Rh5CG369300

f-box protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
47030419 .. 47032798
2380 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG369300.1

Sequence Viewer

Length: 1236 bp
ATGCTACTATACTTTTTCATTACTTGCCTCTCACTCCTCTTTTTCAAGAGTTTTCCTGTCAAATCTCTCCCACTCCCACCATGGGTTTTTGAGGTCCAATTATTGTTCTCCTCGAAAATCAAAAGCCTTGTTTCAATTGGTTTTCTTTCTCAAACTCATTCCGCAAGGTCTATGTCAATGTCCGTAGGAGTAGGGAGTAGGACAACTAGTATCGCAGAACACGATGATGAGATTAATACTGAACCACAGATGTGTGTGTTGGACTTGCCAGAATTGGTGTTGGAATGCATTCTGGAGAGGCTACCTGCTGAGTCCCTTTTCAGAATGAGAGGGGTTTGTACCTCTCTGAGGGAGAGATGTGTGAGTGACCACCTTTGGGAGAAGCACATGAAAAAGAAATGGGGCAGAGTAATTGGCCCTGCTGCTTATAGGGAGTGGCAGTGGCAATCCATGGCCAATCAAAAGCAGAGCCCGAATCAGAATCAGCTGGCCAAGCCGCAAAAAGCAGCAGGCAAAGGCCTAATGAGAATTCTATCACTGTCTCTTTCTTGGCCTTTGTCGTGGATTAGATCCTCCAGCGACCATGATGAATTTATCAAAAGCAGGAGGAGGACTTGCTTCCCGTCTCATCAGCGTGAGAATTCTGTCATGTCTTGGTACCTTGCTCTTGAGACCGGCAGGTTCTGGTTTCCTGCACAAGTCTATAACCGAGAGAATGGTCATGTTGGTTTTGTCTTGTCATGCTATGATGCTGAGCTTAGCTATGATCCCCGCACTGACACATTCCAAGCCAGATATCCACCACATGGAAGGAGAGCAGTTGCAGTTGAGAATTGTGTGCCCTGGGAAAGGCTTAGAGCACCACCTGTTGACACTTCGCCTCATGATCTTCATATCTCTGACTGTTTGAATGATTTGCGTCCTGGGGATCATATTGAGATTCAGTGGAGAAGAAATAAAGAATTTCCTTATGGTTGGTGGTATGGTGTTGTAGGTCACCTGGAATCATGTGATGGGAATGAGACTTACTGCCTTTGTCATAATAGTGACAATGTGGTGCTGGAGTTCAACCAGTACGCACGTGGTTCACGGTGGAGATGCACAACAATCAGCCGGAAAAACCATCGAGAAGAGGGAGACGAGGCAGATGGTTTCTACGGAGGAATCCGCAAGCTTTGCACCAAGGAAGAGATCTCCGTGTGGAAGTGTCTATGGCCAACTCAAGTCCTGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

411

Amino Acids

47.73

Weight (kDa)

8.13

Isoelectric Point (pI)

55.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 87 - 128 2.3e-08 F-box domain
F-box-like PF12937 87 - 128 4.4e-07 F-box-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 313, 669
Acc65I GGTACC 1 cut(s) 657
AccB1I GGYRCC 1 cut(s) 657
AccB7I CCANNNNNTGG 1 cut(s) 806
AciI CCGC 4 cut(s) 162, 497, 772, 1168
AclWI GGATC 3 cut(s) 564, 761, 936
AcoI YGGCCR 3 cut(s) 453, 489, 1214
AcsI RAATTY 4 cut(s) 528, 590, 640, 962
AcvI CACGTG 1 cut(s) 1082
AfaI GTAC 3 cut(s) 340, 659, 1076
AfiI CCNNNNNNNGG 5 cut(s) 82, 348, 376, 806, 849
AgsI TTSAA 4 cut(s) 46, 135, 910, 1069
AhlI ACTAGT 1 cut(s) 206
AjnI CCWGG 4 cut(s) 842, 922, 999, 1227
AleI CACNNNNGTG 1 cut(s) 250
AluBI AGCT 4 cut(s) 487, 757, 762, 1174
AluI AGCT 4 cut(s) 487, 757, 762, 1174
Alw21I GWGCWC 1 cut(s) 862
Alw26I GTCTC 5 cut(s) 546, 630, 665, 1016, 1131
AlwI GGATC 3 cut(s) 564, 761, 936
AlwNI CAGNNNCTG 1 cut(s) 684
AoxI GGCC 6 cut(s) 415, 453, 489, 517, 551, 1214
ApeKI GCWGC 2 cut(s) 422, 506
ApoI RAATTY 4 cut(s) 528, 590, 640, 962
AseI ATTAAT 1 cut(s) 234
Asp700I GAANNNNTTC 1 cut(s) 288
Asp718I GGTACC 1 cut(s) 657
AspS9I GGNCC 2 cut(s) 94, 416
AsuHPI GGTGA 1 cut(s) 989
AvaII GGWCC 1 cut(s) 94
BaeGI GKGCMC 1 cut(s) 843
BalI TGGCCA 3 cut(s) 455, 491, 1216
BanI GGYRCC 1 cut(s) 657
BanII GRGCYC 1 cut(s) 473
BbrPI CACGTG 1 cut(s) 1082
Bbv12I GWGCWC 1 cut(s) 862
BbvI GCAGC 2 cut(s) 409, 518
BccI CCATC 3 cut(s) 1007, 1131, 1142
BciT130I CCWGG 4 cut(s) 844, 924, 1001, 1229
BcoDI GTCTC 5 cut(s) 546, 630, 665, 1016, 1131
BcuI ACTAGT 1 cut(s) 206
BfaI CTAG 1 cut(s) 207
BfuAI ACCTGC 2 cut(s) 313, 669
BglII AGATCT 1 cut(s) 1191
BisI GCNGC 3 cut(s) 423, 497, 507
BlpI GCTNAGC 2 cut(s) 753, 758
BlsI GCNGC 3 cut(s) 424, 498, 508
Bme1390I CCNGG 4 cut(s) 844, 924, 1001, 1229
Bme18I GGWCC 1 cut(s) 94
BmgT120I GGNCC 2 cut(s) 94, 416
BmiI GGNNCC 1 cut(s) 659
BmrFI CCNGG 4 cut(s) 844, 924, 1001, 1229
BmsI GCATC 2 cut(s) 739, 1088
BpmI CTGGAG 3 cut(s) 314, 559, 1082
Bpu1102I GCTNAGC 2 cut(s) 753, 758
BpuEI CTTGAG 2 cut(s) 689, 1206
BsaAI YACGTR 1 cut(s) 1082
BsaI GGTCTC 1 cut(s) 665
BsaJI CCNNGG 6 cut(s) 80, 450, 842, 843, 923, 1182
BsaXI ACNNNNNCTCC 2 cut(s) 425, 455
Bsc4I CCNNNNNNNGG 5 cut(s) 82, 348, 376, 806, 849
Bse118I RCCGGY 1 cut(s) 674
Bse1I ACTGG 1 cut(s) 1072
BseBI CCWGG 4 cut(s) 844, 924, 1001, 1229
BseDI CCNNGG 6 cut(s) 80, 450, 842, 843, 923, 1182
BseLI CCNNNNNNNGG 5 cut(s) 82, 348, 376, 806, 849
BseMII CTCAG 3 cut(s) 300, 338, 744
BseNI ACTGG 1 cut(s) 1072
BseRI GAGGAG 3 cut(s) 26, 100, 622
BseSI GKGCMC 1 cut(s) 843
BseXI GCAGC 2 cut(s) 409, 518
BsgI GTGCAG 1 cut(s) 678
BshFI GGCC 6 cut(s) 417, 455, 491, 519, 553, 1216
BshNI GGYRCC 1 cut(s) 657
BsiHKAI GWGCWC 1 cut(s) 862
BsiSI CCGG 2 cut(s) 675, 1114
BslFI GGGAC 1 cut(s) 298
BslI CCNNNNNNNGG 5 cut(s) 82, 348, 376, 806, 849
BsmAI GTCTC 5 cut(s) 546, 630, 665, 1016, 1131
BsmBI CGTCTC 2 cut(s) 630, 1131
BsmFI GGGAC 1 cut(s) 298
BsmI GAATGC 2 cut(s) 288, 290
BsnI GGCC 6 cut(s) 417, 455, 491, 519, 553, 1216
Bso31I GGTCTC 1 cut(s) 665
Bsp1286I GDGCHC 3 cut(s) 473, 843, 862
Bsp143I GATC 5 cut(s) 569, 766, 886, 928, 1191
Bsp1720I GCTNAGC 2 cut(s) 753, 758
Bsp19I CCATGG 2 cut(s) 80, 450
BspACI CCGC 4 cut(s) 162, 497, 772, 1168
BspANI GGCC 6 cut(s) 417, 455, 491, 519, 553, 1216
BspCNI CTCAG 3 cut(s) 301, 339, 745
BspHI TCATGA 1 cut(s) 883
BspLI GGNNCC 1 cut(s) 659
BspMI ACCTGC 2 cut(s) 313, 669
BspPI GGATC 3 cut(s) 564, 761, 936
BspT107I GGYRCC 1 cut(s) 657
BspTNI GGTCTC 1 cut(s) 665
BsrFI RCCGGY 1 cut(s) 674
BsrI ACTGG 1 cut(s) 1072
BssAI RCCGGY 1 cut(s) 674
BssECI CCNNGG 6 cut(s) 80, 450, 842, 843, 923, 1182
BssMI GATC 5 cut(s) 569, 766, 886, 928, 1191
BssT1I CCWWGG 3 cut(s) 80, 450, 1182
Bst2UI CCWGG 4 cut(s) 844, 924, 1001, 1229
Bst4CI ACNGT 3 cut(s) 540, 905, 1092
Bst6I CTCTTC 2 cut(s) 1125, 1182
BstAPI GCANNNNNTGC 1 cut(s) 1176
BstBAI YACGTR 1 cut(s) 1082
BstC8I GCNNGC 3 cut(s) 489, 511, 1172
BstDEI CTNAG 5 cut(s) 309, 347, 753, 758, 854
BstDSI CCRYGG 2 cut(s) 80, 450
BstEII GGTNACC 1 cut(s) 995
BstENI CCTNNNNNAGG 2 cut(s) 346, 847
BstKTI GATC 5 cut(s) 572, 769, 889, 931, 1194
BstMAI GTCTC 5 cut(s) 546, 630, 665, 1016, 1131
BstMBI GATC 5 cut(s) 569, 766, 886, 928, 1191
BstMWI GCNNNNNNNGC 2 cut(s) 493, 1176
BstNI CCWGG 4 cut(s) 844, 924, 1001, 1229
BstPI GGTNACC 1 cut(s) 995
BstSCI CCNGG 4 cut(s) 842, 922, 999, 1227
BstSLI GKGCMC 1 cut(s) 843
BstV1I GCAGC 2 cut(s) 409, 518
BstX2I RGATCY 2 cut(s) 569, 1191
BstYI RGATCY 2 cut(s) 569, 1191
BsuRI GGCC 6 cut(s) 417, 455, 491, 519, 553, 1216
BtgI CCRYGG 2 cut(s) 80, 450
BtsI GCAGTG 1 cut(s) 446
BtsIMutI CAGTG 4 cut(s) 446, 536, 774, 950
BveI ACCTGC 2 cut(s) 313, 669
Cac8I GCNNGC 3 cut(s) 489, 511, 1172
CaiI CAGNNNCTG 1 cut(s) 684
CciI TCATGA 1 cut(s) 883
Cfr10I RCCGGY 1 cut(s) 674
Cfr13I GGNCC 2 cut(s) 94, 416
CseI GACGC 1 cut(s) 908
Csp6I GTAC 3 cut(s) 339, 658, 1075
CviQI GTAC 3 cut(s) 339, 658, 1075
DdeI CTNAG 5 cut(s) 309, 347, 753, 758, 854
DpnI GATC 5 cut(s) 571, 768, 888, 930, 1193
DpnII GATC 5 cut(s) 569, 766, 886, 928, 1191
EaeI YGGCCR 3 cut(s) 453, 489, 1214
Eam1104I CTCTTC 2 cut(s) 1125, 1182
EarI CTCTTC 2 cut(s) 1125, 1182
Eco130I CCWWGG 3 cut(s) 80, 450, 1182
Eco147I AGGCCT 1 cut(s) 519
Eco24I GRGCYC 1 cut(s) 473
Eco31I GGTCTC 1 cut(s) 665
Eco32I GATATC 1 cut(s) 797
Eco47I GGWCC 1 cut(s) 94
Eco72I CACGTG 1 cut(s) 1082
Eco91I GGTNACC 1 cut(s) 995
EcoNI CCTNNNNNAGG 2 cut(s) 346, 847
EcoO65I GGTNACC 1 cut(s) 995
EcoRI GAATTC 2 cut(s) 528, 640
EcoRII CCWGG 4 cut(s) 842, 922, 999, 1227
EcoRV GATATC 1 cut(s) 797
EcoT14I CCWWGG 3 cut(s) 80, 450, 1182
EcoT22I ATGCAT 1 cut(s) 290
EcoT38I GRGCYC 1 cut(s) 473
ErhI CCWWGG 3 cut(s) 80, 450, 1182
Esp3I CGTCTC 2 cut(s) 630, 1131
FaqI GGGAC 1 cut(s) 298
FauI CCCGC 1 cut(s) 779
Fnu4HI GCNGC 3 cut(s) 423, 497, 507
FriOI GRGCYC 1 cut(s) 473
Fsp4HI GCNGC 3 cut(s) 423, 497, 507
FspBI CTAG 1 cut(s) 207
GluI GCNGC 3 cut(s) 423, 497, 507
GsuI CTGGAG 3 cut(s) 314, 559, 1082
HaeIII GGCC 6 cut(s) 417, 455, 491, 519, 553, 1216
HapII CCGG 2 cut(s) 675, 1114
HgaI GACGC 1 cut(s) 908
HincII GTYRAC 1 cut(s) 871
HindII GTYRAC 1 cut(s) 871
HindIII AAGCTT 1 cut(s) 1172
HinfI GANTC 6 cut(s) 311, 475, 481, 940, 1004, 1164
HpaII CCGG 2 cut(s) 675, 1114
HphI GGTGA 1 cut(s) 989
Hpy166II GTNNAC 2 cut(s) 871, 1088
Hpy188I TCNGA 4 cut(s) 323, 348, 480, 901
Hpy188III TCNNGA 5 cut(s) 46, 293, 668, 884, 1127
Hpy8I GTNNAC 2 cut(s) 871, 1088
HpyAV CCTTC 1 cut(s) 804
HpyCH4III ACNGT 3 cut(s) 540, 905, 1092
HpyCH4IV ACGT 1 cut(s) 1081
HpyCH4V TGCA 5 cut(s) 288, 695, 824, 1101, 1179
HpyF10VI GCNNNNNNNGC 2 cut(s) 493, 1176
HpyF3I CTNAG 5 cut(s) 309, 347, 753, 758, 854
HpySE526I ACGT 1 cut(s) 1081
KpnI GGTACC 1 cut(s) 661
Kzo9I GATC 5 cut(s) 569, 766, 886, 928, 1191
Lsp1109I GCAGC 2 cut(s) 409, 518
LweI GCATC 2 cut(s) 739, 1088
MaeI CTAG 1 cut(s) 207
MaeII ACGT 1 cut(s) 1081
MaeIII GTNAC 3 cut(s) 365, 995, 1046
MalI GATC 5 cut(s) 571, 768, 888, 930, 1193
MboI GATC 5 cut(s) 569, 766, 886, 928, 1191
MboII GAAGA 4 cut(s) 881, 963, 1142, 1199
MfeI CAATTG 1 cut(s) 135
MflI RGATCY 2 cut(s) 569, 1191
MhlI GDGCHC 3 cut(s) 473, 843, 862
MlsI TGGCCA 3 cut(s) 455, 491, 1216
MluCI AATT 9 cut(s) 98, 135, 272, 411, 528, 590, 640, 832, 962
MluNI TGGCCA 3 cut(s) 455, 491, 1216
MlyI GAGTC 1 cut(s) 320
MmeI TCCRAC 2 cut(s) 240, 261
Mox20I TGGCCA 3 cut(s) 455, 491, 1216
Mph1103I ATGCAT 1 cut(s) 290
MroXI GAANNNNTTC 1 cut(s) 288
MscI TGGCCA 3 cut(s) 455, 491, 1216
MseI TTAA 1 cut(s) 234
MslI CAYNNNNRTG 4 cut(s) 225, 250, 633, 1044
Msp20I TGGCCA 3 cut(s) 455, 491, 1216
MspA1I CMGCKG 1 cut(s) 487
MspI CCGG 2 cut(s) 675, 1114
MspR9I CCNGG 4 cut(s) 844, 924, 1001, 1229
MunI CAATTG 1 cut(s) 135
Mva1269I GAATGC 2 cut(s) 288, 290
MvaI CCWGG 4 cut(s) 844, 924, 1001, 1229
MwoI GCNNNNNNNGC 2 cut(s) 493, 1176
NcoI CCATGG 2 cut(s) 80, 450
NdeII GATC 5 cut(s) 569, 766, 886, 928, 1191
NlaIV GGNNCC 1 cut(s) 659
NmuCI GTSAC 3 cut(s) 365, 995, 1046
NsiI ATGCAT 1 cut(s) 290
OliI CACNNNNGTG 1 cut(s) 250
PagI TCATGA 1 cut(s) 883
PasI CCCWGGG 1 cut(s) 843
PceI AGGCCT 1 cut(s) 519
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PctI GAATGC 2 cut(s) 288, 290
PdmI GAANNNNTTC 1 cut(s) 288
PfeI GAWTC 5 cut(s) 475, 481, 940, 1004, 1164
PflMI CCANNNNNTGG 1 cut(s) 806
PfoI TCCNGGA 1 cut(s) 1227
PkrI GCNGC 3 cut(s) 424, 498, 508
PleI GAGTC 1 cut(s) 319
PmaCI CACGTG 1 cut(s) 1082
PmlI CACGTG 1 cut(s) 1082
PpsI GAGTC 1 cut(s) 319
Ppu21I YACGTR 1 cut(s) 1082
PshBI ATTAAT 1 cut(s) 234
Psp6I CCWGG 4 cut(s) 842, 922, 999, 1227
PspCI CACGTG 1 cut(s) 1082
PspEI GGTNACC 1 cut(s) 995
PspGI CCWGG 4 cut(s) 842, 922, 999, 1227
PspN4I GGNNCC 1 cut(s) 659
PspPI GGNCC 2 cut(s) 94, 416
PstNI CAGNNNCTG 1 cut(s) 684
PsuI RGATCY 2 cut(s) 569, 1191
PvuII CAGCTG 1 cut(s) 487
RsaI GTAC 3 cut(s) 340, 659, 1076
RsaNI GTAC 3 cut(s) 339, 658, 1075
RseI CAYNNNNRTG 4 cut(s) 225, 250, 633, 1044
SaqAI TTAA 1 cut(s) 234
SatI GCNGC 3 cut(s) 423, 497, 507
Sau3AI GATC 5 cut(s) 569, 766, 886, 928, 1191
Sau96I GGNCC 2 cut(s) 94, 416
SchI GAGTC 1 cut(s) 320
ScrFI CCNGG 4 cut(s) 844, 924, 1001, 1229
SduI GDGCHC 3 cut(s) 473, 843, 862
SfaNI GCATC 2 cut(s) 739, 1088
SinI GGWCC 1 cut(s) 94
SmiMI CAYNNNNRTG 4 cut(s) 225, 250, 633, 1044
SmlI CTYRAG 2 cut(s) 668, 1221
SmoI CTYRAG 2 cut(s) 668, 1221
SpeI ACTAGT 1 cut(s) 206
Sse9I AATT 9 cut(s) 98, 135, 272, 411, 528, 590, 640, 832, 962
SseBI AGGCCT 1 cut(s) 519
SsiI CCGC 4 cut(s) 162, 497, 772, 1168
SspMI CTAG 1 cut(s) 207
StuI AGGCCT 1 cut(s) 519
StyD4I CCNGG 4 cut(s) 842, 922, 999, 1227
StyI CCWWGG 3 cut(s) 80, 450, 1182
TaaI ACNGT 3 cut(s) 540, 905, 1092
TaiI ACGT 1 cut(s) 1084
TaqI TCGA 2 cut(s) 113, 1126
TasI AATT 9 cut(s) 98, 135, 272, 411, 528, 590, 640, 832, 962
TauI GCSGC 1 cut(s) 499
TfiI GAWTC 5 cut(s) 475, 481, 940, 1004, 1164
Tru1I TTAA 1 cut(s) 234
Tru9I TTAA 1 cut(s) 234
TscAI CASTG 4 cut(s) 446, 543, 781, 950
TseFI GTSAC 3 cut(s) 365, 995, 1046
TseI GCWGC 2 cut(s) 422, 506
Tsp45I GTSAC 3 cut(s) 365, 995, 1046
TspDTI ATGAA 4 cut(s) 7, 404, 603, 881
TspGWI ACGGA 3 cut(s) 172, 1173, 1186
TspRI CASTG 4 cut(s) 446, 543, 781, 950
Van91I CCANNNNNTGG 1 cut(s) 806
VpaK11BI GGWCC 1 cut(s) 94
VspI ATTAAT 1 cut(s) 234
XagI CCTNNNNNAGG 2 cut(s) 346, 847
XapI RAATTY 4 cut(s) 528, 590, 640, 962
XcmI CCANNNNNNNNNTGG 2 cut(s) 78, 1079
XmnI GAANNNNTTC 1 cut(s) 288
XspI CTAG 1 cut(s) 207
Zsp2I ATGCAT 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.