Rh5BG056700

Wings apart-like protein regulation of heterochromatin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0009354
Physical Location & Seq
Reverse (-)
4646862 .. 4653838
6977 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG056700.1

Sequence Viewer

Length: 2547 bp
ATGATTGTGAGGACCTACGGCCGGCGCAAGGGAGGAGGACCAGTAGGCCTTCCCAGGACCTATTCCGACTCCACCCTAAACGACGCCGTTCGCGGCTGCGACGACGACGGTGACGTCAGCGCCGACCCGTTCAGAATCTCTCTCTCCCAAGATACGCCCCAATTCAATTTCAACTTCTCGTCGTCGCAAGACTCGTGGTCGCAGTTCGATTCTTCGGAGCCCTATCCTCCCGAATTGAAAAGGCCCAGTTCGCGAAACGGCGACGTTTTGAGGAGGCCGCCGAAGAAGACGAAGAAGGCGGCGCTGGCGACGGCGACGCTGATGGAGGCGCAGGAGTTCGGGGAGATGATGGAGCATGTGGACGAGGTCAATTTCGCGCTGGATGGGCTGAGGGAGGGTCAGCCGGTACGGATCAGAAGGGCGAGCTTGTTGTCTTTGTTGGGGATTTGCGGCACGCCGCATCAGAGACGGCTTCTGAGGACTCAGGGGATGGCAAAAACGATAATTGAGGCTATATTGGGTCTCAGTTTTGATGATACACCTAGCGATCTGGCTGCTGCAACAATTTTCTATGTTTTGACTTGTGATGGTCAGGATGATCCTCTTTTGGAATCACCAAGCTGTATTAATTTTTTGATTAGGTTTTGCAAACCAATTGTCTCAAACATTACTGAAGATAAAGCACCAAAAATTGGACGAAAGCTTTTAGCATTGCGTTTGAGTACTGACATCTCGCATTGTGCACCAAAAAGATTAGACTCCAGCTCGGCTGCTATTCTTTCCAAAGTACATGAGATTCTTGTTACTTGCAAGGAATTGAAACCAAGTTCTGCTGATGATGGTGAAATGAGCATGCCGGAGTTAAGCCCCAAATGGATAGCTTTGCTTACTATGGAGAAAGCTTGCTTATCTACTATTTCTCTTGAAGAAACAACTGGTACAGTGAGGAAGGCTGGGGGCAACTTTAAGGAAAAATTACGAGAGCTTGGAGGCCTTGATGCTGTCTTTGAGGTGTCCATGACTTGCCATTCCGAAATGGAGGGTTGGCTAAAAGGTAATTCTCCTTCTACTTGGGAAAAGGAAATCAACATGGTGCGGAGCCTGGTGCTGCTTTTGAAATGCTTGAAGATCATGGAAAATGCCACATTCTTGAGTAAAGAAAATCAGAGCCACTTGCTAGAAATGAAGGGAAAGTTGGATCCCATGGAAAAGCCCATATCTTTCACAGAACTTGTTATAAGTACCATCAGTATCCTATCAGGGCTTTATCTACATAAAAGTTTATCTGCTGCTTCCAATGATGACATGTCTCATAATCTTTCAAATGGGAATGAATATGCTTCTGAGAAAAGCTCCCACAAATGTCAGAGCAATGGATTGGTGTCCACTTCTCGCTCGGTGTATTCTGTATCCAGTTCAGAAACTACCAGCACGTCTATGACTGACACCTATTCGTTGAAGACAAGACTTAGTTCTTCCAGAAATGGCTCATCTAGTGGTACAGCAAGCCATTTAAGTGAGGCAACCCGCACATTTAGCTATGGTTCCCGGAAAGATGCTGGTTCCAGTCAGAGATCCTATATTTCTAAAACCTCTATAATTGATCTTTCGGAGGAGAGCCAAGATCCTTTTGCATTTTGCTGTGGTTCCGGTGAGGATGCTGGTCTCAGTCAGAGATCCTATATTTCTGAAGACTCTAAAGTTGACCTTTCACAGGAGAGTCAAGATCCTTTTGCATTTGATGAAGATGATATTGAACCTTCTCAGTGGGACATATTATCTGGCAAGAAAAAGATTTGTCGAACGCAAAAAAATGGAGAAGCTTACAGAGAACTTGATGATGGTTGCCAGTTGCAGCTGATTATGAGCCAAGCAGAATCAAGTATTGGGGAAGACCATGATATGCCTGAGACATCCTATGCGGGTGCTGTTAGTAAAGAGGGTTCCAGTCTTTTGGCTGACTGCCTTCTTACTGCTGTTAAGGTTCTGATGAACTTGGCAAATGAGAATCCTGTTGGTTGTCAGCAAATTGCTGCGAATGGAGGACTGGAGACCATGTCTTTCTTGATTGCTAGCCACTTTCCTTCATTTTCATCTCCCTTCAGCGAGAGAAATGACAGTACTTCAAGCATTGAACTGGATAATCAGAATGGTAGACATCTTACCGATCAAGAGCTAGATTTTCTTGTAGCTATTTTGGGCCTGCTTGTAAACTTGGTTGAGAAAGATGGTCAAAACAGATCACGGCTCGCTGCAGTCACTGTTCACTTACCTATTTCTGATGGGTTTGAAGAGGAAAGTCACAAGGATCTAATTCTGCTAATATGCTCTATATTCCTGGCTAATCAAGGTGCAGGCGAGGGATCCGAAGAAGGAAAAACTTTGCCAAATGATGAGGCAGCTGTGTTACAAGGAGAACAAGAAGCTGAGAAAATGATAGTGGAAGCTTATTCTGCCCTGCTTTTAGCATTCCTTTCAACTGAAAGGTTGTTTTGTTTTCCCTCTCTCCTGTTTTACTGCATAAAACATTTTTCTGGATATTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WAPL

Protein Analysis

848

Amino Acids

92.77

Weight (kDa)

5.0

Isoelectric Point (pI)

51.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WAPL PF07814 106 - 744 4.7e-50 Wings apart-like protein regulation of heterochromatin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1238
AasI GACNNNNNNGTC 1 cut(s) 113
AatII GACGTC 1 cut(s) 117
AccB7I CCANNNNNTGG 1 cut(s) 692
AccI GTMKAC 1 cut(s) 2155
AccII CGCG 3 cut(s) 93, 253, 377
AciI CCGC 8 cut(s) 93, 278, 299, 450, 458, 1096, 1528, 1922
AcoI YGGCCR 1 cut(s) 19
AcuI CTGAAG 3 cut(s) 693, 1710, 2086
AcyI GRCGYC 2 cut(s) 84, 114
AfaI GTAC 7 cut(s) 408, 724, 789, 940, 1243, 1501, 2122
AfiI CCNNNNNNNGG 4 cut(s) 21, 28, 692, 1714
AflIII ACRYGT 1 cut(s) 1305
AhdI GACNNNNNGTC 1 cut(s) 196
AjiI CACGTC 1 cut(s) 1434
AjnI CCWGG 3 cut(s) 53, 1101, 2337
AjuI GAANNNNNNNTTGG 4 cut(s) 1178, 1210, 1869, 1901
Alw21I GWGCWC 1 cut(s) 745
Alw26I GTCTC 7 cut(s) 460, 527, 664, 1314, 1670, 1904, 2045
Alw44I GTGCAC 1 cut(s) 741
AlwNI CAGNNNCTG 1 cut(s) 2261
AoxI GGCC 6 cut(s) 19, 46, 242, 275, 991, 2200
ApaLI GTGCAC 1 cut(s) 741
ArsI GACNNNNNNTTYG 2 cut(s) 642, 674
AseI ATTAAT 1 cut(s) 627
AspLEI GCGC 5 cut(s) 27, 122, 304, 331, 379
AspS9I GGNCC 5 cut(s) 12, 38, 57, 243, 2200
AsuC2I CCSGG 1 cut(s) 1549
AsuHPI GGTGA 4 cut(s) 122, 606, 854, 1664
AsuNHI GCTAGC 1 cut(s) 2072
AvaII GGWCC 3 cut(s) 12, 38, 57
BaeGI GKGCMC 1 cut(s) 745
BamHI GGATCC 2 cut(s) 1198, 2363
BanII GRGCYC 1 cut(s) 222
BarI GAAGNNNNNNTAC 2 cut(s) 1048, 1080
BauI CACGAG 1 cut(s) 193
BbsI GAAGAC 4 cut(s) 293, 1466, 1698, 1899
Bbv12I GWGCWC 1 cut(s) 745
BbvCI CCTCAGC 1 cut(s) 389
BceAI ACGGC 6 cut(s) 34, 71, 274, 327, 485, 2261
BcgI CGANNNNNNTGC 2 cut(s) 536, 570
BciT130I CCWGG 3 cut(s) 55, 1103, 2339
BciVI GTATCC 2 cut(s) 1262, 1420
BcnI CCSGG 1 cut(s) 1549
BcoDI GTCTC 7 cut(s) 460, 527, 664, 1314, 1670, 1904, 2045
BfaI CTAG 5 cut(s) 543, 1178, 1494, 2073, 2177
BfmI CTRYAG 1 cut(s) 2253
BfoI RGCGCY 2 cut(s) 123, 305
BfuI GTATCC 2 cut(s) 1262, 1420
BmcAI AGTACT 2 cut(s) 724, 2122
Bme1390I CCNGG 4 cut(s) 55, 1103, 1549, 2339
Bme18I GGWCC 3 cut(s) 12, 38, 57
BmeRI GACNNNNNGTC 1 cut(s) 196
BmgBI CACGTC 1 cut(s) 1434
BmgT120I GGNCC 5 cut(s) 12, 38, 57, 243, 2200
BmiI GGNNCC 8 cut(s) 219, 1100, 1200, 1546, 1564, 1648, 1945, 2365
BmrFI CCNGG 4 cut(s) 55, 1103, 1549, 2339
BmrI ACTGGG 1 cut(s) 240
BmsI GCATC 4 cut(s) 469, 988, 1546, 1648
BmtI GCTAGC 1 cut(s) 2076
BmuI ACTGGG 1 cut(s) 240
BpiI GAAGAC 4 cut(s) 293, 1466, 1698, 1899
BplI GAGNNNNNCTC 2 cut(s) 1337, 1369
BpmI CTGGAG 2 cut(s) 745, 2069
Bpu10I CCTNAGC 1 cut(s) 389
BpuEI CTTGAG 1 cut(s) 1171
BpuMI CCSGG 1 cut(s) 1549
BsaHI GRCGYC 2 cut(s) 84, 114
BsaI GGTCTC 3 cut(s) 527, 1670, 2045
BsaJI CCNNGG 2 cut(s) 53, 1203
BsaWI WCCGGW 1 cut(s) 1649
BsaXI ACNNNNNCTCC 4 cut(s) 27, 57, 2042, 2072
Bsc4I CCNNNNNNNGG 4 cut(s) 21, 28, 692, 1714
Bse118I RCCGGY 2 cut(s) 21, 403
Bse1I ACTGG 9 cut(s) 41, 246, 940, 1413, 1566, 1849, 1947, 2052, 2142
Bse3DI GCAATG 2 cut(s) 710, 1378
BseBI CCWGG 3 cut(s) 55, 1103, 2339
BseDI CCNNGG 2 cut(s) 53, 1203
BseGI GGATG 5 cut(s) 388, 495, 601, 1663, 1913
BseLI CCNNNNNNNGG 4 cut(s) 21, 28, 692, 1714
BseMI GCAATG 2 cut(s) 710, 1378
BseMII CTCAG 9 cut(s) 380, 467, 497, 538, 1335, 1681, 1778, 1899, 2418
BseNI ACTGG 9 cut(s) 41, 246, 940, 1413, 1566, 1849, 1947, 2052, 2142
BseRI GAGGAG 3 cut(s) 48, 286, 1628
BseSI GKGCMC 1 cut(s) 745
BseX3I CGGCCG 1 cut(s) 19
BseYI CCCAGC 1 cut(s) 953
BsgI GTGCAG 1 cut(s) 2373
Bsh1236I CGCG 3 cut(s) 93, 253, 377
Bsh1285I CGRYCG 1 cut(s) 22
BshFI GGCC 6 cut(s) 21, 48, 244, 277, 993, 2202
BsiEI CGRYCG 1 cut(s) 22
BsiHKAI GWGCWC 1 cut(s) 745
BsiSI CCGG 5 cut(s) 22, 404, 857, 1549, 1650
BslFI GGGAC 1 cut(s) 1784
BslI CCNNNNNNNGG 4 cut(s) 21, 28, 692, 1714
BsmAI GTCTC 7 cut(s) 460, 527, 664, 1314, 1670, 1904, 2045
BsmBI CGTCTC 1 cut(s) 460
BsmFI GGGAC 1 cut(s) 1784
BsmI GAATGC 1 cut(s) 2468
BsnI GGCC 6 cut(s) 21, 48, 244, 277, 993, 2202
Bso31I GGTCTC 3 cut(s) 527, 1670, 2045
Bsp1286I GDGCHC 2 cut(s) 222, 745
Bsp19I CCATGG 1 cut(s) 1203
Bsp68I TCGCGA 1 cut(s) 253
BspACI CCGC 8 cut(s) 93, 278, 299, 450, 458, 1096, 1528, 1922
BspANI GGCC 6 cut(s) 21, 48, 244, 277, 993, 2202
BspCNI CTCAG 9 cut(s) 381, 468, 496, 537, 1336, 1680, 1777, 1900, 2419
BspFNI CGCG 3 cut(s) 93, 253, 377
BspLI GGNNCC 8 cut(s) 219, 1100, 1200, 1546, 1564, 1648, 1945, 2365
BspMAI CTGCAG 1 cut(s) 2257
BspOI GCTAGC 1 cut(s) 2076
BspTNI GGTCTC 3 cut(s) 527, 1670, 2045
BsrDI GCAATG 2 cut(s) 710, 1378
BsrFI RCCGGY 2 cut(s) 21, 403
BsrI ACTGG 9 cut(s) 41, 246, 940, 1413, 1566, 1849, 1947, 2052, 2142
BssAI RCCGGY 2 cut(s) 21, 403
BssECI CCNNGG 2 cut(s) 53, 1203
BssNI GRCGYC 2 cut(s) 84, 114
BssSI CACGAG 1 cut(s) 193
BssT1I CCWWGG 1 cut(s) 1203
Bst2BI CACGAG 1 cut(s) 193
Bst2UI CCWGG 3 cut(s) 55, 1103, 2339
Bst4CI ACNGT 4 cut(s) 110, 943, 2120, 2263
Bst6I CTCTTC 1 cut(s) 2286
BstACI GRCGYC 2 cut(s) 84, 114
BstDSI CCRYGG 1 cut(s) 1203
BstENI CCTNNNNNAGG 1 cut(s) 1712
BstF5I GGATG 5 cut(s) 388, 495, 601, 1663, 1913
BstFNI CGCG 3 cut(s) 93, 253, 377
BstH2I RGCGCY 2 cut(s) 123, 305
BstHHI GCGC 5 cut(s) 27, 122, 304, 331, 379
BstMAI GTCTC 7 cut(s) 460, 527, 664, 1314, 1670, 1904, 2045
BstMCI CGRYCG 1 cut(s) 22
BstMWI GCNNNNNNNGC 5 cut(s) 250, 305, 385, 1536, 2453
BstNI CCWGG 3 cut(s) 55, 1103, 2339
BstNSI RCATGY 3 cut(s) 359, 856, 1309
BstSCI CCNGG 4 cut(s) 53, 1101, 1547, 2337
BstSFI CTRYAG 1 cut(s) 2253
BstSLI GKGCMC 1 cut(s) 745
BstUI CGCG 3 cut(s) 93, 253, 377
BstV2I GAAGAC 4 cut(s) 293, 1466, 1698, 1899
BstX2I RGATCY 7 cut(s) 1198, 1574, 1624, 1676, 1726, 2308, 2363
BstXI CCANNNNNNTGG 1 cut(s) 1954
BstYI RGATCY 7 cut(s) 1198, 1574, 1624, 1676, 1726, 2308, 2363
BstZI CGGCCG 1 cut(s) 19
BsuI GTATCC 2 cut(s) 1262, 1420
BsuRI GGCC 6 cut(s) 21, 48, 244, 277, 993, 2202
BtgI CCRYGG 1 cut(s) 1203
BtrI CACGTC 1 cut(s) 1434
BtsCI GGATG 5 cut(s) 388, 495, 601, 1663, 1913
BtsIMutI CAGTG 3 cut(s) 948, 1772, 2259
BtuMI TCGCGA 1 cut(s) 253
CaiI CAGNNNCTG 1 cut(s) 2261
CfoI GCGC 5 cut(s) 27, 122, 304, 331, 379
Cfr10I RCCGGY 2 cut(s) 21, 403
Cfr13I GGNCC 5 cut(s) 12, 38, 57, 243, 2200
CseI GACGC 2 cut(s) 92, 325
Csp6I GTAC 7 cut(s) 407, 723, 788, 939, 1242, 1500, 2121
CspCI CAANNNNNGTGG 2 cut(s) 176, 211
CviQI GTAC 7 cut(s) 407, 723, 788, 939, 1242, 1500, 2121
DrdI GACNNNNNNGTC 1 cut(s) 113
DriI GACNNNNNGTC 1 cut(s) 196
DseDI GACNNNNNNGTC 1 cut(s) 113
EaeI YGGCCR 1 cut(s) 19
EagI CGGCCG 1 cut(s) 19
Eam1104I CTCTTC 1 cut(s) 2286
Eam1105I GACNNNNNGTC 1 cut(s) 196
EarI CTCTTC 1 cut(s) 2286
EclXI CGGCCG 1 cut(s) 19
Eco130I CCWWGG 1 cut(s) 1203
Eco147I AGGCCT 2 cut(s) 48, 993
Eco24I GRGCYC 1 cut(s) 222
Eco31I GGTCTC 3 cut(s) 527, 1670, 2045
Eco47I GGWCC 3 cut(s) 12, 38, 57
Eco52I CGGCCG 1 cut(s) 19
Eco57I CTGAAG 3 cut(s) 693, 1710, 2086
EcoNI CCTNNNNNAGG 1 cut(s) 1712
EcoO109I RGGNCCY 2 cut(s) 12, 57
EcoRII CCWGG 3 cut(s) 53, 1101, 2337
EcoT14I CCWWGG 1 cut(s) 1203
EcoT38I GRGCYC 1 cut(s) 222
ErhI CCWWGG 1 cut(s) 1203
Esp3I CGTCTC 1 cut(s) 460
FalI AAGNNNNNCTT 2 cut(s) 1692, 1724
FaqI GGGAC 1 cut(s) 1784
FauI CCCGC 2 cut(s) 1535, 1915
FblI GTMKAC 1 cut(s) 2155
FokI GGATG 5 cut(s) 395, 502, 608, 1670, 1900
FriOI GRGCYC 1 cut(s) 222
FspBI CTAG 5 cut(s) 543, 1178, 1494, 2073, 2177
GlaI GCGC 5 cut(s) 26, 121, 303, 330, 378
GsaI CCCAGC 1 cut(s) 957
GsuI CTGGAG 2 cut(s) 745, 2069
HaeII RGCGCY 2 cut(s) 123, 305
HaeIII GGCC 6 cut(s) 21, 48, 244, 277, 993, 2202
HapII CCGG 5 cut(s) 22, 404, 857, 1549, 1650
HgaI GACGC 2 cut(s) 92, 325
HhaI GCGC 5 cut(s) 27, 122, 304, 331, 379
Hin1I GRCGYC 2 cut(s) 84, 114
Hin6I GCGC 5 cut(s) 25, 120, 302, 329, 377
HinP1I GCGC 5 cut(s) 25, 120, 302, 329, 377
HincII GTYRAC 1 cut(s) 1705
HindII GTYRAC 1 cut(s) 1705
HindIII AAGCTT 4 cut(s) 701, 900, 1821, 2445
HpaII CCGG 5 cut(s) 22, 404, 857, 1549, 1650
HphI GGTGA 4 cut(s) 122, 606, 854, 1664
Hpy166II GTNNAC 7 cut(s) 361, 743, 1386, 1705, 2156, 2212, 2266
Hpy8I GTNNAC 7 cut(s) 361, 743, 1386, 1705, 2156, 2212, 2266
Hpy99I CGWCG 9 cut(s) 86, 104, 107, 110, 184, 187, 266, 313, 319
HpyCH4III ACNGT 4 cut(s) 110, 943, 2120, 2263
HpyCH4IV ACGT 3 cut(s) 114, 264, 1433
HpyF10VI GCNNNNNNNGC 5 cut(s) 250, 305, 385, 1536, 2453
HpySE526I ACGT 3 cut(s) 114, 264, 1433
Hsp92I GRCGYC 2 cut(s) 84, 114
HspAI GCGC 5 cut(s) 25, 120, 302, 329, 377
KroI GCCGGC 1 cut(s) 21
KroNI GCCGGC 1 cut(s) 23
LmnI GCTCC 4 cut(s) 217, 352, 1098, 1358
LweI GCATC 4 cut(s) 469, 988, 1546, 1648
MaeI CTAG 5 cut(s) 543, 1178, 1494, 2073, 2177
MaeII ACGT 3 cut(s) 114, 264, 1433
MaeIII GTNAC 5 cut(s) 110, 802, 2257, 2300, 2406
MfeI CAATTG 1 cut(s) 654
MflI RGATCY 7 cut(s) 1198, 1574, 1624, 1676, 1726, 2308, 2363
MhlI GDGCHC 2 cut(s) 222, 745
MlyI GAGTC 6 cut(s) 62, 185, 475, 752, 1688, 1729
MmeI TCCRAC 2 cut(s) 90, 1176
MroNI GCCGGC 1 cut(s) 21
MseI TTAA 5 cut(s) 627, 863, 966, 1514, 1980
MslI CAYNNNNRTG 2 cut(s) 1436, 1515
MspA1I CMGCKG 2 cut(s) 1858, 2402
MspI CCGG 5 cut(s) 22, 404, 857, 1549, 1650
MspR9I CCNGG 4 cut(s) 55, 1103, 1549, 2339
MunI CAATTG 1 cut(s) 654
Mva1269I GAATGC 1 cut(s) 2468
MvaI CCWGG 3 cut(s) 55, 1103, 2339
MvnI CGCG 3 cut(s) 93, 253, 377
MwoI GCNNNNNNNGC 5 cut(s) 250, 305, 385, 1536, 2453
NaeI GCCGGC 1 cut(s) 23
NciI CCSGG 1 cut(s) 1549
NcoI CCATGG 1 cut(s) 1203
NgoMIV GCCGGC 1 cut(s) 21
NheI GCTAGC 1 cut(s) 2072
NlaIV GGNNCC 8 cut(s) 219, 1100, 1200, 1546, 1564, 1648, 1945, 2365
NmeAIII GCCGAG 1 cut(s) 746
NmuCI GTSAC 3 cut(s) 110, 2257, 2300
NruI TCGCGA 1 cut(s) 253
NspI RCATGY 3 cut(s) 359, 856, 1309
PaeI GCATGC 1 cut(s) 856
PceI AGGCCT 2 cut(s) 48, 993
PciI ACATGT 1 cut(s) 1305
PcsI WCGNNNNNNNCGW 3 cut(s) 111, 120, 191
PctI GAATGC 1 cut(s) 2468
PdiI GCCGGC 1 cut(s) 23
PfeI GAWTC 6 cut(s) 135, 209, 611, 796, 1877, 2008
PflFI GACNNNGTC 2 cut(s) 365, 2056
PflMI CCANNNNNTGG 1 cut(s) 692
PfoI TCCNGGA 1 cut(s) 1547
PleI GAGTC 6 cut(s) 62, 185, 475, 752, 1688, 1728
PpsI GAGTC 6 cut(s) 62, 185, 475, 752, 1688, 1728
PpuMI RGGWCCY 2 cut(s) 12, 57
PscI ACATGT 1 cut(s) 1305
PshBI ATTAAT 1 cut(s) 627
PsiI TTATAA 1 cut(s) 1238
Psp5II RGGWCCY 2 cut(s) 12, 57
Psp6I CCWGG 3 cut(s) 53, 1101, 2337
PspFI CCCAGC 1 cut(s) 953
PspGI CCWGG 3 cut(s) 53, 1101, 2337
PspN4I GGNNCC 8 cut(s) 219, 1100, 1200, 1546, 1564, 1648, 1945, 2365
PspPI GGNCC 5 cut(s) 12, 38, 57, 243, 2200
PspPPI RGGWCCY 2 cut(s) 12, 57
PsrI GAACNNNNNNTAC 2 cut(s) 1927, 1959
PstI CTGCAG 1 cut(s) 2257
PstNI CAGNNNCTG 1 cut(s) 2261
PsuI RGATCY 7 cut(s) 1198, 1574, 1624, 1676, 1726, 2308, 2363
PsyI GACNNNGTC 2 cut(s) 365, 2056
PvuII CAGCTG 2 cut(s) 1858, 2402
RruI TCGCGA 1 cut(s) 253
RsaI GTAC 7 cut(s) 408, 724, 789, 940, 1243, 1501, 2122
RsaNI GTAC 7 cut(s) 407, 723, 788, 939, 1242, 1500, 2121
RseI CAYNNNNRTG 2 cut(s) 1436, 1515
SaqAI TTAA 5 cut(s) 627, 863, 966, 1514, 1980
Sau96I GGNCC 5 cut(s) 12, 38, 57, 243, 2200
ScaI AGTACT 2 cut(s) 724, 2122
SchI GAGTC 6 cut(s) 62, 185, 475, 752, 1688, 1729
ScrFI CCNGG 4 cut(s) 55, 1103, 1549, 2339
SduI GDGCHC 2 cut(s) 222, 745
SfaNI GCATC 4 cut(s) 469, 988, 1546, 1648
SfcI CTRYAG 1 cut(s) 2253
SinI GGWCC 3 cut(s) 12, 38, 57
SmiMI CAYNNNNRTG 2 cut(s) 1436, 1515
SmlI CTYRAG 1 cut(s) 1150
SmoI CTYRAG 1 cut(s) 1150
SphI GCATGC 1 cut(s) 856
SseBI AGGCCT 2 cut(s) 48, 993
SsiI CCGC 8 cut(s) 93, 278, 299, 450, 458, 1096, 1528, 1922
SspMI CTAG 5 cut(s) 543, 1178, 1494, 2073, 2177
StuI AGGCCT 2 cut(s) 48, 993
StyD4I CCNGG 4 cut(s) 53, 1101, 1547, 2337
StyI CCWWGG 1 cut(s) 1203
TaaI ACNGT 4 cut(s) 110, 943, 2120, 2263
TaiI ACGT 3 cut(s) 117, 267, 1436
TaqI TCGA 2 cut(s) 207, 1801
TatI WGTACW 3 cut(s) 722, 787, 2120
TauI GCSGC 5 cut(s) 96, 280, 302, 453, 460
TfiI GAWTC 6 cut(s) 135, 209, 611, 796, 1877, 2008
Tru1I TTAA 5 cut(s) 627, 863, 966, 1514, 1980
Tru9I TTAA 5 cut(s) 627, 863, 966, 1514, 1980
TscAI CASTG 3 cut(s) 948, 1772, 2266
TseFI GTSAC 3 cut(s) 110, 2257, 2300
Tsp45I GTSAC 3 cut(s) 110, 2257, 2300
TspDTI ATGAA 6 cut(s) 1199, 1347, 1758, 2006, 2076, 2082
TspGWI ACGGA 1 cut(s) 424
TspRI CASTG 3 cut(s) 948, 1772, 2266
Tth111I GACNNNGTC 2 cut(s) 365, 2056
Van91I CCANNNNNTGG 1 cut(s) 692
VneI GTGCAC 1 cut(s) 741
VpaK11BI GGWCC 3 cut(s) 12, 38, 57
VspI ATTAAT 1 cut(s) 627
XagI CCTNNNNNAGG 1 cut(s) 1712
XceI RCATGY 3 cut(s) 359, 856, 1309
XmiI GTMKAC 1 cut(s) 2155
XspI CTAG 5 cut(s) 543, 1178, 1494, 2073, 2177
ZraI GACGTC 1 cut(s) 115
ZrmI AGTACT 2 cut(s) 724, 2122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.