Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0008757

Physical Location & Seq

Genomic Coordinates Forward (+)

2696314 .. 2698966

Gene Structure 2653 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G056300.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 747 bp

ATGCGAAGAGCCTCAAGGATCATTTCACTACCAGCTTCGAATTTCATCGCCCATGCTTCTTCTTCTGCTTGCGCTGTAAACAAACACTCCTTCACTACGTTGACTGCGCAACAAAATCATCACAACCTGCACCTGCAATCGTTTCCTGGAGATTTTCTGAAATGGGGTTCGCTTGGTTTCTTTAGGACGTCGAGCTTTGCTACTGGGTTCGCGCCCTTGAAGCCTAAGCCGTTGGGGTCCATTATTGATGTTGAGAGGGTTAAGGATCGCTCAGCCGAGGACATCGCTTCAGCTTGGGACGATTTTCACCTGGGAAGAGGTCATATTGGTGCATCCATGAAAGCAAACCTGTATCACCTGCTGGAGCATAGAGCAGCGGAATGCCGGTATTTTGTCATTCCCTTGTGGAGAGGAGGTGGTTATACTACAATGTTTGCACAAGTGCAGACGCCACACATGCTTTTCACTGGTCTTGAAGATTACAAGGCAAAGGGAACTCAAGCTGCTCCCTACTTCGCTGTAACTTACTACAATGAATTTGCGGAAAGCAAAGACATGGTGCTTATCCGTGGCGATGTCGTAATGCCCAGCAAACTCAGTGACTCAGAGGCAAAATGGCTTCTGGAGACCACCCAATCATTTTATGTGAACGATACAAGGTATAAGCTGGTTGAACGATTCAACAGACAAACACACGATTTTGAGTTCAAGGATGTCTTGCAAGCATTGGAAATACCCAATCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006996 GO:0007005 GO:0008150 GO:0009987 GO:0016043 GO:0022607 GO:0033615 GO:0034622 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043461 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0065003 GO:0070071 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ATP11

Protein Analysis

249

Amino Acids

28.12

Weight (kDa)

8.46

Isoelectric Point (pI)

35.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008757)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34050
fragaria_vesca	FvH4_3g08250 FvH4_7g02080
malus_domestica	MD05G1306300.v1.1 MD10G1285300.v1.1
prunus_persica	Prupe.4G056300_v2.0.a1 Prupe.4G056300_v2.0.a1 Prupe.4G056300_v2.0.a1 Prupe.4G056300_v2.0.a1 Prupe.4G056300_v2.0.a1 Prupe.4G056300_v2.0.a1
pyrus_communis	pycom05g28340 pycom10g23840
rosa_chinensis	RchiOBHm_Chr5g0009901
rosa_laevigata	RLG00000031707
rosa_multiflora	Rmu_sc0001709.1_g000017
rosa_roxburghii	Rroxscaffold_1G00066310
rosa_rugosa	Rorug04G0446600
rosa_samantha	Rh5AG078200 Rh5BG073100 Rh5CG085500 Rh5DG073600
rosa_wichuraiana	Rw5G007200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	141, 366
AatII	GACGTC	1 cut(s)	191
Acc16I	TGCGCA	1 cut(s)	108
Acc36I	ACCTGC	3 cut(s)	135, 141, 366
AccII	CGCG	1 cut(s)	212
AciI	CCGC	2 cut(s)	377, 542
AclWI	GGATC	2 cut(s)	26, 273
AcsI	RAATTY	2 cut(s)	40, 536
AcuI	CTGAAG	1 cut(s)	273
AcyI	GRCGYC	2 cut(s)	188, 449
AgsI	TTSAA	5 cut(s)	220, 476, 674, 682, 709
AjnI	CCWGG	2 cut(s)	145, 309
AluBI	AGCT	5 cut(s)	35, 195, 293, 503, 667
AluI	AGCT	5 cut(s)	35, 195, 293, 503, 667
Alw26I	GTCTC	1 cut(s)	620
AlwI	GGATC	2 cut(s)	26, 273
ApeKI	GCWGC	2 cut(s)	374, 503
ApoI	RAATTY	2 cut(s)	40, 536
AspLEI	GCGC	3 cut(s)	74, 109, 214
AspS9I	GGNCC	1 cut(s)	237
AsuHPI	GGTGA	2 cut(s)	299, 347
AsuII	TTCGAA	1 cut(s)	38
AvaII	GGWCC	1 cut(s)	237
BbvI	GCAGC	2 cut(s)	386, 490
BceAI	ACGGC	1 cut(s)	214
BciT130I	CCWGG	2 cut(s)	147, 311
BcoDI	GTCTC	1 cut(s)	620
BfuAI	ACCTGC	3 cut(s)	135, 141, 366
BisI	GCNGC	2 cut(s)	375, 504
BlpI	GCTNAGC	1 cut(s)	271
BlsI	GCNGC	2 cut(s)	376, 505
Bme1390I	CCNGG	2 cut(s)	147, 311
Bme18I	GGWCC	1 cut(s)	237
BmgT120I	GGNCC	1 cut(s)	237
BmiI	GGNNCC	1 cut(s)	238
BmrFI	CCNGG	2 cut(s)	147, 311
BmrI	ACTGGG	1 cut(s)	213
BmsI	GCATC	1 cut(s)	341
BmuI	ACTGGG	1 cut(s)	213
BpmI	CTGGAG	3 cut(s)	168, 383, 644
Bpu10I	CCTNAGC	1 cut(s)	225
Bpu1102I	GCTNAGC	1 cut(s)	271
Bpu14I	TTCGAA	1 cut(s)	38
BpuEI	CTTGAG	1 cut(s)	483
BsaHI	GRCGYC	2 cut(s)	188, 449
BsaI	GGTCTC	1 cut(s)	620
BsaJI	CCNNGG	3 cut(s)	276, 310, 568
BsaXI	ACNNNNNCTCC	4 cut(s)	71, 101, 400, 430
Bse118I	RCCGGY	1 cut(s)	384
Bse1I	ACTGG	2 cut(s)	208, 472
BseBI	CCWGG	2 cut(s)	147, 311
BseDI	CCNNGG	3 cut(s)	276, 310, 568
BseGI	GGATG	2 cut(s)	332, 718
BseMII	CTCAG	3 cut(s)	285, 610, 618
BseNI	ACTGG	2 cut(s)	208, 472
BseRI	GAGGAG	1 cut(s)	426
BseXI	GCAGC	2 cut(s)	386, 490
BseYI	CCCAGC	1 cut(s)	587
BsgI	GTGCAG	2 cut(s)	113, 464
Bsh1236I	CGCG	1 cut(s)	212
BsiSI	CCGG	1 cut(s)	385
BslFI	GGGAC	1 cut(s)	311
BsmAI	GTCTC	1 cut(s)	620
BsmFI	GGGAC	1 cut(s)	311
BsmI	GAATGC	1 cut(s)	386
Bso31I	GGTCTC	1 cut(s)	620
Bsp119I	TTCGAA	1 cut(s)	38
Bsp143I	GATC	2 cut(s)	18, 265
Bsp1720I	GCTNAGC	1 cut(s)	271
BspACI	CCGC	2 cut(s)	377, 542
BspCNI	CTCAG	3 cut(s)	284, 609, 617
BspFNI	CGCG	1 cut(s)	212
BspLI	GGNNCC	1 cut(s)	238
BspMI	ACCTGC	3 cut(s)	135, 141, 366
BspPI	GGATC	2 cut(s)	26, 273
BspT104I	TTCGAA	1 cut(s)	38
BspTNI	GGTCTC	1 cut(s)	620
BsrFI	RCCGGY	1 cut(s)	384
BsrI	ACTGG	2 cut(s)	208, 472
BssAI	RCCGGY	1 cut(s)	384
BssECI	CCNNGG	3 cut(s)	276, 310, 568
BssMI	GATC	2 cut(s)	18, 265
BssNI	GRCGYC	2 cut(s)	188, 449
Bst2UI	CCWGG	2 cut(s)	147, 311
Bst6I	CTCTTC	1 cut(s)	310
BstACI	GRCGYC	2 cut(s)	188, 449
BstBI	TTCGAA	1 cut(s)	38
BstC8I	GCNNGC	2 cut(s)	70, 723
BstDEI	CTNAG	4 cut(s)	225, 271, 596, 604
BstDSI	CCRYGG	1 cut(s)	568
BstF5I	GGATG	2 cut(s)	332, 718
BstFNI	CGCG	1 cut(s)	212
BstHHI	GCGC	3 cut(s)	74, 109, 214
BstKTI	GATC	2 cut(s)	21, 268
BstMAI	GTCTC	1 cut(s)	620
BstMBI	GATC	2 cut(s)	18, 265
BstMWI	GCNNNNNNNGC	2 cut(s)	220, 457
BstNI	CCWGG	2 cut(s)	147, 311
BstNSI	RCATGY	1 cut(s)	460
BstSCI	CCNGG	2 cut(s)	145, 309
BstUI	CGCG	1 cut(s)	212
BstV1I	GCAGC	2 cut(s)	386, 490
BtgI	CCRYGG	1 cut(s)	568
BtgZI	GCGATG	3 cut(s)	31, 268, 588
BtsCI	GGATG	2 cut(s)	332, 718
BtsIMutI	CAGTG	2 cut(s)	465, 604
BveI	ACCTGC	3 cut(s)	135, 141, 366
Cac8I	GCNNGC	2 cut(s)	70, 723
CfoI	GCGC	3 cut(s)	74, 109, 214
Cfr10I	RCCGGY	1 cut(s)	384
Cfr13I	GGNCC	1 cut(s)	237
CseI	GACGC	1 cut(s)	457
CviAII	CATG	4 cut(s)	53, 337, 457, 556
DdeI	CTNAG	4 cut(s)	225, 271, 596, 604
DpnI	GATC	2 cut(s)	20, 267
DpnII	GATC	2 cut(s)	18, 265
Eam1104I	CTCTTC	1 cut(s)	310
EarI	CTCTTC	1 cut(s)	310
Eco31I	GGTCTC	1 cut(s)	620
Eco47I	GGWCC	1 cut(s)	237
Eco57I	CTGAAG	1 cut(s)	273
EcoRII	CCWGG	2 cut(s)	145, 309
FaeI	CATG	4 cut(s)	56, 340, 460, 559
FaiI	YATR	9 cut(s)	54, 324, 338, 369, 423, 458, 557, 645, 663
FalI	AAGNNNNNCTT	2 cut(s)	701, 733
FaqI	GGGAC	1 cut(s)	311
FatI	CATG	4 cut(s)	52, 336, 456, 555
Fnu4HI	GCNGC	2 cut(s)	375, 504
FokI	GGATG	2 cut(s)	319, 725
Fsp4HI	GCNGC	2 cut(s)	375, 504
FspI	TGCGCA	1 cut(s)	108
GlaI	GCGC	3 cut(s)	73, 108, 213
GluI	GCNGC	2 cut(s)	375, 504
GsaI	CCCAGC	1 cut(s)	591
GsuI	CTGGAG	3 cut(s)	168, 383, 644
HapII	CCGG	1 cut(s)	385
HgaI	GACGC	1 cut(s)	457
HhaI	GCGC	3 cut(s)	74, 109, 214
Hin1I	GRCGYC	2 cut(s)	188, 449
Hin1II	CATG	4 cut(s)	56, 340, 460, 559
Hin6I	GCGC	3 cut(s)	72, 107, 212
HinP1I	GCGC	3 cut(s)	72, 107, 212
HincII	GTYRAC	1 cut(s)	102
HindII	GTYRAC	1 cut(s)	102
HinfI	GANTC	2 cut(s)	602, 678
HpaII	CCGG	1 cut(s)	385
HphI	GGTGA	2 cut(s)	299, 347
Hpy166II	GTNNAC	3 cut(s)	79, 102, 649
Hpy188I	TCNGA	2 cut(s)	159, 607
Hpy188III	TCNNGA	2 cut(s)	473, 623
Hpy8I	GTNNAC	3 cut(s)	79, 102, 649
Hpy99I	CGWCG	1 cut(s)	193
HpyAV	CCTTC	1 cut(s)	100
HpyCH4IV	ACGT	2 cut(s)	98, 188
HpyCH4V	TGCA	6 cut(s)	130, 136, 332, 437, 445, 721
HpyF10VI	GCNNNNNNNGC	2 cut(s)	220, 457
HpyF3I	CTNAG	4 cut(s)	225, 271, 596, 604
HpySE526I	ACGT	2 cut(s)	98, 188
Hsp92I	GRCGYC	2 cut(s)	188, 449
Hsp92II	CATG	4 cut(s)	56, 340, 460, 559
HspAI	GCGC	3 cut(s)	72, 107, 212
Kzo9I	GATC	2 cut(s)	18, 265
LmnI	GCTCC	2 cut(s)	364, 511
Lsp1109I	GCAGC	2 cut(s)	386, 490
LweI	GCATC	1 cut(s)	341
MaeII	ACGT	2 cut(s)	98, 188
MaeIII	GTNAC	2 cut(s)	520, 599
MalI	GATC	2 cut(s)	20, 267
MboI	GATC	2 cut(s)	18, 265
MboII	GAAGA	5 cut(s)	18, 51, 54, 327, 488
MluCI	AATT	2 cut(s)	40, 536
MlyI	GAGTC	1 cut(s)	596
MnlI	CCTC	7 cut(s)	22, 249, 271, 311, 404, 407, 601
MseI	TTAA	1 cut(s)	261
MslI	CAYNNNNRTG	1 cut(s)	327
MspA1I	CMGCKG	1 cut(s)	377
MspI	CCGG	1 cut(s)	385
MspR9I	CCNGG	2 cut(s)	147, 311
Mva1269I	GAATGC	1 cut(s)	386
MvaI	CCWGG	2 cut(s)	147, 311
MvnI	CGCG	1 cut(s)	212
MwoI	GCNNNNNNNGC	2 cut(s)	220, 457
NdeII	GATC	2 cut(s)	18, 265
NlaIII	CATG	4 cut(s)	56, 340, 460, 559
NlaIV	GGNNCC	1 cut(s)	238
NmeAIII	GCCGAG	1 cut(s)	301
NmuCI	GTSAC	1 cut(s)	599
NsbI	TGCGCA	1 cut(s)	108
NspI	RCATGY	1 cut(s)	460
NspV	TTCGAA	1 cut(s)	38
PaqCI	CACCTGC	2 cut(s)	141, 366
PctI	GAATGC	1 cut(s)	386
PfeI	GAWTC	1 cut(s)	678
PfoI	TCCNGGA	1 cut(s)	145
PkrI	GCNGC	2 cut(s)	376, 505
PleI	GAGTC	1 cut(s)	596
PpsI	GAGTC	1 cut(s)	596
Psp6I	CCWGG	2 cut(s)	145, 309
PspFI	CCCAGC	1 cut(s)	587
PspGI	CCWGG	2 cut(s)	145, 309
PspN4I	GGNNCC	1 cut(s)	238
PspPI	GGNCC	1 cut(s)	237
RseI	CAYNNNNRTG	1 cut(s)	327
SaqAI	TTAA	1 cut(s)	261
SatI	GCNGC	2 cut(s)	375, 504
Sau3AI	GATC	2 cut(s)	18, 265
Sau96I	GGNCC	1 cut(s)	237
SchI	GAGTC	1 cut(s)	596
ScrFI	CCNGG	2 cut(s)	147, 311
SfaNI	GCATC	1 cut(s)	341
SfuI	TTCGAA	1 cut(s)	38
SinI	GGWCC	1 cut(s)	237
SmiMI	CAYNNNNRTG	1 cut(s)	327
SmlI	CTYRAG	2 cut(s)	13, 498
SmoI	CTYRAG	2 cut(s)	13, 498
Sse9I	AATT	2 cut(s)	40, 536
SsiI	CCGC	2 cut(s)	377, 542
StyD4I	CCNGG	2 cut(s)	145, 309
TaiI	ACGT	2 cut(s)	101, 191
TaqI	TCGA	2 cut(s)	38, 191
TasI	AATT	2 cut(s)	40, 536
TfiI	GAWTC	1 cut(s)	678
Tru1I	TTAA	1 cut(s)	261
Tru9I	TTAA	1 cut(s)	261
TscAI	CASTG	2 cut(s)	472, 604
TseFI	GTSAC	1 cut(s)	599
TseI	GCWGC	2 cut(s)	374, 503
Tsp45I	GTSAC	1 cut(s)	599
TspDTI	ATGAA	3 cut(s)	34, 353, 549
TspGWI	ACGGA	1 cut(s)	557
TspRI	CASTG	2 cut(s)	472, 604
VpaK11BI	GGWCC	1 cut(s)	237
XapI	RAATTY	2 cut(s)	40, 536
XceI	RCATGY	1 cut(s)	460
ZraI	GACGTC	1 cut(s)	189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.