Prupe.5G111000_v2.0.a1

Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
11536547 .. 11537960
1414 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G111000.1

Sequence Viewer

Length: 516 bp
ATGATTGCCAAAGTTACCAAACCCGGCAAGAGAGTCCGGGCTCACAAACCGTGTAAGAAGCTGGTGTTTTACTTCCACGACATTATTTACAACGGAAAGAATGCCAAGAATGCAACATCAGCCATTGTTGGAGCACCAGCTTGGGGAAACAGAACCATATTGGCAGGAAAAAGCTATTTCGGGAACATGGTTGTGCTTGATGATCCCATTACCTTAGACAATAATCTACACTCAACCCCAGTTGGTTGCGCACAAGGCTTCTACTTGTACGACAAGAAAGATATATTCACTGCTTGGCTTGGCTTCTCCTTTGTGTTTAACTCATCCAAACACAAGGGAAGCATCAACTTTGCTGGTGCTGATCCACTGATGAACAAAACCAGGGATATTTCAGTGATTGGCAGTACCGGCAACTTCTTCATGGCTCGAGGGATAGCCACTTTGATGACTGATGCATTCAAGGGGGAAGTGTACTTCCGGCTTCGCGCTGAGATAAATCTGTACGAGTGTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

172

Amino Acids

19.05

Weight (kDa)

9.63

Isoelectric Point (pI)

16.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 250
AccII CGCG 1 cut(s) 486
AclWI GGATC 2 cut(s) 197, 356
AfaI GTAC 4 cut(s) 269, 406, 473, 503
AfiI CCNNNNNNNGG 1 cut(s) 143
AgsI TTSAA 1 cut(s) 460
AjnI CCWGG 1 cut(s) 380
AluBI AGCT 3 cut(s) 61, 140, 174
AluI AGCT 3 cut(s) 61, 140, 174
Alw21I GWGCWC 1 cut(s) 136
AlwI GGATC 2 cut(s) 197, 356
Ama87I CYCGRG 1 cut(s) 426
AspLEI GCGC 2 cut(s) 251, 488
AsuC2I CCSGG 2 cut(s) 24, 38
AvaI CYCGRG 1 cut(s) 426
BanII GRGCYC 1 cut(s) 43
Bbv12I GWGCWC 1 cut(s) 136
BciT130I CCWGG 1 cut(s) 382
BcnI CCSGG 2 cut(s) 24, 38
Bme1390I CCNGG 3 cut(s) 24, 38, 382
BmeT110I CYCGRG 1 cut(s) 426
BmrFI CCNGG 3 cut(s) 24, 38, 382
BmrI ACTGGG 1 cut(s) 233
BmsI GCATC 2 cut(s) 351, 442
BmuI ACTGGG 1 cut(s) 233
BpuMI CCSGG 2 cut(s) 24, 38
BsaJI CCNNGG 1 cut(s) 381
Bsc4I CCNNNNNNNGG 1 cut(s) 143
Bse118I RCCGGY 1 cut(s) 407
Bse1I ACTGG 1 cut(s) 239
BseBI CCWGG 1 cut(s) 382
BseDI CCNNGG 1 cut(s) 381
BseGI GGATG 1 cut(s) 323
BseLI CCNNNNNNNGG 1 cut(s) 143
BseMII CTCAG 1 cut(s) 480
BseNI ACTGG 1 cut(s) 239
Bsh1236I CGCG 1 cut(s) 486
BsiHKAI GWGCWC 1 cut(s) 136
BsiHKCI CYCGRG 1 cut(s) 426
BsiSI CCGG 4 cut(s) 24, 37, 408, 478
BslI CCNNNNNNNGG 1 cut(s) 143
BsmI GAATGC 3 cut(s) 106, 115, 455
BsoBI CYCGRG 1 cut(s) 426
Bsp1286I GDGCHC 2 cut(s) 43, 136
Bsp143I GATC 2 cut(s) 202, 361
BspCNI CTCAG 1 cut(s) 481
BspFNI CGCG 1 cut(s) 486
BspPI GGATC 2 cut(s) 197, 356
BsrFI RCCGGY 1 cut(s) 407
BsrI ACTGG 1 cut(s) 239
BssAI RCCGGY 1 cut(s) 407
BssECI CCNNGG 1 cut(s) 381
BssMI GATC 2 cut(s) 202, 361
Bst2UI CCWGG 1 cut(s) 382
Bst4CI ACNGT 1 cut(s) 51
BstDEI CTNAG 2 cut(s) 214, 489
BstF5I GGATG 1 cut(s) 323
BstFNI CGCG 1 cut(s) 486
BstHHI GCGC 2 cut(s) 251, 488
BstKTI GATC 2 cut(s) 205, 364
BstMBI GATC 2 cut(s) 202, 361
BstMWI GCNNNNNNNGC 4 cut(s) 110, 119, 255, 408
BstNI CCWGG 1 cut(s) 382
BstSCI CCNGG 3 cut(s) 22, 36, 380
BstUI CGCG 1 cut(s) 486
BtsCI GGATG 1 cut(s) 323
BtsI GCAGTG 1 cut(s) 288
BtsIMutI CAGTG 3 cut(s) 288, 365, 399
CfoI GCGC 2 cut(s) 251, 488
Cfr10I RCCGGY 1 cut(s) 407
Csp6I GTAC 4 cut(s) 268, 405, 472, 502
CviAII CATG 2 cut(s) 187, 421
CviQI GTAC 4 cut(s) 268, 405, 472, 502
DdeI CTNAG 2 cut(s) 214, 489
DpnI GATC 2 cut(s) 204, 363
DpnII GATC 2 cut(s) 202, 361
Eco24I GRGCYC 1 cut(s) 43
Eco88I CYCGRG 1 cut(s) 426
EcoRII CCWGG 1 cut(s) 380
EcoT22I ATGCAT 1 cut(s) 457
EcoT38I GRGCYC 1 cut(s) 43
FaeI CATG 2 cut(s) 190, 424
FaiI YATR 4 cut(s) 158, 188, 284, 422
FatI CATG 2 cut(s) 186, 420
FokI GGATG 1 cut(s) 310
FriOI GRGCYC 1 cut(s) 43
FspI TGCGCA 1 cut(s) 250
GlaI GCGC 2 cut(s) 250, 487
HapII CCGG 4 cut(s) 24, 37, 408, 478
HhaI GCGC 2 cut(s) 251, 488
Hin1II CATG 2 cut(s) 190, 424
Hin6I GCGC 2 cut(s) 249, 486
HinP1I GCGC 2 cut(s) 249, 486
HinfI GANTC 1 cut(s) 33
HpaII CCGG 4 cut(s) 24, 37, 408, 478
Hpy166II GTNNAC 1 cut(s) 472
Hpy188III TCNNGA 1 cut(s) 181
Hpy8I GTNNAC 1 cut(s) 472
HpyCH4III ACNGT 1 cut(s) 51
HpyCH4V TGCA 2 cut(s) 113, 455
HpyF10VI GCNNNNNNNGC 4 cut(s) 110, 119, 255, 408
HpyF3I CTNAG 2 cut(s) 214, 489
Hsp92II CATG 2 cut(s) 190, 424
HspAI GCGC 2 cut(s) 249, 486
Kzo9I GATC 2 cut(s) 202, 361
LmnI GCTCC 1 cut(s) 131
LweI GCATC 2 cut(s) 351, 442
MaeIII GTNAC 1 cut(s) 13
MalI GATC 2 cut(s) 204, 363
MboI GATC 2 cut(s) 202, 361
MboII GAAGA 1 cut(s) 409
MhlI GDGCHC 2 cut(s) 43, 136
MlyI GAGTC 1 cut(s) 42
MmeI TCCRAC 1 cut(s) 109
MnlI CCTC 1 cut(s) 422
Mph1103I ATGCAT 1 cut(s) 457
MseI TTAA 1 cut(s) 318
MslI CAYNNNNRTG 2 cut(s) 191, 443
MspI CCGG 4 cut(s) 24, 37, 408, 478
MspR9I CCNGG 3 cut(s) 24, 38, 382
Mva1269I GAATGC 3 cut(s) 106, 115, 455
MvaI CCWGG 1 cut(s) 382
MvnI CGCG 1 cut(s) 486
MwoI GCNNNNNNNGC 4 cut(s) 110, 119, 255, 408
NciI CCSGG 2 cut(s) 24, 38
NdeII GATC 2 cut(s) 202, 361
NlaIII CATG 2 cut(s) 190, 424
NsbI TGCGCA 1 cut(s) 250
NsiI ATGCAT 1 cut(s) 457
PaeR7I CTCGAG 1 cut(s) 426
PctI GAATGC 3 cut(s) 106, 115, 455
PleI GAGTC 1 cut(s) 41
PpsI GAGTC 1 cut(s) 41
Psp6I CCWGG 1 cut(s) 380
PspGI CCWGG 1 cut(s) 380
PspXI VCTCGAGB 1 cut(s) 426
RsaI GTAC 4 cut(s) 269, 406, 473, 503
RsaNI GTAC 4 cut(s) 268, 405, 472, 502
RseI CAYNNNNRTG 2 cut(s) 191, 443
SaqAI TTAA 1 cut(s) 318
Sau3AI GATC 2 cut(s) 202, 361
SchI GAGTC 1 cut(s) 42
ScrFI CCNGG 3 cut(s) 24, 38, 382
SduI GDGCHC 2 cut(s) 43, 136
SetI ASST 4 cut(s) 63, 142, 176, 215
SfaNI GCATC 2 cut(s) 351, 442
Sfr274I CTCGAG 1 cut(s) 426
SlaI CTCGAG 1 cut(s) 426
SmiMI CAYNNNNRTG 2 cut(s) 191, 443
SmlI CTYRAG 1 cut(s) 426
SmoI CTYRAG 1 cut(s) 426
StyD4I CCNGG 3 cut(s) 22, 36, 380
TaaI ACNGT 1 cut(s) 51
TaqI TCGA 1 cut(s) 427
TatI WGTACW 1 cut(s) 471
Tru1I TTAA 1 cut(s) 318
Tru9I TTAA 1 cut(s) 318
TscAI CASTG 3 cut(s) 295, 372, 399
TspDTI ATGAA 2 cut(s) 386, 409
TspGWI ACGGA 1 cut(s) 108
TspRI CASTG 3 cut(s) 295, 372, 399
XhoI CTCGAG 1 cut(s) 426
Zsp2I ATGCAT 1 cut(s) 457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.