mitochondrial gene expression
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G75980 AT1G75980 |
| fragaria_vesca | FvH4_3g18360 |
| malus_domestica | MD03G1242500.v1.1 |
| prunus_persica | Prupe.4G165400_v2.0.a1 |
| pyrus_communis | pycom11g23170 |
| rosa_chinensis | RchiOBHm_Chr5g0031011 |
| rosa_laevigata | RLG00000033280 |
| rosa_multiflora | Rmu_sc0001523.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00049220 Rroxscaffold_1G00071310 |
| rosa_rugosa | Rorug05G0122300 |
| rosa_samantha | Rh4DG170500 Rh5BG214600 Rh5CG238400 Rh5DG219100 |
| rosa_wichuraiana | Rw3G027050 Rw5G019710 Rw6G016970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 347 |
| AclWI | GGATC | 1 cut(s) | 237 |
| AcsI | RAATTY | 3 cut(s) | 17, 25, 223 |
| AflII | CTTAAG | 2 cut(s) | 179, 242 |
| AflIII | ACRYGT | 1 cut(s) | 169 |
| AgsI | TTSAA | 2 cut(s) | 214, 368 |
| AluBI | AGCT | 1 cut(s) | 287 |
| AluI | AGCT | 1 cut(s) | 287 |
| AlwI | GGATC | 1 cut(s) | 237 |
| ApeKI | GCWGC | 1 cut(s) | 161 |
| ApoI | RAATTY | 3 cut(s) | 17, 25, 223 |
| AspLEI | GCGC | 1 cut(s) | 261 |
| BbvI | GCAGC | 1 cut(s) | 148 |
| BccI | CCATC | 1 cut(s) | 393 |
| BclI | TGATCA | 1 cut(s) | 3 |
| BfrI | CTTAAG | 2 cut(s) | 179, 242 |
| BisI | GCNGC | 1 cut(s) | 162 |
| BlsI | GCNGC | 1 cut(s) | 163 |
| BmsI | GCATC | 1 cut(s) | 301 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 266, 298 |
| Bsa29I | ATCGAT | 1 cut(s) | 411 |
| BsaJI | CCNNGG | 1 cut(s) | 306 |
| BseCI | ATCGAT | 1 cut(s) | 411 |
| BseDI | CCNNGG | 1 cut(s) | 306 |
| BseGI | GGATG | 1 cut(s) | 316 |
| BseMII | CTCAG | 1 cut(s) | 297 |
| BseXI | GCAGC | 1 cut(s) | 148 |
| BshVI | ATCGAT | 1 cut(s) | 411 |
| Bsp143I | GATC | 2 cut(s) | 3, 229 |
| BspCNI | CTCAG | 1 cut(s) | 296 |
| BspDI | ATCGAT | 1 cut(s) | 411 |
| BspPI | GGATC | 1 cut(s) | 237 |
| BspTI | CTTAAG | 2 cut(s) | 179, 242 |
| BssECI | CCNNGG | 1 cut(s) | 306 |
| BssMI | GATC | 2 cut(s) | 3, 229 |
| BssT1I | CCWWGG | 1 cut(s) | 306 |
| BstAFI | CTTAAG | 2 cut(s) | 179, 242 |
| BstDEI | CTNAG | 1 cut(s) | 283 |
| BstF5I | GGATG | 1 cut(s) | 316 |
| BstHHI | GCGC | 1 cut(s) | 261 |
| BstKTI | GATC | 2 cut(s) | 6, 232 |
| BstMBI | GATC | 2 cut(s) | 3, 229 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 265 |
| BstNSI | RCATGY | 1 cut(s) | 173 |
| BstV1I | GCAGC | 1 cut(s) | 148 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 137 |
| Bsu15I | ATCGAT | 1 cut(s) | 411 |
| BsuTUI | ATCGAT | 1 cut(s) | 411 |
| BtsCI | GGATG | 1 cut(s) | 316 |
| BtsI | GCAGTG | 1 cut(s) | 241 |
| BtsIMutI | CAGTG | 1 cut(s) | 241 |
| CfoI | GCGC | 1 cut(s) | 261 |
| ClaI | ATCGAT | 1 cut(s) | 411 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 153, 188 |
| CviAII | CATG | 2 cut(s) | 110, 170 |
| CviJI | RGCY | 5 cut(s) | 161, 176, 203, 241, 287 |
| CviKI_1 | RGCY | 5 cut(s) | 161, 176, 203, 241, 287 |
| DdeI | CTNAG | 1 cut(s) | 283 |
| DpnI | GATC | 2 cut(s) | 5, 231 |
| DpnII | GATC | 2 cut(s) | 3, 229 |
| DraI | TTTAAA | 1 cut(s) | 295 |
| Eco130I | CCWWGG | 1 cut(s) | 306 |
| Eco32I | GATATC | 1 cut(s) | 196 |
| EcoRI | GAATTC | 2 cut(s) | 17, 25 |
| EcoRV | GATATC | 1 cut(s) | 196 |
| EcoT14I | CCWWGG | 1 cut(s) | 306 |
| ErhI | CCWWGG | 1 cut(s) | 306 |
| FaeI | CATG | 2 cut(s) | 113, 173 |
| FaiI | YATR | 8 cut(s) | 50, 98, 111, 120, 171, 339, 347, 357 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 254, 286 |
| FatI | CATG | 2 cut(s) | 109, 169 |
| FbaI | TGATCA | 1 cut(s) | 3 |
| Fnu4HI | GCNGC | 1 cut(s) | 162 |
| FokI | GGATG | 1 cut(s) | 323 |
| Fsp4HI | GCNGC | 1 cut(s) | 162 |
| GlaI | GCGC | 1 cut(s) | 260 |
| GluI | GCNGC | 1 cut(s) | 162 |
| HhaI | GCGC | 1 cut(s) | 261 |
| Hin1II | CATG | 2 cut(s) | 113, 173 |
| Hin6I | GCGC | 1 cut(s) | 259 |
| HinP1I | GCGC | 1 cut(s) | 259 |
| HinfI | GANTC | 2 cut(s) | 275, 413 |
| Hpy188I | TCNGA | 1 cut(s) | 229 |
| Hpy188III | TCNNGA | 1 cut(s) | 22 |
| HpyAV | CCTTC | 1 cut(s) | 182 |
| HpyCH4V | TGCA | 3 cut(s) | 164, 303, 314 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 265 |
| HpyF3I | CTNAG | 1 cut(s) | 283 |
| Hsp92II | CATG | 2 cut(s) | 113, 173 |
| HspAI | GCGC | 1 cut(s) | 259 |
| Ksp22I | TGATCA | 1 cut(s) | 3 |
| Kzo9I | GATC | 2 cut(s) | 3, 229 |
| LmnI | GCTCC | 1 cut(s) | 398 |
| LpnPI | CCDG | 4 cut(s) | 7, 15, 117, 332 |
| Lsp1109I | GCAGC | 1 cut(s) | 148 |
| LweI | GCATC | 1 cut(s) | 301 |
| MalI | GATC | 2 cut(s) | 5, 231 |
| MboI | GATC | 2 cut(s) | 3, 229 |
| MboII | GAAGA | 1 cut(s) | 197 |
| MluCI | AATT | 3 cut(s) | 17, 25, 223 |
| MlyI | GAGTC | 1 cut(s) | 284 |
| MmeI | TCCRAC | 2 cut(s) | 199, 303 |
| MnlI | CCTC | 2 cut(s) | 366, 407 |
| MseI | TTAA | 4 cut(s) | 180, 243, 294, 401 |
| MslI | CAYNNNNRTG | 1 cut(s) | 135 |
| MspCI | CTTAAG | 2 cut(s) | 179, 242 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 265 |
| NdeII | GATC | 2 cut(s) | 3, 229 |
| NlaIII | CATG | 2 cut(s) | 113, 173 |
| NspI | RCATGY | 1 cut(s) | 173 |
| PciI | ACATGT | 1 cut(s) | 169 |
| PfeI | GAWTC | 1 cut(s) | 413 |
| PkrI | GCNGC | 1 cut(s) | 163 |
| PleI | GAGTC | 1 cut(s) | 283 |
| PpsI | GAGTC | 1 cut(s) | 283 |
| PscI | ACATGT | 1 cut(s) | 169 |
| PsiI | TTATAA | 1 cut(s) | 347 |
| RseI | CAYNNNNRTG | 1 cut(s) | 135 |
| SaqAI | TTAA | 4 cut(s) | 180, 243, 294, 401 |
| SatI | GCNGC | 1 cut(s) | 162 |
| Sau3AI | GATC | 2 cut(s) | 3, 229 |
| SchI | GAGTC | 1 cut(s) | 284 |
| SetI | ASST | 4 cut(s) | 34, 249, 289, 345 |
| SfaNI | GCATC | 1 cut(s) | 301 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 135 |
| SmlI | CTYRAG | 2 cut(s) | 179, 242 |
| SmoI | CTYRAG | 2 cut(s) | 179, 242 |
| Sse9I | AATT | 3 cut(s) | 17, 25, 223 |
| StyI | CCWWGG | 1 cut(s) | 306 |
| TaqI | TCGA | 1 cut(s) | 411 |
| TasI | AATT | 3 cut(s) | 17, 25, 223 |
| TfiI | GAWTC | 1 cut(s) | 413 |
| Tru1I | TTAA | 4 cut(s) | 180, 243, 294, 401 |
| Tru9I | TTAA | 4 cut(s) | 180, 243, 294, 401 |
| TscAI | CASTG | 1 cut(s) | 241 |
| TseI | GCWGC | 1 cut(s) | 161 |
| TspDTI | ATGAA | 3 cut(s) | 69, 73, 113 |
| TspRI | CASTG | 1 cut(s) | 241 |
| Vha464I | CTTAAG | 2 cut(s) | 179, 242 |
| XapI | RAATTY | 3 cut(s) | 17, 25, 223 |
| XceI | RCATGY | 1 cut(s) | 173 |