Prupe.4G267200_v2.0.a1

Protein LATERAL ROOT PRIMORDIUM

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0009808
Physical Location & Seq
Forward (+)
20095612 .. 20098428
2817 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G267200.1

Sequence Viewer

Length: 1278 bp
ATGTGGCCCTCCTCCGGCCCTCCCAGCAGGCCTCTCCCCTACAGCCACCTCCCTCCCGAGATGGCCGGCATGGTCGGCCTCAGAGACGTCTTCGTCGTGGCCCCGGCCGCCGCCTACCACCACAACAACCATCACCACCTCCACCACCACCACCACGATCCCAATCTCCTCTCCCCCTCCTCCGACCCACACCATTCCATCAACGCCTCCACCAACCCCGCCACCGCTCTCGGTGTTGGGGTTGGCGTCGGCGTCATCCCTCTCCTCACCACCACCCCTTGTCTTGCCCCGCCAAATATCTCAAATGTCGACGATGACGAAGATAATAATGCCCACACTCCTACAGGTATGAGCATGGGCATGGGCATGGGTATGGGTATGGGAATGGGTATGAGTATGAGCATGGGTATGATGAGCAGCGGCCAGCATCGAAACAACCGAAGCGCGGGAGGAGGAGGAGGAATTCAGCTGTGGCAGCAGCCCCAGCCCCACTTCTTCAAGAAAACTCCACATGATCTGGCTGCTACGAGTCTCGGCGGGACCCACTTGGTTCAAGGTGGTGGCGGCGGAGTAGGAAACAACGTTATGAATTCCGGCTCTGCCGCTGCCTCCGGGGCGTCGACAATGACGTGTCAAGATTGTGGGAACCAGGCGAAGAAAGACTGCACGCACAGGCGGTGCAGGACGTGCTGCAAAAGCCGGGGGTTCGACTGTGCTACTCACGTGAAGAGCACATGGGTCCCGGCAGCTCGGCGGAGAGAGCGGCAGCTGATGTCTGGTGCGGCTGGAGGTGGGGCTGGGTCTAATTCTGGGTCTACATCCAGTGCCAAGAAGCCTAGGCTCATTGGCGCCTCCCAAACGACAACGTCTCATACTTCCACTTCAAACACCACCCCCCCTAGAAGCTATGATACTAGCTCTAGTCACCAAGATGCTGGTTTCAAGGAGTCATTGCCGGGCCAAGTACGTGCTCCGGCAGTGTTCAAGTGCGTTCGGGTGACCGCGGTGGAAGACGGCGACGATGAGTATGCATATCAGGCAGTTGTGAAAATTGGTGGCCATGTGTTCAAAGGGTTCTTATATGATCAAGGGGTTGAAGGTAGAGAAGGGTTTCCCAACATCTCCGAATTGCATTTGGGGGGTGGTGGCGGCACTAGTGGTGGTGGCAATGGGGGACGAAATGGGGCTTCTTCCCCGATTCTCGATAGCTCGGACGTTTATGGGGCGTCTAGTGGAGGATTGCTGGGAGGTTCAAACTTTGGTAATCCAATAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF702

Protein Analysis

426

Amino Acids

43.71

Weight (kDa)

8.1

Isoelectric Point (pI)

46.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009808)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G12330 AT5G12330 AT5G12330 AT5G12330
fragaria_vesca FvH4_3g27920
malus_domestica MD03G1166900.v1.1 MD11G1186100.v1.1
prunus_persica Prupe.4G267200_v2.0.a1
pyrus_communis pycom03g12230 pycom12g08680
rosa_chinensis RchiOBHm_Chr5g0050641
rosa_laevigata RLG00000034715
rosa_multiflora Rmu_ssc0000350.1_g000034
rosa_roxburghii Rroxscaffold_1G00030150
rosa_rugosa Rorug05G0262400 Rorug05G0262500
rosa_samantha Rh5AG334700 Rh5BG344000 Rh5CG371800 Rh5DG357000
rosa_wichuraiana Rw5G031570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 92
AatII GACGTC 1 cut(s) 90
AccB1I GGYRCC 1 cut(s) 848
AccBSI CCGCTC 2 cut(s) 227, 763
AccI GTMKAC 3 cut(s) 309, 620, 815
AccII CGCG 2 cut(s) 446, 1004
AclI AACGTT 1 cut(s) 582
AclWI GGATC 1 cut(s) 152
AcoI YGGCCR 4 cut(s) 63, 105, 421, 1057
AcsI RAATTY 2 cut(s) 462, 589
AcvI CACGTG 1 cut(s) 724
AcyI GRCGYC 6 cut(s) 87, 246, 252, 617, 849, 1226
AfaI GTAC 1 cut(s) 966
AfiI CCNNNNNNNGG 2 cut(s) 14, 445
AflIII ACRYGT 1 cut(s) 629
AgsI TTSAA 8 cut(s) 499, 554, 885, 943, 985, 1069, 1097, 1254
AhlI ACTAGT 1 cut(s) 1154
AjiI CACGTC 2 cut(s) 630, 687
AjnI CCWGG 1 cut(s) 648
AluBI AGCT 6 cut(s) 469, 749, 769, 906, 918, 1209
AluI AGCT 6 cut(s) 469, 749, 769, 906, 918, 1209
Alw21I GWGCWC 2 cut(s) 734, 973
Alw26I GTCTC 3 cut(s) 78, 536, 873
AlwI GGATC 1 cut(s) 152
Ama87I CYCGRG 1 cut(s) 56
ApeKI GCWGC 8 cut(s) 417, 475, 478, 521, 605, 690, 746, 766
ApoI RAATTY 2 cut(s) 462, 589
Asp700I GAANNNNTTC 1 cut(s) 1110
AspA2I CCTAGG 1 cut(s) 836
AspLEI GCGC 2 cut(s) 446, 851
AspS9I GGNCC 6 cut(s) 6, 17, 100, 540, 739, 958
AsuC2I CCSGG 5 cut(s) 104, 613, 701, 743, 957
AsuHPI GGTGA 4 cut(s) 125, 259, 917, 1009
AvaI CYCGRG 1 cut(s) 56
AvaII GGWCC 2 cut(s) 540, 739
AvrII CCTAGG 1 cut(s) 836
BalI TGGCCA 1 cut(s) 1059
BanI GGYRCC 1 cut(s) 848
BarI GAAGNNNNNNTAC 2 cut(s) 895, 927
BbrPI CACGTG 1 cut(s) 724
BbsI GAAGAC 2 cut(s) 82, 1017
Bbv12I GWGCWC 2 cut(s) 734, 973
BbvI GCAGC 8 cut(s) 429, 487, 490, 508, 592, 677, 758, 778
BccI CCATC 3 cut(s) 55, 138, 206
BceAI ACGGC 1 cut(s) 1030
BcgI CGANNNNNNTGC 2 cut(s) 1010, 1044
BciT130I CCWGG 1 cut(s) 650
BclI TGATCA 1 cut(s) 1084
BcnI CCSGG 5 cut(s) 104, 613, 701, 743, 957
BcoDI GTCTC 3 cut(s) 78, 536, 873
BcuI ACTAGT 1 cut(s) 1154
BfaI CTAG 6 cut(s) 837, 900, 915, 921, 1155, 1230
BfmI CTRYAG 2 cut(s) 40, 342
BfoI RGCGCY 1 cut(s) 852
BglI GCCNNNNNGGC 1 cut(s) 614
BlnI CCTAGG 1 cut(s) 836
Bme1390I CCNGG 6 cut(s) 104, 613, 650, 701, 743, 957
Bme18I GGWCC 2 cut(s) 540, 739
BmeT110I CYCGRG 1 cut(s) 56
BmgBI CACGTC 2 cut(s) 630, 687
BmgT120I GGNCC 6 cut(s) 6, 17, 100, 540, 739, 958
BmiI GGNNCC 7 cut(s) 102, 541, 542, 647, 740, 741, 850
BmrFI CCNGG 6 cut(s) 104, 613, 650, 701, 743, 957
BmsI GCATC 2 cut(s) 436, 922
BpiI GAAGAC 2 cut(s) 82, 1017
BpmI CTGGAG 1 cut(s) 807
BpuMI CCSGG 5 cut(s) 104, 613, 701, 743, 957
BsaAI YACGTR 2 cut(s) 724, 968
BsaBI GATNNNNATC 1 cut(s) 162
BsaHI GRCGYC 6 cut(s) 87, 246, 252, 617, 849, 1226
BsaJI CCNNGG 5 cut(s) 102, 612, 700, 836, 1002
Bsc4I CCNNNNNNNGG 2 cut(s) 14, 445
Bse118I RCCGGY 1 cut(s) 65
Bse1I ACTGG 1 cut(s) 822
Bse3DI GCAATG 2 cut(s) 950, 1174
Bse8I GATNNNNATC 1 cut(s) 162
BseBI CCWGG 1 cut(s) 650
BseDI CCNNGG 5 cut(s) 102, 612, 700, 836, 1002
BseGI GGATG 2 cut(s) 255, 818
BseJI GATNNNNATC 1 cut(s) 162
BseLI CCNNNNNNNGG 2 cut(s) 14, 445
BseMI GCAATG 2 cut(s) 950, 1174
BseMII CTCAG 1 cut(s) 94
BseNI ACTGG 1 cut(s) 822
BseRI GAGGAG 6 cut(s) 158, 169, 254, 465, 468, 471
BseX3I CGGCCG 1 cut(s) 105
BseXI GCAGC 8 cut(s) 429, 487, 490, 508, 592, 677, 758, 778
BseYI CCCAGC 4 cut(s) 23, 483, 797, 1243
BsgI GTGCAG 2 cut(s) 649, 700
Bsh1236I CGCG 2 cut(s) 446, 1004
Bsh1285I CGRYCG 1 cut(s) 108
BshNI GGYRCC 1 cut(s) 848
BsiEI CGRYCG 1 cut(s) 108
BsiHKAI GWGCWC 2 cut(s) 734, 973
BsiHKCI CYCGRG 1 cut(s) 56
BsiSI CCGG 9 cut(s) 15, 66, 104, 594, 612, 700, 743, 956, 974
BslFI GGGAC 3 cut(s) 553, 725, 1188
BslI CCNNNNNNNGG 2 cut(s) 14, 445
BsmAI GTCTC 3 cut(s) 78, 536, 873
BsmBI CGTCTC 2 cut(s) 78, 873
BsmFI GGGAC 3 cut(s) 553, 725, 1188
BsoBI CYCGRG 1 cut(s) 56
Bsp1286I GDGCHC 2 cut(s) 734, 973
Bsp143I GATC 3 cut(s) 157, 514, 1084
BspCNI CTCAG 1 cut(s) 93
BspFNI CGCG 2 cut(s) 446, 1004
BspLI GGNNCC 7 cut(s) 102, 541, 542, 647, 740, 741, 850
BspPI GGATC 1 cut(s) 152
BspQI GCTCTTC 1 cut(s) 722
BspT107I GGYRCC 1 cut(s) 848
BsrBI CCGCTC 2 cut(s) 227, 763
BsrDI GCAATG 2 cut(s) 950, 1174
BsrFI RCCGGY 1 cut(s) 65
BsrI ACTGG 1 cut(s) 822
BssAI RCCGGY 1 cut(s) 65
BssECI CCNNGG 5 cut(s) 102, 612, 700, 836, 1002
BssMI GATC 3 cut(s) 157, 514, 1084
BssNI GRCGYC 6 cut(s) 87, 246, 252, 617, 849, 1226
BssT1I CCWWGG 1 cut(s) 836
Bst2UI CCWGG 1 cut(s) 650
Bst4CI ACNGT 1 cut(s) 713
Bst6I CTCTTC 1 cut(s) 722
BstACI GRCGYC 6 cut(s) 87, 246, 252, 617, 849, 1226
BstAPI GCANNNNNTGC 1 cut(s) 687
BstBAI YACGTR 2 cut(s) 724, 968
BstC8I GCNNGC 4 cut(s) 29, 67, 425, 668
BstDEI CTNAG 1 cut(s) 80
BstDSI CCRYGG 1 cut(s) 1002
BstEII GGTNACC 1 cut(s) 997
BstF5I GGATG 2 cut(s) 255, 818
BstFNI CGCG 2 cut(s) 446, 1004
BstH2I RGCGCY 1 cut(s) 852
BstHHI GCGC 2 cut(s) 446, 851
BstKTI GATC 3 cut(s) 160, 517, 1087
BstMAI GTCTC 3 cut(s) 78, 536, 873
BstMBI GATC 3 cut(s) 157, 514, 1084
BstMCI CGRYCG 1 cut(s) 108
BstNI CCWGG 1 cut(s) 650
BstPI GGTNACC 1 cut(s) 997
BstSCI CCNGG 6 cut(s) 102, 611, 648, 699, 741, 955
BstSFI CTRYAG 2 cut(s) 40, 342
BstUI CGCG 2 cut(s) 446, 1004
BstV1I GCAGC 8 cut(s) 429, 487, 490, 508, 592, 677, 758, 778
BstV2I GAAGAC 2 cut(s) 82, 1017
BstXI CCANNNNNNTGG 1 cut(s) 935
BstZI CGGCCG 1 cut(s) 105
BtgI CCRYGG 1 cut(s) 1002
BtrI CACGTC 2 cut(s) 630, 687
BtsCI GGATG 2 cut(s) 255, 818
BtsI GCAGTG 1 cut(s) 984
BtsIMutI CAGTG 2 cut(s) 829, 984
Cac8I GCNNGC 4 cut(s) 29, 67, 425, 668
CfoI GCGC 2 cut(s) 446, 851
Cfr10I RCCGGY 1 cut(s) 65
Cfr13I GGNCC 6 cut(s) 6, 17, 100, 540, 739, 958
Cfr42I CCGCGG 1 cut(s) 1005
CseI GACGC 4 cut(s) 235, 241, 606, 1215
Csp6I GTAC 1 cut(s) 965
CviAII CATG 8 cut(s) 70, 355, 361, 367, 403, 512, 735, 1061
CviQI GTAC 1 cut(s) 965
DdeI CTNAG 1 cut(s) 80
DinI GGCGCC 1 cut(s) 850
DpnI GATC 3 cut(s) 159, 516, 1086
DpnII GATC 3 cut(s) 157, 514, 1084
DrdI GACNNNNNNGTC 1 cut(s) 92
DseDI GACNNNNNNGTC 1 cut(s) 92
EaeI YGGCCR 4 cut(s) 63, 105, 421, 1057
EagI CGGCCG 1 cut(s) 105
Eam1104I CTCTTC 1 cut(s) 722
EarI CTCTTC 1 cut(s) 722
EciI GGCGGA 2 cut(s) 582, 769
EclXI CGGCCG 1 cut(s) 105
Eco130I CCWWGG 1 cut(s) 836
Eco147I AGGCCT 1 cut(s) 31
Eco47I GGWCC 2 cut(s) 540, 739
Eco52I CGGCCG 1 cut(s) 105
Eco72I CACGTG 1 cut(s) 724
Eco88I CYCGRG 1 cut(s) 56
Eco91I GGTNACC 1 cut(s) 997
EcoO109I RGGNCCY 2 cut(s) 540, 739
EcoO65I GGTNACC 1 cut(s) 997
EcoRI GAATTC 2 cut(s) 462, 589
EcoRII CCWGG 1 cut(s) 648
EcoT14I CCWWGG 1 cut(s) 836
EcoT22I ATGCAT 1 cut(s) 1033
EgeI GGCGCC 1 cut(s) 850
EheI GGCGCC 1 cut(s) 850
ErhI CCWWGG 1 cut(s) 836
Esp3I CGTCTC 2 cut(s) 78, 873
FaeI CATG 8 cut(s) 73, 358, 364, 370, 406, 515, 738, 1064
FaqI GGGAC 3 cut(s) 553, 725, 1188
FatI CATG 8 cut(s) 69, 354, 360, 366, 402, 511, 734, 1060
FauI CCCGC 4 cut(s) 226, 297, 439, 530
FbaI TGATCA 1 cut(s) 1084
FblI GTMKAC 3 cut(s) 309, 620, 815
FokI GGATG 2 cut(s) 242, 805
FspBI CTAG 6 cut(s) 837, 900, 915, 921, 1155, 1230
GlaI GCGC 2 cut(s) 445, 850
GsaI CCCAGC 4 cut(s) 27, 487, 801, 1247
GsuI CTGGAG 1 cut(s) 807
HaeII RGCGCY 1 cut(s) 852
HapII CCGG 9 cut(s) 15, 66, 104, 594, 612, 700, 743, 956, 974
HgaI GACGC 4 cut(s) 235, 241, 606, 1215
HhaI GCGC 2 cut(s) 446, 851
Hin1I GRCGYC 6 cut(s) 87, 246, 252, 617, 849, 1226
Hin1II CATG 8 cut(s) 73, 358, 364, 370, 406, 515, 738, 1064
Hin6I GCGC 2 cut(s) 444, 849
HinP1I GCGC 2 cut(s) 444, 849
HincII GTYRAC 2 cut(s) 310, 621
HindII GTYRAC 2 cut(s) 310, 621
HinfI GANTC 3 cut(s) 529, 947, 1198
HpaII CCGG 9 cut(s) 15, 66, 104, 594, 612, 700, 743, 956, 974
HphI GGTGA 4 cut(s) 125, 259, 917, 1009
Hpy166II GTNNAC 3 cut(s) 310, 621, 816
Hpy188I TCNGA 4 cut(s) 83, 184, 1126, 1213
Hpy188III TCNNGA 4 cut(s) 56, 499, 635, 1202
Hpy8I GTNNAC 3 cut(s) 310, 621, 816
Hpy99I CGWCG 5 cut(s) 98, 251, 314, 622, 1022
HpyAV CCTTC 2 cut(s) 1091, 1100
HpyCH4III ACNGT 1 cut(s) 713
HpyCH4IV ACGT 8 cut(s) 87, 582, 629, 686, 723, 866, 967, 1215
HpyCH4V TGCA 5 cut(s) 666, 681, 693, 1031, 1132
HpyF3I CTNAG 1 cut(s) 80
HpySE526I ACGT 8 cut(s) 87, 582, 629, 686, 723, 866, 967, 1215
Hsp92I GRCGYC 6 cut(s) 87, 246, 252, 617, 849, 1226
Hsp92II CATG 8 cut(s) 73, 358, 364, 370, 406, 515, 738, 1064
HspAI GCGC 2 cut(s) 444, 849
KasI GGCGCC 1 cut(s) 848
KflI GGGWCCC 2 cut(s) 540, 739
KroI GCCGGC 1 cut(s) 65
KroNI GCCGGC 1 cut(s) 67
Ksp22I TGATCA 1 cut(s) 1084
KspI CCGCGG 1 cut(s) 1005
Kzo9I GATC 3 cut(s) 157, 514, 1084
LguI GCTCTTC 1 cut(s) 722
LmnI GCTCC 1 cut(s) 976
Lsp1109I GCAGC 8 cut(s) 429, 487, 490, 508, 592, 677, 758, 778
LweI GCATC 2 cut(s) 436, 922
MaeI CTAG 6 cut(s) 837, 900, 915, 921, 1155, 1230
MaeII ACGT 8 cut(s) 87, 582, 629, 686, 723, 866, 967, 1215
MaeIII GTNAC 2 cut(s) 923, 997
MalI GATC 3 cut(s) 159, 516, 1086
MbiI CCGCTC 2 cut(s) 227, 763
MboI GATC 3 cut(s) 157, 514, 1084
MboII GAAGA 7 cut(s) 82, 332, 487, 667, 739, 1022, 1182
MhlI GDGCHC 2 cut(s) 734, 973
MlsI TGGCCA 1 cut(s) 1059
MluCI AATT 6 cut(s) 462, 589, 805, 1050, 1127, 1273
MluNI TGGCCA 1 cut(s) 1059
Mly113I GGCGCC 1 cut(s) 849
MlyI GAGTC 2 cut(s) 538, 956
MmeI TCCRAC 1 cut(s) 207
Mox20I TGGCCA 1 cut(s) 1059
Mph1103I ATGCAT 1 cut(s) 1033
MroNI GCCGGC 1 cut(s) 65
MroXI GAANNNNTTC 1 cut(s) 1110
MscI TGGCCA 1 cut(s) 1059
MslI CAYNNNNRTG 5 cut(s) 359, 365, 371, 407, 930
Msp20I TGGCCA 1 cut(s) 1059
MspA1I CMGCKG 5 cut(s) 420, 469, 605, 769, 1004
MspI CCGG 9 cut(s) 15, 66, 104, 594, 612, 700, 743, 956, 974
MspR9I CCNGG 6 cut(s) 104, 613, 650, 701, 743, 957
MvaI CCWGG 1 cut(s) 650
MvnI CGCG 2 cut(s) 446, 1004
NaeI GCCGGC 1 cut(s) 67
NarI GGCGCC 1 cut(s) 849
NciI CCSGG 5 cut(s) 104, 613, 701, 743, 957
NdeII GATC 3 cut(s) 157, 514, 1084
NgoMIV GCCGGC 1 cut(s) 65
NlaIII CATG 8 cut(s) 73, 358, 364, 370, 406, 515, 738, 1064
NlaIV GGNNCC 7 cut(s) 102, 541, 542, 647, 740, 741, 850
NmeAIII GCCGAG 2 cut(s) 513, 730
NmuCI GTSAC 2 cut(s) 923, 997
NsiI ATGCAT 1 cut(s) 1033
PceI AGGCCT 1 cut(s) 31
PciSI GCTCTTC 1 cut(s) 722
PcsI WCGNNNNNNNCGW 4 cut(s) 93, 315, 436, 626
PdiI GCCGGC 1 cut(s) 67
PdmI GAANNNNTTC 1 cut(s) 1110
PfeI GAWTC 1 cut(s) 1198
PflFI GACNNNGTC 1 cut(s) 865
PleI GAGTC 2 cut(s) 537, 955
PluTI GGCGCC 1 cut(s) 852
PmaCI CACGTG 1 cut(s) 724
PmlI CACGTG 1 cut(s) 724
PpsI GAGTC 2 cut(s) 537, 955
Ppu21I YACGTR 2 cut(s) 724, 968
PpuMI RGGWCCY 2 cut(s) 540, 739
Psp1406I AACGTT 1 cut(s) 582
Psp5II RGGWCCY 2 cut(s) 540, 739
Psp6I CCWGG 1 cut(s) 648
PspCI CACGTG 1 cut(s) 724
PspEI GGTNACC 1 cut(s) 997
PspFI CCCAGC 4 cut(s) 23, 483, 797, 1243
PspGI CCWGG 1 cut(s) 648
PspN4I GGNNCC 7 cut(s) 102, 541, 542, 647, 740, 741, 850
PspPI GGNCC 6 cut(s) 6, 17, 100, 540, 739, 958
PspPPI RGGWCCY 2 cut(s) 540, 739
PsyI GACNNNGTC 1 cut(s) 865
PvuII CAGCTG 2 cut(s) 469, 769
RsaI GTAC 1 cut(s) 966
RsaNI GTAC 1 cut(s) 965
RseI CAYNNNNRTG 5 cut(s) 359, 365, 371, 407, 930
SacII CCGCGG 1 cut(s) 1005
SalI GTCGAC 2 cut(s) 308, 619
SapI GCTCTTC 1 cut(s) 722
Sau3AI GATC 3 cut(s) 157, 514, 1084
Sau96I GGNCC 6 cut(s) 6, 17, 100, 540, 739, 958
SchI GAGTC 2 cut(s) 538, 956
ScrFI CCNGG 6 cut(s) 104, 613, 650, 701, 743, 957
SduI GDGCHC 2 cut(s) 734, 973
SfaNI GCATC 2 cut(s) 436, 922
SfcI CTRYAG 2 cut(s) 40, 342
SfoI GGCGCC 1 cut(s) 850
Sfr303I CCGCGG 1 cut(s) 1005
SgrBI CCGCGG 1 cut(s) 1005
SinI GGWCC 2 cut(s) 540, 739
SmiMI CAYNNNNRTG 5 cut(s) 359, 365, 371, 407, 930
SpeI ACTAGT 1 cut(s) 1154
Sse9I AATT 6 cut(s) 462, 589, 805, 1050, 1127, 1273
SseBI AGGCCT 1 cut(s) 31
SspDI GGCGCC 1 cut(s) 848
SspMI CTAG 6 cut(s) 837, 900, 915, 921, 1155, 1230
StuI AGGCCT 1 cut(s) 31
StyD4I CCNGG 6 cut(s) 102, 611, 648, 699, 741, 955
StyI CCWWGG 1 cut(s) 836
TaaI ACNGT 1 cut(s) 713
TaiI ACGT 8 cut(s) 90, 585, 632, 689, 726, 869, 970, 1218
TaqI TCGA 5 cut(s) 309, 430, 620, 708, 1203
TasI AATT 6 cut(s) 462, 589, 805, 1050, 1127, 1273
TauI GCSGC 8 cut(s) 110, 113, 423, 567, 605, 766, 785, 1152
TfiI GAWTC 1 cut(s) 1198
TscAI CASTG 2 cut(s) 829, 984
TseFI GTSAC 2 cut(s) 923, 997
TseI GCWGC 8 cut(s) 417, 475, 478, 521, 605, 690, 746, 766
Tsp45I GTSAC 2 cut(s) 923, 997
TspDTI ATGAA 1 cut(s) 602
TspRI CASTG 2 cut(s) 829, 984
Tth111I GACNNNGTC 1 cut(s) 865
VpaK11BI GGWCC 2 cut(s) 540, 739
XapI RAATTY 2 cut(s) 462, 589
XmaJI CCTAGG 1 cut(s) 836
XmiI GTMKAC 3 cut(s) 309, 620, 815
XmnI GAANNNNTTC 1 cut(s) 1110
XspI CTAG 6 cut(s) 837, 900, 915, 921, 1155, 1230
ZraI GACGTC 1 cut(s) 88
Zsp2I ATGCAT 1 cut(s) 1033
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.