Prupe.4G124800_v2.0.a1

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
6810318 .. 6813507
3190 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G124800.1

Sequence Viewer

Length: 1488 bp
ATGAAGTTGAGGTCAGGTTCAATCCTCTTCTTCATCTTCTTGCTCTCTGCCATCCATGGCCTTGCGTTTGCTCATGCAGATCATGATGAGGAAGATGGTGACAATGGTGATGAGATGAGGCTGGAGATGATACACAGGTACTCTCCACATGCCAAAGACCATGGTGTGCATGGAGAGATACCTCCAACCCAGCAAGCGCTCATCCAGGAGCTACACCGCCACGATGTCTTTAGACTTCAAATGATGGCCCAAAAGAGGCAACAAAACGGCCATGATCAAGGCCTCAACAGCAGCAGCAGCAGCAACAGCACAAGGAGAATGGATATGCAAACAAGACTCTCCGTGACAATGCCGATGAATGCCGGTTGGGATTATGGTATCGGGCAGTACCTGGTGAAGCTCAAATTAGGAACACCTGCCCAGAAATTCACGGTGATTCCAAGTACAGGCAGTGACTTGACATGGGTGAGATGCGGAAGCCATTGCGGTAAGAGTTGTGGCATACGCAAAGGCAGGATAGACCACAGTAGGGTGTTCAATACAGATCGCTCTTCTACATTCAAATCCGTTACATGTTCTTCTAAGATGTGCGAGTTTGATCTTGCCAACTTTAACTCTCTCAATAAATGCCCTCGCCCTTTAAGCCCTTGCAGATATGATTACAGCTACGTGGAAGGGTCTTCTGCATTGGGAACCTTTGGCACCGATATTGTAAGAGCATCCCTGTCAAATGGTAGGAGAAACAGAATGAAAGATGTGCTAATTGGTTGCACGGAATCCATCATAGGCAAAGGAACCGCCAAAGGAAGTGATGGCATATTAGGGTTGGGATTTGGCAAGTACTCATTCACAACAAAAGCAGCTCTAAAGTATGGTGGCAAGGTATCTTATTGCCTGCTTGATCACATGAGCCCCAAGAATGTCACAAGTTATCTCACATTTGGAGACAACAAGAAAGCTGTATTGCAGGGCAAAATGAGATACACACAGCTGGTTTTCGGTAACCCTAATAAGGGTTCGTTTTACGGCGTAAACCTACAGGGGATCTCCGTTGGAGGCAAAATGTTAAATATACCACTCCACATATGGAACCCAAAACTTGGTGGTGGTGCACTTGTTGATTCGGGCATGAGCCTAACATTTCTGACCAAGCCAGCATACAAGCCTGTCATGACTGCCTTGACAATGCCTTTGACAAAGTTCAGAAGATTGCGATCAGAAGAAGACGATTTTGACTTCTGCTTCGACCCCAGAGGATATAGAGACCGTTTGGTCCCAAAGTTGGTGTTTCATTTTGCAGGTGGAGCAAAGTTTGCGCCACCAGTGAAGAGCTATGTTATTGATGTATCGCCTGGGATGAAGTGTATTGGAATTCTCCCACTTGCTGAGGGCGCCTGTATTATTGGCAACATAATTCAGCAAAACCATTTGTGGGAATTCAATTTGGTGCGGAAAACCTTGGGTTTTGCTCCTTCAACCTGCACCTAG

Protein Analysis

496

Amino Acids

54.69

Weight (kDa)

9.44

Isoelectric Point (pI)

43.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 424, 1289
AasI GACNNNNNNGTC 1 cut(s) 1271
Acc36I ACCTGC 2 cut(s) 424, 1289
AccB1I GGYRCC 2 cut(s) 701, 1391
AccB7I CCANNNNNTGG 1 cut(s) 1100
AciI CCGC 5 cut(s) 217, 474, 486, 798, 1450
AclWI GGATC 1 cut(s) 1052
AcoI YGGCCR 1 cut(s) 268
AcsI RAATTY 3 cut(s) 425, 1371, 1436
AcyI GRCGYC 1 cut(s) 1392
AfaI GTAC 4 cut(s) 140, 389, 445, 842
AfeI AGCGCT 1 cut(s) 198
AfiI CCNNNNNNNGG 8 cut(s) 255, 446, 529, 1012, 1013, 1100, 1282, 1432
AflIII ACRYGT 1 cut(s) 572
AgsI TTSAA 6 cut(s) 21, 239, 538, 562, 1441, 1476
AjnI CCWGG 3 cut(s) 204, 390, 1351
AluBI AGCT 7 cut(s) 211, 400, 666, 863, 959, 991, 1332
AluI AGCT 7 cut(s) 211, 400, 666, 863, 959, 991, 1332
Alw21I GWGCWC 1 cut(s) 1114
Alw26I GTCTC 2 cut(s) 939, 1257
Alw44I GTGCAC 1 cut(s) 1110
AlwI GGATC 1 cut(s) 1052
AlwNI CAGNNNCTG 1 cut(s) 391
Aor51HI AGCGCT 1 cut(s) 198
AoxI GGCC 4 cut(s) 58, 246, 268, 280
ApaLI GTGCAC 1 cut(s) 1110
ApeKI GCWGC 5 cut(s) 291, 294, 297, 300, 860
ApoI RAATTY 3 cut(s) 425, 1371, 1436
ArsI GACNNNNNNTTYG 4 cut(s) 1174, 1206, 1226, 1258
AspLEI GCGC 3 cut(s) 199, 1318, 1394
AspS9I GGNCC 2 cut(s) 247, 1273
AsuHPI GGTGA 5 cut(s) 110, 119, 406, 445, 478
AvaII GGWCC 1 cut(s) 1273
BaeGI GKGCMC 1 cut(s) 1114
BaeI ACNNNNGTAYC 2 cut(s) 122, 155
BanI GGYRCC 2 cut(s) 701, 1391
BanII GRGCYC 1 cut(s) 914
BbsI GAAGAC 2 cut(s) 672, 1230
Bbv12I GWGCWC 1 cut(s) 1114
BbvCI CCTCAGC 1 cut(s) 1386
BbvI GCAGC 5 cut(s) 303, 306, 309, 312, 872
BccI CCATC 5 cut(s) 59, 89, 238, 788, 806
BceAI ACGGC 2 cut(s) 283, 1042
BciT130I CCWGG 3 cut(s) 206, 392, 1353
BclI TGATCA 2 cut(s) 274, 901
BcoDI GTCTC 2 cut(s) 939, 1257
BfaI CTAG 1 cut(s) 1486
BfmI CTRYAG 1 cut(s) 1037
BfoI RGCGCY 2 cut(s) 200, 1395
BfuAI ACCTGC 2 cut(s) 424, 1289
BisI GCNGC 5 cut(s) 292, 295, 298, 301, 861
BlsI GCNGC 5 cut(s) 293, 296, 299, 302, 862
BmcAI AGTACT 1 cut(s) 842
Bme1390I CCNGG 3 cut(s) 206, 392, 1353
Bme18I GGWCC 1 cut(s) 1273
BmgT120I GGNCC 2 cut(s) 247, 1273
BmiI GGNNCC 6 cut(s) 694, 703, 796, 1091, 1275, 1393
BmrFI CCNGG 3 cut(s) 206, 392, 1353
BmsI GCATC 2 cut(s) 461, 728
BpiI GAAGAC 2 cut(s) 672, 1230
BpmI CTGGAG 1 cut(s) 143
Bpu10I CCTNAGC 1 cut(s) 1386
BsaAI YACGTR 1 cut(s) 670
BsaBI GATNNNNATC 1 cut(s) 1213
BsaHI GRCGYC 1 cut(s) 1392
BsaI GGTCTC 1 cut(s) 1257
BsaJI CCNNGG 4 cut(s) 55, 160, 1352, 1458
Bsc4I CCNNNNNNNGG 8 cut(s) 255, 446, 529, 1012, 1013, 1100, 1282, 1432
Bse118I RCCGGY 1 cut(s) 362
Bse1I ACTGG 1 cut(s) 1322
Bse3DI GCAATG 1 cut(s) 481
Bse8I GATNNNNATC 1 cut(s) 1213
BseBI CCWGG 3 cut(s) 206, 392, 1353
BseDI CCNNGG 4 cut(s) 55, 160, 1352, 1458
BseGI GGATG 4 cut(s) 51, 201, 719, 1362
BseJI GATNNNNATC 1 cut(s) 1213
BseLI CCNNNNNNNGG 8 cut(s) 255, 446, 529, 1012, 1013, 1100, 1282, 1432
BseMI GCAATG 1 cut(s) 481
BseMII CTCAG 1 cut(s) 1377
BseNI ACTGG 1 cut(s) 1322
BseSI GKGCMC 1 cut(s) 1114
BseXI GCAGC 5 cut(s) 303, 306, 309, 312, 872
BseYI CCCAGC 1 cut(s) 189
BsgI GTGCAG 1 cut(s) 1465
BshFI GGCC 4 cut(s) 60, 248, 270, 282
BshNI GGYRCC 2 cut(s) 701, 1391
BsiHKAI GWGCWC 1 cut(s) 1114
BsiSI CCGG 1 cut(s) 363
BslFI GGGAC 1 cut(s) 1259
BslI CCNNNNNNNGG 8 cut(s) 255, 446, 529, 1012, 1013, 1100, 1282, 1432
BsmAI GTCTC 2 cut(s) 939, 1257
BsmFI GGGAC 1 cut(s) 1259
BsmI GAATGC 1 cut(s) 364
BsnI GGCC 4 cut(s) 60, 248, 270, 282
Bso31I GGTCTC 1 cut(s) 1257
Bsp1286I GDGCHC 2 cut(s) 914, 1114
Bsp143I GATC 7 cut(s) 79, 274, 544, 598, 901, 1044, 1214
Bsp19I CCATGG 2 cut(s) 55, 160
BspACI CCGC 5 cut(s) 217, 474, 486, 798, 1450
BspANI GGCC 4 cut(s) 60, 248, 270, 282
BspCNI CTCAG 1 cut(s) 1378
BspHI TCATGA 2 cut(s) 82, 1170
BspLI GGNNCC 6 cut(s) 694, 703, 796, 1091, 1275, 1393
BspMI ACCTGC 2 cut(s) 424, 1289
BspPI GGATC 1 cut(s) 1052
BspQI GCTCTTC 2 cut(s) 556, 1322
BspT107I GGYRCC 2 cut(s) 701, 1391
BspTNI GGTCTC 1 cut(s) 1257
BsrDI GCAATG 1 cut(s) 481
BsrFI RCCGGY 1 cut(s) 362
BsrI ACTGG 1 cut(s) 1322
BssAI RCCGGY 1 cut(s) 362
BssECI CCNNGG 4 cut(s) 55, 160, 1352, 1458
BssMI GATC 7 cut(s) 79, 274, 544, 598, 901, 1044, 1214
BssNI GRCGYC 1 cut(s) 1392
BssT1I CCWWGG 3 cut(s) 55, 160, 1458
Bst2UI CCWGG 3 cut(s) 206, 392, 1353
Bst4CI ACNGT 3 cut(s) 433, 527, 1268
Bst6I CTCTTC 3 cut(s) 32, 556, 1322
BstACI GRCGYC 1 cut(s) 1392
BstAPI GCANNNNNTGC 1 cut(s) 1313
BstBAI YACGTR 1 cut(s) 670
BstC8I GCNNGC 3 cut(s) 195, 896, 1155
BstDEI CTNAG 2 cut(s) 582, 1386
BstDSI CCRYGG 2 cut(s) 55, 160
BstEII GGTNACC 1 cut(s) 1001
BstF5I GGATG 4 cut(s) 51, 201, 719, 1362
BstH2I RGCGCY 2 cut(s) 200, 1395
BstHHI GCGC 3 cut(s) 199, 1318, 1394
BstKTI GATC 7 cut(s) 82, 277, 547, 601, 904, 1047, 1217
BstMAI GTCTC 2 cut(s) 939, 1257
BstMBI GATC 7 cut(s) 79, 274, 544, 598, 901, 1044, 1214
BstMWI GCNNNNNNNGC 8 cut(s) 288, 297, 300, 306, 642, 1304, 1313, 1391
BstNI CCWGG 3 cut(s) 206, 392, 1353
BstNSI RCATGY 2 cut(s) 152, 576
BstPI GGTNACC 1 cut(s) 1001
BstSCI CCNGG 3 cut(s) 204, 390, 1351
BstSFI CTRYAG 1 cut(s) 1037
BstSLI GKGCMC 1 cut(s) 1114
BstV1I GCAGC 5 cut(s) 303, 306, 309, 312, 872
BstV2I GAAGAC 2 cut(s) 672, 1230
BstX2I RGATCY 1 cut(s) 1044
BstYI RGATCY 1 cut(s) 1044
BsuRI GGCC 4 cut(s) 60, 248, 270, 282
BtgI CCRYGG 2 cut(s) 55, 160
BtsCI GGATG 4 cut(s) 51, 201, 719, 1362
BtsI GCAGTG 1 cut(s) 457
BtsIMutI CAGTG 2 cut(s) 457, 1329
BveI ACCTGC 2 cut(s) 424, 1289
Cac8I GCNNGC 3 cut(s) 195, 896, 1155
CaiI CAGNNNCTG 1 cut(s) 391
CciI TCATGA 2 cut(s) 82, 1170
CfoI GCGC 3 cut(s) 199, 1318, 1394
Cfr10I RCCGGY 1 cut(s) 362
Cfr13I GGNCC 2 cut(s) 247, 1273
CsiI ACCWGGT 1 cut(s) 390
Csp6I GTAC 4 cut(s) 139, 388, 444, 841
CviQI GTAC 4 cut(s) 139, 388, 444, 841
DdeI CTNAG 2 cut(s) 582, 1386
DinI GGCGCC 1 cut(s) 1393
DpnI GATC 7 cut(s) 81, 276, 546, 600, 903, 1046, 1216
DpnII GATC 7 cut(s) 79, 274, 544, 598, 901, 1044, 1214
DrdI GACNNNNNNGTC 1 cut(s) 1271
DseDI GACNNNNNNGTC 1 cut(s) 1271
EaeI YGGCCR 1 cut(s) 268
Eam1104I CTCTTC 3 cut(s) 32, 556, 1322
EarI CTCTTC 3 cut(s) 32, 556, 1322
Eco130I CCWWGG 3 cut(s) 55, 160, 1458
Eco147I AGGCCT 1 cut(s) 282
Eco24I GRGCYC 1 cut(s) 914
Eco31I GGTCTC 1 cut(s) 1257
Eco47I GGWCC 1 cut(s) 1273
Eco47III AGCGCT 1 cut(s) 198
Eco91I GGTNACC 1 cut(s) 1001
EcoO65I GGTNACC 1 cut(s) 1001
EcoRI GAATTC 2 cut(s) 1371, 1436
EcoRII CCWGG 3 cut(s) 204, 390, 1351
EcoT14I CCWWGG 3 cut(s) 55, 160, 1458
EcoT38I GRGCYC 1 cut(s) 914
EgeI GGCGCC 1 cut(s) 1393
EheI GGCGCC 1 cut(s) 1393
ErhI CCWWGG 3 cut(s) 55, 160, 1458
FaqI GGGAC 1 cut(s) 1259
FauNDI CATATG 1 cut(s) 1085
FbaI TGATCA 2 cut(s) 274, 901
Fnu4HI GCNGC 5 cut(s) 292, 295, 298, 301, 861
FokI GGATG 4 cut(s) 38, 188, 706, 1369
FriOI GRGCYC 1 cut(s) 914
Fsp4HI GCNGC 5 cut(s) 292, 295, 298, 301, 861
FspBI CTAG 1 cut(s) 1486
GlaI GCGC 3 cut(s) 198, 1317, 1393
GluI GCNGC 5 cut(s) 292, 295, 298, 301, 861
GsaI CCCAGC 1 cut(s) 193
GsuI CTGGAG 1 cut(s) 143
HaeII RGCGCY 2 cut(s) 200, 1395
HaeIII GGCC 4 cut(s) 60, 248, 270, 282
HapII CCGG 1 cut(s) 363
HhaI GCGC 3 cut(s) 199, 1318, 1394
Hin1I GRCGYC 1 cut(s) 1392
Hin6I GCGC 3 cut(s) 197, 1316, 1392
HinP1I GCGC 3 cut(s) 197, 1316, 1392
HinfI GANTC 4 cut(s) 336, 436, 776, 1121
HpaII CCGG 1 cut(s) 363
HphI GGTGA 5 cut(s) 110, 119, 406, 445, 478
Hpy166II GTNNAC 2 cut(s) 1033, 1112
Hpy188I TCNGA 3 cut(s) 1146, 1205, 1219
Hpy188III TCNNGA 2 cut(s) 83, 1171
Hpy8I GTNNAC 2 cut(s) 1033, 1112
HpyAV CCTTC 2 cut(s) 668, 1482
HpyCH4III ACNGT 3 cut(s) 433, 527, 1268
HpyCH4IV ACGT 1 cut(s) 669
HpyF10VI GCNNNNNNNGC 8 cut(s) 288, 297, 300, 306, 642, 1304, 1313, 1391
HpyF3I CTNAG 2 cut(s) 582, 1386
HpySE526I ACGT 1 cut(s) 669
Hsp92I GRCGYC 1 cut(s) 1392
HspAI GCGC 3 cut(s) 197, 1316, 1392
KasI GGCGCC 1 cut(s) 1391
Ksp22I TGATCA 2 cut(s) 274, 901
Kzo9I GATC 7 cut(s) 79, 274, 544, 598, 901, 1044, 1214
LguI GCTCTTC 2 cut(s) 556, 1322
LmnI GCTCC 3 cut(s) 208, 1304, 1474
Lsp1109I GCAGC 5 cut(s) 303, 306, 309, 312, 872
LweI GCATC 2 cut(s) 461, 728
MabI ACCWGGT 1 cut(s) 390
MaeI CTAG 1 cut(s) 1486
MaeII ACGT 1 cut(s) 669
MaeIII GTNAC 6 cut(s) 98, 343, 452, 568, 922, 1001
MalI GATC 7 cut(s) 81, 276, 546, 600, 903, 1046, 1216
MboI GATC 7 cut(s) 79, 274, 544, 598, 901, 1044, 1214
MflI RGATCY 1 cut(s) 1044
MhlI GDGCHC 2 cut(s) 914, 1114
MluCI AATT 7 cut(s) 404, 425, 762, 1371, 1413, 1436, 1441
Mly113I GGCGCC 1 cut(s) 1392
MlyI GAGTC 1 cut(s) 330
MmeI TCCRAC 2 cut(s) 209, 1033
MseI TTAA 3 cut(s) 612, 641, 1067
MspA1I CMGCKG 1 cut(s) 991
MspI CCGG 1 cut(s) 363
MspR9I CCNGG 3 cut(s) 206, 392, 1353
Mva1269I GAATGC 1 cut(s) 364
MvaI CCWGG 3 cut(s) 206, 392, 1353
MwoI GCNNNNNNNGC 8 cut(s) 288, 297, 300, 306, 642, 1304, 1313, 1391
NarI GGCGCC 1 cut(s) 1392
NcoI CCATGG 2 cut(s) 55, 160
NdeI CATATG 1 cut(s) 1085
NdeII GATC 7 cut(s) 79, 274, 544, 598, 901, 1044, 1214
NlaIV GGNNCC 6 cut(s) 694, 703, 796, 1091, 1275, 1393
NmuCI GTSAC 4 cut(s) 98, 343, 452, 922
NspI RCATGY 2 cut(s) 152, 576
PagI TCATGA 2 cut(s) 82, 1170
PaqCI CACCTGC 2 cut(s) 424, 1289
PceI AGGCCT 1 cut(s) 282
PciI ACATGT 1 cut(s) 572
PciSI GCTCTTC 2 cut(s) 556, 1322
PctI GAATGC 1 cut(s) 364
PfeI GAWTC 3 cut(s) 436, 776, 1121
PflMI CCANNNNNTGG 1 cut(s) 1100
PfoI TCCNGGA 1 cut(s) 204
PkrI GCNGC 5 cut(s) 293, 296, 299, 302, 862
PleI GAGTC 1 cut(s) 330
PluTI GGCGCC 1 cut(s) 1395
PpsI GAGTC 1 cut(s) 330
Ppu21I YACGTR 1 cut(s) 670
PscI ACATGT 1 cut(s) 572
Psp6I CCWGG 3 cut(s) 204, 390, 1351
PspEI GGTNACC 1 cut(s) 1001
PspFI CCCAGC 1 cut(s) 189
PspGI CCWGG 3 cut(s) 204, 390, 1351
PspN4I GGNNCC 6 cut(s) 694, 703, 796, 1091, 1275, 1393
PspPI GGNCC 2 cut(s) 247, 1273
PstNI CAGNNNCTG 1 cut(s) 391
PsuI RGATCY 1 cut(s) 1044
PvuII CAGCTG 1 cut(s) 991
RsaI GTAC 4 cut(s) 140, 389, 445, 842
RsaNI GTAC 4 cut(s) 139, 388, 444, 841
SapI GCTCTTC 2 cut(s) 556, 1322
SaqAI TTAA 3 cut(s) 612, 641, 1067
SatI GCNGC 5 cut(s) 292, 295, 298, 301, 861
Sau3AI GATC 7 cut(s) 79, 274, 544, 598, 901, 1044, 1214
Sau96I GGNCC 2 cut(s) 247, 1273
ScaI AGTACT 1 cut(s) 842
SchI GAGTC 1 cut(s) 330
ScrFI CCNGG 3 cut(s) 206, 392, 1353
SduI GDGCHC 2 cut(s) 914, 1114
SexAI ACCWGGT 1 cut(s) 390
SfaNI GCATC 2 cut(s) 461, 728
SfcI CTRYAG 1 cut(s) 1037
SfoI GGCGCC 1 cut(s) 1393
SinI GGWCC 1 cut(s) 1273
Sse9I AATT 7 cut(s) 404, 425, 762, 1371, 1413, 1436, 1441
SseBI AGGCCT 1 cut(s) 282
SsiI CCGC 5 cut(s) 217, 474, 486, 798, 1450
SspDI GGCGCC 1 cut(s) 1391
SspMI CTAG 1 cut(s) 1486
StuI AGGCCT 1 cut(s) 282
StyD4I CCNGG 3 cut(s) 204, 390, 1351
StyI CCWWGG 3 cut(s) 55, 160, 1458
TaaI ACNGT 3 cut(s) 433, 527, 1268
TaiI ACGT 1 cut(s) 672
TaqI TCGA 1 cut(s) 1245
TasI AATT 7 cut(s) 404, 425, 762, 1371, 1413, 1436, 1441
TatI WGTACW 2 cut(s) 443, 840
TfiI GAWTC 3 cut(s) 436, 776, 1121
Tru1I TTAA 3 cut(s) 612, 641, 1067
Tru9I TTAA 3 cut(s) 612, 641, 1067
TscAI CASTG 2 cut(s) 457, 1329
TseFI GTSAC 4 cut(s) 98, 343, 452, 922
TseI GCWGC 5 cut(s) 291, 294, 297, 300, 860
Tsp45I GTSAC 4 cut(s) 98, 343, 452, 922
TspDTI ATGAA 6 cut(s) 17, 22, 371, 764, 1280, 1373
TspGWI ACGGA 4 cut(s) 331, 556, 788, 1039
TspRI CASTG 2 cut(s) 457, 1329
Van91I CCANNNNNTGG 1 cut(s) 1100
VneI GTGCAC 1 cut(s) 1110
VpaK11BI GGWCC 1 cut(s) 1273
XapI RAATTY 3 cut(s) 425, 1371, 1436
XceI RCATGY 2 cut(s) 152, 576
XcmI CCANNNNNNNNNTGG 2 cut(s) 167, 1083
XspI CTAG 1 cut(s) 1486
ZrmI AGTACT 1 cut(s) 842
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.