Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0005873

Physical Location & Seq

Genomic Coordinates Reverse (-)

4465939 .. 4468260

Gene Structure 2322 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000000724

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGCCAGAAACTCGAGCACGGCGTCCTCGTCCTCACTCCAGAAGTACTTGTACAAAACGACTACATTGGGGCAGCCGTGGAGCGTCTGGAGCGCCTCGATTTTGGTGAAAGGTCGACTGGTAGTCGTGGACCTCCTTAAGAGCGACGTTGAGGTTGTCGACGAGACGGCGAGTGCGGTAGATGTCGGAGTAGGCGCCGGATCCAACCCACTCGAGGATATGTTTCTGACTTTCATTCGAGTCATTTCATTTCGACAATCAATGATGAAGGGGAGGATGTCAACTAGTTCAACAACATTCCTCTTCATCATTTTCTTGCTTTCTGCCACTCGTCATGGACTTTTGCACGTTTGTGCAAATGGTGATCATACCACCATGCGGTTGCCGCTAATTCACAAGTACTCTCCCCATTTCAATGGAGGAGTTGGTTTGATCAATAAAACCGATATAGATATCATGAAAGAGCTTCACCTCCATGACATAATCCGCCACCAAACGATTTTCCAAATGAATAGAGATGATCATCAAATCCCAAGGCGACAGGACTCAGAAAACAACTCATCCTTTGCAATGCCAGTGCATTCGGGTTTTGATATGCTGTCGGGGTTGTATTGGGTCGAAGTAAAAATTGGAACACCTCCCAGGACTTTCTTGTTGGCTGCAGATACAGCGAGTGACTTGACATGGGTCAAATGCAAGTACGATAGAACGTTGACAAAGGAGGCCAAACAGAAAATGATAGACGATCGCAAGAAGAAGAAACACCATCATGGCGATCTCAAAAAGTCATTAATTTTTCTCAATAAAGGTAGGGAATTTCGTGCTGATCTGTCATCGACATTCAAACCTGTTCCATGCTCCGATGGTATGTGCAGCCAAGGGCTCGCACACATGATGTCTTATAAAGACTGCCCAACCCCAACGTCGCCTTGCAGATACACTTACAGGTACATGGGAGGGGAGGGAGCAGAAGGTTTCTTTGGGTATGACACTATAACAGTACCCCTCGCAAATGGTAGCAAAACAAAGCTGCCTAATGTGACAATCGGCTGCACAGATTCCTCCCAAAAGTTAAAGGAAGGTGATGGCATTCTAGGTTTAGGCTTCGGTGACTACTCATTCTCCGAGACAGTAGTTTCTTATAAGTTTGCTGGCAAGTTCTCTTACTGCCTAATGTTTCATAGGAGCAACTCGAGTGTGTTGAGTTATCTTACATTTGGTCCCAATAAACAAACTGTTAACAGCCCTATGAGGTACACAAAGTTGATTATGAGGAAGCAGAAAGAAGATAACTCTAATTTATATGGCGTAAACATAACGGGCATCTCAATCGGGGGCACATTATTGAAGATACCAAGTCAATTTTGGGATGAAACGTCGCTTAATGGTGGTGTAGTGCTTGATTCAGGCTCAACCAACACATTTCTACCCCTACCAGCTTACAAGGCTGTCATGGACGAATTGACAGATGCTTTGTCAAAATATAATAATTTCGTGCTCAAAGATCTCCCATTTGAATTCTGCTTCAATGATAAAGGATATGACGAGTCTTCGGTGCCAAGACTTGCATTTCATTTTGCAGATGGTGTTCGATATGAGCCACCGGTGAGAAACTATGTTGTACCTGTGACAACGGGGACCAAGTGTATTGGCTTTGTTCCATCTTCCGATGGCAAGTCTGTTATTGGCAACCAAATGCAGCAAAACCATCTTTGGGAATATGATATTTCACGTGGTACTGTGGGTTTTGCTCCTTCCAGCTGCACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0006508 GO:0006807 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009507 GO:0009536 GO:0009743 GO:0009744 GO:0009888 GO:0009987 GO:0010019 GO:0010033 GO:0010073 GO:0010074 GO:0010492 GO:0016787 GO:0019538 GO:0019827 GO:0023052 GO:0030163 GO:0032501 GO:0032502 GO:0034285 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0048507 GO:0048511 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070001 GO:0070011 GO:0071704 GO:0098727 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04138 map04138

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

590

Amino Acids

65.57

Weight (kDa)

8.81

Isoelectric Point (pI)

33.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	204 - 407	4.4e-37	Xylanase inhibitor N-terminal
Asp	PF00026	204 - 585	5.2e-16	Eukaryotic aspartyl protease
TAXi_C	PF14541	435 - 584	1.9e-31	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005873)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12700 AT3G12700 AT3G12700
fragaria_vesca	FvH4_3g13820 FvH4_5g37920
malus_domestica	MD05G1240800.v1.1 MD10G1219200.v1.1
prunus_persica	Prupe.4G124800_v2.0.a1
pyrus_communis	pycom05g21700 pycom10g18470
rosa_chinensis	RchiOBHm_Chr5g0023001 RchiOBHm_Chr7g0239861
rosa_laevigata	RLG00000000724 RLG00000032688
rosa_roxburghii	Rroxscaffold_1G00056340 Rroxscaffold_3G00220750
rosa_rugosa	Rorug05G0076400 Rorug07G0330600
rosa_samantha	Rh5AG162600 Rh5BG161800 Rh5CG176500 Rh5DG163200 Rh7AG484100 Rh7BG457200 Rh7CG501600 Rh7DG469800
rosa_wichuraiana	Rw5G014650 Rw7G040610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	903, 1143
AccB1I	GGYRCC	2 cut(s)	194, 1555
AccI	GTMKAC	2 cut(s)	115, 159
AciI	CCGC	4 cut(s)	176, 379, 386, 487
AclI	AACGTT	1 cut(s)	710
AclWI	GGATC	2 cut(s)	195, 208
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	815, 1517
AcvI	CACGTG	1 cut(s)	1733
AcyI	GRCGYC	2 cut(s)	23, 195
AfaI	GTAC	9 cut(s)	47, 53, 401, 701, 950, 1002, 1256, 1623, 1738
AfiI	CCNNNNNNNGG	3 cut(s)	214, 378, 1714
AflII	CTTAAG	1 cut(s)	137
AgeI	ACCGGT	1 cut(s)	1603
AgsI	TTSAA	6 cut(s)	291, 415, 844, 1348, 1517, 1528
AhdI	GACNNNNNGTC	1 cut(s)	122
AhlI	ACTAGT	1 cut(s)	284
AjnI	CCWGG	1 cut(s)	641
AjuI	GAANNNNNNNTTGG	4 cut(s)	612, 644, 963, 995
AleI	CACNNNNGTG	1 cut(s)	351
AluBI	AGCT	4 cut(s)	466, 1030, 1439, 1761
AluI	AGCT	4 cut(s)	466, 1030, 1439, 1761
Alw21I	GWGCWC	2 cut(s)	20, 1500
Alw26I	GTCTC	2 cut(s)	158, 1121
AlwI	GGATC	2 cut(s)	195, 208
Ama87I	CYCGRG	3 cut(s)	13, 212, 1192
AoxI	GGCC	2 cut(s)	3, 723
ApeKI	GCWGC	7 cut(s)	73, 659, 873, 1030, 1050, 1699, 1761
ApoI	RAATTY	2 cut(s)	815, 1517
ArsI	GACNNNNNNTTYG	2 cut(s)	1456, 1488
AseI	ATTAAT	1 cut(s)	791
AsiGI	ACCGGT	1 cut(s)	1603
AspLEI	GCGC	2 cut(s)	95, 197
AspS9I	GGNCC	3 cut(s)	130, 1220, 1638
AsuHPI	GGTGA	6 cut(s)	118, 374, 461, 1094, 1121, 1618
AvaI	CYCGRG	3 cut(s)	13, 212, 1192
AvaII	GGWCC	3 cut(s)	130, 1220, 1638
BaeGI	GKGCMC	1 cut(s)	1340
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	200
BanI	GGYRCC	2 cut(s)	194, 1555
BanII	GRGCYC	1 cut(s)	885
BarI	GAAGNNNNNNTAC	2 cut(s)	35, 67
BbrPI	CACGTG	1 cut(s)	1733
BbsI	GAAGAC	1 cut(s)	1542
Bbv12I	GWGCWC	2 cut(s)	20, 1500
BbvI	GCAGC	7 cut(s)	85, 646, 885, 1017, 1037, 1711, 1748
BccI	CCATC	7 cut(s)	774, 857, 1079, 1577, 1664, 1669, 1716
BceAI	ACGGC	3 cut(s)	36, 61, 183
BcgI	CGANNNNNNTGC	2 cut(s)	1312, 1346
BciT130I	CCWGG	1 cut(s)	643
BclI	TGATCA	3 cut(s)	364, 432, 520
BcoDI	GTCTC	2 cut(s)	158, 1121
BcuI	ACTAGT	1 cut(s)	284
BfaI	CTAG	3 cut(s)	285, 1094, 1768
BfmI	CTRYAG	1 cut(s)	660
BfoI	RGCGCY	2 cut(s)	96, 198
BfrI	CTTAAG	1 cut(s)	137
BglII	AGATCT	1 cut(s)	1504
BisI	GCNGC	8 cut(s)	74, 386, 660, 874, 1031, 1051, 1700, 1762
BlsI	GCNGC	8 cut(s)	75, 387, 661, 875, 1032, 1052, 1701, 1763
BmcAI	AGTACT	2 cut(s)	47, 401
Bme1390I	CCNGG	1 cut(s)	643
Bme18I	GGWCC	3 cut(s)	130, 1220, 1638
BmeRI	GACNNNNNGTC	1 cut(s)	122
BmeT110I	CYCGRG	3 cut(s)	13, 212, 1192
BmgT120I	GGNCC	3 cut(s)	130, 1220, 1638
BmiI	GGNNCC	5 cut(s)	196, 202, 1222, 1557, 1639
BmrFI	CCNGG	1 cut(s)	643
BmsI	GCATC	2 cut(s)	1332, 1459
BoxI	GACNNNNGTC	1 cut(s)	686
BpiI	GAAGAC	1 cut(s)	1542
BpmI	CTGGAG	2 cut(s)	23, 109
BsaAI	YACGTR	1 cut(s)	1733
BsaBI	GATNNNNATC	1 cut(s)	522
BsaHI	GRCGYC	2 cut(s)	23, 195
BsaJI	CCNNGG	4 cut(s)	77, 533, 641, 877
BsaWI	WCCGGW	1 cut(s)	1603
BsaXI	ACNNNNNCTCC	2 cut(s)	1106, 1136
Bsc4I	CCNNNNNNNGG	3 cut(s)	214, 378, 1714
Bse118I	RCCGGY	1 cut(s)	1603
Bse1I	ACTGG	2 cut(s)	123, 575
Bse3DI	GCAATG	1 cut(s)	576
Bse8I	GATNNNNATC	1 cut(s)	522
BseBI	CCWGG	1 cut(s)	643
BseDI	CCNNGG	4 cut(s)	77, 533, 641, 877
BseGI	GGATG	3 cut(s)	282, 560, 1375
BseJI	GATNNNNATC	1 cut(s)	522
BseLI	CCNNNNNNNGG	3 cut(s)	214, 378, 1714
BseMI	GCAATG	1 cut(s)	576
BseMII	CTCAG	1 cut(s)	561
BseNI	ACTGG	2 cut(s)	123, 575
BseRI	GAGGAG	1 cut(s)	435
BseSI	GKGCMC	1 cut(s)	1340
BseXI	GCAGC	7 cut(s)	85, 646, 885, 1017, 1037, 1711, 1748
BsgI	GTGCAG	3 cut(s)	892, 1036, 1747
Bsh1285I	CGRYCG	1 cut(s)	748
BshFI	GGCC	2 cut(s)	5, 725
BshNI	GGYRCC	2 cut(s)	194, 1555
BshTI	ACCGGT	1 cut(s)	1603
BsiEI	CGRYCG	1 cut(s)	748
BsiHKAI	GWGCWC	2 cut(s)	20, 1500
BsiHKCI	CYCGRG	3 cut(s)	13, 212, 1192
BsiSI	CCGG	2 cut(s)	198, 1604
BslFI	GGGAC	2 cut(s)	1206, 1651
BslI	CCNNNNNNNGG	3 cut(s)	214, 378, 1714
BsmAI	GTCTC	2 cut(s)	158, 1121
BsmBI	CGTCTC	1 cut(s)	158
BsmFI	GGGAC	2 cut(s)	1206, 1651
BsmI	GAATGC	2 cut(s)	580, 1089
BsnI	GGCC	2 cut(s)	5, 725
BsoBI	CYCGRG	3 cut(s)	13, 212, 1192
Bsp1286I	GDGCHC	4 cut(s)	20, 885, 1340, 1500
Bsp1407I	TGTACA	1 cut(s)	51
Bsp143I	GATC	8 cut(s)	200, 364, 432, 520, 745, 775, 826, 1504
BspACI	CCGC	4 cut(s)	176, 379, 386, 487
BspANI	GGCC	2 cut(s)	5, 725
BspCNI	CTCAG	1 cut(s)	560
BspHI	TCATGA	1 cut(s)	456
BspLI	GGNNCC	5 cut(s)	196, 202, 1222, 1557, 1639
BspMAI	CTGCAG	1 cut(s)	664
BspPI	GGATC	2 cut(s)	195, 208
BspT107I	GGYRCC	2 cut(s)	194, 1555
BspTI	CTTAAG	1 cut(s)	137
BsrDI	GCAATG	1 cut(s)	576
BsrFI	RCCGGY	1 cut(s)	1603
BsrGI	TGTACA	1 cut(s)	51
BsrI	ACTGG	2 cut(s)	123, 575
BssAI	RCCGGY	1 cut(s)	1603
BssECI	CCNNGG	4 cut(s)	77, 533, 641, 877
BssMI	GATC	8 cut(s)	200, 364, 432, 520, 745, 775, 826, 1504
BssNI	GRCGYC	2 cut(s)	23, 195
BssT1I	CCWWGG	2 cut(s)	533, 877
Bst2UI	CCWGG	1 cut(s)	643
Bst4CI	ACNGT	4 cut(s)	1000, 1132, 1237, 1741
Bst6I	CTCTTC	1 cut(s)	308
BstACI	GRCGYC	2 cut(s)	23, 195
BstAFI	CTTAAG	1 cut(s)	137
BstAUI	TGTACA	1 cut(s)	51
BstBAI	YACGTR	1 cut(s)	1733
BstC8I	GCNNGC	2 cut(s)	885, 1153
BstDEI	CTNAG	1 cut(s)	547
BstDSI	CCRYGG	1 cut(s)	77
BstF5I	GGATG	3 cut(s)	282, 560, 1375
BstH2I	RGCGCY	2 cut(s)	96, 198
BstHHI	GCGC	2 cut(s)	95, 197
BstKTI	GATC	8 cut(s)	203, 367, 435, 523, 748, 778, 829, 1507
BstMAI	GTCTC	2 cut(s)	158, 1121
BstMBI	GATC	8 cut(s)	200, 364, 432, 520, 745, 775, 826, 1504
BstMCI	CGRYCG	1 cut(s)	748
BstMWI	GCNNNNNNNGC	4 cut(s)	90, 385, 668, 1445
BstNI	CCWGG	1 cut(s)	643
BstPAI	GACNNNNGTC	1 cut(s)	686
BstSCI	CCNGG	1 cut(s)	641
BstSFI	CTRYAG	1 cut(s)	660
BstSLI	GKGCMC	1 cut(s)	1340
BstV1I	GCAGC	7 cut(s)	85, 646, 885, 1017, 1037, 1711, 1748
BstV2I	GAAGAC	1 cut(s)	1542
BstX2I	RGATCY	2 cut(s)	200, 1504
BstXI	CCANNNNNNTGG	1 cut(s)	416
BstYI	RGATCY	2 cut(s)	200, 1504
BsuRI	GGCC	2 cut(s)	5, 725
BtgI	CCRYGG	1 cut(s)	77
BtsCI	GGATG	3 cut(s)	282, 560, 1375
BtsIMutI	CAGTG	1 cut(s)	582
Cac8I	GCNNGC	2 cut(s)	885, 1153
CciI	TCATGA	1 cut(s)	456
CfoI	GCGC	2 cut(s)	95, 197
Cfr10I	RCCGGY	1 cut(s)	1603
Cfr13I	GGNCC	3 cut(s)	130, 1220, 1638
CseI	GACGC	2 cut(s)	12, 73
Csp6I	GTAC	9 cut(s)	46, 52, 400, 700, 949, 1001, 1255, 1622, 1737
CspAI	ACCGGT	1 cut(s)	1603
CviQI	GTAC	9 cut(s)	46, 52, 400, 700, 949, 1001, 1255, 1622, 1737
DdeI	CTNAG	1 cut(s)	547
DinI	GGCGCC	1 cut(s)	196
DpnI	GATC	8 cut(s)	202, 366, 434, 522, 747, 777, 828, 1506
DpnII	GATC	8 cut(s)	200, 364, 432, 520, 745, 775, 826, 1504
DriI	GACNNNNNGTC	1 cut(s)	122
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	308
Eam1105I	GACNNNNNGTC	1 cut(s)	122
EarI	CTCTTC	1 cut(s)	308
EciI	GGCGGA	1 cut(s)	476
Eco130I	CCWWGG	2 cut(s)	533, 877
Eco24I	GRGCYC	1 cut(s)	885
Eco32I	GATATC	1 cut(s)	454
Eco47I	GGWCC	3 cut(s)	130, 1220, 1638
Eco72I	CACGTG	1 cut(s)	1733
Eco88I	CYCGRG	3 cut(s)	13, 212, 1192
EcoRI	GAATTC	1 cut(s)	1517
EcoRII	CCWGG	1 cut(s)	641
EcoRV	GATATC	1 cut(s)	454
EcoT14I	CCWWGG	2 cut(s)	533, 877
EcoT38I	GRGCYC	1 cut(s)	885
EgeI	GGCGCC	1 cut(s)	196
EheI	GGCGCC	1 cut(s)	196
ErhI	CCWWGG	2 cut(s)	533, 877
Esp3I	CGTCTC	1 cut(s)	158
FaqI	GGGAC	2 cut(s)	1206, 1651
FbaI	TGATCA	3 cut(s)	364, 432, 520
FblI	GTMKAC	2 cut(s)	115, 159
Fnu4HI	GCNGC	8 cut(s)	74, 386, 660, 874, 1031, 1051, 1700, 1762
FokI	GGATG	3 cut(s)	289, 547, 1382
FriOI	GRGCYC	1 cut(s)	885
Fsp4HI	GCNGC	8 cut(s)	74, 386, 660, 874, 1031, 1051, 1700, 1762
FspBI	CTAG	3 cut(s)	285, 1094, 1768
GlaI	GCGC	2 cut(s)	94, 196
GluI	GCNGC	8 cut(s)	74, 386, 660, 874, 1031, 1051, 1700, 1762
GsuI	CTGGAG	2 cut(s)	23, 109
HaeII	RGCGCY	2 cut(s)	96, 198
HaeIII	GGCC	2 cut(s)	5, 725
HapII	CCGG	2 cut(s)	198, 1604
HgaI	GACGC	2 cut(s)	12, 73
HhaI	GCGC	2 cut(s)	95, 197
Hin1I	GRCGYC	2 cut(s)	23, 195
Hin6I	GCGC	2 cut(s)	93, 195
HinP1I	GCGC	2 cut(s)	93, 195
HincII	GTYRAC	5 cut(s)	116, 160, 282, 714, 1240
HindII	GTYRAC	5 cut(s)	116, 160, 282, 714, 1240
HinfI	GANTC	5 cut(s)	240, 545, 1058, 1403, 1547
HpaI	GTTAAC	1 cut(s)	1240
HpaII	CCGG	2 cut(s)	198, 1604
HphI	GGTGA	6 cut(s)	118, 374, 461, 1094, 1121, 1618
Hpy166II	GTNNAC	8 cut(s)	116, 130, 160, 282, 714, 1240, 1257, 1312
Hpy188I	TCNGA	6 cut(s)	188, 228, 550, 862, 1126, 1669
Hpy188III	TCNNGA	3 cut(s)	40, 88, 457
Hpy8I	GTNNAC	8 cut(s)	116, 130, 160, 282, 714, 1240, 1257, 1312
Hpy99I	CGWCG	4 cut(s)	149, 164, 928, 1381
HpyAV	CCTTC	4 cut(s)	262, 965, 1073, 1764
HpyCH4III	ACNGT	4 cut(s)	1000, 1132, 1237, 1741
HpyCH4IV	ACGT	6 cut(s)	147, 348, 710, 923, 1376, 1732
HpyF10VI	GCNNNNNNNGC	4 cut(s)	90, 385, 668, 1445
HpyF3I	CTNAG	1 cut(s)	547
HpySE526I	ACGT	6 cut(s)	147, 348, 710, 923, 1376, 1732
Hsp92I	GRCGYC	2 cut(s)	23, 195
HspAI	GCGC	2 cut(s)	93, 195
KasI	GGCGCC	1 cut(s)	194
Ksp22I	TGATCA	3 cut(s)	364, 432, 520
KspAI	GTTAAC	1 cut(s)	1240
Kzo9I	GATC	8 cut(s)	200, 364, 432, 520, 745, 775, 826, 1504
LmnI	GCTCC	6 cut(s)	81, 90, 863, 965, 1185, 1756
Lsp1109I	GCAGC	7 cut(s)	85, 646, 885, 1017, 1037, 1711, 1748
LweI	GCATC	2 cut(s)	1332, 1459
MaeI	CTAG	3 cut(s)	285, 1094, 1768
MaeII	ACGT	6 cut(s)	147, 348, 710, 923, 1376, 1732
MaeIII	GTNAC	4 cut(s)	674, 1039, 1109, 1627
MalI	GATC	8 cut(s)	202, 366, 434, 522, 747, 777, 828, 1506
MboI	GATC	8 cut(s)	200, 364, 432, 520, 745, 775, 826, 1504
MboII	GAAGA	7 cut(s)	295, 766, 769, 1298, 1360, 1542, 1656
MflI	RGATCY	2 cut(s)	200, 1504
MhlI	GDGCHC	4 cut(s)	20, 885, 1340, 1500
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	9 cut(s)	390, 627, 792, 815, 1297, 1361, 1460, 1489, 1517
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	1 cut(s)	195
MlyI	GAGTC	3 cut(s)	249, 539, 1556
MmeI	TCCRAC	2 cut(s)	166, 228
Mox20I	TGGCCA	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	5 cut(s)	138, 791, 1073, 1239, 1383
MslI	CAYNNNNRTG	4 cut(s)	351, 414, 474, 768
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	1761
MspCI	CTTAAG	1 cut(s)	137
MspI	CCGG	2 cut(s)	198, 1604
MspR9I	CCNGG	1 cut(s)	643
Mva1269I	GAATGC	2 cut(s)	580, 1089
MvaI	CCWGG	1 cut(s)	643
MwoI	GCNNNNNNNGC	4 cut(s)	90, 385, 668, 1445
NarI	GGCGCC	1 cut(s)	195
NdeII	GATC	8 cut(s)	200, 364, 432, 520, 745, 775, 826, 1504
NlaIV	GGNNCC	5 cut(s)	196, 202, 1222, 1557, 1639
NmuCI	GTSAC	4 cut(s)	674, 1039, 1109, 1627
OliI	CACNNNNGTG	1 cut(s)	351
PaeR7I	CTCGAG	3 cut(s)	13, 212, 1192
PagI	TCATGA	1 cut(s)	456
PcsI	WCGNNNNNNNCGW	2 cut(s)	20, 26
PctI	GAATGC	2 cut(s)	580, 1089
PfeI	GAWTC	2 cut(s)	1058, 1403
PinAI	ACCGGT	1 cut(s)	1603
PkrI	GCNGC	8 cut(s)	75, 387, 661, 875, 1032, 1052, 1701, 1763
Ple19I	CGATCG	1 cut(s)	748
PleI	GAGTC	3 cut(s)	248, 539, 1555
PluTI	GGCGCC	1 cut(s)	198
PmaCI	CACGTG	1 cut(s)	1733
PmlI	CACGTG	1 cut(s)	1733
PpsI	GAGTC	3 cut(s)	248, 539, 1555
Ppu21I	YACGTR	1 cut(s)	1733
PshAI	GACNNNNGTC	1 cut(s)	686
PshBI	ATTAAT	1 cut(s)	791
PsiI	TTATAA	2 cut(s)	903, 1143
Psp1406I	AACGTT	1 cut(s)	710
Psp6I	CCWGG	1 cut(s)	641
PspCI	CACGTG	1 cut(s)	1733
PspGI	CCWGG	1 cut(s)	641
PspN4I	GGNNCC	5 cut(s)	196, 202, 1222, 1557, 1639
PspPI	GGNCC	3 cut(s)	130, 1220, 1638
PspXI	VCTCGAGB	3 cut(s)	13, 212, 1192
PstI	CTGCAG	1 cut(s)	664
PsuI	RGATCY	2 cut(s)	200, 1504
PvuI	CGATCG	1 cut(s)	748
PvuII	CAGCTG	1 cut(s)	1761
RsaI	GTAC	9 cut(s)	47, 53, 401, 701, 950, 1002, 1256, 1623, 1738
RsaNI	GTAC	9 cut(s)	46, 52, 400, 700, 949, 1001, 1255, 1622, 1737
RseI	CAYNNNNRTG	4 cut(s)	351, 414, 474, 768
SalI	GTCGAC	2 cut(s)	114, 158
SaqAI	TTAA	5 cut(s)	138, 791, 1073, 1239, 1383
SatI	GCNGC	8 cut(s)	74, 386, 660, 874, 1031, 1051, 1700, 1762
Sau3AI	GATC	8 cut(s)	200, 364, 432, 520, 745, 775, 826, 1504
Sau96I	GGNCC	3 cut(s)	130, 1220, 1638
ScaI	AGTACT	2 cut(s)	47, 401
SchI	GAGTC	3 cut(s)	249, 539, 1556
ScrFI	CCNGG	1 cut(s)	643
SduI	GDGCHC	4 cut(s)	20, 885, 1340, 1500
SfaNI	GCATC	2 cut(s)	1332, 1459
SfcI	CTRYAG	1 cut(s)	660
SfoI	GGCGCC	1 cut(s)	196
Sfr274I	CTCGAG	3 cut(s)	13, 212, 1192
SgrAI	CRCCGGYG	1 cut(s)	1603
SinI	GGWCC	3 cut(s)	130, 1220, 1638
SlaI	CTCGAG	3 cut(s)	13, 212, 1192
SmiMI	CAYNNNNRTG	4 cut(s)	351, 414, 474, 768
SmlI	CTYRAG	4 cut(s)	13, 137, 212, 1192
SmoI	CTYRAG	4 cut(s)	13, 137, 212, 1192
SpeI	ACTAGT	1 cut(s)	284
Sse9I	AATT	9 cut(s)	390, 627, 792, 815, 1297, 1361, 1460, 1489, 1517
SsiI	CCGC	4 cut(s)	176, 379, 386, 487
SspDI	GGCGCC	1 cut(s)	194
SspMI	CTAG	3 cut(s)	285, 1094, 1768
StyD4I	CCNGG	1 cut(s)	641
StyI	CCWWGG	2 cut(s)	533, 877
TaaI	ACNGT	4 cut(s)	1000, 1132, 1237, 1741
TaiI	ACGT	6 cut(s)	150, 351, 713, 926, 1379, 1735
TasI	AATT	9 cut(s)	390, 627, 792, 815, 1297, 1361, 1460, 1489, 1517
TatI	WGTACW	3 cut(s)	45, 51, 399
TauI	GCSGC	1 cut(s)	388
TfiI	GAWTC	2 cut(s)	1058, 1403
Tru1I	TTAA	5 cut(s)	138, 791, 1073, 1239, 1383
Tru9I	TTAA	5 cut(s)	138, 791, 1073, 1239, 1383
TscAI	CASTG	1 cut(s)	582
TseFI	GTSAC	4 cut(s)	674, 1039, 1109, 1627
TseI	GCWGC	7 cut(s)	73, 659, 873, 1030, 1050, 1699, 1761
Tsp45I	GTSAC	4 cut(s)	674, 1039, 1109, 1627
TspDTI	ATGAA	9 cut(s)	223, 237, 281, 295, 473, 524, 1169, 1386, 1562
TspRI	CASTG	1 cut(s)	582
Vha464I	CTTAAG	1 cut(s)	137
VpaK11BI	GGWCC	3 cut(s)	130, 1220, 1638
VspI	ATTAAT	1 cut(s)	791
XapI	RAATTY	2 cut(s)	815, 1517
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1362
XhoI	CTCGAG	3 cut(s)	13, 212, 1192
XmiI	GTMKAC	2 cut(s)	115, 159
XspI	CTAG	3 cut(s)	285, 1094, 1768
ZrmI	AGTACT	2 cut(s)	47, 401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.