Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0012029

Physical Location & Seq

Genomic Coordinates Reverse (-)

10489927 .. 10495067

Gene Structure 5141 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G095400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2292 bp

ATGTCCGCTTCGATCCTTTTGGAACGGTCGAGAGACTTCTCGAAGCTTCTATGCAGGCTCGTACTGACCCGACCCATGGGCGGCGGGCCCCGGACCTTCCCGGGAGGCGTCACCAAATGGAAATGGAAGCGCATGCACGAAAAACGAGCCAAAGAGAAGGAGAAGCGCCTCTTAGAACAAGAGAAACAGCTCTACGAGGCCCGTCTCCGCTCCCAAATCCGGGCCAAAGTCGCCGGGAAACCCGACCCGTTTTCAAATCAGGGTTCAGAAACCGGGCACAACCCTATGAACCCCAACGAGCACCTTAAAGCCCTAGCCGATCGGTTCATGAAAGAAGGCGCAGAAGATTTGTGGAACGAAAAGGATGGGCCGATTGATGACCGGCCTCCACCGGTTGGCTCGGACGCACGGACGAGATCGGTTACCGCACCACCGTTAGACCTGAGGAAGCTGATATCGAAAGGTCATGATTTGGCGGGAAATGGTGGAAGTGTAAATTTGATAAATTTGAGTGGCAATCAGGTTAGGGGTAGGAACTACTCGGTTCAGAGCCGTGGGCGGTTTCGGAGAAACGATAATTCAAGCGATGAAGACTCGGATTTCGATTCAGAAGGTGAGTCCGTACAGCCCTTTGCTAATGAGAATTCGAAATTTGGGAGAAATGTGAGGAAATTAGGGAGTAGTGCTTCATTGGGGAAGTATGATGTGAAGATTATTAAGAGGAGGGTGCCCCTTAATTCATTAGACGAGGAGAGTGATTTTGCGCAGCAGGTCGAGTCGATAAGGTACGAGCTTAGTAAGAAAAATGCTGCTGGAAATGAACGAGGGGAGGATAGGGAACAGGAGGAGACAATTCTTAGTGGAAAGAGATTTGATGAGTGTGGTATATCTCCATTGACAGTCAAGGCACTGACTTCTGCTGGCTATATTCAAATGACAAGAGTACAGGAGGCTGCTCTTTCTGTTTGTCTTGAAGGAAAAGATGCGTTGATCAAAGCTAAAACAGGCACTGGAAAAACTGCAGCTTTTGTGCTTCCTGCTATTGAAGCAGTTGTGAAGGCTAAGACTAGCAATACCAATCAACGGGTGTCTCCAGTTCTTGTTCTTATCCTCTGCCCCACAAGAGAACTTGCAAGTCAGATAGCTGCTGAAACAAATGTTTTGTTGAAGTACCATGATGGCATAGGTCTGCAAACATTAGTTGGAGGCACGCGATTCAAAGAGGACCAGAAACGTCTAGAATCAAATCCATGCCAGATAATAGTTGCAACTCCTGGCAGGTTGCTGGACCACATTGAGAATAAGTCAGGCTTGTCGGTGCGATTGATGGGACTGAAAATGCTGATACTTGATGAAGCTGGCCACTTGCTAGACCTAGGATTTCGGAAGGATATAGAGAAAATTGTTGATTGTTTGCCTCGTCGAAGGCAGTCCTTGCTGTTTACTGTAACAATTCCGAAAGAGGTTCGCCGAATATCACAGCTTGTCTTGAAAAAGGACCATGCTTTTGTTGACACAGTGGGTTTAGGTTGTGTTGAAACTCATGATAAGGTTAAGCAGTCGTGTCTTGTTGAACCACATGAATTGCATTTTCAAATAGTGCACCAGCTTCTAATGGAGCATATCTCGCAATCACCTAATTATAAGGTTATTGTTTTCTGTACAACTGGAATGGTAACATCCCTCCTCTATCATGTTCTTCGTGAAATGAAAATGAATGTTAAGGAGATGCATTCCAGGAAGCCTCAACTCTATCGAACTCGTATCTCTGAGGAATTCAAGGTATCAAAACGGCTGATTCTTGTTACCTCTGATGTATCCGCACGTGGAATGAATTATCCTGATGTTACCTTGGTCATTCAGTCTGATTGTTGCCAGGTGGGTATTCCTTCTGACCGGGATCAATATATACATCGTCTTGGAAGAACGGGACGAGAAGGCAAAGAAGGACAAGGCATATTGTTACTTGCACCATGGGAGGAGTATTTTCTGGATGAATTAAAAGATTTGCCTGTTGAAAAATTTCCTACGCTGCGATTGGATCCAGGCACTAAACTTAAGATTGAGGATTCATTAGCCAAGATTGATGGTAGTGTCAAAGAAGCCGCCTTTCATGCTTGGCTTGGGTACTATAACTCGATCAGGGAAATTGGCAGGGATAAAACCACACTTGTTGAGCAAGCCAACCAATTTTGTCAATCAATTGGTTTGCAAAAACCTCCTTCTCTCTTTAGAAAGACAGCATTGAAGATGGGCTTGAGAGATATACCTGGCATAAGAATACGAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

764

Amino Acids

85.73

Weight (kDa)

9.35

Isoelectric Point (pI)

43.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012029)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63250 AT2G07750 AT5G08620
fragaria_vesca	FvH4_5g01920
malus_domestica	MD06G1077400.v1.1
prunus_persica	Prupe.5G095400_v2.0.a1 Prupe.5G095400_v2.0.a1 Prupe.5G095400_v2.0.a1
pyrus_communis	pycom06g07520
rosa_chinensis	RchiOBHm_Chr7g0198601
rosa_laevigata	RLG00000003858
rosa_multiflora	Rmu_sc0004229.1_g000005
rosa_roxburghii	Rroxscaffold_3G00257630
rosa_rugosa	Rorug07G0048400
rosa_samantha	Rh7AG171900 Rh7BG175300 Rh7CG181400 Rh7DG174400
rosa_wichuraiana	Rw7G015080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1644
Acc16I	TGCGCA	1 cut(s)	765
Acc36I	ACCTGC	2 cut(s)	760, 1269
AccB1I	GGYRCC	1 cut(s)	727
AccB7I	CCANNNNNTGG	1 cut(s)	395
AccBSI	CCGCTC	1 cut(s)	210
AccII	CGCG	1 cut(s)	1213
AciI	CCGC	9 cut(s)	6, 81, 84, 208, 426, 476, 559, 1821, 2106
AclWI	GGATC	4 cut(s)	7, 1908, 2036, 2049
AcoI	YGGCCR	1 cut(s)	1360
AcsI	RAATTY	6 cut(s)	496, 505, 643, 650, 1775, 2021
AcvI	CACGTG	1 cut(s)	1826
AcyI	GRCGYC	1 cut(s)	108
AfaI	GTAC	7 cut(s)	63, 624, 788, 945, 1172, 1663, 2129
AfiI	CCNNNNNNNGG	6 cut(s)	76, 80, 219, 220, 395, 1083
AflII	CTTAAG	1 cut(s)	2057
AgeI	ACCGGT	1 cut(s)	391
AjnI	CCWGG	5 cut(s)	1273, 1736, 1875, 2044, 2269
Alw21I	GWGCWC	2 cut(s)	303, 1605
Alw26I	GTCTC	4 cut(s)	27, 209, 842, 1095
Alw44I	GTGCAC	1 cut(s)	1601
AlwI	GGATC	4 cut(s)	7, 1908, 2036, 2049
AlwNI	CAGNNNCTG	1 cut(s)	1010
Ama87I	CYCGRG	1 cut(s)	100
AoxI	GGCC	6 cut(s)	86, 198, 222, 368, 383, 1360
ApaI	GGGCCC	1 cut(s)	90
ApaLI	GTGCAC	1 cut(s)	1601
ApeKI	GCWGC	6 cut(s)	766, 809, 953, 1022, 1145, 2032
ApoI	RAATTY	6 cut(s)	496, 505, 643, 650, 1775, 2021
ArsI	GACNNNNNNTTYG	4 cut(s)	584, 616, 1490, 1522
AsiGI	ACCGGT	1 cut(s)	391
Asp700I	GAANNNNTTC	1 cut(s)	2022
AspA2I	CCTAGG	1 cut(s)	1375
AspLEI	GCGC	4 cut(s)	132, 168, 341, 766
AspS9I	GGNCC	9 cut(s)	86, 87, 93, 199, 222, 368, 1225, 1288, 1498
AsuC2I	CCSGG	7 cut(s)	91, 101, 102, 221, 235, 274, 1898
AsuHPI	GGTGA	3 cut(s)	103, 626, 1626
AsuII	TTCGAA	1 cut(s)	647
AvaI	CYCGRG	1 cut(s)	100
AvaII	GGWCC	4 cut(s)	93, 1225, 1288, 1498
AvrII	CCTAGG	1 cut(s)	1375
AxyI	CCTNAGG	1 cut(s)	443
BaeGI	GKGCMC	4 cut(s)	90, 279, 732, 1605
BalI	TGGCCA	1 cut(s)	1362
BamHI	GGATCC	1 cut(s)	2041
BanI	GGYRCC	1 cut(s)	727
BanII	GRGCYC	1 cut(s)	90
BbrPI	CACGTG	1 cut(s)	1826
BbsI	GAAGAC	1 cut(s)	597
Bbv12I	GWGCWC	2 cut(s)	303, 1605
BbvI	GCAGC	6 cut(s)	778, 796, 940, 1034, 1132, 2019
BccI	CCATC	5 cut(s)	359, 1172, 1321, 2081, 2245
BceAI	ACGGC	2 cut(s)	537, 1808
BciT130I	CCWGG	5 cut(s)	1275, 1738, 1877, 2046, 2271
BciVI	GTATCC	1 cut(s)	1828
BclI	TGATCA	1 cut(s)	990
BcnI	CCSGG	7 cut(s)	91, 101, 102, 221, 235, 274, 1898
BcoDI	GTCTC	4 cut(s)	27, 209, 842, 1095
BfaI	CTAG	5 cut(s)	314, 1068, 1238, 1370, 1376
BfmI	CTRYAG	1 cut(s)	1020
BfoI	RGCGCY	1 cut(s)	169
BfrI	CTTAAG	1 cut(s)	2057
BfuAI	ACCTGC	2 cut(s)	760, 1269
BfuI	GTATCC	1 cut(s)	1828
BisI	GCNGC	8 cut(s)	82, 767, 810, 954, 1023, 1146, 2033, 2106
BlnI	CCTAGG	1 cut(s)	1375
BlsI	GCNGC	8 cut(s)	83, 768, 811, 955, 1024, 1147, 2034, 2107
Bme18I	GGWCC	4 cut(s)	93, 1225, 1288, 1498
BmeT110I	CYCGRG	1 cut(s)	100
BmgT120I	GGNCC	9 cut(s)	86, 87, 93, 199, 222, 368, 1225, 1288, 1498
BmiI	GGNNCC	4 cut(s)	88, 89, 729, 2043
BmsI	GCATC	2 cut(s)	973, 1719
BpiI	GAAGAC	1 cut(s)	597
BplI	GAGNNNNNCTC	2 cut(s)	1610, 1642
BpmI	CTGGAG	1 cut(s)	1077
Bpu14I	TTCGAA	1 cut(s)	647
BpuEI	CTTGAG	1 cut(s)	2278
BpuMI	CCSGG	7 cut(s)	91, 101, 102, 221, 235, 274, 1898
BsaAI	YACGTR	1 cut(s)	1826
BsaHI	GRCGYC	1 cut(s)	108
BsaJI	CCNNGG	7 cut(s)	75, 89, 100, 553, 1375, 1851, 1973
BsaWI	WCCGGW	1 cut(s)	391
Bsc4I	CCNNNNNNNGG	6 cut(s)	76, 80, 219, 220, 395, 1083
Bse118I	RCCGGY	2 cut(s)	381, 391
Bse1I	ACTGG	3 cut(s)	1015, 1094, 1672
Bse21I	CCTNAGG	1 cut(s)	443
BseBI	CCWGG	5 cut(s)	1275, 1738, 1877, 2046, 2271
BseDI	CCNNGG	7 cut(s)	75, 89, 100, 553, 1375, 1851, 1973
BseGI	GGATG	3 cut(s)	370, 1679, 1999
BseLI	CCNNNNNNNGG	6 cut(s)	76, 80, 219, 220, 395, 1083
BseMII	CTCAG	2 cut(s)	434, 1761
BseNI	ACTGG	3 cut(s)	1015, 1094, 1672
BseRI	GAGGAG	5 cut(s)	736, 764, 860, 1676, 1994
BseSI	GKGCMC	4 cut(s)	90, 279, 732, 1605
BseXI	GCAGC	6 cut(s)	778, 796, 940, 1034, 1132, 2019
Bsh1236I	CGCG	1 cut(s)	1213
Bsh1285I	CGRYCG	2 cut(s)	29, 322
BshFI	GGCC	6 cut(s)	88, 200, 224, 370, 385, 1362
BshNI	GGYRCC	1 cut(s)	727
BshTI	ACCGGT	1 cut(s)	391
BsiEI	CGRYCG	2 cut(s)	29, 322
BsiHKAI	GWGCWC	2 cut(s)	303, 1605
BsiHKCI	CYCGRG	1 cut(s)	100
BsiSI	CCGG	8 cut(s)	91, 101, 220, 234, 273, 382, 392, 1897
BslFI	GGGAC	2 cut(s)	1344, 1944
BslI	CCNNNNNNNGG	6 cut(s)	76, 80, 219, 220, 395, 1083
BsmAI	GTCTC	4 cut(s)	27, 209, 842, 1095
BsmBI	CGTCTC	1 cut(s)	209
BsmFI	GGGAC	2 cut(s)	1344, 1944
BsmI	GAATGC	1 cut(s)	1732
BsnI	GGCC	6 cut(s)	88, 200, 224, 370, 385, 1362
BsoBI	CYCGRG	1 cut(s)	100
Bsp119I	TTCGAA	1 cut(s)	647
Bsp120I	GGGCCC	1 cut(s)	86
Bsp1286I	GDGCHC	5 cut(s)	90, 279, 303, 732, 1605
Bsp1407I	TGTACA	1 cut(s)	1661
Bsp143I	GATC	7 cut(s)	12, 319, 416, 990, 1900, 2041, 2139
Bsp19I	CCATGG	2 cut(s)	75, 1973
BspACI	CCGC	9 cut(s)	6, 81, 84, 208, 426, 476, 559, 1821, 2106
BspANI	GGCC	6 cut(s)	88, 200, 224, 370, 385, 1362
BspCNI	CTCAG	2 cut(s)	435, 1762
BspFNI	CGCG	1 cut(s)	1213
BspHI	TCATGA	3 cut(s)	327, 466, 1543
BspLI	GGNNCC	4 cut(s)	88, 89, 729, 2043
BspMAI	CTGCAG	1 cut(s)	1024
BspMI	ACCTGC	2 cut(s)	760, 1269
BspPI	GGATC	4 cut(s)	7, 1908, 2036, 2049
BspT104I	TTCGAA	1 cut(s)	647
BspT107I	GGYRCC	1 cut(s)	727
BspTI	CTTAAG	1 cut(s)	2057
BsrBI	CCGCTC	1 cut(s)	210
BsrFI	RCCGGY	2 cut(s)	381, 391
BsrGI	TGTACA	1 cut(s)	1661
BsrI	ACTGG	3 cut(s)	1015, 1094, 1672
BssAI	RCCGGY	2 cut(s)	381, 391
BssECI	CCNNGG	7 cut(s)	75, 89, 100, 553, 1375, 1851, 1973
BssMI	GATC	7 cut(s)	12, 319, 416, 990, 1900, 2041, 2139
BssNI	GRCGYC	1 cut(s)	108
BssT1I	CCWWGG	4 cut(s)	75, 1375, 1851, 1973
Bst2UI	CCWGG	5 cut(s)	1275, 1738, 1877, 2046, 2271
Bst4CI	ACNGT	5 cut(s)	27, 435, 901, 1447, 1519
BstACI	GRCGYC	1 cut(s)	108
BstAFI	CTTAAG	1 cut(s)	2057
BstAPI	GCANNNNNTGC	1 cut(s)	1435
BstAUI	TGTACA	1 cut(s)	1661
BstBAI	YACGTR	1 cut(s)	1826
BstBI	TTCGAA	1 cut(s)	647
BstC8I	GCNNGC	7 cut(s)	56, 86, 134, 922, 1211, 1360, 2181
BstDEI	CTNAG	6 cut(s)	172, 443, 794, 857, 1062, 1770
BstDSI	CCRYGG	3 cut(s)	75, 553, 1973
BstEII	GGTNACC	1 cut(s)	421
BstF5I	GGATG	3 cut(s)	370, 1679, 1999
BstFNI	CGCG	1 cut(s)	1213
BstH2I	RGCGCY	1 cut(s)	169
BstHHI	GCGC	4 cut(s)	132, 168, 341, 766
BstKTI	GATC	7 cut(s)	15, 322, 419, 993, 1903, 2044, 2142
BstMAI	GTCTC	4 cut(s)	27, 209, 842, 1095
BstMBI	GATC	7 cut(s)	12, 319, 416, 990, 1900, 2041, 2139
BstMCI	CGRYCG	2 cut(s)	29, 322
BstMWI	GCNNNNNNNGC	5 cut(s)	230, 1046, 1435, 1627, 2114
BstNI	CCWGG	5 cut(s)	1275, 1738, 1877, 2046, 2271
BstNSI	RCATGY	1 cut(s)	136
BstPI	GGTNACC	1 cut(s)	421
BstSFI	CTRYAG	1 cut(s)	1020
BstSLI	GKGCMC	4 cut(s)	90, 279, 732, 1605
BstUI	CGCG	1 cut(s)	1213
BstV1I	GCAGC	6 cut(s)	778, 796, 940, 1034, 1132, 2019
BstV2I	GAAGAC	1 cut(s)	597
BstX2I	RGATCY	1 cut(s)	2041
BstYI	RGATCY	1 cut(s)	2041
Bsu36I	CCTNAGG	1 cut(s)	443
BsuI	GTATCC	1 cut(s)	1828
BsuRI	GGCC	6 cut(s)	88, 200, 224, 370, 385, 1362
BtgI	CCRYGG	3 cut(s)	75, 553, 1973
BtgZI	GCGATG	1 cut(s)	600
BtsCI	GGATG	3 cut(s)	370, 1679, 1999
BtsIMutI	CAGTG	3 cut(s)	908, 1008, 1524
BveI	ACCTGC	2 cut(s)	760, 1269
Cac8I	GCNNGC	7 cut(s)	56, 86, 134, 922, 1211, 1360, 2181
CaiI	CAGNNNCTG	1 cut(s)	1010
CciI	TCATGA	3 cut(s)	327, 466, 1543
CfoI	GCGC	4 cut(s)	132, 168, 341, 766
Cfr10I	RCCGGY	2 cut(s)	381, 391
Cfr13I	GGNCC	9 cut(s)	86, 87, 93, 199, 222, 368, 1225, 1288, 1498
Cfr9I	CCCGGG	1 cut(s)	100
CseI	GACGC	2 cut(s)	97, 413
Csp6I	GTAC	7 cut(s)	62, 623, 787, 944, 1171, 1662, 2128
CspAI	ACCGGT	1 cut(s)	391
CspCI	CAANNNNNGTGG	4 cut(s)	1566, 1601, 2155, 2190
CviQI	GTAC	7 cut(s)	62, 623, 787, 944, 1171, 1662, 2128
DdeI	CTNAG	6 cut(s)	172, 443, 794, 857, 1062, 1770
DpnI	GATC	7 cut(s)	14, 321, 418, 992, 1902, 2043, 2141
DpnII	GATC	7 cut(s)	12, 319, 416, 990, 1900, 2041, 2139
EaeI	YGGCCR	1 cut(s)	1360
Eco130I	CCWWGG	4 cut(s)	75, 1375, 1851, 1973
Eco24I	GRGCYC	1 cut(s)	90
Eco32I	GATATC	1 cut(s)	456
Eco47I	GGWCC	4 cut(s)	93, 1225, 1288, 1498
Eco72I	CACGTG	1 cut(s)	1826
Eco81I	CCTNAGG	1 cut(s)	443
Eco88I	CYCGRG	1 cut(s)	100
Eco91I	GGTNACC	1 cut(s)	421
EcoO109I	RGGNCCY	1 cut(s)	87
EcoO65I	GGTNACC	1 cut(s)	421
EcoRI	GAATTC	2 cut(s)	643, 1775
EcoRII	CCWGG	5 cut(s)	1273, 1736, 1875, 2044, 2269
EcoRV	GATATC	1 cut(s)	456
EcoT14I	CCWWGG	4 cut(s)	75, 1375, 1851, 1973
EcoT22I	ATGCAT	1 cut(s)	1734
EcoT38I	GRGCYC	1 cut(s)	90
ErhI	CCWWGG	4 cut(s)	75, 1375, 1851, 1973
Esp3I	CGTCTC	1 cut(s)	209
FalI	AAGNNNNNCTT	6 cut(s)	155, 187, 1295, 1327, 2240, 2272
FaqI	GGGAC	2 cut(s)	1344, 1944
FauI	CCCGC	2 cut(s)	77, 469
FbaI	TGATCA	1 cut(s)	990
Fnu4HI	GCNGC	8 cut(s)	82, 767, 810, 954, 1023, 1146, 2033, 2106
FokI	GGATG	3 cut(s)	377, 1666, 2006
FriOI	GRGCYC	1 cut(s)	90
Fsp4HI	GCNGC	8 cut(s)	82, 767, 810, 954, 1023, 1146, 2033, 2106
FspBI	CTAG	5 cut(s)	314, 1068, 1238, 1370, 1376
FspI	TGCGCA	1 cut(s)	765
GlaI	GCGC	4 cut(s)	131, 167, 340, 765
GluI	GCNGC	8 cut(s)	82, 767, 810, 954, 1023, 1146, 2033, 2106
GsuI	CTGGAG	1 cut(s)	1077
HaeII	RGCGCY	1 cut(s)	169
HaeIII	GGCC	6 cut(s)	88, 200, 224, 370, 385, 1362
HapII	CCGG	8 cut(s)	91, 101, 220, 234, 273, 382, 392, 1897
HgaI	GACGC	2 cut(s)	97, 413
HhaI	GCGC	4 cut(s)	132, 168, 341, 766
Hin1I	GRCGYC	1 cut(s)	108
Hin6I	GCGC	4 cut(s)	130, 166, 339, 764
HinP1I	GCGC	4 cut(s)	130, 166, 339, 764
HincII	GTYRAC	1 cut(s)	1513
HindII	GTYRAC	1 cut(s)	1513
HindIII	AAGCTT	1 cut(s)	44
HinfI	GANTC	8 cut(s)	593, 605, 617, 776, 1215, 1241, 1798, 2069
HpaII	CCGG	8 cut(s)	91, 101, 220, 234, 273, 382, 392, 1897
HphI	GGTGA	3 cut(s)	103, 626, 1626
Hpy166II	GTNNAC	3 cut(s)	1443, 1513, 1603
Hpy8I	GTNNAC	3 cut(s)	1443, 1513, 1603
Hpy99I	CGWCG	1 cut(s)	1425
HpyCH4III	ACNGT	5 cut(s)	27, 435, 901, 1447, 1519
HpyCH4IV	ACGT	2 cut(s)	1234, 1825
HpyF10VI	GCNNNNNNNGC	5 cut(s)	230, 1046, 1435, 1627, 2114
HpyF3I	CTNAG	6 cut(s)	172, 443, 794, 857, 1062, 1770
HpySE526I	ACGT	2 cut(s)	1234, 1825
Hsp92I	GRCGYC	1 cut(s)	108
HspAI	GCGC	4 cut(s)	130, 166, 339, 764
Ksp22I	TGATCA	1 cut(s)	990
Kzo9I	GATC	7 cut(s)	12, 319, 416, 990, 1900, 2041, 2139
LmnI	GCTCC	2 cut(s)	215, 1618
Lsp1109I	GCAGC	6 cut(s)	778, 796, 940, 1034, 1132, 2019
LweI	GCATC	2 cut(s)	973, 1719
MaeI	CTAG	5 cut(s)	314, 1068, 1238, 1370, 1376
MaeII	ACGT	2 cut(s)	1234, 1825
MaeIII	GTNAC	7 cut(s)	109, 421, 1447, 1675, 1804, 1846, 1962
MalI	GATC	7 cut(s)	14, 321, 418, 992, 1902, 2043, 2141
MbiI	CCGCTC	1 cut(s)	210
MboI	GATC	7 cut(s)	12, 319, 416, 990, 1900, 2041, 2139
MboII	GAAGA	6 cut(s)	356, 602, 721, 1691, 1935, 2260
MfeI	CAATTG	1 cut(s)	2202
MflI	RGATCY	1 cut(s)	2041
MhlI	GDGCHC	5 cut(s)	90, 279, 303, 732, 1605
MlsI	TGGCCA	1 cut(s)	1362
MluNI	TGGCCA	1 cut(s)	1362
MlyI	GAGTC	3 cut(s)	587, 626, 785
MmeI	TCCRAC	1 cut(s)	1183
Mox20I	TGGCCA	1 cut(s)	1362
Mph1103I	ATGCAT	1 cut(s)	1734
MroXI	GAANNNNTTC	1 cut(s)	2022
MscI	TGGCCA	1 cut(s)	1362
MseI	TTAA	7 cut(s)	306, 717, 735, 1554, 1722, 2000, 2058
Msp20I	TGGCCA	1 cut(s)	1362
MspCI	CTTAAG	1 cut(s)	2057
MspI	CCGG	8 cut(s)	91, 101, 220, 234, 273, 382, 392, 1897
MunI	CAATTG	1 cut(s)	2202
Mva1269I	GAATGC	1 cut(s)	1732
MvaI	CCWGG	5 cut(s)	1275, 1738, 1877, 2046, 2271
MvnI	CGCG	1 cut(s)	1213
MwoI	GCNNNNNNNGC	5 cut(s)	230, 1046, 1435, 1627, 2114
NciI	CCSGG	7 cut(s)	91, 101, 102, 221, 235, 274, 1898
NcoI	CCATGG	2 cut(s)	75, 1973
NdeII	GATC	7 cut(s)	12, 319, 416, 990, 1900, 2041, 2139
NlaIV	GGNNCC	4 cut(s)	88, 89, 729, 2043
NmuCI	GTSAC	1 cut(s)	109
NsbI	TGCGCA	1 cut(s)	765
NsiI	ATGCAT	1 cut(s)	1734
NspI	RCATGY	1 cut(s)	136
NspV	TTCGAA	1 cut(s)	647
PaeI	GCATGC	1 cut(s)	136
PagI	TCATGA	3 cut(s)	327, 466, 1543
PctI	GAATGC	1 cut(s)	1732
PdmI	GAANNNNTTC	1 cut(s)	2022
PfeI	GAWTC	5 cut(s)	605, 1215, 1241, 1798, 2069
PflMI	CCANNNNNTGG	1 cut(s)	395
PfoI	TCCNGGA	1 cut(s)	1736
PinAI	ACCGGT	1 cut(s)	391
PkrI	GCNGC	8 cut(s)	83, 768, 811, 955, 1024, 1147, 2034, 2107
Ple19I	CGATCG	1 cut(s)	322
PleI	GAGTC	3 cut(s)	587, 625, 784
PmaCI	CACGTG	1 cut(s)	1826
PmlI	CACGTG	1 cut(s)	1826
PpsI	GAGTC	3 cut(s)	587, 625, 784
Ppu21I	YACGTR	1 cut(s)	1826
PsiI	TTATAA	1 cut(s)	1644
Psp6I	CCWGG	5 cut(s)	1273, 1736, 1875, 2044, 2269
PspCI	CACGTG	1 cut(s)	1826
PspEI	GGTNACC	1 cut(s)	421
PspGI	CCWGG	5 cut(s)	1273, 1736, 1875, 2044, 2269
PspN4I	GGNNCC	4 cut(s)	88, 89, 729, 2043
PspOMI	GGGCCC	1 cut(s)	86
PspPI	GGNCC	9 cut(s)	86, 87, 93, 199, 222, 368, 1225, 1288, 1498
PstI	CTGCAG	1 cut(s)	1024
PstNI	CAGNNNCTG	1 cut(s)	1010
PsuI	RGATCY	1 cut(s)	2041
PvuI	CGATCG	1 cut(s)	322
RsaI	GTAC	7 cut(s)	63, 624, 788, 945, 1172, 1663, 2129
RsaNI	GTAC	7 cut(s)	62, 623, 787, 944, 1171, 1662, 2128
SaqAI	TTAA	7 cut(s)	306, 717, 735, 1554, 1722, 2000, 2058
SatI	GCNGC	8 cut(s)	82, 767, 810, 954, 1023, 1146, 2033, 2106
Sau3AI	GATC	7 cut(s)	12, 319, 416, 990, 1900, 2041, 2139
Sau96I	GGNCC	9 cut(s)	86, 87, 93, 199, 222, 368, 1225, 1288, 1498
SchI	GAGTC	3 cut(s)	587, 626, 785
SduI	GDGCHC	5 cut(s)	90, 279, 303, 732, 1605
SfaNI	GCATC	2 cut(s)	973, 1719
SfcI	CTRYAG	1 cut(s)	1020
SfuI	TTCGAA	1 cut(s)	647
SinI	GGWCC	4 cut(s)	93, 1225, 1288, 1498
SmaI	CCCGGG	1 cut(s)	102
SmlI	CTYRAG	2 cut(s)	2057, 2257
SmoI	CTYRAG	2 cut(s)	2057, 2257
SphI	GCATGC	1 cut(s)	136
SsiI	CCGC	9 cut(s)	6, 81, 84, 208, 426, 476, 559, 1821, 2106
SspMI	CTAG	5 cut(s)	314, 1068, 1238, 1370, 1376
StyI	CCWWGG	4 cut(s)	75, 1375, 1851, 1973
TaaI	ACNGT	5 cut(s)	27, 435, 901, 1447, 1519
TaiI	ACGT	2 cut(s)	1237, 1828
TatI	WGTACW	2 cut(s)	943, 1661
TauI	GCSGC	2 cut(s)	84, 2108
TfiI	GAWTC	5 cut(s)	605, 1215, 1241, 1798, 2069
Tru1I	TTAA	7 cut(s)	306, 717, 735, 1554, 1722, 2000, 2058
Tru9I	TTAA	7 cut(s)	306, 717, 735, 1554, 1722, 2000, 2058
TscAI	CASTG	3 cut(s)	915, 1015, 1524
TseFI	GTSAC	1 cut(s)	109
TseI	GCWGC	6 cut(s)	766, 809, 953, 1022, 1145, 2032
Tsp45I	GTSAC	1 cut(s)	109
TspGWI	ACGGA	2 cut(s)	424, 610
TspMI	CCCGGG	1 cut(s)	100
TspRI	CASTG	3 cut(s)	915, 1015, 1524
Van91I	CCANNNNNTGG	1 cut(s)	395
Vha464I	CTTAAG	1 cut(s)	2057
VneI	GTGCAC	1 cut(s)	1601
VpaK11BI	GGWCC	4 cut(s)	93, 1225, 1288, 1498
XapI	RAATTY	6 cut(s)	496, 505, 643, 650, 1775, 2021
XbaI	TCTAGA	1 cut(s)	1237
XceI	RCATGY	1 cut(s)	136
XmaI	CCCGGG	1 cut(s)	100
XmaJI	CCTAGG	1 cut(s)	1375
XmnI	GAANNNNTTC	1 cut(s)	2022
XspI	CTAG	5 cut(s)	314, 1068, 1238, 1370, 1376
Zsp2I	ATGCAT	1 cut(s)	1734

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.