Prupe.4G135900_v2.0.a1

Pentatricopeptide repeat-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
7510463 .. 7513867
3405 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G135900.1

Sequence Viewer

Length: 2811 bp
ATGTACTGGAAGTTTGGTCGTATAGGGTATGCGCGCTATATATTTGATAATATTCCAGAGAGAAATGAAGCTTCTTGGAACACGATGATGTCGGGTTATGTACGAGTAGGTTTGTACCCCGAATCGATTGGATTTTTTTCTGGAATGATTGGCCGCGGGTTTAAGCCAAGCGGGTTTGTCATTGCTAGTTTGATAACTGCGTGTGATAAGTCGGCTTGTATGTTTAATGAAGGATTGCAAGTTCATGCTTTTGTAGTTAAAATTGGTTTGTTATGTGATGTCTTTGTTGGTACTTCTCTTTTGCACTTTTATGGCACCTATGGTCTTGTGTCTAAATCCCGGAAGCTCTTTGAGGAGATGCCGGATAAGAATGTGGTTACTTGGACTTCTTTGATTGTTGGACATTCAAATAATGGAGATTTGGGAGAAGTTATTAGTATATATAAGCGTATGAGACTTGAAGGAGTATGTTGCAATGATAACACATTTGCTATAGTCATTAGTACTTGTGGGATGCTGGAGGATGAGCTATTGGGTCACCAAGTTCTTGGACATGTTATGAAACTTGGACTAGAGAATAGTGTCTCTGTGGCAAATTCCCTCATATCCATGTATGGTGGCTGTGGTAATGTGGACGAGGCCTTCTATGTCTTTGATCACATGGATGAACGTGACATAATCTCATGGAATTCGATTATTTCTGCAAGTGCGCAAAATGGGCTTTGTGAAGAATCATTAAGGTGTTTTCACTATATGCGGCATGTTAATAAAGAAGTGAATTCCACAACACTTTCATCATTGTTGACAGTCTGTGGTTGCACTGATAAACTGAAGTGGGGCAGTGGAATTCATGGACTAGTAGTAAAATTTGGGCTGGAATCAAATGTTTGTGTTGGCAATACTCTTATAAGTATGTATTCTGAAGCTGGAAGATCAGAAGATGCTGAGTTAGTTTTCCAAAGAATGACAGAGAAGGATATAATCTCATGGAACTCTATGTTAGCATGCTATGTTCAGAATGAGGAGTGCCAAAAAGCCTTGAAACTTTTTGCTAAAATGCTTCGGATGAGAAAACCAGTAACTTATGTGACTTTAACAAGTGCACTATCTGCCTGTCCGAACTCTGAATTTCTCATTCCAGGGAAAATTCTTCATGCTATTGCAGTCCTTACAGGCCTACAAGACAATGTGATAATTGGCAATGCACTAGTTACCATGTACGGAAAGTTTAGTATGATGGTTGAAGCTGAAAAGGTATTGCAAATAATGCCCAAGCGAGATGAAGTTACTTGGAATGCCCTTATTGGTGGTTATGCCAAGAGCAAAGATCCAAATGAGGTGATAAAAGCTTTTAAATTAATGAGAGAAGAAGGAACTCCAGCAAACTACATCACAATAATCAATGTTCTTGGTGGTTTTATGACTCCTGGTGATTTACTAAAACATGGAATGCCCTTCCATGCACATATAGTTCTAACAGGATTTGAGTCAGACAAACATGTTCAGAGTACCCTTATAACAATGTATGCTAAGTGTGGTGATTTGAATTCAAGTAATTCCATATTCAATGGATTAGATTTTAAGAACTCCATTGCATGGAATGCAATCATTGCTGCAAATGCTAATCATGGGTTAGAGAAAGCTTTGAAACTTGTTGTGATGATGAAGAAAGCTGGAGTAGACTTAGATCAGTTCAGCTTTTCAGTGGCACTTTCTGTTAGTGCTGACCTGGCTATGTTGGAGGAAGGCCAACAGCTTCATGGCCTGGTAGTTAAGCTTGGTTTTGACTCGGACCATTATGTTACAAATGCTGCCATGGATATGTATGGAAAATGTGGGGAGATGGAGGATGTTTTGAAATTACTTCCCTCTCCAACCAACAGATCACGATTATCATGGAACATTTTGATATCATCTTTTGCCAAACATGGGTGTTTCCAGAAGGCTAGGGAAGCTTTTCAGGAAATGCTAAATCTTGGTACAAAACCTGACCATGTCACCTTTGTTTCACTTCTGTCTGCTTGCAGTCATGGGGGTCTGGTGGATGATGGTCTTGCATACTATTATGCAATGACCACAGAGTTTGGTGTCCCACCAGGAATAGAGCATTGTGTGTGCATAATTGATCTTCTTGGACGATCAGGAAGGCTTGCTGAAGCTGAAAATTTCATAAAAGGAATGGTTGTCCAGCCAAATGACCTTGTGTGGCGGAGCTTGTTGGCTGCATGTAAAATCCATCGTAATGTAGAGCTAGGGAGGAAAGCTGCAGAACATCTTCTGGAGTTAGATCCATCAGATGATTCGGCTTATGTTCTTTTGTCAAATGTCTGTGCAACTACCGGTAGATGGGAGGAAGTAGAGAATGTAAGGAGGCAGATGGGATCGAGAAACATAATGAAGAAGCCTGCATGCAGTTGGGTCAAGTTGAAAACTGAGGTGAATAAATTTGGGATGGGAGAGCAATCCCATCCACAGACAGGGCAGATTTATGCCAAGTTGGGAGAGCTTATGAAGATGATTAGAGAAGCAGGTTATGTTCCTGATACAAGCTATGCACTGCAGGATACAGATGAAGAACAGAAGGAGCATAATCTTTGGAACCACAGTGAGAGAATTGCCCTTGCTTTCGGATTGATCAATACTCCAAAAGGTTCACCTGTTAAGGTTTTCAAGAATCTTCGTGTATGTGGTGATTGTCATTCTGTCTACAAGCATGTTAGTGCAGCAGTTGGGCGGAAAATCATACTGAGAGATCCTTACCGGTTTCACCATTTCAGTGACGGCAAGTGTTCTTGTTCTGATTACTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

937

Amino Acids

103.93

Weight (kDa)

6.52

Isoelectric Point (pI)

36.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013464)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 908, 1517
Acc16I TGCGCA 1 cut(s) 711
Acc36I ACCTGC 1 cut(s) 2519
AccB1I GGYRCC 1 cut(s) 314
AccB7I CCANNNNNTGG 1 cut(s) 1596
AccI GTMKAC 2 cut(s) 1680, 2706
AccII CGCG 2 cut(s) 34, 156
AciI CCGC 6 cut(s) 154, 156, 171, 757, 2209, 2734
AclWI GGATC 4 cut(s) 1322, 2282, 2389, 2747
AcoI YGGCCR 1 cut(s) 151
AcuI CTGAAG 3 cut(s) 851, 942, 2175
AfaI GTAC 8 cut(s) 5, 102, 116, 292, 505, 1220, 1510, 1981
AfiI CCNNNNNNNGG 4 cut(s) 1596, 1929, 2346, 2477
AflIII ACRYGT 2 cut(s) 553, 1498
AgeI ACCGGT 2 cut(s) 2339, 2760
AhlI ACTAGT 2 cut(s) 856, 1207
AjnI CCWGG 5 cut(s) 1138, 1426, 1728, 1764, 2095
AloI GAACNNNNNNTCC 2 cut(s) 225, 257
Alw21I GWGCWC 1 cut(s) 1105
Alw26I GTCTC 2 cut(s) 448, 589
Alw44I GTGCAC 1 cut(s) 1101
AlwI GGATC 4 cut(s) 1322, 2282, 2389, 2747
AoxI GGCC 5 cut(s) 151, 639, 1174, 1747, 1762
ApaLI GTGCAC 1 cut(s) 1101
ApeKI GCWGC 5 cut(s) 1613, 1811, 2222, 2264, 2723
AseI ATTAAT 1 cut(s) 1358
AsiGI ACCGGT 2 cut(s) 2339, 2760
Asp700I GAANNNNTTC 2 cut(s) 1956, 2274
AspLEI GCGC 3 cut(s) 34, 36, 712
AspS9I GGNCC 1 cut(s) 1792
AsuC2I CCSGG 1 cut(s) 340
AsuHPI GGTGA 9 cut(s) 530, 1351, 1442, 1550, 1990, 2449, 2646, 2702, 2759
AvaII GGWCC 1 cut(s) 1792
BaeGI GKGCMC 1 cut(s) 1105
BanI GGYRCC 1 cut(s) 314
Bbv12I GWGCWC 1 cut(s) 1105
BbvI GCAGC 5 cut(s) 1600, 1798, 2209, 2251, 2735
BccI CCATC 9 cut(s) 1231, 1837, 2042, 2244, 2299, 2340, 2371, 2446, 2475
BceAI ACGGC 1 cut(s) 2797
BciT130I CCWGG 5 cut(s) 1140, 1428, 1730, 1766, 2097
BciVI GTATCC 1 cut(s) 2557
BclI TGATCA 2 cut(s) 655, 2634
BcnI CCSGG 1 cut(s) 340
BcoDI GTCTC 2 cut(s) 448, 589
BcuI ACTAGT 2 cut(s) 856, 1207
BfaI CTAG 6 cut(s) 186, 572, 857, 1208, 1947, 2252
BfmI CTRYAG 3 cut(s) 492, 2265, 2558
BfuAI ACCTGC 1 cut(s) 2519
BfuI GTATCC 1 cut(s) 2557
BisI GCNGC 7 cut(s) 154, 758, 1614, 1812, 2223, 2265, 2724
BlsI GCNGC 7 cut(s) 155, 759, 1615, 1813, 2224, 2266, 2725
BmcAI AGTACT 1 cut(s) 505
Bme1390I CCNGG 6 cut(s) 340, 1140, 1428, 1730, 1766, 2097
Bme18I GGWCC 1 cut(s) 1792
BmgT120I GGNCC 1 cut(s) 1792
BmiI GGNNCC 2 cut(s) 316, 2600
BmrFI CCNGG 6 cut(s) 340, 1140, 1428, 1730, 1766, 2097
BmsI GCATC 3 cut(s) 348, 504, 931
BpmI CTGGAG 4 cut(s) 539, 1362, 1695, 2300
BpuMI CCSGG 1 cut(s) 340
Bsa29I ATCGAT 1 cut(s) 125
BsaJI CCNNGG 3 cut(s) 154, 1139, 1815
BsaWI WCCGGW 2 cut(s) 2339, 2760
Bsc4I CCNNNNNNNGG 4 cut(s) 1596, 1929, 2346, 2477
Bse118I RCCGGY 2 cut(s) 2339, 2760
Bse1I ACTGG 3 cut(s) 11, 1076, 2810
Bse3DI GCAATG 6 cut(s) 180, 481, 1207, 1590, 1608, 2076
BseBI CCWGG 5 cut(s) 1140, 1428, 1730, 1766, 2097
BseCI ATCGAT 1 cut(s) 125
BseDI CCNNGG 3 cut(s) 154, 1139, 1815
BseGI GGATG 8 cut(s) 519, 529, 670, 1071, 1855, 2050, 2457, 2467
BseLI CCNNNNNNNGG 4 cut(s) 1596, 1929, 2346, 2477
BseMI GCAATG 6 cut(s) 180, 481, 1207, 1590, 1608, 2076
BseMII CTCAG 3 cut(s) 936, 2424, 2738
BseNI ACTGG 3 cut(s) 11, 1076, 2810
BsePI GCGCGC 1 cut(s) 32
BseRI GAGGAG 2 cut(s) 368, 1037
BseSI GKGCMC 1 cut(s) 1105
BseXI GCAGC 5 cut(s) 1600, 1798, 2209, 2251, 2735
BsgI GTGCAG 1 cut(s) 2742
Bsh1236I CGCG 2 cut(s) 34, 156
BshFI GGCC 5 cut(s) 153, 641, 1176, 1749, 1764
BshNI GGYRCC 1 cut(s) 314
BshTI ACCGGT 2 cut(s) 2339, 2760
BshVI ATCGAT 1 cut(s) 125
BsiHKAI GWGCWC 1 cut(s) 1105
BsiSI CCGG 4 cut(s) 340, 362, 2340, 2761
BslFI GGGAC 1 cut(s) 2075
BslI CCNNNNNNNGG 4 cut(s) 1596, 1929, 2346, 2477
BsmAI GTCTC 2 cut(s) 448, 589
BsmFI GGGAC 1 cut(s) 2075
BsmI GAATGC 3 cut(s) 1300, 1455, 1606
BsnI GGCC 5 cut(s) 153, 641, 1176, 1749, 1764
Bsp1286I GDGCHC 1 cut(s) 1105
Bsp19I CCATGG 1 cut(s) 1815
BspACI CCGC 6 cut(s) 154, 156, 171, 757, 2209, 2734
BspANI GGCC 5 cut(s) 153, 641, 1176, 1749, 1764
BspCNI CTCAG 3 cut(s) 937, 2425, 2739
BspDI ATCGAT 1 cut(s) 125
BspFNI CGCG 2 cut(s) 34, 156
BspLI GGNNCC 2 cut(s) 316, 2600
BspMAI CTGCAG 2 cut(s) 2269, 2562
BspMI ACCTGC 1 cut(s) 2519
BspPI GGATC 4 cut(s) 1322, 2282, 2389, 2747
BspT107I GGYRCC 1 cut(s) 314
BsrDI GCAATG 6 cut(s) 180, 481, 1207, 1590, 1608, 2076
BsrFI RCCGGY 2 cut(s) 2339, 2760
BsrI ACTGG 3 cut(s) 11, 1076, 2810
BssAI RCCGGY 2 cut(s) 2339, 2760
BssECI CCNNGG 3 cut(s) 154, 1139, 1815
BssHII GCGCGC 1 cut(s) 32
BssT1I CCWWGG 1 cut(s) 1815
Bst2UI CCWGG 5 cut(s) 1140, 1428, 1730, 1766, 2097
Bst4CI ACNGT 2 cut(s) 808, 2606
BstAPI GCANNNNNTGC 4 cut(s) 1109, 1267, 1601, 1610
BstC8I GCNNGC 6 cut(s) 34, 1006, 2023, 2151, 2406, 2410
BstDEI CTNAG 5 cut(s) 945, 1530, 1684, 2433, 2747
BstDSI CCRYGG 2 cut(s) 154, 1815
BstEII GGTNACC 1 cut(s) 536
BstF5I GGATG 8 cut(s) 519, 529, 670, 1071, 1855, 2050, 2457, 2467
BstFNI CGCG 2 cut(s) 34, 156
BstHHI GCGC 3 cut(s) 34, 36, 712
BstMAI GTCTC 2 cut(s) 448, 589
BstMWI GCNNNNNNNGC 8 cut(s) 718, 1109, 1267, 1601, 1610, 1619, 1730, 1952
BstNI CCWGG 5 cut(s) 1140, 1428, 1730, 1766, 2097
BstNSI RCATGY 7 cut(s) 557, 764, 1008, 1502, 2229, 2412, 2717
BstPI GGTNACC 1 cut(s) 536
BstSCI CCNGG 6 cut(s) 338, 1138, 1426, 1728, 1764, 2095
BstSFI CTRYAG 3 cut(s) 492, 2265, 2558
BstSLI GKGCMC 1 cut(s) 1105
BstUI CGCG 2 cut(s) 34, 156
BstV1I GCAGC 5 cut(s) 1600, 1798, 2209, 2251, 2735
BstX2I RGATCY 3 cut(s) 1327, 2287, 2752
BstXI CCANNNNNNTGG 1 cut(s) 548
BstYI RGATCY 3 cut(s) 1327, 2287, 2752
Bsu15I ATCGAT 1 cut(s) 125
BsuI GTATCC 1 cut(s) 2557
BsuRI GGCC 5 cut(s) 153, 641, 1176, 1749, 1764
BsuTUI ATCGAT 1 cut(s) 125
BtgI CCRYGG 2 cut(s) 154, 1815
BtsCI GGATG 8 cut(s) 519, 529, 670, 1071, 1855, 2050, 2457, 2467
BtsI GCAGTG 2 cut(s) 847, 2555
BtsIMutI CAGTG 6 cut(s) 819, 847, 1710, 2555, 2611, 2782
BveI ACCTGC 1 cut(s) 2519
Cac8I GCNNGC 6 cut(s) 34, 1006, 2023, 2151, 2406, 2410
CfoI GCGC 3 cut(s) 34, 36, 712
Cfr10I RCCGGY 2 cut(s) 2339, 2760
Cfr13I GGNCC 1 cut(s) 1792
Cfr42I CCGCGG 1 cut(s) 157
ClaI ATCGAT 1 cut(s) 125
Csp6I GTAC 8 cut(s) 4, 101, 115, 291, 504, 1219, 1509, 1980
CspAI ACCGGT 2 cut(s) 2339, 2760
CspCI CAANNNNNGTGG 2 cut(s) 2065, 2100
CviQI GTAC 8 cut(s) 4, 101, 115, 291, 504, 1219, 1509, 1980
DdeI CTNAG 5 cut(s) 945, 1530, 1684, 2433, 2747
DraI TTTAAA 1 cut(s) 1354
EaeI YGGCCR 1 cut(s) 151
EciI GGCGGA 2 cut(s) 2224, 2749
Eco130I CCWWGG 1 cut(s) 1815
Eco147I AGGCCT 2 cut(s) 641, 1176
Eco32I GATATC 1 cut(s) 1911
Eco47I GGWCC 1 cut(s) 1792
Eco57I CTGAAG 3 cut(s) 851, 942, 2175
Eco91I GGTNACC 1 cut(s) 536
EcoO65I GGTNACC 1 cut(s) 536
EcoRI GAATTC 4 cut(s) 688, 778, 846, 1546
EcoRII CCWGG 5 cut(s) 1138, 1426, 1728, 1764, 2095
EcoRV GATATC 1 cut(s) 1911
EcoT14I CCWWGG 1 cut(s) 1815
ErhI CCWWGG 1 cut(s) 1815
FaqI GGGAC 1 cut(s) 2075
FauI CCCGC 2 cut(s) 149, 164
FbaI TGATCA 2 cut(s) 655, 2634
FblI GTMKAC 2 cut(s) 1680, 2706
Fnu4HI GCNGC 7 cut(s) 154, 758, 1614, 1812, 2223, 2265, 2724
FokI GGATG 8 cut(s) 526, 536, 677, 1078, 1862, 2057, 2454, 2464
Fsp4HI GCNGC 7 cut(s) 154, 758, 1614, 1812, 2223, 2265, 2724
FspBI CTAG 6 cut(s) 186, 572, 857, 1208, 1947, 2252
FspI TGCGCA 1 cut(s) 711
GlaI GCGC 3 cut(s) 33, 35, 711
GluI GCNGC 7 cut(s) 154, 758, 1614, 1812, 2223, 2265, 2724
GsuI CTGGAG 4 cut(s) 539, 1362, 1695, 2300
HaeIII GGCC 5 cut(s) 153, 641, 1176, 1749, 1764
HapII CCGG 4 cut(s) 340, 362, 2340, 2761
HhaI GCGC 3 cut(s) 34, 36, 712
Hin6I GCGC 3 cut(s) 32, 34, 710
HinP1I GCGC 3 cut(s) 32, 34, 710
HincII GTYRAC 1 cut(s) 804
HindII GTYRAC 1 cut(s) 804
HindIII AAGCTT 5 cut(s) 69, 1347, 1641, 1775, 1953
HinfI GANTC 8 cut(s) 122, 731, 878, 1423, 1487, 1787, 2300, 2674
HpaII CCGG 4 cut(s) 340, 362, 2340, 2761
HphI GGTGA 9 cut(s) 530, 1351, 1442, 1550, 1990, 2449, 2646, 2702, 2759
Hpy166II GTNNAC 6 cut(s) 634, 804, 1103, 1681, 2654, 2707
Hpy8I GTNNAC 6 cut(s) 634, 804, 1103, 1681, 2654, 2707
HpyCH4III ACNGT 2 cut(s) 808, 2606
HpyCH4IV ACGT 1 cut(s) 670
HpyF10VI GCNNNNNNNGC 8 cut(s) 718, 1109, 1267, 1601, 1610, 1619, 1730, 1952
HpyF3I CTNAG 5 cut(s) 945, 1530, 1684, 2433, 2747
HpySE526I ACGT 1 cut(s) 670
HspAI GCGC 3 cut(s) 32, 34, 710
Ksp22I TGATCA 2 cut(s) 655, 2634
KspI CCGCGG 1 cut(s) 157
LmnI GCTCC 2 cut(s) 2211, 2584
Lsp1109I GCAGC 5 cut(s) 1600, 1798, 2209, 2251, 2735
LweI GCATC 3 cut(s) 348, 504, 931
MaeI CTAG 6 cut(s) 186, 572, 857, 1208, 1947, 2252
MaeII ACGT 1 cut(s) 670
MflI RGATCY 3 cut(s) 1327, 2287, 2752
MhlI GDGCHC 1 cut(s) 1105
MlyI GAGTC 3 cut(s) 1417, 1496, 1781
MmeI TCCRAC 3 cut(s) 379, 1719, 1898
MroXI GAANNNNTTC 2 cut(s) 1956, 2274
MslI CAYNNNNRTG 9 cut(s) 86, 309, 608, 663, 739, 1820, 2241, 2718, 2775
MspA1I CMGCKG 1 cut(s) 156
MspI CCGG 4 cut(s) 340, 362, 2340, 2761
MspR9I CCNGG 6 cut(s) 340, 1140, 1428, 1730, 1766, 2097
Mva1269I GAATGC 3 cut(s) 1300, 1455, 1606
MvaI CCWGG 5 cut(s) 1140, 1428, 1730, 1766, 2097
MvnI CGCG 2 cut(s) 34, 156
MwoI GCNNNNNNNGC 8 cut(s) 718, 1109, 1267, 1601, 1610, 1619, 1730, 1952
NciI CCSGG 1 cut(s) 340
NcoI CCATGG 1 cut(s) 1815
NlaIV GGNNCC 2 cut(s) 316, 2600
NmuCI GTSAC 5 cut(s) 536, 671, 1087, 1996, 2777
NsbI TGCGCA 1 cut(s) 711
NspI RCATGY 7 cut(s) 557, 764, 1008, 1502, 2229, 2412, 2717
PaeI GCATGC 2 cut(s) 1008, 2412
PauI GCGCGC 1 cut(s) 32
PceI AGGCCT 2 cut(s) 641, 1176
PciI ACATGT 2 cut(s) 553, 1498
PctI GAATGC 3 cut(s) 1300, 1455, 1606
PdmI GAANNNNTTC 2 cut(s) 1956, 2274
PfeI GAWTC 5 cut(s) 122, 731, 878, 2300, 2674
PflFI GACNNNGTC 1 cut(s) 1994
PflMI CCANNNNNTGG 1 cut(s) 1596
PfoI TCCNGGA 1 cut(s) 338
PinAI ACCGGT 2 cut(s) 2339, 2760
PkrI GCNGC 7 cut(s) 155, 759, 1615, 1813, 2224, 2266, 2725
PleI GAGTC 3 cut(s) 1417, 1495, 1781
PpsI GAGTC 3 cut(s) 1417, 1495, 1781
PscI ACATGT 2 cut(s) 553, 1498
PshBI ATTAAT 1 cut(s) 1358
PsiI TTATAA 2 cut(s) 908, 1517
Psp6I CCWGG 5 cut(s) 1138, 1426, 1728, 1764, 2095
PspEI GGTNACC 1 cut(s) 536
PspGI CCWGG 5 cut(s) 1138, 1426, 1728, 1764, 2095
PspN4I GGNNCC 2 cut(s) 316, 2600
PspPI GGNCC 1 cut(s) 1792
PstI CTGCAG 2 cut(s) 2269, 2562
PsuI RGATCY 3 cut(s) 1327, 2287, 2752
PsyI GACNNNGTC 1 cut(s) 1994
PteI GCGCGC 1 cut(s) 32
RsaI GTAC 8 cut(s) 5, 102, 116, 292, 505, 1220, 1510, 1981
RsaNI GTAC 8 cut(s) 4, 101, 115, 291, 504, 1219, 1509, 1980
RseI CAYNNNNRTG 9 cut(s) 86, 309, 608, 663, 739, 1820, 2241, 2718, 2775
SacII CCGCGG 1 cut(s) 157
SatI GCNGC 7 cut(s) 154, 758, 1614, 1812, 2223, 2265, 2724
Sau96I GGNCC 1 cut(s) 1792
ScaI AGTACT 1 cut(s) 505
SchI GAGTC 3 cut(s) 1417, 1496, 1781
ScrFI CCNGG 6 cut(s) 340, 1140, 1428, 1730, 1766, 2097
SduI GDGCHC 1 cut(s) 1105
SfaNI GCATC 3 cut(s) 348, 504, 931
SfcI CTRYAG 3 cut(s) 492, 2265, 2558
Sfr303I CCGCGG 1 cut(s) 157
SgrBI CCGCGG 1 cut(s) 157
SinI GGWCC 1 cut(s) 1792
SmiMI CAYNNNNRTG 9 cut(s) 86, 309, 608, 663, 739, 1820, 2241, 2718, 2775
SpeI ACTAGT 2 cut(s) 856, 1207
SphI GCATGC 2 cut(s) 1008, 2412
SseBI AGGCCT 2 cut(s) 641, 1176
SsiI CCGC 6 cut(s) 154, 156, 171, 757, 2209, 2734
SspI AATATT 1 cut(s) 52
SspMI CTAG 6 cut(s) 186, 572, 857, 1208, 1947, 2252
StuI AGGCCT 2 cut(s) 641, 1176
StyD4I CCNGG 6 cut(s) 338, 1138, 1426, 1728, 1764, 2095
StyI CCWWGG 1 cut(s) 1815
TaaI ACNGT 2 cut(s) 808, 2606
TaiI ACGT 1 cut(s) 673
TaqI TCGA 3 cut(s) 125, 692, 2384
TatI WGTACW 2 cut(s) 3, 503
TauI GCSGC 2 cut(s) 156, 760
TfiI GAWTC 5 cut(s) 122, 731, 878, 2300, 2674
TscAI CASTG 6 cut(s) 826, 847, 1710, 2562, 2611, 2782
TseFI GTSAC 5 cut(s) 536, 671, 1087, 1996, 2777
TseI GCWGC 5 cut(s) 1613, 1811, 2222, 2264, 2723
Tsp45I GTSAC 5 cut(s) 536, 671, 1087, 1996, 2777
TspGWI ACGGA 1 cut(s) 1236
TspRI CASTG 6 cut(s) 826, 847, 1710, 2562, 2611, 2782
Tth111I GACNNNGTC 1 cut(s) 1994
Van91I CCANNNNNTGG 1 cut(s) 1596
VneI GTGCAC 1 cut(s) 1101
VpaK11BI GGWCC 1 cut(s) 1792
VspI ATTAAT 1 cut(s) 1358
XceI RCATGY 7 cut(s) 557, 764, 1008, 1502, 2229, 2412, 2717
XcmI CCANNNNNNNNNTGG 1 cut(s) 1757
XmiI GTMKAC 2 cut(s) 1680, 2706
XmnI GAANNNNTTC 2 cut(s) 1956, 2274
XspI CTAG 6 cut(s) 186, 572, 857, 1208, 1947, 2252
ZrmI AGTACT 1 cut(s) 505
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.