RLG00000034715

Protein LATERAL ROOT PRIMORDIUM

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0009808
Physical Location & Seq
Reverse (-)
52745235 .. 52750156
4922 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034715

Sequence Viewer

Length: 1917 bp
ATGCAGCAGTTTGGTTCTTTTGACTCAGATAGGTGGTCTCCCTCCTCTCTGGTCTCTGATGAAGGTGGTCTTAAGGCTGTTGTGCATTGGATCCTCTTGGCATTGGGAGGCCTCGGCCTACTTCTTCTTGTTTCTGGCACTCGGTGCTCCTTTGGGTCTCCGACGATTGGTTATGATGGCCTTCCTCCGGCATGGAGTGTTGTGGGTCCAGATCTAGCAGGTTGCTCTGGTGGTTGGGTTGAGGGGGAATCGAGCTTCCCTCCTGTGTCTGTCGGCGTCAGATCTGGAGCCATATTTGATGTGTGGCAGTGGCGCGTGCGGCGGCCAGGCGATGTTGGTAGTGTAATCGGACGGGATGCGGGGCTTTCGGCGTATGGCTCGTCTACTTCATGGGGGCAAGAGTTTGCTTCTGGAGTGAATGCGTCTGCCTGTGATGACAGGTCCTTGGGGTGGAACGACGCTGGGGCTGCCAGCGCGAGGTGGTCGTTGGGAGGTTTGGGCACTGACGTCAGCATGGTGGATCAAAGGCTGGATCTAGGGCTTTCAGTTGTGGCTACCACAAGGAGGCTGCCTTCAGATTCTGGTGCTTTTGCAGACTGGGTGGGGGGCTCATCAGCTTCGTCTTCGGCTAACGATCTCTGTCTAGGCTTCAATGCTGGGCCTACTGCCGGACCCTCCCCCTCTGCCTCAGCCGCCATGTGGTCGTCATCATCAGGCCCTTCCAGGCCCATCAACTACGGCTTCCCACCGGAGATGGGTATGCTCGGCCTTCGAGACGTCTTCCTTGTTGCTCCAGCTGCAGCCTACCACAATCACCCGCACCACCACCACCACCACCACCCCCCACACCATCAACAAGACCTTCTCTCACCTGATCATAATTCCATGAATGCCTCTAATCCCGCCACAGCTCTCGGCGTCGGCGTCATTCCCCTCCTCACCACCACCCCTTGCCTGGGCCCTCCCAATACCAACATGAATGATGACAATGATGATGATGATGATGATCACAACATGCTGAGCGGTCGCAACAGAAACAGTGCAGGAGGAGGAGGAGGAGGAAGTATTCACTTGTGGCAGCAGCCGACCCAGCAACAACACCAACTTTTCCTCAAGAAAAACCAGAACCTTCACGGTGGCGCCCATTTGATGGTTCAAGGTGGTGGTGGTGGGAATTTTGGTGCCTCGGCGGCATCGGCATCGTCGGCTCTCACTTGTCAAGACTGCGGGAACCAGGCCAAGAAAGACTGCAATCATCGGCGGTGCAGGACATGCTGCAAGAGCCGTGGTTTTGATTGTGCCACGCACGTGAAGAGCACGTGGGTCCCAGCGGCTAGACGCAGGGAGCGGCAGCTCATGTCCGAGGGAGTGGCGGCGGCCGGGTCTTCTGCGTCTACCTCTCACACTAATAATACTAGTTCCAATGCCAAAAAACCAAGACTGGTTACTTCGCAAAACACAACTCCCTCTCATACTAACTCCACTTCAAACACTACGCCACCCAGAAGCTATGACAGTACCTCCAAACTCCAACACCAAGATGGTGGTTTTCCAGAGACAATGCCGGGCCAAGTACGGGCGCCAGCGGTTTTTAAGTGCGTTCGAGTAACGGCCGTGGATGATGGTGCAGAGGATGAGTATGCCTATCACGCTGTCGTCAAAATCAACGGTCATGTGTTTAAGGGGTTCTTGTATGATCAAGGGGTTGAAGGTCAAGGTAGAGATCATCATGGCTTCCCTAATATTTCTGATTTGCATTTGGGTGGTAGAAGCGGAGGTGCCACTAGTACCCCAACTGGAAGAAGTGGAGGTGCTCCAATACTCGACCCCGCGGATGCTTATGCAGCCGCTGCAGCGGCCTCCACTAGTGGAGGATTGCTGCTGGGAGGTTCAAACTTTGGTAACTCAATAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF702

Protein Analysis

639

Amino Acids

66.26

Weight (kDa)

6.38

Isoelectric Point (pI)

45.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF702 PF05142 404 - 570 5.4e-60 Domain of unknown function (DUF702)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009808)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G12330 AT5G12330 AT5G12330 AT5G12330
fragaria_vesca FvH4_3g27920
malus_domestica MD03G1166900.v1.1 MD11G1186100.v1.1
prunus_persica Prupe.4G267200_v2.0.a1
pyrus_communis pycom03g12230 pycom12g08680
rosa_chinensis RchiOBHm_Chr5g0050641
rosa_laevigata RLG00000034715
rosa_multiflora Rmu_ssc0000350.1_g000034
rosa_roxburghii Rroxscaffold_1G00030150
rosa_rugosa Rorug05G0262400 Rorug05G0262500
rosa_samantha Rh5AG334700 Rh5BG344000 Rh5CG371800 Rh5DG357000
rosa_wichuraiana Rw5G031570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 510, 780
Acc36I ACCTGC 1 cut(s) 209
AccB1I GGYRCC 4 cut(s) 1139, 1181, 1579, 1778
AccB7I CCANNNNNTGG 1 cut(s) 1150
AccBSI CCGCTC 2 cut(s) 1023, 1348
AccI GTMKAC 2 cut(s) 383, 1394
AccII CGCG 3 cut(s) 315, 476, 1832
AclWI GGATC 4 cut(s) 85, 98, 528, 540
AcoI YGGCCR 3 cut(s) 323, 1377, 1611
AcsI RAATTY 1 cut(s) 1174
AcuI CTGAAG 1 cut(s) 558
AcvI CACGTG 2 cut(s) 1309, 1320
AcyI GRCGYC 7 cut(s) 276, 507, 777, 918, 924, 1140, 1580
AdeI CACNNNGTG 1 cut(s) 144
AfaI GTAC 3 cut(s) 1519, 1575, 1789
AflII CTTAAG 1 cut(s) 71
AgsI TTSAA 5 cut(s) 652, 1157, 1488, 1709, 1893
AhlI ACTAGT 3 cut(s) 1415, 1784, 1865
AjnI CCWGG 4 cut(s) 325, 722, 954, 1233
AleI CACNNNNGTG 1 cut(s) 1307
AluBI AGCT 6 cut(s) 255, 617, 797, 911, 1354, 1509
AluI AGCT 6 cut(s) 255, 617, 797, 911, 1354, 1509
Alw21I GWGCWC 3 cut(s) 149, 1319, 1816
Alw26I GTCTC 5 cut(s) 42, 58, 162, 768, 1550
AlwI GGATC 4 cut(s) 85, 98, 528, 540
AlwNI CAGNNNCTG 2 cut(s) 581, 1850
ApaI GGGCCC 1 cut(s) 962
ApoI RAATTY 1 cut(s) 1174
AspLEI GCGC 4 cut(s) 315, 476, 1142, 1582
AsuC2I CCSGG 2 cut(s) 1381, 1566
AsuHPI GGTGA 3 cut(s) 806, 861, 931
AvaII GGWCC 4 cut(s) 206, 441, 671, 1324
BaeGI GKGCMC 2 cut(s) 503, 962
BamHI GGATCC 1 cut(s) 90
BanI GGYRCC 4 cut(s) 1139, 1181, 1579, 1778
BanII GRGCYC 2 cut(s) 611, 962
BbrPI CACGTG 2 cut(s) 1309, 1320
BbsI GAAGAC 3 cut(s) 615, 772, 1377
Bbv12I GWGCWC 3 cut(s) 149, 1319, 1816
BbvCI CCTCAGC 1 cut(s) 688
BccI CCATC 7 cut(s) 170, 737, 748, 858, 1144, 1535, 1616
BceAI ACGGC 4 cut(s) 754, 1269, 1598, 1626
BcgI CGANNNNNNTGC 2 cut(s) 1182, 1216
BciT130I CCWGG 4 cut(s) 327, 724, 956, 1235
BclI TGATCA 3 cut(s) 874, 1006, 1696
BcnI CCSGG 2 cut(s) 1381, 1566
BcoDI GTCTC 5 cut(s) 42, 58, 162, 768, 1550
BcuI ACTAGT 3 cut(s) 1415, 1784, 1865
BfaI CTAG 7 cut(s) 215, 536, 644, 1335, 1416, 1785, 1866
BfmI CTRYAG 2 cut(s) 798, 1851
BfoI RGCGCY 2 cut(s) 1143, 1583
BfrI CTTAAG 1 cut(s) 71
BfuAI ACCTGC 1 cut(s) 209
BglI GCCNNNNNGGC 1 cut(s) 1190
BglII AGATCT 2 cut(s) 211, 281
BlpI GCTNAGC 1 cut(s) 1019
Bme1390I CCNGG 6 cut(s) 327, 724, 956, 1235, 1381, 1566
Bme18I GGWCC 4 cut(s) 206, 441, 671, 1324
BmrFI CCNGG 6 cut(s) 327, 724, 956, 1235, 1381, 1566
BmrI ACTGGG 1 cut(s) 607
BmsI GCATC 4 cut(s) 346, 1202, 1208, 1825
BmuI ACTGGG 1 cut(s) 607
BpiI GAAGAC 3 cut(s) 615, 772, 1377
BplI GAGNNNNNCTC 2 cut(s) 244, 276
BpmI CTGGAG 3 cut(s) 306, 432, 777
Bpu10I CCTNAGC 1 cut(s) 688
Bpu1102I GCTNAGC 1 cut(s) 1019
BpuEI CTTGAG 1 cut(s) 1097
BpuMI CCSGG 2 cut(s) 1381, 1566
BsaAI YACGTR 2 cut(s) 1309, 1320
BsaBI GATNNNNATC 1 cut(s) 1005
BsaHI GRCGYC 7 cut(s) 276, 507, 777, 918, 924, 1140, 1580
BsaI GGTCTC 3 cut(s) 42, 58, 162
BsaJI CCNNGG 8 cut(s) 112, 444, 955, 1185, 1285, 1362, 1614, 1830
BsaWI WCCGGW 1 cut(s) 748
BsaXI ACNNNNNCTCC 2 cut(s) 1505, 1535
Bse1I ACTGG 3 cut(s) 602, 1446, 1801
Bse8I GATNNNNATC 1 cut(s) 1005
BseBI CCWGG 4 cut(s) 327, 724, 956, 1235
BseDI CCNNGG 8 cut(s) 112, 444, 955, 1185, 1285, 1362, 1614, 1830
BseGI GGATG 4 cut(s) 361, 1624, 1639, 1840
BseJI GATNNNNATC 1 cut(s) 1005
BseMII CTCAG 3 cut(s) 39, 702, 1010
BseNI ACTGG 3 cut(s) 602, 1446, 1801
BseRI GAGGAG 6 cut(s) 34, 926, 1062, 1065, 1068, 1071
BseSI GKGCMC 2 cut(s) 503, 962
BseX3I CGGCCG 2 cut(s) 1377, 1611
BseYI CCCAGC 5 cut(s) 461, 656, 1089, 1327, 1882
BsgI GTGCAG 3 cut(s) 1062, 1285, 1647
Bsh1236I CGCG 3 cut(s) 315, 476, 1832
Bsh1285I CGRYCG 3 cut(s) 1027, 1380, 1614
BshNI GGYRCC 4 cut(s) 1139, 1181, 1579, 1778
BsiEI CGRYCG 3 cut(s) 1027, 1380, 1614
BsiHKAI GWGCWC 3 cut(s) 149, 1319, 1816
BsiSI CCGG 5 cut(s) 188, 669, 749, 1380, 1565
BslFI GGGAC 1 cut(s) 1310
BsmAI GTCTC 5 cut(s) 42, 58, 162, 768, 1550
BsmBI CGTCTC 1 cut(s) 768
BsmFI GGGAC 1 cut(s) 1310
BsmI GAATGC 2 cut(s) 424, 895
Bso31I GGTCTC 3 cut(s) 42, 58, 162
Bsp120I GGGCCC 1 cut(s) 958
Bsp1286I GDGCHC 6 cut(s) 149, 503, 611, 962, 1319, 1816
Bsp1720I GCTNAGC 1 cut(s) 1019
BspCNI CTCAG 3 cut(s) 38, 701, 1011
BspFNI CGCG 3 cut(s) 315, 476, 1832
BspMAI CTGCAG 2 cut(s) 802, 1855
BspMI ACCTGC 1 cut(s) 209
BspPI GGATC 4 cut(s) 85, 98, 528, 540
BspQI GCTCTTC 1 cut(s) 1307
BspT107I GGYRCC 4 cut(s) 1139, 1181, 1579, 1778
BspTI CTTAAG 1 cut(s) 71
BspTNI GGTCTC 3 cut(s) 42, 58, 162
BsrBI CCGCTC 2 cut(s) 1023, 1348
BsrI ACTGG 3 cut(s) 602, 1446, 1801
BssECI CCNNGG 8 cut(s) 112, 444, 955, 1185, 1285, 1362, 1614, 1830
BssNI GRCGYC 7 cut(s) 276, 507, 777, 918, 924, 1140, 1580
BssT1I CCWWGG 1 cut(s) 444
Bst2UI CCWGG 4 cut(s) 327, 724, 956, 1235
Bst4CI ACNGT 4 cut(s) 1040, 1136, 1517, 1670
Bst6I CTCTTC 1 cut(s) 1307
BstACI GRCGYC 7 cut(s) 276, 507, 777, 918, 924, 1140, 1580
BstAFI CTTAAG 1 cut(s) 71
BstAPI GCANNNNNTGC 3 cut(s) 144, 1272, 1850
BstBAI YACGTR 2 cut(s) 1309, 1320
BstC8I GCNNGC 3 cut(s) 317, 472, 1584
BstDEI CTNAG 3 cut(s) 25, 688, 1019
BstDSI CCRYGG 3 cut(s) 1285, 1614, 1830
BstF5I GGATG 4 cut(s) 361, 1624, 1639, 1840
BstFNI CGCG 3 cut(s) 315, 476, 1832
BstH2I RGCGCY 2 cut(s) 1143, 1583
BstHHI GCGC 4 cut(s) 315, 476, 1142, 1582
BstMAI GTCTC 5 cut(s) 42, 58, 162, 768, 1550
BstMCI CGRYCG 3 cut(s) 1027, 1380, 1614
BstNI CCWGG 4 cut(s) 327, 724, 956, 1235
BstNSI RCATGY 2 cut(s) 1018, 1275
BstSCI CCNGG 6 cut(s) 325, 722, 954, 1233, 1379, 1564
BstSFI CTRYAG 2 cut(s) 798, 1851
BstSLI GKGCMC 2 cut(s) 503, 962
BstUI CGCG 3 cut(s) 315, 476, 1832
BstV2I GAAGAC 3 cut(s) 615, 772, 1377
BstX2I RGATCY 4 cut(s) 90, 211, 281, 532
BstXI CCANNNNNNTGG 1 cut(s) 1544
BstYI RGATCY 4 cut(s) 90, 211, 281, 532
BstZI CGGCCG 2 cut(s) 1377, 1611
BtgI CCRYGG 3 cut(s) 1285, 1614, 1830
BtgZI GCGATG 1 cut(s) 345
BtsCI GGATG 4 cut(s) 361, 1624, 1639, 1840
BtsI GCAGTG 1 cut(s) 314
BtsIMutI CAGTG 3 cut(s) 314, 501, 1045
BveI ACCTGC 1 cut(s) 209
Cac8I GCNNGC 3 cut(s) 317, 472, 1584
CaiI CAGNNNCTG 2 cut(s) 581, 1850
CfoI GCGC 4 cut(s) 315, 476, 1142, 1582
Cfr42I CCGCGG 1 cut(s) 1833
CseI GACGC 7 cut(s) 265, 411, 467, 907, 913, 1347, 1380
Csp6I GTAC 3 cut(s) 1518, 1574, 1788
CspCI CAANNNNNGTGG 2 cut(s) 1267, 1302
CviQI GTAC 3 cut(s) 1518, 1574, 1788
DdeI CTNAG 3 cut(s) 25, 688, 1019
DinI GGCGCC 2 cut(s) 1141, 1581
DraIII CACNNNGTG 1 cut(s) 144
EaeI YGGCCR 3 cut(s) 323, 1377, 1611
EagI CGGCCG 2 cut(s) 1377, 1611
Eam1104I CTCTTC 1 cut(s) 1307
EarI CTCTTC 1 cut(s) 1307
EclXI CGGCCG 2 cut(s) 1377, 1611
Eco130I CCWWGG 1 cut(s) 444
Eco147I AGGCCT 1 cut(s) 111
Eco24I GRGCYC 2 cut(s) 611, 962
Eco31I GGTCTC 3 cut(s) 42, 58, 162
Eco47I GGWCC 4 cut(s) 206, 441, 671, 1324
Eco52I CGGCCG 2 cut(s) 1377, 1611
Eco57I CTGAAG 1 cut(s) 558
Eco72I CACGTG 2 cut(s) 1309, 1320
EcoO109I RGGNCCY 4 cut(s) 441, 716, 959, 1324
EcoRII CCWGG 4 cut(s) 325, 722, 954, 1233
EcoT14I CCWWGG 1 cut(s) 444
EcoT38I GRGCYC 2 cut(s) 611, 962
EgeI GGCGCC 2 cut(s) 1141, 1581
EheI GGCGCC 2 cut(s) 1141, 1581
ErhI CCWWGG 1 cut(s) 444
Esp3I CGTCTC 1 cut(s) 768
FalI AAGNNNNNCTT 4 cut(s) 54, 86, 1673, 1705
FaqI GGGAC 1 cut(s) 1310
FauI CCCGC 5 cut(s) 352, 825, 910, 1220, 1837
FbaI TGATCA 3 cut(s) 874, 1006, 1696
FblI GTMKAC 2 cut(s) 383, 1394
FokI GGATG 4 cut(s) 368, 1631, 1646, 1847
FriOI GRGCYC 2 cut(s) 611, 962
FspBI CTAG 7 cut(s) 215, 536, 644, 1335, 1416, 1785, 1866
GlaI GCGC 4 cut(s) 314, 475, 1141, 1581
GsaI CCCAGC 5 cut(s) 465, 660, 1093, 1331, 1886
GsuI CTGGAG 3 cut(s) 306, 432, 777
HaeII RGCGCY 2 cut(s) 1143, 1583
HapII CCGG 5 cut(s) 188, 669, 749, 1380, 1565
HgaI GACGC 7 cut(s) 265, 411, 467, 907, 913, 1347, 1380
HhaI GCGC 4 cut(s) 315, 476, 1142, 1582
Hin1I GRCGYC 7 cut(s) 276, 507, 777, 918, 924, 1140, 1580
Hin6I GCGC 4 cut(s) 313, 474, 1140, 1580
HinP1I GCGC 4 cut(s) 313, 474, 1140, 1580
HinfI GANTC 3 cut(s) 23, 248, 578
HpaII CCGG 5 cut(s) 188, 669, 749, 1380, 1565
HphI GGTGA 3 cut(s) 806, 861, 931
Hpy166II GTNNAC 2 cut(s) 384, 1395
Hpy188I TCNGA 8 cut(s) 28, 58, 162, 281, 350, 577, 1363, 1750
Hpy188III TCNNGA 7 cut(s) 209, 285, 411, 773, 1114, 1220, 1553
Hpy8I GTNNAC 2 cut(s) 384, 1395
Hpy99I CGWCG 4 cut(s) 166, 461, 923, 1207
HpyAV CCTTC 8 cut(s) 56, 191, 582, 729, 779, 872, 1139, 1703
HpyCH4III ACNGT 4 cut(s) 1040, 1136, 1517, 1670
HpyCH4IV ACGT 4 cut(s) 507, 777, 1308, 1319
HpyF3I CTNAG 3 cut(s) 25, 688, 1019
HpySE526I ACGT 4 cut(s) 507, 777, 1308, 1319
Hsp92I GRCGYC 7 cut(s) 276, 507, 777, 918, 924, 1140, 1580
HspAI GCGC 4 cut(s) 313, 474, 1140, 1580
KasI GGCGCC 2 cut(s) 1139, 1579
KflI GGGWCCC 1 cut(s) 1324
Ksp22I TGATCA 3 cut(s) 874, 1006, 1696
KspI CCGCGG 1 cut(s) 1833
LguI GCTCTTC 1 cut(s) 1307
LmnI GCTCC 5 cut(s) 152, 287, 796, 1345, 1819
LweI GCATC 4 cut(s) 346, 1202, 1208, 1825
MaeI CTAG 7 cut(s) 215, 536, 644, 1335, 1416, 1785, 1866
MaeII ACGT 4 cut(s) 507, 777, 1308, 1319
MaeIII GTNAC 3 cut(s) 1444, 1606, 1901
MbiI CCGCTC 2 cut(s) 1023, 1348
MboII GAAGA 6 cut(s) 116, 615, 772, 1324, 1377, 1812
MflI RGATCY 4 cut(s) 90, 211, 281, 532
MhlI GDGCHC 6 cut(s) 149, 503, 611, 962, 1319, 1816
MluCI AATT 3 cut(s) 880, 1174, 1912
Mly113I GGCGCC 2 cut(s) 1140, 1580
MlyI GAGTC 1 cut(s) 17
MmeI TCCRAC 2 cut(s) 185, 1555
MseI TTAA 4 cut(s) 72, 1593, 1680, 1915
MslI CAYNNNNRTG 3 cut(s) 1307, 1539, 1761
MspA1I CMGCKG 6 cut(s) 797, 1331, 1586, 1832, 1850, 1856
MspCI CTTAAG 1 cut(s) 71
MspI CCGG 5 cut(s) 188, 669, 749, 1380, 1565
MspR9I CCNGG 6 cut(s) 327, 724, 956, 1235, 1381, 1566
Mva1269I GAATGC 2 cut(s) 424, 895
MvaI CCWGG 4 cut(s) 327, 724, 956, 1235
MvnI CGCG 3 cut(s) 315, 476, 1832
NarI GGCGCC 2 cut(s) 1140, 1580
NciI CCSGG 2 cut(s) 1381, 1566
NmeAIII GCCGAG 4 cut(s) 93, 744, 894, 1166
NspI RCATGY 2 cut(s) 1018, 1275
OliI CACNNNNGTG 1 cut(s) 1307
PceI AGGCCT 1 cut(s) 111
PciSI GCTCTTC 1 cut(s) 1307
PcsI WCGNNNNNNNCGW 1 cut(s) 921
PctI GAATGC 2 cut(s) 424, 895
PfeI GAWTC 2 cut(s) 248, 578
PflMI CCANNNNNTGG 1 cut(s) 1150
PleI GAGTC 1 cut(s) 17
PluTI GGCGCC 2 cut(s) 1143, 1583
PmaCI CACGTG 2 cut(s) 1309, 1320
PmlI CACGTG 2 cut(s) 1309, 1320
PpsI GAGTC 1 cut(s) 17
Ppu21I YACGTR 2 cut(s) 1309, 1320
PpuMI RGGWCCY 2 cut(s) 441, 1324
Psp5II RGGWCCY 2 cut(s) 441, 1324
Psp6I CCWGG 4 cut(s) 325, 722, 954, 1233
PspCI CACGTG 2 cut(s) 1309, 1320
PspFI CCCAGC 5 cut(s) 461, 656, 1089, 1327, 1882
PspGI CCWGG 4 cut(s) 325, 722, 954, 1233
PspOMI GGGCCC 1 cut(s) 958
PspPPI RGGWCCY 2 cut(s) 441, 1324
PstI CTGCAG 2 cut(s) 802, 1855
PstNI CAGNNNCTG 2 cut(s) 581, 1850
PsuI RGATCY 4 cut(s) 90, 211, 281, 532
PvuII CAGCTG 1 cut(s) 797
RsaI GTAC 3 cut(s) 1519, 1575, 1789
RsaNI GTAC 3 cut(s) 1518, 1574, 1788
RseI CAYNNNNRTG 3 cut(s) 1307, 1539, 1761
SacII CCGCGG 1 cut(s) 1833
SapI GCTCTTC 1 cut(s) 1307
SaqAI TTAA 4 cut(s) 72, 1593, 1680, 1915
SchI GAGTC 1 cut(s) 17
ScrFI CCNGG 6 cut(s) 327, 724, 956, 1235, 1381, 1566
SduI GDGCHC 6 cut(s) 149, 503, 611, 962, 1319, 1816
SfaNI GCATC 4 cut(s) 346, 1202, 1208, 1825
SfcI CTRYAG 2 cut(s) 798, 1851
SfoI GGCGCC 2 cut(s) 1141, 1581
Sfr303I CCGCGG 1 cut(s) 1833
SgrBI CCGCGG 1 cut(s) 1833
SinI GGWCC 4 cut(s) 206, 441, 671, 1324
SmiMI CAYNNNNRTG 3 cut(s) 1307, 1539, 1761
SmlI CTYRAG 2 cut(s) 71, 1112
SmoI CTYRAG 2 cut(s) 71, 1112
SpeI ACTAGT 3 cut(s) 1415, 1784, 1865
Sse9I AATT 3 cut(s) 880, 1174, 1912
SseBI AGGCCT 1 cut(s) 111
SspDI GGCGCC 2 cut(s) 1139, 1579
SspI AATATT 1 cut(s) 1744
SspMI CTAG 7 cut(s) 215, 536, 644, 1335, 1416, 1785, 1866
StuI AGGCCT 1 cut(s) 111
StyD4I CCNGG 6 cut(s) 325, 722, 954, 1233, 1379, 1564
StyI CCWWGG 1 cut(s) 444
TaaI ACNGT 4 cut(s) 1040, 1136, 1517, 1670
TaiI ACGT 4 cut(s) 510, 780, 1311, 1322
TaqI TCGA 4 cut(s) 251, 772, 1603, 1824
TasI AATT 3 cut(s) 880, 1174, 1912
TfiI GAWTC 2 cut(s) 248, 578
Tru1I TTAA 4 cut(s) 72, 1593, 1680, 1915
Tru9I TTAA 4 cut(s) 72, 1593, 1680, 1915
TscAI CASTG 3 cut(s) 314, 508, 1045
TspDTI ATGAA 4 cut(s) 75, 378, 902, 992
TspRI CASTG 3 cut(s) 314, 508, 1045
Van91I CCANNNNNTGG 1 cut(s) 1150
Vha464I CTTAAG 1 cut(s) 71
VpaK11BI GGWCC 4 cut(s) 206, 441, 671, 1324
XapI RAATTY 1 cut(s) 1174
XceI RCATGY 2 cut(s) 1018, 1275
XcmI CCANNNNNNNNNTGG 2 cut(s) 952, 1538
XmiI GTMKAC 2 cut(s) 383, 1394
XspI CTAG 7 cut(s) 215, 536, 644, 1335, 1416, 1785, 1866
ZraI GACGTC 2 cut(s) 508, 778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.