mitochondrial gene expression
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G75980 AT1G75980 |
| fragaria_vesca | FvH4_3g18360 |
| malus_domestica | MD03G1242500.v1.1 |
| prunus_persica | Prupe.4G165400_v2.0.a1 |
| pyrus_communis | pycom11g23170 |
| rosa_chinensis | RchiOBHm_Chr5g0031011 |
| rosa_laevigata | RLG00000033280 |
| rosa_multiflora | Rmu_sc0001523.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00049220 Rroxscaffold_1G00071310 |
| rosa_rugosa | Rorug05G0122300 |
| rosa_samantha | Rh4DG170500 Rh5BG214600 Rh5CG238400 Rh5DG219100 |
| rosa_wichuraiana | Rw3G027050 Rw5G019710 Rw6G016970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 67 |
| AclWI | GGATC | 2 cut(s) | 59, 433 |
| AfaI | GTAC | 2 cut(s) | 90, 572 |
| AgsI | TTSAA | 4 cut(s) | 23, 134, 286, 566 |
| AjnI | CCWGG | 1 cut(s) | 175 |
| AluBI | AGCT | 1 cut(s) | 73 |
| AluI | AGCT | 1 cut(s) | 73 |
| Alw26I | GTCTC | 1 cut(s) | 151 |
| AlwI | GGATC | 2 cut(s) | 59, 433 |
| Aor13HI | TCCGGA | 1 cut(s) | 67 |
| ApeKI | GCWGC | 4 cut(s) | 73, 384, 460, 482 |
| AseI | ATTAAT | 1 cut(s) | 452 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 105 |
| AspLEI | GCGC | 1 cut(s) | 333 |
| BbsI | GAAGAC | 1 cut(s) | 108 |
| BbvI | GCAGC | 4 cut(s) | 60, 396, 472, 494 |
| BciT130I | CCWGG | 1 cut(s) | 177 |
| BcoDI | GTCTC | 1 cut(s) | 151 |
| BisI | GCNGC | 4 cut(s) | 74, 385, 461, 483 |
| BlsI | GCNGC | 4 cut(s) | 75, 386, 462, 484 |
| Bme1390I | CCNGG | 1 cut(s) | 177 |
| BmiI | GGNNCC | 1 cut(s) | 234 |
| BmrFI | CCNGG | 1 cut(s) | 177 |
| BmsI | GCATC | 1 cut(s) | 382 |
| BpiI | GAAGAC | 1 cut(s) | 108 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 347, 379 |
| BpmI | CTGGAG | 1 cut(s) | 144 |
| BsaWI | WCCGGW | 1 cut(s) | 67 |
| Bse1I | ACTGG | 1 cut(s) | 328 |
| BseAI | TCCGGA | 1 cut(s) | 67 |
| BseBI | CCWGG | 1 cut(s) | 177 |
| BseGI | GGATG | 1 cut(s) | 397 |
| BseMII | CTCAG | 2 cut(s) | 378, 572 |
| BseNI | ACTGG | 1 cut(s) | 328 |
| BseRI | GAGGAG | 1 cut(s) | 108 |
| BseXI | GCAGC | 4 cut(s) | 60, 396, 472, 494 |
| BsiSI | CCGG | 1 cut(s) | 68 |
| BsmAI | GTCTC | 1 cut(s) | 151 |
| BsmBI | CGTCTC | 1 cut(s) | 151 |
| BsmI | GAATGC | 1 cut(s) | 346 |
| Bsp13I | TCCGGA | 1 cut(s) | 67 |
| Bsp143I | GATC | 3 cut(s) | 64, 301, 425 |
| BspCNI | CTCAG | 2 cut(s) | 377, 573 |
| BspEI | TCCGGA | 1 cut(s) | 67 |
| BspLI | GGNNCC | 1 cut(s) | 234 |
| BspPI | GGATC | 2 cut(s) | 59, 433 |
| BsrI | ACTGG | 1 cut(s) | 328 |
| BssMI | GATC | 3 cut(s) | 64, 301, 425 |
| Bst2UI | CCWGG | 1 cut(s) | 177 |
| Bst6I | CTCTTC | 2 cut(s) | 130, 561 |
| BstDEI | CTNAG | 2 cut(s) | 364, 581 |
| BstF5I | GGATG | 1 cut(s) | 397 |
| BstHHI | GCGC | 1 cut(s) | 333 |
| BstKTI | GATC | 3 cut(s) | 67, 304, 428 |
| BstMAI | GTCTC | 1 cut(s) | 151 |
| BstMBI | GATC | 3 cut(s) | 64, 301, 425 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 79, 469 |
| BstNI | CCWGG | 1 cut(s) | 177 |
| BstSCI | CCNGG | 1 cut(s) | 175 |
| BstV1I | GCAGC | 4 cut(s) | 60, 396, 472, 494 |
| BstV2I | GAAGAC | 1 cut(s) | 108 |
| BstX2I | RGATCY | 1 cut(s) | 64 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 209, 531 |
| BstYI | RGATCY | 1 cut(s) | 64 |
| BtsCI | GGATG | 1 cut(s) | 397 |
| BtsI | GCAGTG | 2 cut(s) | 270, 313 |
| BtsIMutI | CAGTG | 2 cut(s) | 270, 313 |
| CfoI | GCGC | 1 cut(s) | 333 |
| Csp6I | GTAC | 2 cut(s) | 89, 571 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 225, 260 |
| CviAII | CATG | 3 cut(s) | 53, 242, 514 |
| CviJI | RGCY | 8 cut(s) | 73, 82, 137, 175, 233, 368, 463, 535 |
| CviKI_1 | RGCY | 8 cut(s) | 73, 82, 137, 175, 233, 368, 463, 535 |
| CviQI | GTAC | 2 cut(s) | 89, 571 |
| DdeI | CTNAG | 2 cut(s) | 364, 581 |
| DpnI | GATC | 3 cut(s) | 66, 303, 427 |
| DpnII | GATC | 3 cut(s) | 64, 301, 425 |
| Eam1104I | CTCTTC | 2 cut(s) | 130, 561 |
| EarI | CTCTTC | 2 cut(s) | 130, 561 |
| EcoRII | CCWGG | 1 cut(s) | 175 |
| Esp3I | CGTCTC | 1 cut(s) | 151 |
| FaeI | CATG | 3 cut(s) | 56, 245, 517 |
| FaiI | YATR | 6 cut(s) | 54, 170, 243, 402, 501, 515 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 414, 446, 537, 569 |
| FatI | CATG | 3 cut(s) | 52, 241, 513 |
| Fnu4HI | GCNGC | 4 cut(s) | 74, 385, 461, 483 |
| FokI | GGATG | 1 cut(s) | 404 |
| Fsp4HI | GCNGC | 4 cut(s) | 74, 385, 461, 483 |
| GlaI | GCGC | 1 cut(s) | 332 |
| GluI | GCNGC | 4 cut(s) | 74, 385, 461, 483 |
| GsuI | CTGGAG | 1 cut(s) | 144 |
| HapII | CCGG | 1 cut(s) | 68 |
| HhaI | GCGC | 1 cut(s) | 333 |
| Hin1II | CATG | 3 cut(s) | 56, 245, 517 |
| Hin6I | GCGC | 1 cut(s) | 331 |
| HinP1I | GCGC | 1 cut(s) | 331 |
| HinfI | GANTC | 3 cut(s) | 267, 356, 548 |
| HpaII | CCGG | 1 cut(s) | 68 |
| Hpy188I | TCNGA | 1 cut(s) | 301 |
| Hpy188III | TCNNGA | 3 cut(s) | 68, 161, 563 |
| HpyAV | CCTTC | 3 cut(s) | 116, 254, 488 |
| HpyCH4V | TGCA | 3 cut(s) | 35, 344, 384 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 79, 469 |
| HpyF3I | CTNAG | 2 cut(s) | 364, 581 |
| Hsp92II | CATG | 3 cut(s) | 56, 245, 517 |
| HspAI | GCGC | 1 cut(s) | 331 |
| Kpn2I | TCCGGA | 1 cut(s) | 67 |
| Kzo9I | GATC | 3 cut(s) | 64, 301, 425 |
| LmnI | GCTCC | 3 cut(s) | 70, 163, 238 |
| LpnPI | CCDG | 8 cut(s) | 81, 111, 162, 174, 189, 309, 477, 537 |
| Lsp1109I | GCAGC | 4 cut(s) | 60, 396, 472, 494 |
| LweI | GCATC | 1 cut(s) | 382 |
| MaeIII | GTNAC | 1 cut(s) | 319 |
| MalI | GATC | 3 cut(s) | 66, 303, 427 |
| MboI | GATC | 3 cut(s) | 64, 301, 425 |
| MboII | GAAGA | 5 cut(s) | 74, 113, 117, 349, 578 |
| MflI | RGATCY | 1 cut(s) | 64 |
| MluCI | AATT | 2 cut(s) | 467, 475 |
| MlyI | GAGTC | 1 cut(s) | 365 |
| MmeI | TCCRAC | 1 cut(s) | 260 |
| MnlI | CCTC | 5 cut(s) | 120, 129, 133, 402, 576 |
| MroI | TCCGGA | 1 cut(s) | 67 |
| MroXI | GAANNNNTTC | 1 cut(s) | 105 |
| MseI | TTAA | 4 cut(s) | 252, 315, 452, 474 |
| MslI | CAYNNNNRTG | 2 cut(s) | 207, 512 |
| MspI | CCGG | 1 cut(s) | 68 |
| MspR9I | CCNGG | 1 cut(s) | 177 |
| Mva1269I | GAATGC | 1 cut(s) | 346 |
| MvaI | CCWGG | 1 cut(s) | 177 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 79, 469 |
| NdeII | GATC | 3 cut(s) | 64, 301, 425 |
| NlaIII | CATG | 3 cut(s) | 56, 245, 517 |
| NlaIV | GGNNCC | 1 cut(s) | 234 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 12 |
| PctI | GAATGC | 1 cut(s) | 346 |
| PdmI | GAANNNNTTC | 1 cut(s) | 105 |
| PfeI | GAWTC | 2 cut(s) | 267, 548 |
| PkrI | GCNGC | 4 cut(s) | 75, 386, 462, 484 |
| PleI | GAGTC | 1 cut(s) | 364 |
| PpsI | GAGTC | 1 cut(s) | 364 |
| PshBI | ATTAAT | 1 cut(s) | 452 |
| Psp6I | CCWGG | 1 cut(s) | 175 |
| PspGI | CCWGG | 1 cut(s) | 175 |
| PspN4I | GGNNCC | 1 cut(s) | 234 |
| PsuI | RGATCY | 1 cut(s) | 64 |
| RsaI | GTAC | 2 cut(s) | 90, 572 |
| RsaNI | GTAC | 2 cut(s) | 89, 571 |
| RseI | CAYNNNNRTG | 2 cut(s) | 207, 512 |
| SaqAI | TTAA | 4 cut(s) | 252, 315, 452, 474 |
| SatI | GCNGC | 4 cut(s) | 74, 385, 461, 483 |
| Sau3AI | GATC | 3 cut(s) | 64, 301, 425 |
| SchI | GAGTC | 1 cut(s) | 365 |
| ScrFI | CCNGG | 1 cut(s) | 177 |
| SetI | ASST | 4 cut(s) | 75, 108, 321, 413 |
| SfaNI | GCATC | 1 cut(s) | 382 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 207, 512 |
| Sse9I | AATT | 2 cut(s) | 467, 475 |
| StyD4I | CCNGG | 1 cut(s) | 175 |
| TasI | AATT | 2 cut(s) | 467, 475 |
| TatI | WGTACW | 1 cut(s) | 570 |
| TfiI | GAWTC | 2 cut(s) | 267, 548 |
| Tru1I | TTAA | 4 cut(s) | 252, 315, 452, 474 |
| Tru9I | TTAA | 4 cut(s) | 252, 315, 452, 474 |
| TscAI | CASTG | 2 cut(s) | 277, 313 |
| TseI | GCWGC | 4 cut(s) | 73, 384, 460, 482 |
| TspDTI | ATGAA | 3 cut(s) | 17, 69, 185 |
| TspGWI | ACGGA | 1 cut(s) | 118 |
| TspRI | CASTG | 2 cut(s) | 277, 313 |
| VspI | ATTAAT | 1 cut(s) | 452 |
| XmnI | GAANNNNTTC | 1 cut(s) | 105 |