Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0006531

Physical Location & Seq

Genomic Coordinates Reverse (-)

9365947 .. 9368096

Gene Structure 2150 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G080000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 735 bp

ATGGCGTGGAACGCGTTCAAGCTCTGTACGGCTCTGCGTGCACTCGGCTACATCATGGTCCTCGTGGTTCTCGTCATAGTCGGGCTCACCTACTACGCCGTCGTTTTGGCCAATTATTTGCCTGCTATCTTTGGCGGAGGCCTCAGTGCCGTCATTGCCTTCCCTCTCTTGATCTTGTTCCATTTTCTGTTGGTGATGCTGTTGTGGAGCTACTTTAATGTTGTTCTAAATGATCCTGGGGTTGTTCCACCGAATTGGAGGCCTGCAAATGATGAGGAGGGAGGTGACGGAGCCCCATTGGTGGGATCGGACCAATCTACCCTGGTCAGTGACCCAGCAAATCAAAAAGTACGGTTCTGTCGGAAGTGCAACCACTTTAAACCACCTCGATGTCATCATTGTTCTGTTTGTGGGAGGTGCATATTGAAAATGGACCATCATTGTGTGTGGGTGGTCAACTGTGTTGGGGCATTGAATTACAAGTACTTCCTTCTCTTCTTGTTTTACACATTTCTTGAGACAACTCTCGTCACTTTATCATTATTCAAGTATTTTATGGCATTTTTTACTGAAGAAGAGGTAATTGGAACACTGGGCACTGTTGCAGCCAGTTTTATCACATTTGTTTTGAACTTCGCATTTGCTTTGAGCGTTTTTGGCTTCATGATCATGCACCTATCACTGGTAGCGTCCAATACCACCACTATTGAGGTGATGGCTTTTGTTATACTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000138 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005795 GO:0005802 GO:0007275 GO:0007568 GO:0008150 GO:0010150 GO:0012505 GO:0016417 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019707 GO:0031323 GO:0031410 GO:0031982 GO:0031984 GO:0031985 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0065007 GO:0090693 GO:0097708 GO:0098791 GO:0099402 GO:0140096 GO:1900055 GO:2000024 GO:2000026 GO:2000377

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DHHC

Protein Analysis

245

Amino Acids

27.2

Weight (kDa)

7.01

Isoelectric Point (pI)

33.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006531)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G22750
fragaria_vesca	FvH4_5g00750 FvH4_5g00750 FvH4_5g00750 FvH4_5g00750 FvH4_5g00750 FvH4_5g00750 FvH4_5g00750 FvH4_5g00750 FvH4_5g00750
malus_domestica	MD04G1079200.v1.1
prunus_persica	Prupe.5G080000_v2.0.a1 Prupe.5G080000_v2.0.a1
pyrus_communis	pycom04g07100
rosa_chinensis	RchiOBHm_Chr7g0201481
rosa_laevigata	RLG00000003673
rosa_multiflora	Rmu_co8345589.1_g000001 Rmu_sc0002046.1_g000006 Rmu_sc0017656.1_g000006
rosa_roxburghii	Rroxscaffold_3G00255270
rosa_rugosa	Rorug07G0063900
rosa_samantha	Rh7AG190800 Rh7BG193000 Rh7CG202000 Rh7DG195500
rosa_wichuraiana	Rw7G016730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	14
AciI	CCGC	1 cut(s)	135
AclWI	GGATC	2 cut(s)	227, 313
AcoI	YGGCCR	1 cut(s)	108
AcuI	CTGAAG	1 cut(s)	591
AfaI	GTAC	3 cut(s)	28, 351, 485
AfiI	CCNNNNNNNGG	3 cut(s)	301, 302, 682
AflIII	ACRYGT	1 cut(s)	12
AgsI	TTSAA	5 cut(s)	19, 427, 475, 547, 631
AjnI	CCWGG	2 cut(s)	235, 321
AjuI	GAANNNNNNNTTGG	2 cut(s)	567, 599
AluBI	AGCT	2 cut(s)	22, 210
AluI	AGCT	2 cut(s)	22, 210
Alw21I	GWGCWC	1 cut(s)	43
Alw26I	GTCTC	1 cut(s)	512
Alw44I	GTGCAC	1 cut(s)	39
AlwI	GGATC	2 cut(s)	227, 313
AoxI	GGCC	3 cut(s)	108, 139, 260
ApaLI	GTGCAC	1 cut(s)	39
ApeKI	GCWGC	1 cut(s)	605
Asp700I	GAANNNNTTC	1 cut(s)	14
AspS9I	GGNCC	3 cut(s)	58, 310, 433
AsuHPI	GGTGA	4 cut(s)	79, 205, 296, 724
AvaII	GGWCC	3 cut(s)	58, 310, 433
BaeGI	GKGCMC	2 cut(s)	43, 599
BalI	TGGCCA	1 cut(s)	110
BanII	GRGCYC	2 cut(s)	87, 295
BauI	CACGAG	1 cut(s)	62
Bbv12I	GWGCWC	1 cut(s)	43
BbvI	GCAGC	1 cut(s)	617
BccI	CCATC	2 cut(s)	444, 709
BceAI	ACGGC	3 cut(s)	45, 83, 134
BciT130I	CCWGG	2 cut(s)	237, 323
BclI	TGATCA	1 cut(s)	666
BcoDI	GTCTC	1 cut(s)	512
BisI	GCNGC	1 cut(s)	606
BlsI	GCNGC	1 cut(s)	607
BmcAI	AGTACT	1 cut(s)	485
Bme1390I	CCNGG	2 cut(s)	237, 323
Bme18I	GGWCC	3 cut(s)	58, 310, 433
BmgT120I	GGNCC	3 cut(s)	58, 310, 433
BmiI	GGNNCC	1 cut(s)	292
BmrFI	CCNGG	2 cut(s)	237, 323
BmrI	ACTGGG	1 cut(s)	602
BmsI	GCATC	1 cut(s)	186
BmuI	ACTGGG	1 cut(s)	602
BpuEI	CTTGAG	1 cut(s)	536
BsaJI	CCNNGG	2 cut(s)	236, 321
Bsc4I	CCNNNNNNNGG	3 cut(s)	301, 302, 682
Bse1I	ACTGG	3 cut(s)	597, 609, 687
Bse3DI	GCAATG	1 cut(s)	153
BseBI	CCWGG	2 cut(s)	237, 323
BseDI	CCNNGG	2 cut(s)	236, 321
BseLI	CCNNNNNNNGG	3 cut(s)	301, 302, 682
BseMI	GCAATG	1 cut(s)	153
BseMII	CTCAG	1 cut(s)	157
BseNI	ACTGG	3 cut(s)	597, 609, 687
BseRI	GAGGAG	1 cut(s)	290
BseSI	GKGCMC	2 cut(s)	43, 599
BseXI	GCAGC	1 cut(s)	617
BseYI	CCCAGC	1 cut(s)	334
Bsh1236I	CGCG	1 cut(s)	14
BshFI	GGCC	3 cut(s)	110, 141, 262
BsiHKAI	GWGCWC	1 cut(s)	43
BslI	CCNNNNNNNGG	3 cut(s)	301, 302, 682
BsmAI	GTCTC	1 cut(s)	512
BsnI	GGCC	3 cut(s)	110, 141, 262
Bsp1286I	GDGCHC	4 cut(s)	43, 87, 295, 599
Bsp143I	GATC	4 cut(s)	171, 232, 305, 666
BspACI	CCGC	1 cut(s)	135
BspANI	GGCC	3 cut(s)	110, 141, 262
BspCNI	CTCAG	1 cut(s)	156
BspFNI	CGCG	1 cut(s)	14
BspHI	TCATGA	1 cut(s)	663
BspLI	GGNNCC	1 cut(s)	292
BspPI	GGATC	2 cut(s)	227, 313
BsrDI	GCAATG	1 cut(s)	153
BsrI	ACTGG	3 cut(s)	597, 609, 687
BssECI	CCNNGG	2 cut(s)	236, 321
BssMI	GATC	4 cut(s)	171, 232, 305, 666
BssSI	CACGAG	1 cut(s)	62
Bst2BI	CACGAG	1 cut(s)	62
Bst2UI	CCWGG	2 cut(s)	237, 323
Bst4CI	ACNGT	3 cut(s)	354, 461, 601
Bst6I	CTCTTC	2 cut(s)	500, 570
BstC8I	GCNNGC	3 cut(s)	39, 123, 264
BstDEI	CTNAG	1 cut(s)	143
BstFNI	CGCG	1 cut(s)	14
BstKTI	GATC	4 cut(s)	174, 235, 308, 669
BstMAI	GTCTC	1 cut(s)	512
BstMBI	GATC	4 cut(s)	171, 232, 305, 666
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 38, 155, 657
BstNI	CCWGG	2 cut(s)	237, 323
BstSCI	CCNGG	2 cut(s)	235, 321
BstSLI	GKGCMC	2 cut(s)	43, 599
BstUI	CGCG	1 cut(s)	14
BstV1I	GCAGC	1 cut(s)	617
BstXI	CCANNNNNNTGG	1 cut(s)	255
BsuRI	GGCC	3 cut(s)	110, 141, 262
BtsIMutI	CAGTG	5 cut(s)	151, 334, 590, 597, 680
Cac8I	GCNNGC	3 cut(s)	39, 123, 264
CciI	TCATGA	1 cut(s)	663
Cfr13I	GGNCC	3 cut(s)	58, 310, 433
CseI	GACGC	1 cut(s)	678
Csp6I	GTAC	3 cut(s)	27, 350, 484
CspCI	CAANNNNNGTGG	2 cut(s)	688, 723
CviAII	CATG	3 cut(s)	55, 664, 670
CviQI	GTAC	3 cut(s)	27, 350, 484
DdeI	CTNAG	1 cut(s)	143
DpnI	GATC	4 cut(s)	173, 234, 307, 668
DpnII	GATC	4 cut(s)	171, 232, 305, 666
DraI	TTTAAA	1 cut(s)	379
EaeI	YGGCCR	1 cut(s)	108
Eam1104I	CTCTTC	2 cut(s)	500, 570
EarI	CTCTTC	2 cut(s)	500, 570
EciI	GGCGGA	1 cut(s)	150
Eco147I	AGGCCT	2 cut(s)	141, 262
Eco24I	GRGCYC	2 cut(s)	87, 295
Eco47I	GGWCC	3 cut(s)	58, 310, 433
Eco57I	CTGAAG	1 cut(s)	591
EcoRII	CCWGG	2 cut(s)	235, 321
EcoT38I	GRGCYC	2 cut(s)	87, 295
FaeI	CATG	3 cut(s)	58, 667, 673
FaiI	YATR	7 cut(s)	56, 77, 422, 557, 665, 671, 728
FatI	CATG	3 cut(s)	54, 663, 669
FbaI	TGATCA	1 cut(s)	666
Fnu4HI	GCNGC	1 cut(s)	606
FriOI	GRGCYC	2 cut(s)	87, 295
Fsp4HI	GCNGC	1 cut(s)	606
GluI	GCNGC	1 cut(s)	606
GsaI	CCCAGC	1 cut(s)	338
HaeIII	GGCC	3 cut(s)	110, 141, 262
HgaI	GACGC	1 cut(s)	678
Hin1II	CATG	3 cut(s)	58, 667, 673
HincII	GTYRAC	1 cut(s)	457
HindII	GTYRAC	1 cut(s)	457
HphI	GGTGA	4 cut(s)	79, 205, 296, 724
Hpy166II	GTNNAC	2 cut(s)	41, 457
Hpy188I	TCNGA	2 cut(s)	310, 363
Hpy188III	TCNNGA	3 cut(s)	169, 515, 664
Hpy8I	GTNNAC	2 cut(s)	41, 457
Hpy99I	CGWCG	1 cut(s)	104
HpyAV	CCTTC	2 cut(s)	169, 500
HpyCH4III	ACNGT	3 cut(s)	354, 461, 601
HpyCH4V	TGCA	6 cut(s)	41, 266, 369, 420, 605, 673
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 38, 155, 657
HpyF3I	CTNAG	1 cut(s)	143
Hsp92II	CATG	3 cut(s)	58, 667, 673
Ksp22I	TGATCA	1 cut(s)	666
Kzo9I	GATC	4 cut(s)	171, 232, 305, 666
LmnI	GCTCC	2 cut(s)	207, 290
Lsp1109I	GCAGC	1 cut(s)	617
LweI	GCATC	1 cut(s)	186
MaeIII	GTNAC	3 cut(s)	284, 329, 529
MalI	GATC	4 cut(s)	173, 234, 307, 668
MboI	GATC	4 cut(s)	171, 232, 305, 666
MboII	GAAGA	3 cut(s)	487, 584, 587
MhlI	GDGCHC	4 cut(s)	43, 87, 295, 599
MlsI	TGGCCA	1 cut(s)	110
MluCI	AATT	4 cut(s)	112, 253, 475, 582
MluI	ACGCGT	1 cut(s)	12
MluNI	TGGCCA	1 cut(s)	110
MmeI	TCCRAC	1 cut(s)	341
Mox20I	TGGCCA	1 cut(s)	110
MroXI	GAANNNNTTC	1 cut(s)	14
MscI	TGGCCA	1 cut(s)	110
MseI	TTAA	3 cut(s)	216, 378, 733
MslI	CAYNNNNRTG	3 cut(s)	388, 441, 668
Msp20I	TGGCCA	1 cut(s)	110
MspR9I	CCNGG	2 cut(s)	237, 323
MvaI	CCWGG	2 cut(s)	237, 323
MvnI	CGCG	1 cut(s)	14
MwoI	GCNNNNNNNGC	4 cut(s)	11, 38, 155, 657
NdeII	GATC	4 cut(s)	171, 232, 305, 666
NlaIII	CATG	3 cut(s)	58, 667, 673
NlaIV	GGNNCC	1 cut(s)	292
NmeAIII	GCCGAG	1 cut(s)	24
NmuCI	GTSAC	3 cut(s)	284, 329, 529
PagI	TCATGA	1 cut(s)	663
PceI	AGGCCT	2 cut(s)	141, 262
PcsI	WCGNNNNNNNCGW	1 cut(s)	69
PdmI	GAANNNNTTC	1 cut(s)	14
PkrI	GCNGC	1 cut(s)	607
Psp6I	CCWGG	2 cut(s)	235, 321
PspFI	CCCAGC	1 cut(s)	334
PspGI	CCWGG	2 cut(s)	235, 321
PspN4I	GGNNCC	1 cut(s)	292
PspPI	GGNCC	3 cut(s)	58, 310, 433
RsaI	GTAC	3 cut(s)	28, 351, 485
RsaNI	GTAC	3 cut(s)	27, 350, 484
RseI	CAYNNNNRTG	3 cut(s)	388, 441, 668
SaqAI	TTAA	3 cut(s)	216, 378, 733
SatI	GCNGC	1 cut(s)	606
Sau3AI	GATC	4 cut(s)	171, 232, 305, 666
Sau96I	GGNCC	3 cut(s)	58, 310, 433
ScaI	AGTACT	1 cut(s)	485
ScrFI	CCNGG	2 cut(s)	237, 323
SduI	GDGCHC	4 cut(s)	43, 87, 295, 599
SetI	ASST	9 cut(s)	24, 92, 212, 286, 388, 419, 582, 678, 714
SfaNI	GCATC	1 cut(s)	186
SinI	GGWCC	3 cut(s)	58, 310, 433
SmiMI	CAYNNNNRTG	3 cut(s)	388, 441, 668
SmlI	CTYRAG	1 cut(s)	515
SmoI	CTYRAG	1 cut(s)	515
Sse9I	AATT	4 cut(s)	112, 253, 475, 582
SseBI	AGGCCT	2 cut(s)	141, 262
SsiI	CCGC	1 cut(s)	135
StuI	AGGCCT	2 cut(s)	141, 262
StyD4I	CCNGG	2 cut(s)	235, 321
TaaI	ACNGT	3 cut(s)	354, 461, 601
TaqI	TCGA	1 cut(s)	388
TasI	AATT	4 cut(s)	112, 253, 475, 582
TatI	WGTACW	1 cut(s)	483
Tru1I	TTAA	3 cut(s)	216, 378, 733
Tru9I	TTAA	3 cut(s)	216, 378, 733
TscAI	CASTG	5 cut(s)	151, 334, 597, 604, 687
TseFI	GTSAC	3 cut(s)	284, 329, 529
TseI	GCWGC	1 cut(s)	605
Tsp45I	GTSAC	3 cut(s)	284, 329, 529
TspDTI	ATGAA	1 cut(s)	652
TspGWI	ACGGA	1 cut(s)	303
TspRI	CASTG	5 cut(s)	151, 334, 597, 604, 687
VneI	GTGCAC	1 cut(s)	39
VpaK11BI	GGWCC	3 cut(s)	58, 310, 433
XmnI	GAANNNNTTC	1 cut(s)	14
ZrmI	AGTACT	1 cut(s)	485

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.