Ribonuclease H2 subunit C-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G39440 AT2G39440 |
| fragaria_vesca | FvH4_3g12150 FvH4_3g12150 |
| malus_domestica | MD05G1254400.v1.1 MD10G1234600.v1.1 |
| prunus_persica | Prupe.4G110300_v2.0.a1 |
| pyrus_communis | pycom10g19640 |
| rosa_chinensis | RchiOBHm_Chr5g0019891 |
| rosa_laevigata | RLG00000032482 |
| rosa_multiflora | Rmu_sc0000344.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00058280 |
| rosa_rugosa | Rorug05G0054900.1 Rorug05G0055000.1 Rorug05G0055100 Rorug05G0055200 |
| rosa_samantha | Rh5AG144900 Rh5BG144600 Rh5CG155900 Rh5DG143900 |
| rosa_wichuraiana | Rw5G012810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 111 |
| Acc36I | ACCTGC | 1 cut(s) | 111 |
| AciI | CCGC | 3 cut(s) | 80, 464, 486 |
| AcuI | CTGAAG | 1 cut(s) | 336 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 394 |
| AgsI | TTSAA | 1 cut(s) | 157 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 244, 276 |
| AluBI | AGCT | 1 cut(s) | 206 |
| AluI | AGCT | 1 cut(s) | 206 |
| Alw21I | GWGCWC | 1 cut(s) | 102 |
| Alw44I | GTGCAC | 1 cut(s) | 98 |
| AoxI | GGCC | 1 cut(s) | 130 |
| ApaLI | GTGCAC | 1 cut(s) | 98 |
| ApeKI | GCWGC | 1 cut(s) | 488 |
| AspS9I | GGNCC | 2 cut(s) | 21, 131 |
| AvaII | GGWCC | 1 cut(s) | 21 |
| BaeGI | GKGCMC | 1 cut(s) | 102 |
| Bbv12I | GWGCWC | 1 cut(s) | 102 |
| BbvI | GCAGC | 1 cut(s) | 475 |
| BccI | CCATC | 2 cut(s) | 125, 254 |
| BfaI | CTAG | 1 cut(s) | 275 |
| BfmI | CTRYAG | 1 cut(s) | 432 |
| BfuAI | ACCTGC | 1 cut(s) | 111 |
| BisI | GCNGC | 1 cut(s) | 489 |
| BlsI | GCNGC | 1 cut(s) | 490 |
| Bme18I | GGWCC | 1 cut(s) | 21 |
| BmgT120I | GGNCC | 2 cut(s) | 21, 131 |
| BmiI | GGNNCC | 3 cut(s) | 13, 22, 235 |
| BmsI | GCATC | 3 cut(s) | 369, 391, 491 |
| BpuEI | CTTGAG | 1 cut(s) | 106 |
| BsaJI | CCNNGG | 1 cut(s) | 16 |
| BsaWI | WCCGGW | 1 cut(s) | 170 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 394 |
| Bse1I | ACTGG | 1 cut(s) | 428 |
| BseDI | CCNNGG | 1 cut(s) | 16 |
| BseGI | GGATG | 3 cut(s) | 246, 403, 482 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 394 |
| BseMII | CTCAG | 2 cut(s) | 23, 174 |
| BseNI | ACTGG | 1 cut(s) | 428 |
| BseSI | GKGCMC | 1 cut(s) | 102 |
| BseXI | GCAGC | 1 cut(s) | 475 |
| BshFI | GGCC | 1 cut(s) | 132 |
| BsiHKAI | GWGCWC | 1 cut(s) | 102 |
| BsiSI | CCGG | 1 cut(s) | 171 |
| BslFI | GGGAC | 1 cut(s) | 34 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 394 |
| BsmFI | GGGAC | 1 cut(s) | 34 |
| BsnI | GGCC | 1 cut(s) | 132 |
| Bsp1286I | GDGCHC | 1 cut(s) | 102 |
| BspACI | CCGC | 3 cut(s) | 80, 464, 486 |
| BspANI | GGCC | 1 cut(s) | 132 |
| BspCNI | CTCAG | 2 cut(s) | 24, 175 |
| BspHI | TCATGA | 1 cut(s) | 376 |
| BspLI | GGNNCC | 3 cut(s) | 13, 22, 235 |
| BspMI | ACCTGC | 1 cut(s) | 111 |
| BsrI | ACTGG | 1 cut(s) | 428 |
| BssECI | CCNNGG | 1 cut(s) | 16 |
| BssT1I | CCWWGG | 1 cut(s) | 16 |
| Bst4CI | ACNGT | 1 cut(s) | 332 |
| Bst6I | CTCTTC | 1 cut(s) | 278 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 488 |
| BstC8I | GCNNGC | 1 cut(s) | 429 |
| BstDEI | CTNAG | 2 cut(s) | 32, 183 |
| BstF5I | GGATG | 3 cut(s) | 246, 403, 482 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 488 |
| BstSFI | CTRYAG | 1 cut(s) | 432 |
| BstSLI | GKGCMC | 1 cut(s) | 102 |
| BstV1I | GCAGC | 1 cut(s) | 475 |
| BsuRI | GGCC | 1 cut(s) | 132 |
| BtsCI | GGATG | 3 cut(s) | 246, 403, 482 |
| BtsIMutI | CAGTG | 1 cut(s) | 421 |
| BveI | ACCTGC | 1 cut(s) | 111 |
| Cac8I | GCNNGC | 1 cut(s) | 429 |
| CciI | TCATGA | 1 cut(s) | 376 |
| Cfr13I | GGNCC | 2 cut(s) | 21, 131 |
| CseI | GACGC | 1 cut(s) | 205 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 157, 192 |
| CviAII | CATG | 1 cut(s) | 377 |
| CviJI | RGCY | 7 cut(s) | 55, 132, 206, 236, 305, 384, 427 |
| CviKI_1 | RGCY | 7 cut(s) | 55, 132, 206, 236, 305, 384, 427 |
| DdeI | CTNAG | 2 cut(s) | 32, 183 |
| DraI | TTTAAA | 1 cut(s) | 192 |
| Eam1104I | CTCTTC | 1 cut(s) | 278 |
| EarI | CTCTTC | 1 cut(s) | 278 |
| EciI | GGCGGA | 1 cut(s) | 95 |
| Eco130I | CCWWGG | 1 cut(s) | 16 |
| Eco47I | GGWCC | 1 cut(s) | 21 |
| Eco57I | CTGAAG | 1 cut(s) | 336 |
| EcoT14I | CCWWGG | 1 cut(s) | 16 |
| ErhI | CCWWGG | 1 cut(s) | 16 |
| FaeI | CATG | 1 cut(s) | 380 |
| FaiI | YATR | 5 cut(s) | 26, 354, 367, 378, 446 |
| FaqI | GGGAC | 1 cut(s) | 34 |
| FatI | CATG | 1 cut(s) | 376 |
| Fnu4HI | GCNGC | 1 cut(s) | 489 |
| FokI | GGATG | 3 cut(s) | 233, 410, 469 |
| Fsp4HI | GCNGC | 1 cut(s) | 489 |
| FspBI | CTAG | 1 cut(s) | 275 |
| GluI | GCNGC | 1 cut(s) | 489 |
| HaeIII | GGCC | 1 cut(s) | 132 |
| HapII | CCGG | 1 cut(s) | 171 |
| HgaI | GACGC | 1 cut(s) | 205 |
| Hin1II | CATG | 1 cut(s) | 380 |
| HinfI | GANTC | 3 cut(s) | 179, 286, 373 |
| HpaII | CCGG | 1 cut(s) | 171 |
| Hpy166II | GTNNAC | 1 cut(s) | 100 |
| Hpy188I | TCNGA | 4 cut(s) | 33, 184, 215, 316 |
| Hpy188III | TCNNGA | 2 cut(s) | 264, 377 |
| Hpy8I | GTNNAC | 1 cut(s) | 100 |
| HpyAV | CCTTC | 4 cut(s) | 144, 213, 311, 399 |
| HpyCH4III | ACNGT | 1 cut(s) | 332 |
| HpyCH4IV | ACGT | 1 cut(s) | 412 |
| HpyCH4V | TGCA | 4 cut(s) | 100, 229, 448, 482 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 488 |
| HpyF3I | CTNAG | 2 cut(s) | 32, 183 |
| HpySE526I | ACGT | 1 cut(s) | 412 |
| Hsp92II | CATG | 1 cut(s) | 380 |
| LmnI | GCTCC | 3 cut(s) | 111, 119, 233 |
| Lsp1109I | GCAGC | 1 cut(s) | 475 |
| LweI | GCATC | 3 cut(s) | 369, 391, 491 |
| MaeI | CTAG | 1 cut(s) | 275 |
| MaeII | ACGT | 1 cut(s) | 412 |
| MboII | GAAGA | 8 cut(s) | 48, 71, 74, 77, 80, 292, 295, 479 |
| MhlI | GDGCHC | 1 cut(s) | 102 |
| MluCI | AATT | 2 cut(s) | 174, 208 |
| MlyI | GAGTC | 2 cut(s) | 188, 295 |
| MnlI | CCTC | 5 cut(s) | 148, 178, 209, 247, 395 |
| MseI | TTAA | 1 cut(s) | 191 |
| MspA1I | CMGCKG | 2 cut(s) | 464, 488 |
| MspI | CCGG | 1 cut(s) | 171 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 488 |
| NlaIII | CATG | 1 cut(s) | 380 |
| NlaIV | GGNNCC | 3 cut(s) | 13, 22, 235 |
| PagI | TCATGA | 1 cut(s) | 376 |
| PaqCI | CACCTGC | 1 cut(s) | 111 |
| PfeI | GAWTC | 1 cut(s) | 373 |
| PkrI | GCNGC | 1 cut(s) | 490 |
| PleI | GAGTC | 2 cut(s) | 187, 294 |
| PpsI | GAGTC | 2 cut(s) | 187, 294 |
| PspN4I | GGNNCC | 3 cut(s) | 13, 22, 235 |
| PspPI | GGNCC | 2 cut(s) | 21, 131 |
| SaqAI | TTAA | 1 cut(s) | 191 |
| SatI | GCNGC | 1 cut(s) | 489 |
| Sau96I | GGNCC | 2 cut(s) | 21, 131 |
| SchI | GAGTC | 2 cut(s) | 188, 295 |
| SduI | GDGCHC | 1 cut(s) | 102 |
| SetI | ASST | 4 cut(s) | 99, 105, 208, 415 |
| SfaNI | GCATC | 3 cut(s) | 369, 391, 491 |
| SfcI | CTRYAG | 1 cut(s) | 432 |
| SinI | GGWCC | 1 cut(s) | 21 |
| SmlI | CTYRAG | 1 cut(s) | 85 |
| SmoI | CTYRAG | 1 cut(s) | 85 |
| Sse9I | AATT | 2 cut(s) | 174, 208 |
| SsiI | CCGC | 3 cut(s) | 80, 464, 486 |
| SspMI | CTAG | 1 cut(s) | 275 |
| StyI | CCWWGG | 1 cut(s) | 16 |
| TaaI | ACNGT | 1 cut(s) | 332 |
| TaiI | ACGT | 1 cut(s) | 415 |
| TasI | AATT | 2 cut(s) | 174, 208 |
| TfiI | GAWTC | 1 cut(s) | 373 |
| Tru1I | TTAA | 1 cut(s) | 191 |
| Tru9I | TTAA | 1 cut(s) | 191 |
| TscAI | CASTG | 1 cut(s) | 428 |
| TseI | GCWGC | 1 cut(s) | 488 |
| TspDTI | ATGAA | 1 cut(s) | 356 |
| TspRI | CASTG | 1 cut(s) | 428 |
| VneI | GTGCAC | 1 cut(s) | 98 |
| VpaK11BI | GGWCC | 1 cut(s) | 21 |
| XspI | CTAG | 1 cut(s) | 275 |