Wings apart-like protein regulation of heterochromatin
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11060 AT1G61030 |
| fragaria_vesca | FvH4_3g04800 FvH4_3g04800 |
| malus_domestica | MD05G1316600.v1.1 MD10G1297100.v1.1 |
| prunus_persica | Prupe.4G043300_v2.0.a1 Prupe.4G043300_v2.0.a1 Prupe.4G043300_v2.0.a1 |
| pyrus_communis | pycom05g29370 pycom10g25000 |
| rosa_chinensis | RchiOBHm_Chr5g0007891 |
| rosa_laevigata | RLG00000031502 |
| rosa_multiflora | Rmu_sc0005098.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00068540 |
| rosa_rugosa | Rorug04G0430900 |
| rosa_samantha | Rh5AG059800 Rh5BG056700 Rh5CG066500 Rh5DG055700 Rh7CG256700 |
| rosa_wichuraiana | Rw5G006040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 113 |
| AciI | CCGC | 3 cut(s) | 5, 48, 186 |
| AclWI | GGATC | 1 cut(s) | 196 |
| AcoI | YGGCCR | 1 cut(s) | 183 |
| AcuI | CTGAAG | 1 cut(s) | 24 |
| AcyI | GRCGYC | 1 cut(s) | 114 |
| AgsI | TTSAA | 1 cut(s) | 64 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 44, 76 |
| AluBI | AGCT | 4 cut(s) | 44, 97, 154, 267 |
| AluI | AGCT | 4 cut(s) | 44, 97, 154, 267 |
| AlwI | GGATC | 1 cut(s) | 196 |
| AoxI | GGCC | 1 cut(s) | 183 |
| ApeKI | GCWGC | 2 cut(s) | 188, 273 |
| AspLEI | GCGC | 1 cut(s) | 116 |
| BanI | GGYRCC | 1 cut(s) | 113 |
| BbvI | GCAGC | 2 cut(s) | 175, 260 |
| BfmI | CTRYAG | 1 cut(s) | 302 |
| BfoI | RGCGCY | 1 cut(s) | 117 |
| BisI | GCNGC | 4 cut(s) | 6, 186, 189, 274 |
| BlsI | GCNGC | 4 cut(s) | 7, 187, 190, 275 |
| BmiI | GGNNCC | 1 cut(s) | 115 |
| BpuEI | CTTGAG | 2 cut(s) | 140, 148 |
| BsaHI | GRCGYC | 1 cut(s) | 114 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 115, 145 |
| BseMII | CTCAG | 1 cut(s) | 112 |
| BseRI | GAGGAG | 1 cut(s) | 123 |
| BseXI | GCAGC | 2 cut(s) | 175, 260 |
| BseYI | CCCAGC | 1 cut(s) | 267 |
| BsgI | GTGCAG | 1 cut(s) | 174 |
| BshFI | GGCC | 1 cut(s) | 185 |
| BshNI | GGYRCC | 1 cut(s) | 113 |
| BsnI | GGCC | 1 cut(s) | 185 |
| Bsp143I | GATC | 1 cut(s) | 201 |
| BspACI | CCGC | 3 cut(s) | 5, 48, 186 |
| BspANI | GGCC | 1 cut(s) | 185 |
| BspCNI | CTCAG | 1 cut(s) | 111 |
| BspLI | GGNNCC | 1 cut(s) | 115 |
| BspPI | GGATC | 1 cut(s) | 196 |
| BspT107I | GGYRCC | 1 cut(s) | 113 |
| BssMI | GATC | 1 cut(s) | 201 |
| BssNI | GRCGYC | 1 cut(s) | 114 |
| Bst4CI | ACNGT | 3 cut(s) | 75, 195, 215 |
| Bst6I | CTCTTC | 1 cut(s) | 73 |
| BstACI | GRCGYC | 1 cut(s) | 114 |
| BstC8I | GCNNGC | 1 cut(s) | 112 |
| BstDEI | CTNAG | 1 cut(s) | 98 |
| BstH2I | RGCGCY | 1 cut(s) | 117 |
| BstHHI | GCGC | 1 cut(s) | 116 |
| BstKTI | GATC | 1 cut(s) | 204 |
| BstMBI | GATC | 1 cut(s) | 201 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 14, 273 |
| BstSFI | CTRYAG | 1 cut(s) | 302 |
| BstV1I | GCAGC | 2 cut(s) | 175, 260 |
| BsuRI | GGCC | 1 cut(s) | 185 |
| BtsIMutI | CAGTG | 2 cut(s) | 106, 220 |
| Cac8I | GCNNGC | 1 cut(s) | 112 |
| CfoI | GCGC | 1 cut(s) | 116 |
| CviJI | RGCY | 8 cut(s) | 8, 44, 97, 154, 169, 185, 267, 273 |
| CviKI_1 | RGCY | 8 cut(s) | 8, 44, 97, 154, 169, 185, 267, 273 |
| DdeI | CTNAG | 1 cut(s) | 98 |
| DinI | GGCGCC | 1 cut(s) | 115 |
| DpnI | GATC | 1 cut(s) | 203 |
| DpnII | GATC | 1 cut(s) | 201 |
| EaeI | YGGCCR | 1 cut(s) | 183 |
| Eam1104I | CTCTTC | 1 cut(s) | 73 |
| EarI | CTCTTC | 1 cut(s) | 73 |
| EciI | GGCGGA | 1 cut(s) | 37 |
| Eco57I | CTGAAG | 1 cut(s) | 24 |
| EgeI | GGCGCC | 1 cut(s) | 115 |
| EheI | GGCGCC | 1 cut(s) | 115 |
| FaiI | YATR | 1 cut(s) | 304 |
| Fnu4HI | GCNGC | 4 cut(s) | 6, 186, 189, 274 |
| Fsp4HI | GCNGC | 4 cut(s) | 6, 186, 189, 274 |
| GlaI | GCGC | 1 cut(s) | 115 |
| GluI | GCNGC | 4 cut(s) | 6, 186, 189, 274 |
| GsaI | CCCAGC | 1 cut(s) | 271 |
| HaeII | RGCGCY | 1 cut(s) | 117 |
| HaeIII | GGCC | 1 cut(s) | 185 |
| HhaI | GCGC | 1 cut(s) | 116 |
| Hin1I | GRCGYC | 1 cut(s) | 114 |
| Hin6I | GCGC | 1 cut(s) | 114 |
| HinP1I | GCGC | 1 cut(s) | 114 |
| HinfI | GANTC | 1 cut(s) | 138 |
| Hpy166II | GTNNAC | 2 cut(s) | 104, 237 |
| Hpy188I | TCNGA | 1 cut(s) | 283 |
| Hpy8I | GTNNAC | 2 cut(s) | 104, 237 |
| HpyAV | CCTTC | 1 cut(s) | 278 |
| HpyCH4III | ACNGT | 3 cut(s) | 75, 195, 215 |
| HpyCH4V | TGCA | 4 cut(s) | 191, 211, 256, 293 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 14, 273 |
| HpyF3I | CTNAG | 1 cut(s) | 98 |
| Hsp92I | GRCGYC | 1 cut(s) | 114 |
| HspAI | GCGC | 1 cut(s) | 114 |
| KasI | GGCGCC | 1 cut(s) | 113 |
| Kzo9I | GATC | 1 cut(s) | 201 |
| LmnI | GCTCC | 1 cut(s) | 249 |
| LpnPI | CCDG | 5 cut(s) | 96, 186, 253, 260, 277 |
| Lsp1109I | GCAGC | 2 cut(s) | 175, 260 |
| MalI | GATC | 1 cut(s) | 203 |
| MboI | GATC | 1 cut(s) | 201 |
| MboII | GAAGA | 3 cut(s) | 30, 33, 60 |
| MluCI | AATT | 2 cut(s) | 10, 32 |
| Mly113I | GGCGCC | 1 cut(s) | 114 |
| MnlI | CCTC | 2 cut(s) | 91, 144 |
| MseI | TTAA | 1 cut(s) | 93 |
| MspA1I | CMGCKG | 2 cut(s) | 188, 267 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 14, 273 |
| NarI | GGCGCC | 1 cut(s) | 114 |
| NdeII | GATC | 1 cut(s) | 201 |
| NlaIV | GGNNCC | 1 cut(s) | 115 |
| PfeI | GAWTC | 1 cut(s) | 138 |
| PkrI | GCNGC | 4 cut(s) | 7, 187, 190, 275 |
| PluTI | GGCGCC | 1 cut(s) | 117 |
| PspFI | CCCAGC | 1 cut(s) | 267 |
| PspN4I | GGNNCC | 1 cut(s) | 115 |
| PvuII | CAGCTG | 1 cut(s) | 267 |
| SaqAI | TTAA | 1 cut(s) | 93 |
| SatI | GCNGC | 4 cut(s) | 6, 186, 189, 274 |
| Sau3AI | GATC | 1 cut(s) | 201 |
| SetI | ASST | 6 cut(s) | 46, 91, 99, 156, 269, 289 |
| SfcI | CTRYAG | 1 cut(s) | 302 |
| SfoI | GGCGCC | 1 cut(s) | 115 |
| SmlI | CTYRAG | 2 cut(s) | 155, 163 |
| SmoI | CTYRAG | 2 cut(s) | 155, 163 |
| Sse9I | AATT | 2 cut(s) | 10, 32 |
| SsiI | CCGC | 3 cut(s) | 5, 48, 186 |
| SspDI | GGCGCC | 1 cut(s) | 113 |
| TaaI | ACNGT | 3 cut(s) | 75, 195, 215 |
| TaqI | TCGA | 1 cut(s) | 136 |
| TasI | AATT | 2 cut(s) | 10, 32 |
| TauI | GCSGC | 2 cut(s) | 8, 188 |
| TfiI | GAWTC | 1 cut(s) | 138 |
| Tru1I | TTAA | 1 cut(s) | 93 |
| Tru9I | TTAA | 1 cut(s) | 93 |
| TscAI | CASTG | 2 cut(s) | 106, 220 |
| TseI | GCWGC | 2 cut(s) | 188, 273 |
| TspRI | CASTG | 2 cut(s) | 106, 220 |