No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G70350 |
| fragaria_vesca | FvH4_4g34460 FvH4_4g34460 FvH4_4g34460 |
| malus_domestica | MD13G1091900.v1.1 MD16G1092500.v1.1 |
| prunus_persica | Prupe.1G253900_v2.0.a1 Prupe.5G015600_v2.0.a1 |
| pyrus_communis | pycom13g07980 pycom16g07890 |
| rosa_chinensis | RchiOBHm_Chr4g0443841 RchiOBHm_Chr4g0443851 |
| rosa_multiflora | Rmu_sc0005632.1_g000007 Rmu_sc0019062.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00384410 |
| rosa_rugosa | Rorug04G0347700 |
| rosa_samantha | Rh4AG408000 Rh4AG408100 Rh4BG419000 Rh4BG419100 Rh4CG433100 Rh4CG433200 Rh4DG414200 Rh4DG414300 |
| rosa_wichuraiana | Rw4G035040 Rw4G035050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 5, 194 |
| AclWI | GGATC | 1 cut(s) | 205 |
| AfaI | GTAC | 1 cut(s) | 70 |
| AluBI | AGCT | 3 cut(s) | 98, 163, 276 |
| AluI | AGCT | 3 cut(s) | 98, 163, 276 |
| AlwI | GGATC | 1 cut(s) | 205 |
| AoxI | GGCC | 1 cut(s) | 300 |
| ApeKI | GCWGC | 1 cut(s) | 152 |
| AspS9I | GGNCC | 1 cut(s) | 300 |
| AsuHPI | GGTGA | 1 cut(s) | 72 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 61, 93 |
| BbvI | GCAGC | 1 cut(s) | 139 |
| BccI | CCATC | 2 cut(s) | 82, 290 |
| BceAI | ACGGC | 2 cut(s) | 51, 107 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 101, 135 |
| BfaI | CTAG | 1 cut(s) | 18 |
| BisI | GCNGC | 2 cut(s) | 6, 153 |
| BlsI | GCNGC | 2 cut(s) | 7, 154 |
| BmgT120I | GGNCC | 1 cut(s) | 300 |
| BmiI | GGNNCC | 1 cut(s) | 301 |
| BmsI | GCATC | 1 cut(s) | 272 |
| BpuEI | CTTGAG | 1 cut(s) | 149 |
| BsaBI | GATNNNNATC | 1 cut(s) | 286 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 124, 154 |
| Bse1I | ACTGG | 1 cut(s) | 182 |
| Bse3DI | GCAATG | 1 cut(s) | 215 |
| Bse8I | GATNNNNATC | 1 cut(s) | 286 |
| BseGI | GGATG | 1 cut(s) | 287 |
| BseJI | GATNNNNATC | 1 cut(s) | 286 |
| BseMI | GCAATG | 1 cut(s) | 215 |
| BseMII | CTCAG | 1 cut(s) | 170 |
| BseNI | ACTGG | 1 cut(s) | 182 |
| BseRI | GAGGAG | 1 cut(s) | 132 |
| BseXI | GCAGC | 1 cut(s) | 139 |
| BseYI | CCCAGC | 1 cut(s) | 276 |
| BsgI | GTGCAG | 1 cut(s) | 221 |
| BshFI | GGCC | 1 cut(s) | 302 |
| BsnI | GGCC | 1 cut(s) | 302 |
| Bsp143I | GATC | 1 cut(s) | 210 |
| BspACI | CCGC | 2 cut(s) | 5, 194 |
| BspANI | GGCC | 1 cut(s) | 302 |
| BspCNI | CTCAG | 1 cut(s) | 169 |
| BspLI | GGNNCC | 1 cut(s) | 301 |
| BspPI | GGATC | 1 cut(s) | 205 |
| BsrDI | GCAATG | 1 cut(s) | 215 |
| BsrI | ACTGG | 1 cut(s) | 182 |
| BssMI | GATC | 1 cut(s) | 210 |
| BstDEI | CTNAG | 1 cut(s) | 156 |
| BstF5I | GGATG | 1 cut(s) | 287 |
| BstKTI | GATC | 1 cut(s) | 213 |
| BstMBI | GATC | 1 cut(s) | 210 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 95, 282 |
| BstV1I | GCAGC | 1 cut(s) | 139 |
| BsuRI | GGCC | 1 cut(s) | 302 |
| BtsCI | GGATG | 1 cut(s) | 287 |
| BtsIMutI | CAGTG | 1 cut(s) | 189 |
| Cfr13I | GGNCC | 1 cut(s) | 300 |
| Csp6I | GTAC | 1 cut(s) | 69 |
| CviAII | CATG | 1 cut(s) | 304 |
| CviJI | RGCY | 6 cut(s) | 8, 98, 130, 163, 276, 302 |
| CviKI_1 | RGCY | 6 cut(s) | 8, 98, 130, 163, 276, 302 |
| CviQI | GTAC | 1 cut(s) | 69 |
| DdeI | CTNAG | 1 cut(s) | 156 |
| DpnI | GATC | 1 cut(s) | 212 |
| DpnII | GATC | 1 cut(s) | 210 |
| FaeI | CATG | 1 cut(s) | 307 |
| FaiI | YATR | 2 cut(s) | 222, 305 |
| FatI | CATG | 1 cut(s) | 303 |
| FauI | CCCGC | 1 cut(s) | 187 |
| Fnu4HI | GCNGC | 2 cut(s) | 6, 153 |
| FokI | GGATG | 1 cut(s) | 294 |
| Fsp4HI | GCNGC | 2 cut(s) | 6, 153 |
| FspBI | CTAG | 1 cut(s) | 18 |
| GluI | GCNGC | 2 cut(s) | 6, 153 |
| GsaI | CCCAGC | 1 cut(s) | 280 |
| HaeIII | GGCC | 1 cut(s) | 302 |
| Hin1II | CATG | 1 cut(s) | 307 |
| HindIII | AAGCTT | 1 cut(s) | 96 |
| HinfI | GANTC | 1 cut(s) | 147 |
| HphI | GGTGA | 1 cut(s) | 72 |
| Hpy166II | GTNNAC | 2 cut(s) | 71, 246 |
| Hpy188I | TCNGA | 2 cut(s) | 159, 292 |
| Hpy188III | TCNNGA | 1 cut(s) | 174 |
| Hpy8I | GTNNAC | 2 cut(s) | 71, 246 |
| HpyCH4V | TGCA | 4 cut(s) | 50, 202, 220, 265 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 95, 282 |
| HpyF3I | CTNAG | 1 cut(s) | 156 |
| Hsp92II | CATG | 1 cut(s) | 307 |
| Kzo9I | GATC | 1 cut(s) | 210 |
| LmnI | GCTCC | 2 cut(s) | 145, 258 |
| LpnPI | CCDG | 2 cut(s) | 195, 262 |
| Lsp1109I | GCAGC | 1 cut(s) | 139 |
| LweI | GCATC | 1 cut(s) | 272 |
| MaeI | CTAG | 1 cut(s) | 18 |
| MalI | GATC | 1 cut(s) | 212 |
| MboI | GATC | 1 cut(s) | 210 |
| MboII | GAAGA | 4 cut(s) | 30, 36, 69, 305 |
| MluCI | AATT | 1 cut(s) | 32 |
| MlyI | GAGTC | 1 cut(s) | 141 |
| MnlI | CCTC | 2 cut(s) | 100, 153 |
| MspA1I | CMGCKG | 1 cut(s) | 276 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 95, 282 |
| NdeII | GATC | 1 cut(s) | 210 |
| NlaIII | CATG | 1 cut(s) | 307 |
| NlaIV | GGNNCC | 1 cut(s) | 301 |
| PkrI | GCNGC | 2 cut(s) | 7, 154 |
| PleI | GAGTC | 1 cut(s) | 141 |
| PpsI | GAGTC | 1 cut(s) | 141 |
| PspFI | CCCAGC | 1 cut(s) | 276 |
| PspN4I | GGNNCC | 1 cut(s) | 301 |
| PspPI | GGNCC | 1 cut(s) | 300 |
| PvuII | CAGCTG | 1 cut(s) | 276 |
| RsaI | GTAC | 1 cut(s) | 70 |
| RsaNI | GTAC | 1 cut(s) | 69 |
| SatI | GCNGC | 2 cut(s) | 6, 153 |
| Sau3AI | GATC | 1 cut(s) | 210 |
| Sau96I | GGNCC | 1 cut(s) | 300 |
| SchI | GAGTC | 1 cut(s) | 141 |
| SetI | ASST | 4 cut(s) | 85, 100, 165, 278 |
| SfaNI | GCATC | 1 cut(s) | 272 |
| SmlI | CTYRAG | 1 cut(s) | 164 |
| SmoI | CTYRAG | 1 cut(s) | 164 |
| Sse9I | AATT | 1 cut(s) | 32 |
| SsiI | CCGC | 2 cut(s) | 5, 194 |
| SspMI | CTAG | 1 cut(s) | 18 |
| TaqI | TCGA | 2 cut(s) | 111, 145 |
| TasI | AATT | 1 cut(s) | 32 |
| TauI | GCSGC | 1 cut(s) | 8 |
| TscAI | CASTG | 1 cut(s) | 189 |
| TseI | GCWGC | 1 cut(s) | 152 |
| TspDTI | ATGAA | 1 cut(s) | 30 |
| TspRI | CASTG | 1 cut(s) | 189 |
| XspI | CTAG | 1 cut(s) | 18 |