Rh7DG469800

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
67118044 .. 67120373
2330 bp
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UTR
Exon/CDS
Intron
Rh7DG469800.1

Sequence Viewer

Length: 1509 bp
ATGATGAAGGGGAGGATGTCAACTAGTTCAACAACATTCCTCTTCATCATTTTCTTGCTTTCTGCCACTCATCATGGACTTTTGCATGTTTGTGCAAATGGTGATCATACCACCATGAGGTTGCCGCTAATTCATAAGTACTCTCCTCATTTCAACGGAGGAGTTGGTTTGATCAATAAAACCGATATAGATGTCATGAAAGAGCTTCACCTCCATGACATAATCCGCCACCAAACGATTTTCCAAATGAATAGAGATGATCATCAAATCCCAAGGCGACAGGACTCAGAAACTAACTCATCCTTTGCAATGCCGGTGCATTCGGGTTTTGATATGCTGTCGGGGTTGTATTGGGTCGAAGTAAAAATTGGAACACCTCCCAAGACTTTCTTGTTGGCTGCAGATACAGCGAGTGACTTGACATGGGTCAAATGCAAATACGATATAACGTTGACAAAGGAGGCCAAACAGAAAATGATAGACGATCGCAAGAAGAAGAAACACCATCATGGCGATCTCAAAAAGTCATTAATTTTTCTCAATAAAGGTAGGGAATTTCGTGCTGATCTGTCATCGACATTCAAACCTGTTCCATGCTCCGATGGTATGTGCCGCCAAGGGCTCGCACACATGATGTCTTATAAAAACTGCCCAACCCCAACGTCGCCTTGCAGATACACTTACAGGTACATGGGAGGGGAGGGAGCAGATGGTTTCTTTGGGCATGACACTGTAACAGTACCCCTCGCAAATGGTAGCAAAACAAAGCTGCCTAATGTGACAATTGGCTGCACAGATTCCTCCCAAAAGTTAAAGCAAGGTGATGGCATTCTAGGTTTAGGCTTCGGTTACTACTCATTCTCCGAGACAGTAGTTTCCTCTAAGTTTGCTGGCAAGTTCTCTTACTGCCTAATGTTTCATAGGAGCAACTCGAGTGTGTTGAGTTATCTTACATTTGGTCCCAATAAACAAACTGCTAACAGCCCTATGAGGTACACAAAGTTGATTATGAGGAAGCAGCACGGAGGTAACTCTAATTTATATGGCGTAAACATAACGGGCATCTCAATCGGGGGCACATTATTGAAGATACCAAGTCAATTTTGGGATGCAACGTCGCGTGATGGTGGTGTAGTGCTTGATTCAGGCTCAACCAACACATTTCTACCCCTACCAGCTTACAAGGCTGTCATGGACGAATTGACAGATGCTTTGTCAAAATATAATAATTTCGTGATCAAAGAGCTCCCATTTGAATTCTGCTTCAATGATAAAGGATATGACGAGTCTTCGGTGCCAAGACTTGCATTTCATTTTGCAGATGGTGTTCGATATGAGCCACCGGTGAGAAACTATGTTGTACCTGTGACAACGGGGACCAAGTGTATTGGCTTTGTTCCATCTCCCGATGGCAAGCCTGTTATTGGCAACCAAATGCAGCAAAACCATCTTTGGGAATTTGATATTTCACGTGGTATTGTGGGTTTTGCTCCTTCCAGCTGCACCTAG

Protein Analysis

502

Amino Acids

55.91

Weight (kDa)

9.09

Isoelectric Point (pI)

34.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 117 - 320 1.1e-36 Xylanase inhibitor N-terminal
Asp PF00026 117 - 498 2.2e-15 Eukaryotic aspartyl protease
TAXi_C PF14541 348 - 497 1.3e-31 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 642
AccB1I GGYRCC 1 cut(s) 1294
AccII CGCG 1 cut(s) 1120
AciI CCGC 3 cut(s) 125, 226, 613
AclI AACGTT 1 cut(s) 449
AcsI RAATTY 3 cut(s) 554, 1256, 1457
AcvI CACGTG 1 cut(s) 1472
AfaI GTAC 5 cut(s) 140, 689, 741, 995, 1362
AfiI CCNNNNNNNGG 3 cut(s) 117, 1424, 1453
AgeI ACCGGT 1 cut(s) 1342
AgsI TTSAA 6 cut(s) 30, 154, 583, 1087, 1256, 1267
AhlI ACTAGT 1 cut(s) 23
AjuI GAANNNNNNNTTGG 2 cut(s) 351, 383
AluBI AGCT 5 cut(s) 205, 769, 1178, 1246, 1500
AluI AGCT 5 cut(s) 205, 769, 1178, 1246, 1500
Alw21I GWGCWC 1 cut(s) 1248
Alw26I GTCTC 1 cut(s) 860
Ama87I CYCGRG 1 cut(s) 931
AoxI GGCC 1 cut(s) 462
ApeKI GCWGC 6 cut(s) 398, 769, 789, 1018, 1438, 1500
ApoI RAATTY 3 cut(s) 554, 1256, 1457
ArsI GACNNNNNNTTYG 2 cut(s) 1195, 1227
AseI ATTAAT 1 cut(s) 530
AsiGI ACCGGT 1 cut(s) 1342
AspS9I GGNCC 2 cut(s) 959, 1377
AsuHPI GGTGA 4 cut(s) 113, 200, 833, 1357
AvaI CYCGRG 1 cut(s) 931
AvaII GGWCC 2 cut(s) 959, 1377
BaeGI GKGCMC 1 cut(s) 1079
BanI GGYRCC 1 cut(s) 1294
BanII GRGCYC 2 cut(s) 624, 1248
BbrPI CACGTG 1 cut(s) 1472
BbsI GAAGAC 1 cut(s) 1281
Bbv12I GWGCWC 1 cut(s) 1248
BbvI GCAGC 6 cut(s) 385, 756, 776, 1030, 1450, 1487
BccI CCATC 9 cut(s) 513, 596, 704, 818, 1118, 1316, 1403, 1408, 1455
BcgI CGANNNNNNTGC 2 cut(s) 1051, 1085
BclI TGATCA 4 cut(s) 103, 171, 259, 1236
BcoDI GTCTC 1 cut(s) 860
BcuI ACTAGT 1 cut(s) 23
BfaI CTAG 3 cut(s) 24, 833, 1507
BfmI CTRYAG 1 cut(s) 399
BisI GCNGC 8 cut(s) 125, 399, 613, 770, 790, 1019, 1439, 1501
BlsI GCNGC 8 cut(s) 126, 400, 614, 771, 791, 1020, 1440, 1502
BmcAI AGTACT 1 cut(s) 140
Bme18I GGWCC 2 cut(s) 959, 1377
BmeT110I CYCGRG 1 cut(s) 931
BmgT120I GGNCC 2 cut(s) 959, 1377
BmiI GGNNCC 3 cut(s) 961, 1296, 1378
BmsI GCATC 3 cut(s) 1071, 1099, 1198
BoxI GACNNNNGTC 1 cut(s) 425
BpiI GAAGAC 1 cut(s) 1281
BsaAI YACGTR 1 cut(s) 1472
BsaBI GATNNNNATC 1 cut(s) 261
BsaJI CCNNGG 2 cut(s) 272, 616
BsaWI WCCGGW 1 cut(s) 1342
BsaXI ACNNNNNCTCC 2 cut(s) 845, 875
Bsc4I CCNNNNNNNGG 3 cut(s) 117, 1424, 1453
Bse118I RCCGGY 2 cut(s) 313, 1342
Bse3DI GCAATG 1 cut(s) 315
Bse8I GATNNNNATC 1 cut(s) 261
BseDI CCNNGG 2 cut(s) 272, 616
BseGI GGATG 3 cut(s) 21, 299, 1114
BseJI GATNNNNATC 1 cut(s) 261
BseLI CCNNNNNNNGG 3 cut(s) 117, 1424, 1453
BseMI GCAATG 1 cut(s) 315
BseMII CTCAG 1 cut(s) 300
BseRI GAGGAG 2 cut(s) 135, 174
BseSI GKGCMC 1 cut(s) 1079
BseXI GCAGC 6 cut(s) 385, 756, 776, 1030, 1450, 1487
BsgI GTGCAG 2 cut(s) 775, 1486
Bsh1236I CGCG 1 cut(s) 1120
Bsh1285I CGRYCG 1 cut(s) 487
BshFI GGCC 1 cut(s) 464
BshNI GGYRCC 1 cut(s) 1294
BshTI ACCGGT 1 cut(s) 1342
BsiEI CGRYCG 1 cut(s) 487
BsiHKAI GWGCWC 1 cut(s) 1248
BsiHKCI CYCGRG 1 cut(s) 931
BsiSI CCGG 2 cut(s) 314, 1343
BslFI GGGAC 2 cut(s) 945, 1390
BslI CCNNNNNNNGG 3 cut(s) 117, 1424, 1453
BsmAI GTCTC 1 cut(s) 860
BsmFI GGGAC 2 cut(s) 945, 1390
BsmI GAATGC 2 cut(s) 319, 828
BsnI GGCC 1 cut(s) 464
BsoBI CYCGRG 1 cut(s) 931
Bsp1286I GDGCHC 3 cut(s) 624, 1079, 1248
Bsp143I GATC 7 cut(s) 103, 171, 259, 484, 514, 565, 1236
BspACI CCGC 3 cut(s) 125, 226, 613
BspANI GGCC 1 cut(s) 464
BspCNI CTCAG 1 cut(s) 299
BspFNI CGCG 1 cut(s) 1120
BspHI TCATGA 1 cut(s) 195
BspLI GGNNCC 3 cut(s) 961, 1296, 1378
BspMAI CTGCAG 1 cut(s) 403
BspT107I GGYRCC 1 cut(s) 1294
BsrDI GCAATG 1 cut(s) 315
BsrFI RCCGGY 2 cut(s) 313, 1342
BssAI RCCGGY 2 cut(s) 313, 1342
BssECI CCNNGG 2 cut(s) 272, 616
BssMI GATC 7 cut(s) 103, 171, 259, 484, 514, 565, 1236
BssT1I CCWWGG 2 cut(s) 272, 616
Bst4CI ACNGT 3 cut(s) 733, 739, 871
Bst6I CTCTTC 1 cut(s) 47
BstBAI YACGTR 1 cut(s) 1472
BstC8I GCNNGC 3 cut(s) 624, 892, 1415
BstDEI CTNAG 2 cut(s) 286, 882
BstF5I GGATG 3 cut(s) 21, 299, 1114
BstFNI CGCG 1 cut(s) 1120
BstKTI GATC 7 cut(s) 106, 174, 262, 487, 517, 568, 1239
BstMAI GTCTC 1 cut(s) 860
BstMBI GATC 7 cut(s) 103, 171, 259, 484, 514, 565, 1236
BstMCI CGRYCG 1 cut(s) 487
BstMWI GCNNNNNNNGC 2 cut(s) 407, 1184
BstNSI RCATGY 1 cut(s) 89
BstPAI GACNNNNGTC 1 cut(s) 425
BstSFI CTRYAG 1 cut(s) 399
BstSLI GKGCMC 1 cut(s) 1079
BstUI CGCG 1 cut(s) 1120
BstV1I GCAGC 6 cut(s) 385, 756, 776, 1030, 1450, 1487
BstV2I GAAGAC 1 cut(s) 1281
BsuRI GGCC 1 cut(s) 464
BtsCI GGATG 3 cut(s) 21, 299, 1114
BtsIMutI CAGTG 1 cut(s) 729
Cac8I GCNNGC 3 cut(s) 624, 892, 1415
CciI TCATGA 1 cut(s) 195
Cfr10I RCCGGY 2 cut(s) 313, 1342
Cfr13I GGNCC 2 cut(s) 959, 1377
Csp6I GTAC 5 cut(s) 139, 688, 740, 994, 1361
CspAI ACCGGT 1 cut(s) 1342
CviQI GTAC 5 cut(s) 139, 688, 740, 994, 1361
DdeI CTNAG 2 cut(s) 286, 882
DpnI GATC 7 cut(s) 105, 173, 261, 486, 516, 567, 1238
DpnII GATC 7 cut(s) 103, 171, 259, 484, 514, 565, 1236
Eam1104I CTCTTC 1 cut(s) 47
EarI CTCTTC 1 cut(s) 47
EciI GGCGGA 1 cut(s) 215
Ecl136II GAGCTC 1 cut(s) 1246
Eco130I CCWWGG 2 cut(s) 272, 616
Eco24I GRGCYC 2 cut(s) 624, 1248
Eco47I GGWCC 2 cut(s) 959, 1377
Eco53kI GAGCTC 1 cut(s) 1246
Eco72I CACGTG 1 cut(s) 1472
Eco88I CYCGRG 1 cut(s) 931
EcoICRI GAGCTC 1 cut(s) 1246
EcoRI GAATTC 1 cut(s) 1256
EcoT14I CCWWGG 2 cut(s) 272, 616
EcoT38I GRGCYC 2 cut(s) 624, 1248
ErhI CCWWGG 2 cut(s) 272, 616
FalI AAGNNNNNCTT 2 cut(s) 374, 406
FaqI GGGAC 2 cut(s) 945, 1390
FbaI TGATCA 4 cut(s) 103, 171, 259, 1236
Fnu4HI GCNGC 8 cut(s) 125, 399, 613, 770, 790, 1019, 1439, 1501
FokI GGATG 3 cut(s) 28, 286, 1121
FriOI GRGCYC 2 cut(s) 624, 1248
Fsp4HI GCNGC 8 cut(s) 125, 399, 613, 770, 790, 1019, 1439, 1501
FspBI CTAG 3 cut(s) 24, 833, 1507
GluI GCNGC 8 cut(s) 125, 399, 613, 770, 790, 1019, 1439, 1501
HaeIII GGCC 1 cut(s) 464
HapII CCGG 2 cut(s) 314, 1343
HincII GTYRAC 2 cut(s) 21, 453
HindII GTYRAC 2 cut(s) 21, 453
HinfI GANTC 4 cut(s) 284, 797, 1142, 1286
HpaII CCGG 2 cut(s) 314, 1343
HphI GGTGA 4 cut(s) 113, 200, 833, 1357
Hpy166II GTNNAC 4 cut(s) 21, 453, 996, 1051
Hpy188I TCNGA 3 cut(s) 289, 601, 865
Hpy188III TCNNGA 3 cut(s) 196, 1234, 1406
Hpy8I GTNNAC 4 cut(s) 21, 453, 996, 1051
Hpy99I CGWCG 2 cut(s) 667, 1120
HpyAV CCTTC 1 cut(s) 1503
HpyCH4III ACNGT 3 cut(s) 733, 739, 871
HpyCH4IV ACGT 4 cut(s) 449, 662, 1115, 1471
HpyF10VI GCNNNNNNNGC 2 cut(s) 407, 1184
HpyF3I CTNAG 2 cut(s) 286, 882
HpySE526I ACGT 4 cut(s) 449, 662, 1115, 1471
Ksp22I TGATCA 4 cut(s) 103, 171, 259, 1236
Kzo9I GATC 7 cut(s) 103, 171, 259, 484, 514, 565, 1236
LmnI GCTCC 5 cut(s) 602, 704, 924, 1251, 1495
Lsp1109I GCAGC 6 cut(s) 385, 756, 776, 1030, 1450, 1487
LweI GCATC 3 cut(s) 1071, 1099, 1198
MaeI CTAG 3 cut(s) 24, 833, 1507
MaeII ACGT 4 cut(s) 449, 662, 1115, 1471
MaeIII GTNAC 6 cut(s) 413, 733, 778, 848, 1028, 1366
MalI GATC 7 cut(s) 105, 173, 261, 486, 516, 567, 1238
MboI GATC 7 cut(s) 103, 171, 259, 484, 514, 565, 1236
MboII GAAGA 5 cut(s) 34, 505, 508, 1099, 1281
MfeI CAATTG 1 cut(s) 783
MhlI GDGCHC 3 cut(s) 624, 1079, 1248
MlyI GAGTC 2 cut(s) 278, 1295
MseI TTAA 2 cut(s) 530, 812
MslI CAYNNNNRTG 3 cut(s) 90, 213, 507
MspA1I CMGCKG 1 cut(s) 1500
MspI CCGG 2 cut(s) 314, 1343
MunI CAATTG 1 cut(s) 783
Mva1269I GAATGC 2 cut(s) 319, 828
MvnI CGCG 1 cut(s) 1120
MwoI GCNNNNNNNGC 2 cut(s) 407, 1184
NdeII GATC 7 cut(s) 103, 171, 259, 484, 514, 565, 1236
NlaIV GGNNCC 3 cut(s) 961, 1296, 1378
NmuCI GTSAC 3 cut(s) 413, 778, 1366
NspI RCATGY 1 cut(s) 89
PaeR7I CTCGAG 1 cut(s) 931
PagI TCATGA 1 cut(s) 195
PctI GAATGC 2 cut(s) 319, 828
PfeI GAWTC 2 cut(s) 797, 1142
PinAI ACCGGT 1 cut(s) 1342
PkrI GCNGC 8 cut(s) 126, 400, 614, 771, 791, 1020, 1440, 1502
Ple19I CGATCG 1 cut(s) 487
PleI GAGTC 2 cut(s) 278, 1294
PmaCI CACGTG 1 cut(s) 1472
PmlI CACGTG 1 cut(s) 1472
PpsI GAGTC 2 cut(s) 278, 1294
Ppu21I YACGTR 1 cut(s) 1472
PshAI GACNNNNGTC 1 cut(s) 425
PshBI ATTAAT 1 cut(s) 530
PsiI TTATAA 1 cut(s) 642
Psp124BI GAGCTC 1 cut(s) 1248
Psp1406I AACGTT 1 cut(s) 449
PspCI CACGTG 1 cut(s) 1472
PspN4I GGNNCC 3 cut(s) 961, 1296, 1378
PspPI GGNCC 2 cut(s) 959, 1377
PspXI VCTCGAGB 1 cut(s) 931
PstI CTGCAG 1 cut(s) 403
PvuI CGATCG 1 cut(s) 487
PvuII CAGCTG 1 cut(s) 1500
RsaI GTAC 5 cut(s) 140, 689, 741, 995, 1362
RsaNI GTAC 5 cut(s) 139, 688, 740, 994, 1361
RseI CAYNNNNRTG 3 cut(s) 90, 213, 507
SacI GAGCTC 1 cut(s) 1248
SaqAI TTAA 2 cut(s) 530, 812
SatI GCNGC 8 cut(s) 125, 399, 613, 770, 790, 1019, 1439, 1501
Sau3AI GATC 7 cut(s) 103, 171, 259, 484, 514, 565, 1236
Sau96I GGNCC 2 cut(s) 959, 1377
ScaI AGTACT 1 cut(s) 140
SchI GAGTC 2 cut(s) 278, 1295
SduI GDGCHC 3 cut(s) 624, 1079, 1248
SfaNI GCATC 3 cut(s) 1071, 1099, 1198
SfcI CTRYAG 1 cut(s) 399
Sfr274I CTCGAG 1 cut(s) 931
SgrAI CRCCGGYG 1 cut(s) 1342
SinI GGWCC 2 cut(s) 959, 1377
SlaI CTCGAG 1 cut(s) 931
SmiMI CAYNNNNRTG 3 cut(s) 90, 213, 507
SmlI CTYRAG 1 cut(s) 931
SmoI CTYRAG 1 cut(s) 931
SpeI ACTAGT 1 cut(s) 23
SsiI CCGC 3 cut(s) 125, 226, 613
SspMI CTAG 3 cut(s) 24, 833, 1507
SstI GAGCTC 1 cut(s) 1248
StyI CCWWGG 2 cut(s) 272, 616
TaaI ACNGT 3 cut(s) 733, 739, 871
TaiI ACGT 4 cut(s) 452, 665, 1118, 1474
TaqI TCGA 4 cut(s) 357, 575, 932, 1330
TatI WGTACW 1 cut(s) 138
TauI GCSGC 2 cut(s) 127, 615
TfiI GAWTC 2 cut(s) 797, 1142
Tru1I TTAA 2 cut(s) 530, 812
Tru9I TTAA 2 cut(s) 530, 812
TscAI CASTG 1 cut(s) 736
TseFI GTSAC 3 cut(s) 413, 778, 1366
TseI GCWGC 6 cut(s) 398, 769, 789, 1018, 1438, 1500
Tsp45I GTSAC 3 cut(s) 413, 778, 1366
TspDTI ATGAA 7 cut(s) 20, 34, 122, 212, 263, 908, 1301
TspGWI ACGGA 2 cut(s) 171, 1038
TspRI CASTG 1 cut(s) 736
VpaK11BI GGWCC 2 cut(s) 959, 1377
VspI ATTAAT 1 cut(s) 530
XapI RAATTY 3 cut(s) 554, 1256, 1457
XceI RCATGY 1 cut(s) 89
XcmI CCANNNNNNNNNTGG 1 cut(s) 1101
XhoI CTCGAG 1 cut(s) 931
XspI CTAG 3 cut(s) 24, 833, 1507
ZrmI AGTACT 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.