Prupe.5G111400_v2.0.a1

Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
11559928 .. 11560482
555 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G111400.1

Sequence Viewer

Length: 555 bp
ATGACAACTTTTTCACAAAAAAGTAGCTTCATTATTTTGGCCCTCATTATTTCCCCATCTGTTTCGGCAACCAGAGCCTCAAAATTCCAAGCAGAGAAGCCATGCAAAAGGATGGTGCTGTATTACCACGACAAGCTGTTCGACGGCACGGAGAAGGACAAGGCTAATGCGACGTCTGTAACCGCGGCCAATGCAAGCAAGCTCAGCGACACTAATTTTGGCATGCTTGTTGTTTTTAATGACCCCATTACCATCGACGACAAGTTTCATTCTCCACCCGTGGCAAGAGCTCAAGGCTTCTATTTCTACGACAGGAAAGACACCTACACGGCTTGGTTTGCGTACACTTTGGTGTTCAACTCAAGTGAGCACAAGGGCACGTTGAATATTATGGGCGCCGATTTGATGACGGAAAAAACTAGGGATCTTTCGGTTGTTGGAGGGACCGGAGACTTCTTCATGGCTAGAGGAATTGCCACATTTCAGACTGATACTTTGCAGGGTTTATATTATTTTCGTCTGAAGATGGACATCAAGTTGTATGAATGTTATTAG

Protein Analysis

185

Amino Acids

20.78

Weight (kDa)

8.43

Isoelectric Point (pI)

30.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 176
AccB1I GGYRCC 1 cut(s) 395
AccII CGCG 1 cut(s) 185
AciI CCGC 2 cut(s) 183, 185
AclWI GGATC 1 cut(s) 432
AcoI YGGCCR 1 cut(s) 186
AcsI RAATTY 1 cut(s) 83
AcuI CTGAAG 1 cut(s) 542
AcyI GRCGYC 2 cut(s) 173, 396
AfaI GTAC 1 cut(s) 344
AgsI TTSAA 2 cut(s) 358, 385
AleI CACNNNNGTG 1 cut(s) 350
AluBI AGCT 4 cut(s) 27, 136, 202, 290
AluI AGCT 4 cut(s) 27, 136, 202, 290
Alw21I GWGCWC 2 cut(s) 292, 372
Alw26I GTCTC 1 cut(s) 444
AlwI GGATC 1 cut(s) 432
AoxI GGCC 2 cut(s) 39, 186
ApoI RAATTY 1 cut(s) 83
ArsI GACNNNNNNTTYG 6 cut(s) 122, 154, 200, 232, 478, 510
AspLEI GCGC 1 cut(s) 398
AspS9I GGNCC 2 cut(s) 40, 444
AvaII GGWCC 1 cut(s) 444
BaeGI GKGCMC 1 cut(s) 380
BanI GGYRCC 1 cut(s) 395
BanII GRGCYC 1 cut(s) 292
Bbv12I GWGCWC 2 cut(s) 292, 372
BccI CCATC 4 cut(s) 64, 106, 260, 520
BceAI ACGGC 2 cut(s) 160, 345
BcoDI GTCTC 1 cut(s) 444
BfaI CTAG 2 cut(s) 420, 465
BfoI RGCGCY 1 cut(s) 399
BisI GCNGC 1 cut(s) 186
BlpI GCTNAGC 1 cut(s) 203
BlsI GCNGC 1 cut(s) 187
Bme18I GGWCC 1 cut(s) 444
BmgT120I GGNCC 2 cut(s) 40, 444
BmiI GGNNCC 2 cut(s) 397, 445
Bpu1102I GCTNAGC 1 cut(s) 203
BpuEI CTTGAG 2 cut(s) 276, 346
BsaBI GATNNNNATC 1 cut(s) 530
BsaHI GRCGYC 2 cut(s) 173, 396
BsaJI CCNNGG 2 cut(s) 183, 279
BsaWI WCCGGW 1 cut(s) 446
Bse8I GATNNNNATC 1 cut(s) 530
BseDI CCNNGG 2 cut(s) 183, 279
BseGI GGATG 1 cut(s) 117
BseJI GATNNNNATC 1 cut(s) 530
BseMII CTCAG 1 cut(s) 217
BseSI GKGCMC 1 cut(s) 380
Bsh1236I CGCG 1 cut(s) 185
BshFI GGCC 2 cut(s) 41, 188
BshNI GGYRCC 1 cut(s) 395
BsiHKAI GWGCWC 2 cut(s) 292, 372
BsiSI CCGG 1 cut(s) 447
BslFI GGGAC 1 cut(s) 457
BsmAI GTCTC 1 cut(s) 444
BsmFI GGGAC 1 cut(s) 457
BsnI GGCC 2 cut(s) 41, 188
Bsp1286I GDGCHC 3 cut(s) 292, 372, 380
Bsp143I GATC 1 cut(s) 424
Bsp1720I GCTNAGC 1 cut(s) 203
BspACI CCGC 2 cut(s) 183, 185
BspANI GGCC 2 cut(s) 41, 188
BspCNI CTCAG 1 cut(s) 216
BspFNI CGCG 1 cut(s) 185
BspLI GGNNCC 2 cut(s) 397, 445
BspPI GGATC 1 cut(s) 432
BspT107I GGYRCC 1 cut(s) 395
BssECI CCNNGG 2 cut(s) 183, 279
BssMI GATC 1 cut(s) 424
BssNI GRCGYC 2 cut(s) 173, 396
BstACI GRCGYC 2 cut(s) 173, 396
BstC8I GCNNGC 3 cut(s) 196, 200, 224
BstDEI CTNAG 1 cut(s) 203
BstDSI CCRYGG 2 cut(s) 183, 279
BstF5I GGATG 1 cut(s) 117
BstFNI CGCG 1 cut(s) 185
BstH2I RGCGCY 1 cut(s) 399
BstHHI GCGC 1 cut(s) 398
BstKTI GATC 1 cut(s) 427
BstMAI GTCTC 1 cut(s) 444
BstMBI GATC 1 cut(s) 424
BstMWI GCNNNNNNNGC 4 cut(s) 74, 191, 204, 338
BstNSI RCATGY 1 cut(s) 226
BstSLI GKGCMC 1 cut(s) 380
BstUI CGCG 1 cut(s) 185
BstX2I RGATCY 1 cut(s) 424
BstYI RGATCY 1 cut(s) 424
BsuRI GGCC 2 cut(s) 41, 188
BtgI CCRYGG 2 cut(s) 183, 279
BtsCI GGATG 1 cut(s) 117
Cac8I GCNNGC 3 cut(s) 196, 200, 224
CfoI GCGC 1 cut(s) 398
Cfr13I GGNCC 2 cut(s) 40, 444
Cfr42I CCGCGG 1 cut(s) 186
Csp6I GTAC 1 cut(s) 343
CviAII CATG 3 cut(s) 102, 223, 460
CviQI GTAC 1 cut(s) 343
DdeI CTNAG 1 cut(s) 203
DinI GGCGCC 1 cut(s) 397
DpnI GATC 1 cut(s) 426
DpnII GATC 1 cut(s) 424
EaeI YGGCCR 1 cut(s) 186
Ecl136II GAGCTC 1 cut(s) 290
Eco24I GRGCYC 1 cut(s) 292
Eco47I GGWCC 1 cut(s) 444
Eco53kI GAGCTC 1 cut(s) 290
Eco57I CTGAAG 1 cut(s) 542
EcoICRI GAGCTC 1 cut(s) 290
EcoT38I GRGCYC 1 cut(s) 292
EgeI GGCGCC 1 cut(s) 397
EheI GGCGCC 1 cut(s) 397
FaeI CATG 3 cut(s) 105, 226, 463
FaiI YATR 6 cut(s) 103, 224, 392, 461, 508, 543
FaqI GGGAC 1 cut(s) 457
FatI CATG 3 cut(s) 101, 222, 459
Fnu4HI GCNGC 1 cut(s) 186
FokI GGATG 1 cut(s) 124
FriOI GRGCYC 1 cut(s) 292
Fsp4HI GCNGC 1 cut(s) 186
FspBI CTAG 2 cut(s) 420, 465
GlaI GCGC 1 cut(s) 397
GluI GCNGC 1 cut(s) 186
HaeII RGCGCY 1 cut(s) 399
HaeIII GGCC 2 cut(s) 41, 188
HapII CCGG 1 cut(s) 447
HhaI GCGC 1 cut(s) 398
Hin1I GRCGYC 2 cut(s) 173, 396
Hin1II CATG 3 cut(s) 105, 226, 463
Hin6I GCGC 1 cut(s) 396
HinP1I GCGC 1 cut(s) 396
HpaII CCGG 1 cut(s) 447
Hpy166II GTNNAC 1 cut(s) 345
Hpy188I TCNGA 2 cut(s) 486, 522
Hpy8I GTNNAC 1 cut(s) 345
Hpy99I CGWCG 3 cut(s) 146, 175, 260
HpyAV CCTTC 1 cut(s) 148
HpyCH4IV ACGT 2 cut(s) 173, 380
HpyCH4V TGCA 3 cut(s) 105, 194, 499
HpyF10VI GCNNNNNNNGC 4 cut(s) 74, 191, 204, 338
HpyF3I CTNAG 1 cut(s) 203
HpySE526I ACGT 2 cut(s) 173, 380
Hsp92I GRCGYC 2 cut(s) 173, 396
Hsp92II CATG 3 cut(s) 105, 226, 463
HspAI GCGC 1 cut(s) 396
KasI GGCGCC 1 cut(s) 395
KspI CCGCGG 1 cut(s) 186
Kzo9I GATC 1 cut(s) 424
LpnPI CCDG 4 cut(s) 85, 298, 460, 485
MaeI CTAG 2 cut(s) 420, 465
MaeII ACGT 2 cut(s) 173, 380
MaeIII GTNAC 1 cut(s) 178
MalI GATC 1 cut(s) 426
MboI GATC 1 cut(s) 424
MboII GAAGA 2 cut(s) 448, 535
MflI RGATCY 1 cut(s) 424
MhlI GDGCHC 3 cut(s) 292, 372, 380
MluCI AATT 3 cut(s) 83, 214, 471
Mly113I GGCGCC 1 cut(s) 396
MmeI TCCRAC 1 cut(s) 418
MnlI CCTC 4 cut(s) 53, 88, 434, 461
MseI TTAA 1 cut(s) 237
MslI CAYNNNNRTG 1 cut(s) 350
MspA1I CMGCKG 1 cut(s) 185
MspI CCGG 1 cut(s) 447
MvnI CGCG 1 cut(s) 185
MwoI GCNNNNNNNGC 4 cut(s) 74, 191, 204, 338
NarI GGCGCC 1 cut(s) 396
NdeII GATC 1 cut(s) 424
NlaIII CATG 3 cut(s) 105, 226, 463
NlaIV GGNNCC 2 cut(s) 397, 445
NspI RCATGY 1 cut(s) 226
OliI CACNNNNGTG 1 cut(s) 350
PaeI GCATGC 1 cut(s) 226
PkrI GCNGC 1 cut(s) 187
PluTI GGCGCC 1 cut(s) 399
Psp124BI GAGCTC 1 cut(s) 292
PspN4I GGNNCC 2 cut(s) 397, 445
PspPI GGNCC 2 cut(s) 40, 444
PsuI RGATCY 1 cut(s) 424
RsaI GTAC 1 cut(s) 344
RsaNI GTAC 1 cut(s) 343
RseI CAYNNNNRTG 1 cut(s) 350
SacI GAGCTC 1 cut(s) 292
SacII CCGCGG 1 cut(s) 186
SaqAI TTAA 1 cut(s) 237
SatI GCNGC 1 cut(s) 186
Sau3AI GATC 1 cut(s) 424
Sau96I GGNCC 2 cut(s) 40, 444
SduI GDGCHC 3 cut(s) 292, 372, 380
SetI ASST 7 cut(s) 29, 138, 176, 204, 292, 326, 383
SfoI GGCGCC 1 cut(s) 397
Sfr303I CCGCGG 1 cut(s) 186
SgrBI CCGCGG 1 cut(s) 186
SinI GGWCC 1 cut(s) 444
SmiMI CAYNNNNRTG 1 cut(s) 350
SmlI CTYRAG 2 cut(s) 291, 361
SmoI CTYRAG 2 cut(s) 291, 361
SphI GCATGC 1 cut(s) 226
Sse9I AATT 3 cut(s) 83, 214, 471
SsiI CCGC 2 cut(s) 183, 185
SspDI GGCGCC 1 cut(s) 395
SspI AATATT 1 cut(s) 388
SspMI CTAG 2 cut(s) 420, 465
SstI GAGCTC 1 cut(s) 292
TaiI ACGT 2 cut(s) 176, 383
TaqI TCGA 2 cut(s) 141, 255
TasI AATT 3 cut(s) 83, 214, 471
TauI GCSGC 1 cut(s) 188
Tru1I TTAA 1 cut(s) 237
Tru9I TTAA 1 cut(s) 237
TspDTI ATGAA 3 cut(s) 19, 257, 448
TspGWI ACGGA 2 cut(s) 164, 425
VpaK11BI GGWCC 1 cut(s) 444
XapI RAATTY 1 cut(s) 83
XceI RCATGY 1 cut(s) 226
XspI CTAG 2 cut(s) 420, 465
ZraI GACGTC 1 cut(s) 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.