, 446, 526, 610, 1677, 2594
NaeI	GCCGGC	1 cut(s)	155
NarI	GGCGCC	1 cut(s)	123
NciI	CCSGG	1 cut(s)	1690
NcoI	CCATGG	1 cut(s)	1344
NgoMIV	GCCGGC	1 cut(s)	153
NheI	GCTAGC	1 cut(s)	2213
NmeAIII	GCCGAG	1 cut(s)	887
NmuCI	GTSAC	2 cut(s)	2398, 2441
NruI	TCGCGA	1 cut(s)	388
NspI	RCATGY	2 cut(s)	997, 1450
PaeI	GCATGC	1 cut(s)	997
PceI	AGGCCT	2 cut(s)	180, 1134
PciI	ACATGT	1 cut(s)	1446
PcsI	WCGNNNNNNNCGW	2 cut(s)	320, 422
PctI	GAATGC	1 cut(s)	2609
PdiI	GCCGGC	1 cut(s)	155
PfeI	GAWTC	6 cut(s)	264, 347, 752, 2018, 2149, 2774
PflFI	GACNNNGTC	2 cut(s)	506, 2197
PflMI	CCANNNNNTGG	1 cut(s)	833
PfoI	TCCNGGA	1 cut(s)	1688
PleI	GAGTC	7 cut(s)	194, 314, 616, 893, 1829, 1869, 2740
PluTI	GGCGCC	1 cut(s)	126
PmaCI	CACGTG	1 cut(s)	499
PmlI	CACGTG	1 cut(s)	499
PpsI	GAGTC	7 cut(s)	194, 314, 616, 893, 1829, 1869, 2740
Ppu21I	YACGTR	1 cut(s)	499
PpuMI	RGGWCCY	2 cut(s)	144, 189
PscI	ACATGT	1 cut(s)	1446
PshBI	ATTAAT	1 cut(s)	768
PsiI	TTATAA	1 cut(s)	1379
Psp124BI	GAGCTC	1 cut(s)	12
Psp5II	RGGWCCY	2 cut(s)	144, 189
Psp6I	CCWGG	4 cut(s)	185, 1242, 2478, 2673
PspCI	CACGTG	1 cut(s)	499
PspFI	CCCAGC	2 cut(s)	107, 1094
PspGI	CCWGG	4 cut(s)	185, 1242, 2478, 2673
PspPI	GGNCC	5 cut(s)	144, 170, 189, 378, 2341
PspPPI	RGGWCCY	2 cut(s)	144, 189
PsrI	GAACNNNNNNTAC	2 cut(s)	2068, 2100
PstI	CTGCAG	1 cut(s)	2398
PstNI	CAGNNNCTG	1 cut(s)	2402
PsuI	RGATCY	7 cut(s)	936, 1715, 1765, 1817, 1867, 2449, 2504
PsyI	GACNNNGTC	2 cut(s)	506, 2197
PvuII	CAGCTG	2 cut(s)	1999, 2543
RruI	TCGCGA	1 cut(s)	388
RsaI	GTAC	6 cut(s)	930, 1081, 1384, 1642, 2637, 2688
RsaNI	GTAC	6 cut(s)	929, 1080, 1383, 1641, 2636, 2687
RseI	CAYNNNNRTG	2 cut(s)	1577, 1656
SacI	GAGCTC	1 cut(s)	12
SaqAI	TTAA	7 cut(s)	300, 768, 1004, 1107, 1655, 2121, 2726
Sau96I	GGNCC	5 cut(s)	144, 170, 189, 378, 2341
SchI	GAGTC	7 cut(s)	194, 314, 616, 893, 1829, 1870, 2740
ScrFI	CCNGG	5 cut(s)	187, 1244, 1690, 2480, 2675
SduI	GDGCHC	4 cut(s)	12, 357, 498, 886
SfaNI	GCATC	4 cut(s)	667, 1129, 1789, 2632
SfcI	CTRYAG	1 cut(s)	2394
SfoI	GGCGCC	1 cut(s)	124
SinI	GGWCC	3 cut(s)	144, 170, 189
SmiMI	CAYNNNNRTG	2 cut(s)	1577, 1656
SmlI	CTYRAG	1 cut(s)	1291
SmoI	CTYRAG	1 cut(s)	1291
SphI	GCATGC	1 cut(s)	997
SseBI	AGGCCT	2 cut(s)	180, 1134
SsiI	CCGC	7 cut(s)	225, 435, 440, 591, 1237, 1669, 2063
SspDI	GGCGCC	1 cut(s)	122
SspMI	CTAG	6 cut(s)	684, 1319, 1635, 2214, 2318, 2684
SstI	GAGCTC	1 cut(s)	12
StuI	AGGCCT	2 cut(s)	180, 1134
StyD4I	CCNGG	5 cut(s)	185, 1242, 1688, 2478, 2673
StyI	CCWWGG	1 cut(s)	1344
TaaI	ACNGT	3 cut(s)	1084, 2404, 2657
TaiI	ACGT	5 cut(s)	402, 461, 501, 1577, 2726
TaqI	TCGA	3 cut(s)	345, 416, 1942
TatI	WGTACW	1 cut(s)	928
TauI	GCSGC	4 cut(s)	228, 437, 443, 594
TfiI	GAWTC	6 cut(s)	264, 347, 752, 2018, 2149, 2774
Tru1I	TTAA	7 cut(s)	300, 768, 1004, 1107, 1655, 2121, 2726
Tru9I	TTAA	7 cut(s)	300, 768, 1004, 1107, 1655, 2121, 2726
TscAI	CASTG	4 cut(s)	338, 817, 1913, 2407
TseFI	GTSAC	2 cut(s)	2398, 2441
Tsp45I	GTSAC	2 cut(s)	2398, 2441
TspDTI	ATGAA	8 cut(s)	32, 974, 1340, 1488, 1899, 2147, 2217, 2223
TspRI	CASTG	4 cut(s)	338, 817, 1913, 2407
Tth111I	GACNNNGTC	2 cut(s)	506, 2197
Van91I	CCANNNNNTGG	1 cut(s)	833
VneI	GTGCAC	1 cut(s)	882
VpaK11BI	GGWCC	3 cut(s)	144, 170, 189
VspI	ATTAAT	1 cut(s)	768
XagI	CCTNNNNNAGG	1 cut(s)	1853
XceI	RCATGY	2 cut(s)	997, 1450
XmiI	GTMKAC	1 cut(s)	2296
XspI	CTAG	6 cut(s)	684, 1319, 1635, 2214, 2318, 2684

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.