mitochondrial gene expression
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G75980 AT1G75980 |
| fragaria_vesca | FvH4_3g18360 |
| malus_domestica | MD03G1242500.v1.1 |
| prunus_persica | Prupe.4G165400_v2.0.a1 |
| pyrus_communis | pycom11g23170 |
| rosa_chinensis | RchiOBHm_Chr5g0031011 |
| rosa_laevigata | RLG00000033280 |
| rosa_multiflora | Rmu_sc0001523.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00049220 Rroxscaffold_1G00071310 |
| rosa_rugosa | Rorug05G0122300 |
| rosa_samantha | Rh4DG170500 Rh5BG214600 Rh5CG238400 Rh5DG219100 |
| rosa_wichuraiana | Rw3G027050 Rw5G019710 Rw6G016970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 274 |
| AcuI | CTGAAG | 2 cut(s) | 120, 272 |
| AfaI | GTAC | 1 cut(s) | 191 |
| AgsI | TTSAA | 1 cut(s) | 134 |
| AluBI | AGCT | 2 cut(s) | 73, 82 |
| AluI | AGCT | 2 cut(s) | 73, 82 |
| Alw26I | GTCTC | 1 cut(s) | 151 |
| AoxI | GGCC | 1 cut(s) | 274 |
| ApeKI | GCWGC | 1 cut(s) | 73 |
| AsuHPI | GGTGA | 1 cut(s) | 29 |
| BbsI | GAAGAC | 1 cut(s) | 69 |
| BbvI | GCAGC | 1 cut(s) | 60 |
| BcoDI | GTCTC | 1 cut(s) | 151 |
| BglII | AGATCT | 1 cut(s) | 103 |
| BisI | GCNGC | 1 cut(s) | 74 |
| BlsI | GCNGC | 1 cut(s) | 75 |
| BmiI | GGNNCC | 1 cut(s) | 234 |
| BpiI | GAAGAC | 1 cut(s) | 69 |
| BpmI | CTGGAG | 1 cut(s) | 144 |
| Bpu10I | CCTNAGC | 1 cut(s) | 69 |
| Bse1I | ACTGG | 1 cut(s) | 187 |
| BseGI | GGATG | 1 cut(s) | 114 |
| BseMII | CTCAG | 1 cut(s) | 60 |
| BseNI | ACTGG | 1 cut(s) | 187 |
| BseXI | GCAGC | 1 cut(s) | 60 |
| BshFI | GGCC | 1 cut(s) | 276 |
| BsmAI | GTCTC | 1 cut(s) | 151 |
| BsmBI | CGTCTC | 1 cut(s) | 151 |
| BsmI | GAATGC | 1 cut(s) | 100 |
| BsnI | GGCC | 1 cut(s) | 276 |
| Bsp143I | GATC | 1 cut(s) | 103 |
| BspANI | GGCC | 1 cut(s) | 276 |
| BspCNI | CTCAG | 1 cut(s) | 61 |
| BspLI | GGNNCC | 1 cut(s) | 234 |
| BsrI | ACTGG | 1 cut(s) | 187 |
| BssMI | GATC | 1 cut(s) | 103 |
| Bst6I | CTCTTC | 1 cut(s) | 130 |
| BstDEI | CTNAG | 1 cut(s) | 69 |
| BstF5I | GGATG | 1 cut(s) | 114 |
| BstKTI | GATC | 1 cut(s) | 106 |
| BstMAI | GTCTC | 1 cut(s) | 151 |
| BstMBI | GATC | 1 cut(s) | 103 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 79 |
| BstV1I | GCAGC | 1 cut(s) | 60 |
| BstV2I | GAAGAC | 1 cut(s) | 69 |
| BstX2I | RGATCY | 1 cut(s) | 103 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 209 |
| BstYI | RGATCY | 1 cut(s) | 103 |
| BsuRI | GGCC | 1 cut(s) | 276 |
| BtsCI | GGATG | 1 cut(s) | 114 |
| Csp6I | GTAC | 1 cut(s) | 190 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 225, 260 |
| CviAII | CATG | 3 cut(s) | 32, 53, 182 |
| CviJI | RGCY | 7 cut(s) | 73, 82, 175, 228, 233, 248, 276 |
| CviKI_1 | RGCY | 7 cut(s) | 73, 82, 175, 228, 233, 248, 276 |
| CviQI | GTAC | 1 cut(s) | 190 |
| DdeI | CTNAG | 1 cut(s) | 69 |
| DpnI | GATC | 1 cut(s) | 105 |
| DpnII | GATC | 1 cut(s) | 103 |
| EaeI | YGGCCR | 1 cut(s) | 274 |
| Eam1104I | CTCTTC | 1 cut(s) | 130 |
| EarI | CTCTTC | 1 cut(s) | 130 |
| Eco57I | CTGAAG | 2 cut(s) | 120, 272 |
| Esp3I | CGTCTC | 1 cut(s) | 151 |
| FaeI | CATG | 3 cut(s) | 35, 56, 185 |
| FaiI | YATR | 5 cut(s) | 33, 54, 78, 170, 183 |
| FatI | CATG | 3 cut(s) | 31, 52, 181 |
| Fnu4HI | GCNGC | 1 cut(s) | 74 |
| FokI | GGATG | 1 cut(s) | 101 |
| Fsp4HI | GCNGC | 1 cut(s) | 74 |
| GluI | GCNGC | 1 cut(s) | 74 |
| GsuI | CTGGAG | 1 cut(s) | 144 |
| HaeIII | GGCC | 1 cut(s) | 276 |
| Hin1II | CATG | 3 cut(s) | 35, 56, 185 |
| HindIII | AAGCTT | 1 cut(s) | 80 |
| HinfI | GANTC | 1 cut(s) | 134 |
| HphI | GGTGA | 1 cut(s) | 29 |
| Hpy188I | TCNGA | 1 cut(s) | 252 |
| Hpy188III | TCNNGA | 1 cut(s) | 161 |
| HpyAV | CCTTC | 2 cut(s) | 247, 254 |
| HpyCH4V | TGCA | 2 cut(s) | 35, 76 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 79 |
| HpyF3I | CTNAG | 1 cut(s) | 69 |
| Hsp92II | CATG | 3 cut(s) | 35, 56, 185 |
| Kzo9I | GATC | 1 cut(s) | 103 |
| LmnI | GCTCC | 2 cut(s) | 163, 238 |
| LpnPI | CCDG | 3 cut(s) | 81, 174, 200 |
| Lsp1109I | GCAGC | 1 cut(s) | 60 |
| MalI | GATC | 1 cut(s) | 105 |
| MboI | GATC | 1 cut(s) | 103 |
| MboII | GAAGA | 4 cut(s) | 74, 113, 117, 269 |
| MflI | RGATCY | 1 cut(s) | 103 |
| MmeI | TCCRAC | 2 cut(s) | 162, 260 |
| MnlI | CCTC | 3 cut(s) | 120, 129, 133 |
| MslI | CAYNNNNRTG | 1 cut(s) | 207 |
| Mva1269I | GAATGC | 1 cut(s) | 100 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 79 |
| NdeII | GATC | 1 cut(s) | 103 |
| NlaIII | CATG | 3 cut(s) | 35, 56, 185 |
| NlaIV | GGNNCC | 1 cut(s) | 234 |
| PctI | GAATGC | 1 cut(s) | 100 |
| PfeI | GAWTC | 1 cut(s) | 134 |
| PkrI | GCNGC | 1 cut(s) | 75 |
| PspN4I | GGNNCC | 1 cut(s) | 234 |
| PsuI | RGATCY | 1 cut(s) | 103 |
| RsaI | GTAC | 1 cut(s) | 191 |
| RsaNI | GTAC | 1 cut(s) | 190 |
| RseI | CAYNNNNRTG | 1 cut(s) | 207 |
| SatI | GCNGC | 1 cut(s) | 74 |
| Sau3AI | GATC | 1 cut(s) | 103 |
| SetI | ASST | 2 cut(s) | 75, 84 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 207 |
| TatI | WGTACW | 1 cut(s) | 189 |
| TfiI | GAWTC | 1 cut(s) | 134 |
| TseI | GCWGC | 1 cut(s) | 73 |
| TspDTI | ATGAA | 4 cut(s) | 17, 36, 69, 185 |