Prupe.4G262500_v2.0.a1

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0004992
Physical Location & Seq
Reverse (-)
19097350 .. 19101902
4553 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G262500.2

Sequence Viewer

Length: 1203 bp
ATGCTACTTTACTTGTTCATTACTTGCCTCTCCTTTCTCTTTTTCAAGACTCTTCCTCTCAAGCCTCTCCCACCATGGGCTTGTGAGATGCGCTTGTTGTCCCCCTGGTTTTGGAAAGAATTATCATTCTTTACCATATCCAAGTTGACAAAGAAGAGCTTTTCAATTTTCTTTCTTTCTCCATTTCCTTCCAAAATGTCCCTCAAGAGGAAGCCTCTGTCTCTTTCTGCTAAAGTTGAGAATGTTGAAGAAGAAGACACATCAGAGCTGTCTGTGTTGGACTTGCCAGAACTGGTCTTGGAATGCATACTCGAGAGGCTTCCTCCCGACGCGCTTTTTCGAATGACGGGGGTTTGTACTTCTTTGAGGGAGAGATGCAGGAGCGATCACCTTTGGGAGAAGCACATGAAACAGAAATGGGGCAGTGTTATTGGCCCTGCTGCCTACAGGGAGTGGCAGTGGCATATTGCTTCCAAAACCGATTTGGTTGATGTCAAGCAGGGCAAGCAAAAGGGTCTCATGAGAATTCTATCTCTTGGTTGGCCTTTCTCATGGATTAGATCCAGGGTTGATGATCATAGCCAGCAGAGGTGTTCTTTGCCAGCTGATTCCGTCATGTCTTGGTACCTTGCTCTTGAGACTGGCAGGTTCTGGTTCCCAGCTCAAGTATATAACCGCGAGAATGGACATGTTGGATTTATGTTGTCATGCTATGATGCTGAAATTAGCTATGATCCTCGCACTGACACCTTCCAAGCCAGGTACCCACCACATGGAAGGCGAGCAGTTGCAATTGAAAACGGTGTGCCTTGGGAAAGGCTTAGAGCACCACCAATCGAGACTCCCGCTCATGATCTTCATATGTCTGACTGTTTGAATGAGTTACAGCCTGGTGATCATATTGAGATACAGTGGAGAAGAAACAAAGAATTTCCTTATGGTTGGTGGTATGGTGTTGTGGGTCACCTAGAATCATGTGATGGACATGAAAATTACTGCCTTTGTCATAATAGTGACACTGTGGTGCTGGAGTTCAACCAGTACACGCATGGATCACGGTGGAGATGCACAAACATCAGCAGAAGAGACCATCGAGAGGAGGGAAATGAGGCAGATGGGTTTTACGGGGGCATAAGGAAGCTTAGAACCAAGGAAGAGATTTCCACATGGAAGAGACTTTGGCCAACTGAAGTCTTGGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

401

Amino Acids

47.01

Weight (kDa)

7.21

Isoelectric Point (pI)

60.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 636
Acc65I GGTACC 2 cut(s) 624, 762
AccB1I GGYRCC 2 cut(s) 624, 762
AccB7I CCANNNNNTGG 1 cut(s) 773
AccBSI CCGCTC 1 cut(s) 848
AccII CGCG 2 cut(s) 332, 678
AciI CCGC 2 cut(s) 676, 846
AclWI GGATC 3 cut(s) 555, 728, 1060
AcoI YGGCCR 1 cut(s) 1181
AcsI RAATTY 2 cut(s) 525, 929
AfaI GTAC 4 cut(s) 358, 626, 764, 1043
AfiI CCNNNNNNNGG 5 cut(s) 76, 111, 207, 773, 1096
AflIII ACRYGT 1 cut(s) 688
AgsI TTSAA 6 cut(s) 46, 165, 248, 797, 877, 1036
AjnI CCWGG 4 cut(s) 104, 563, 758, 889
AleI CACNNNNGTG 1 cut(s) 1022
AluBI AGCT 6 cut(s) 159, 268, 605, 662, 729, 1141
AluI AGCT 6 cut(s) 159, 268, 605, 662, 729, 1141
Alw21I GWGCWC 1 cut(s) 829
Alw26I GTCTC 6 cut(s) 225, 521, 632, 833, 1080, 1168
AlwI GGATC 3 cut(s) 555, 728, 1060
AlwNI CAGNNNCTG 1 cut(s) 651
Ama87I CYCGRG 1 cut(s) 311
AoxI GGCC 3 cut(s) 433, 542, 1181
ApeKI GCWGC 1 cut(s) 440
ApoI RAATTY 2 cut(s) 525, 929
Asp718I GGTACC 2 cut(s) 624, 762
AspLEI GCGC 2 cut(s) 93, 334
AspS9I GGNCC 1 cut(s) 434
AsuHPI GGTGA 3 cut(s) 380, 905, 956
AsuII TTCGAA 1 cut(s) 340
AvaI CYCGRG 1 cut(s) 311
BalI TGGCCA 1 cut(s) 1183
BanI GGYRCC 2 cut(s) 624, 762
BbsI GAAGAC 1 cut(s) 261
Bbv12I GWGCWC 1 cut(s) 829
BbvI GCAGC 1 cut(s) 427
BccI CCATC 3 cut(s) 974, 1098, 1109
BciT130I CCWGG 4 cut(s) 106, 565, 760, 891
BclI TGATCA 2 cut(s) 574, 895
BcoDI GTCTC 6 cut(s) 225, 521, 632, 833, 1080, 1168
BfaI CTAG 1 cut(s) 968
BfmI CTRYAG 1 cut(s) 445
BfuAI ACCTGC 1 cut(s) 636
BisI GCNGC 1 cut(s) 441
BlsI GCNGC 1 cut(s) 442
Bme1390I CCNGG 4 cut(s) 106, 565, 760, 891
BmeT110I CYCGRG 1 cut(s) 311
BmgT120I GGNCC 1 cut(s) 434
BmiI GGNNCC 3 cut(s) 626, 656, 764
BmrFI CCNGG 4 cut(s) 106, 565, 760, 891
BmsI GCATC 4 cut(s) 78, 365, 706, 1055
BpiI GAAGAC 1 cut(s) 261
BplI GAGNNNNNCTC 4 cut(s) 199, 231, 307, 339
BpmI CTGGAG 1 cut(s) 1049
Bpu14I TTCGAA 1 cut(s) 340
BpuEI CTTGAG 4 cut(s) 44, 188, 648, 656
BsaI GGTCTC 2 cut(s) 521, 1080
BsaJI CCNNGG 5 cut(s) 74, 104, 564, 809, 1149
BsaXI ACNNNNNCTCC 2 cut(s) 443, 473
Bsc4I CCNNNNNNNGG 5 cut(s) 76, 111, 207, 773, 1096
Bse1I ACTGG 3 cut(s) 297, 646, 1039
BseBI CCWGG 4 cut(s) 106, 565, 760, 891
BseDI CCNNGG 5 cut(s) 74, 104, 564, 809, 1149
BseLI CCNNNNNNNGG 5 cut(s) 76, 111, 207, 773, 1096
BseNI ACTGG 3 cut(s) 297, 646, 1039
BseRI GAGGAG 1 cut(s) 1112
BseXI GCAGC 1 cut(s) 427
BseYI CCCAGC 1 cut(s) 658
Bsh1236I CGCG 2 cut(s) 332, 678
BshFI GGCC 3 cut(s) 435, 544, 1183
BshNI GGYRCC 2 cut(s) 624, 762
BsiHKAI GWGCWC 1 cut(s) 829
BsiHKCI CYCGRG 1 cut(s) 311
BslFI GGGAC 2 cut(s) 85, 184
BslI CCNNNNNNNGG 5 cut(s) 76, 111, 207, 773, 1096
BsmAI GTCTC 6 cut(s) 225, 521, 632, 833, 1080, 1168
BsmFI GGGAC 2 cut(s) 85, 184
BsmI GAATGC 1 cut(s) 308
BsnI GGCC 3 cut(s) 435, 544, 1183
Bso31I GGTCTC 2 cut(s) 521, 1080
BsoBI CYCGRG 1 cut(s) 311
Bsp119I TTCGAA 1 cut(s) 340
Bsp1286I GDGCHC 1 cut(s) 829
Bsp143I GATC 7 cut(s) 385, 560, 574, 733, 853, 895, 1052
Bsp19I CCATGG 1 cut(s) 74
BspACI CCGC 2 cut(s) 676, 846
BspANI GGCC 3 cut(s) 435, 544, 1183
BspFNI CGCG 2 cut(s) 332, 678
BspHI TCATGA 2 cut(s) 519, 850
BspLI GGNNCC 3 cut(s) 626, 656, 764
BspMI ACCTGC 1 cut(s) 636
BspPI GGATC 3 cut(s) 555, 728, 1060
BspQI GCTCTTC 1 cut(s) 149
BspT104I TTCGAA 1 cut(s) 340
BspT107I GGYRCC 2 cut(s) 624, 762
BspTNI GGTCTC 2 cut(s) 521, 1080
BsrBI CCGCTC 1 cut(s) 848
BsrI ACTGG 3 cut(s) 297, 646, 1039
BssECI CCNNGG 5 cut(s) 74, 104, 564, 809, 1149
BssMI GATC 7 cut(s) 385, 560, 574, 733, 853, 895, 1052
BssT1I CCWWGG 3 cut(s) 74, 809, 1149
Bst2UI CCWGG 4 cut(s) 106, 565, 760, 891
Bst4CI ACNGT 5 cut(s) 803, 872, 912, 1021, 1059
Bst6I CTCTTC 5 cut(s) 57, 149, 1078, 1149, 1166
BstBI TTCGAA 1 cut(s) 340
BstC8I GCNNGC 4 cut(s) 506, 584, 603, 783
BstDEI CTNAG 2 cut(s) 821, 1142
BstDSI CCRYGG 1 cut(s) 74
BstEII GGTNACC 1 cut(s) 962
BstFNI CGCG 2 cut(s) 332, 678
BstHHI GCGC 2 cut(s) 93, 334
BstKTI GATC 7 cut(s) 388, 563, 577, 736, 856, 898, 1055
BstMAI GTCTC 6 cut(s) 225, 521, 632, 833, 1080, 1168
BstMBI GATC 7 cut(s) 385, 560, 574, 733, 853, 895, 1052
BstMWI GCNNNNNNNGC 1 cut(s) 505
BstNI CCWGG 4 cut(s) 106, 565, 760, 891
BstNSI RCATGY 1 cut(s) 692
BstPI GGTNACC 1 cut(s) 962
BstSCI CCNGG 4 cut(s) 104, 563, 758, 889
BstSFI CTRYAG 1 cut(s) 445
BstUI CGCG 2 cut(s) 332, 678
BstV1I GCAGC 1 cut(s) 427
BstV2I GAAGAC 1 cut(s) 261
BstX2I RGATCY 1 cut(s) 560
BstYI RGATCY 1 cut(s) 560
BsuRI GGCC 3 cut(s) 435, 544, 1183
BtgI CCRYGG 1 cut(s) 74
BtsI GCAGTG 2 cut(s) 430, 464
BtsIMutI CAGTG 5 cut(s) 430, 464, 741, 917, 1017
BveI ACCTGC 1 cut(s) 636
Cac8I GCNNGC 4 cut(s) 506, 584, 603, 783
CaiI CAGNNNCTG 1 cut(s) 651
CciI TCATGA 2 cut(s) 519, 850
CfoI GCGC 2 cut(s) 93, 334
Cfr13I GGNCC 1 cut(s) 434
CseI GACGC 1 cut(s) 338
Csp6I GTAC 4 cut(s) 357, 625, 763, 1042
CviQI GTAC 4 cut(s) 357, 625, 763, 1042
DdeI CTNAG 2 cut(s) 821, 1142
DpnI GATC 7 cut(s) 387, 562, 576, 735, 855, 897, 1054
DpnII GATC 7 cut(s) 385, 560, 574, 733, 853, 895, 1052
EaeI YGGCCR 1 cut(s) 1181
Eam1104I CTCTTC 5 cut(s) 57, 149, 1078, 1149, 1166
EarI CTCTTC 5 cut(s) 57, 149, 1078, 1149, 1166
Eco130I CCWWGG 3 cut(s) 74, 809, 1149
Eco31I GGTCTC 2 cut(s) 521, 1080
Eco88I CYCGRG 1 cut(s) 311
Eco91I GGTNACC 1 cut(s) 962
EcoO65I GGTNACC 1 cut(s) 962
EcoRI GAATTC 1 cut(s) 525
EcoRII CCWGG 4 cut(s) 104, 563, 758, 889
EcoT14I CCWWGG 3 cut(s) 74, 809, 1149
EcoT22I ATGCAT 1 cut(s) 308
ErhI CCWWGG 3 cut(s) 74, 809, 1149
FalI AAGNNNNNCTT 2 cut(s) 143, 175
FaqI GGGAC 2 cut(s) 85, 184
FauI CCCGC 1 cut(s) 853
FauNDI CATATG 1 cut(s) 861
FbaI TGATCA 2 cut(s) 574, 895
Fnu4HI GCNGC 1 cut(s) 441
Fsp4HI GCNGC 1 cut(s) 441
FspBI CTAG 1 cut(s) 968
GlaI GCGC 2 cut(s) 92, 333
GluI GCNGC 1 cut(s) 441
GsaI CCCAGC 1 cut(s) 662
GsuI CTGGAG 1 cut(s) 1049
HaeIII GGCC 3 cut(s) 435, 544, 1183
HgaI GACGC 1 cut(s) 338
HhaI GCGC 2 cut(s) 93, 334
Hin6I GCGC 2 cut(s) 91, 332
HinP1I GCGC 2 cut(s) 91, 332
HincII GTYRAC 1 cut(s) 147
HindII GTYRAC 1 cut(s) 147
HindIII AAGCTT 1 cut(s) 1139
HinfI GANTC 4 cut(s) 49, 608, 841, 971
HphI GGTGA 3 cut(s) 380, 905, 956
Hpy166II GTNNAC 2 cut(s) 147, 1044
Hpy188I TCNGA 2 cut(s) 265, 868
Hpy188III TCNNGA 9 cut(s) 46, 205, 313, 326, 520, 635, 838, 851, 1094
Hpy8I GTNNAC 2 cut(s) 147, 1044
Hpy99I CGWCG 1 cut(s) 332
HpyAV CCTTC 3 cut(s) 198, 760, 771
HpyCH4III ACNGT 5 cut(s) 803, 872, 912, 1021, 1059
HpyCH4V TGCA 4 cut(s) 306, 378, 791, 1068
HpyF10VI GCNNNNNNNGC 1 cut(s) 505
HpyF3I CTNAG 2 cut(s) 821, 1142
HspAI GCGC 2 cut(s) 91, 332
KpnI GGTACC 2 cut(s) 628, 766
Ksp22I TGATCA 2 cut(s) 574, 895
Kzo9I GATC 7 cut(s) 385, 560, 574, 733, 853, 895, 1052
LguI GCTCTTC 1 cut(s) 149
LmnI GCTCC 1 cut(s) 381
Lsp1109I GCAGC 1 cut(s) 427
LweI GCATC 4 cut(s) 78, 365, 706, 1055
MaeI CTAG 1 cut(s) 968
MaeIII GTNAC 3 cut(s) 882, 962, 1013
MalI GATC 7 cut(s) 387, 562, 576, 735, 855, 897, 1054
MbiI CCGCTC 1 cut(s) 848
MboI GATC 7 cut(s) 385, 560, 574, 733, 853, 895, 1052
MfeI CAATTG 1 cut(s) 792
MflI RGATCY 1 cut(s) 560
MhlI GDGCHC 1 cut(s) 829
MlsI TGGCCA 1 cut(s) 1183
MluCI AATT 7 cut(s) 119, 165, 525, 723, 792, 929, 991
MluNI TGGCCA 1 cut(s) 1183
MlyI GAGTC 2 cut(s) 43, 835
MmeI TCCRAC 2 cut(s) 258, 673
Mox20I TGGCCA 1 cut(s) 1183
Mph1103I ATGCAT 1 cut(s) 308
MscI TGGCCA 1 cut(s) 1183
MslI CAYNNNNRTG 2 cut(s) 1011, 1022
Msp20I TGGCCA 1 cut(s) 1183
MspA1I CMGCKG 1 cut(s) 605
MspR9I CCNGG 4 cut(s) 106, 565, 760, 891
MunI CAATTG 1 cut(s) 792
Mva1269I GAATGC 1 cut(s) 308
MvaI CCWGG 4 cut(s) 106, 565, 760, 891
MvnI CGCG 2 cut(s) 332, 678
MwoI GCNNNNNNNGC 1 cut(s) 505
NcoI CCATGG 1 cut(s) 74
NdeI CATATG 1 cut(s) 861
NdeII GATC 7 cut(s) 385, 560, 574, 733, 853, 895, 1052
NlaIV GGNNCC 3 cut(s) 626, 656, 764
NmuCI GTSAC 2 cut(s) 962, 1013
NsiI ATGCAT 1 cut(s) 308
NspI RCATGY 1 cut(s) 692
NspV TTCGAA 1 cut(s) 340
OliI CACNNNNGTG 1 cut(s) 1022
PaeR7I CTCGAG 1 cut(s) 311
PagI TCATGA 2 cut(s) 519, 850
PciI ACATGT 1 cut(s) 688
PciSI GCTCTTC 1 cut(s) 149
PctI GAATGC 1 cut(s) 308
PfeI GAWTC 2 cut(s) 608, 971
PflMI CCANNNNNTGG 1 cut(s) 773
PkrI GCNGC 1 cut(s) 442
PleI GAGTC 2 cut(s) 43, 835
PpsI GAGTC 2 cut(s) 43, 835
PscI ACATGT 1 cut(s) 688
Psp6I CCWGG 4 cut(s) 104, 563, 758, 889
PspEI GGTNACC 1 cut(s) 962
PspFI CCCAGC 1 cut(s) 658
PspGI CCWGG 4 cut(s) 104, 563, 758, 889
PspN4I GGNNCC 3 cut(s) 626, 656, 764
PspPI GGNCC 1 cut(s) 434
PstNI CAGNNNCTG 1 cut(s) 651
PsuI RGATCY 1 cut(s) 560
PvuII CAGCTG 1 cut(s) 605
RsaI GTAC 4 cut(s) 358, 626, 764, 1043
RsaNI GTAC 4 cut(s) 357, 625, 763, 1042
RseI CAYNNNNRTG 2 cut(s) 1011, 1022
SapI GCTCTTC 1 cut(s) 149
SatI GCNGC 1 cut(s) 441
Sau3AI GATC 7 cut(s) 385, 560, 574, 733, 853, 895, 1052
Sau96I GGNCC 1 cut(s) 434
SchI GAGTC 2 cut(s) 43, 835
ScrFI CCNGG 4 cut(s) 106, 565, 760, 891
SduI GDGCHC 1 cut(s) 829
SfaNI GCATC 4 cut(s) 78, 365, 706, 1055
SfcI CTRYAG 1 cut(s) 445
Sfr274I CTCGAG 1 cut(s) 311
SfuI TTCGAA 1 cut(s) 340
SlaI CTCGAG 1 cut(s) 311
SmiMI CAYNNNNRTG 2 cut(s) 1011, 1022
SmlI CTYRAG 5 cut(s) 59, 203, 311, 635, 663
SmoI CTYRAG 5 cut(s) 59, 203, 311, 635, 663
Sse9I AATT 7 cut(s) 119, 165, 525, 723, 792, 929, 991
SsiI CCGC 2 cut(s) 676, 846
SspMI CTAG 1 cut(s) 968
StyD4I CCNGG 4 cut(s) 104, 563, 758, 889
StyI CCWWGG 3 cut(s) 74, 809, 1149
TaaI ACNGT 5 cut(s) 803, 872, 912, 1021, 1059
TaqI TCGA 4 cut(s) 312, 340, 837, 1093
TasI AATT 7 cut(s) 119, 165, 525, 723, 792, 929, 991
TatI WGTACW 2 cut(s) 356, 1041
TfiI GAWTC 2 cut(s) 608, 971
TscAI CASTG 5 cut(s) 430, 464, 748, 917, 1024
TseFI GTSAC 2 cut(s) 962, 1013
TseI GCWGC 1 cut(s) 440
Tsp45I GTSAC 2 cut(s) 962, 1013
TspDTI ATGAA 4 cut(s) 7, 422, 848, 1002
TspGWI ACGGA 1 cut(s) 601
TspRI CASTG 5 cut(s) 430, 464, 748, 917, 1024
Van91I CCANNNNNTGG 1 cut(s) 773
XapI RAATTY 2 cut(s) 525, 929
XceI RCATGY 1 cut(s) 692
XcmI CCANNNNNNNNNTGG 2 cut(s) 481, 1046
XhoI CTCGAG 1 cut(s) 311
XspI CTAG 1 cut(s) 968
Zsp2I ATGCAT 1 cut(s) 308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.