ubiquitin-protein transferase activity
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g04580 |
| malus_domestica | MD06G1106800.v1.1 MD14G1128800.v1.1 |
| prunus_persica | Prupe.5G120000_v2.0.a1 |
| pyrus_communis | pycom06g10100 |
| rosa_chinensis | RchiOBHm_Chr7g0194801 RchiOBHm_Chr7g0194811 |
| rosa_laevigata | RLG00000004167 |
| rosa_multiflora | Rmu_co8285291.1_g000001 Rmu_sc0006960.1_g000001 Rmu_sc0036266.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00260970 |
| rosa_rugosa | Rorug07G0018500.1 |
| rosa_samantha | Rh7AG146200 Rh7BG146200 Rh7CG150100 Rh7DG147500 |
| rosa_wichuraiana | Rw7G012480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 410 |
| AccI | GTMKAC | 2 cut(s) | 506, 1092 |
| AciI | CCGC | 7 cut(s) | 112, 355, 447, 475, 834, 859, 906 |
| AclWI | GGATC | 1 cut(s) | 719 |
| AcoI | YGGCCR | 1 cut(s) | 423 |
| AcuI | CTGAAG | 2 cut(s) | 113, 485 |
| AcyI | GRCGYC | 1 cut(s) | 407 |
| AfaI | GTAC | 5 cut(s) | 377, 488, 767, 950, 1028 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 426, 1036, 1131 |
| AflIII | ACRYGT | 1 cut(s) | 378 |
| AgsI | TTSAA | 3 cut(s) | 197, 1176, 1191 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 107 |
| AjnI | CCWGG | 1 cut(s) | 425 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 55, 87 |
| AluBI | AGCT | 6 cut(s) | 16, 90, 324, 334, 590, 1154 |
| AluI | AGCT | 6 cut(s) | 16, 90, 324, 334, 590, 1154 |
| Alw21I | GWGCWC | 1 cut(s) | 18 |
| AlwI | GGATC | 1 cut(s) | 719 |
| Ama87I | CYCGRG | 1 cut(s) | 794 |
| AoxI | GGCC | 3 cut(s) | 347, 423, 922 |
| ApeKI | GCWGC | 5 cut(s) | 5, 90, 321, 590, 901 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 308, 340 |
| AspS9I | GGNCC | 3 cut(s) | 101, 877, 922 |
| AsuC2I | CCSGG | 3 cut(s) | 422, 795, 796 |
| AsuHPI | GGTGA | 6 cut(s) | 461, 510, 522, 571, 1034, 1131 |
| AvaI | CYCGRG | 1 cut(s) | 794 |
| AvaII | GGWCC | 2 cut(s) | 101, 877 |
| AxyI | CCTNAGG | 2 cut(s) | 399, 729 |
| BaeGI | GKGCMC | 1 cut(s) | 1124 |
| BanII | GRGCYC | 2 cut(s) | 18, 1151 |
| BauI | CACGAG | 2 cut(s) | 175, 343 |
| BbsI | GAAGAC | 3 cut(s) | 740, 1164, 1173 |
| Bbv12I | GWGCWC | 1 cut(s) | 18 |
| BbvCI | CCTCAGC | 1 cut(s) | 443 |
| BbvI | GCAGC | 4 cut(s) | 77, 333, 577, 913 |
| BccI | CCATC | 2 cut(s) | 541, 1210 |
| BceAI | ACGGC | 4 cut(s) | 334, 334, 525, 784 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 217, 251, 943, 977 |
| BciT130I | CCWGG | 1 cut(s) | 427 |
| BcnI | CCSGG | 3 cut(s) | 422, 795, 796 |
| BfaI | CTAG | 5 cut(s) | 222, 314, 818, 965, 1083 |
| BisI | GCNGC | 7 cut(s) | 6, 91, 322, 591, 835, 859, 902 |
| BlpI | GCTNAGC | 1 cut(s) | 1150 |
| BlsI | GCNGC | 7 cut(s) | 7, 92, 323, 592, 836, 860, 903 |
| Bme1390I | CCNGG | 4 cut(s) | 422, 427, 795, 796 |
| Bme18I | GGWCC | 2 cut(s) | 101, 877 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 107 |
| BmeT110I | CYCGRG | 1 cut(s) | 794 |
| BmgT120I | GGNCC | 3 cut(s) | 101, 877, 922 |
| BmiI | GGNNCC | 2 cut(s) | 513, 579 |
| BmrFI | CCNGG | 4 cut(s) | 422, 427, 795, 796 |
| BmsI | GCATC | 3 cut(s) | 366, 607, 816 |
| BpiI | GAAGAC | 3 cut(s) | 740, 1164, 1173 |
| Bpu10I | CCTNAGC | 1 cut(s) | 443 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1150 |
| BpuEI | CTTGAG | 1 cut(s) | 70 |
| BpuMI | CCSGG | 3 cut(s) | 422, 795, 796 |
| BsaHI | GRCGYC | 1 cut(s) | 407 |
| BsaJI | CCNNGG | 4 cut(s) | 420, 794, 811, 1035 |
| BsaWI | WCCGGW | 1 cut(s) | 1141 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 673, 703 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 426, 1036, 1131 |
| Bse1I | ACTGG | 1 cut(s) | 675 |
| Bse21I | CCTNAGG | 2 cut(s) | 399, 729 |
| BseBI | CCWGG | 1 cut(s) | 427 |
| BseDI | CCNNGG | 4 cut(s) | 420, 794, 811, 1035 |
| BseGI | GGATG | 2 cut(s) | 357, 807 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 426, 1036, 1131 |
| BseMII | CTCAG | 5 cut(s) | 413, 457, 911, 1037, 1164 |
| BseNI | ACTGG | 1 cut(s) | 675 |
| BseRI | GAGGAG | 1 cut(s) | 326 |
| BseSI | GKGCMC | 1 cut(s) | 1124 |
| BseXI | GCAGC | 4 cut(s) | 77, 333, 577, 913 |
| Bsh1285I | CGRYCG | 1 cut(s) | 479 |
| BshFI | GGCC | 3 cut(s) | 349, 425, 924 |
| BsiEI | CGRYCG | 1 cut(s) | 479 |
| BsiHKAI | GWGCWC | 1 cut(s) | 18 |
| BsiHKCI | CYCGRG | 1 cut(s) | 794 |
| BsiSI | CCGG | 7 cut(s) | 124, 145, 422, 581, 795, 1132, 1142 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 426, 1036, 1131 |
| BsmI | GAATGC | 1 cut(s) | 1117 |
| BsnI | GGCC | 3 cut(s) | 349, 425, 924 |
| BsoBI | CYCGRG | 1 cut(s) | 794 |
| Bsp1286I | GDGCHC | 3 cut(s) | 18, 1124, 1151 |
| Bsp1407I | TGTACA | 1 cut(s) | 375 |
| Bsp143I | GATC | 4 cut(s) | 42, 259, 289, 724 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1150 |
| BspACI | CCGC | 7 cut(s) | 112, 355, 447, 475, 834, 859, 906 |
| BspANI | GGCC | 3 cut(s) | 349, 425, 924 |
| BspCNI | CTCAG | 5 cut(s) | 412, 456, 910, 1038, 1163 |
| BspLI | GGNNCC | 2 cut(s) | 513, 579 |
| BspPI | GGATC | 1 cut(s) | 719 |
| BspQI | GCTCTTC | 1 cut(s) | 23 |
| BsrGI | TGTACA | 1 cut(s) | 375 |
| BsrI | ACTGG | 1 cut(s) | 675 |
| BssECI | CCNNGG | 4 cut(s) | 420, 794, 811, 1035 |
| BssMI | GATC | 4 cut(s) | 42, 259, 289, 724 |
| BssNI | GRCGYC | 1 cut(s) | 407 |
| BssSI | CACGAG | 2 cut(s) | 175, 343 |
| BssT1I | CCWWGG | 2 cut(s) | 811, 1035 |
| Bst2BI | CACGAG | 2 cut(s) | 175, 343 |
| Bst2UI | CCWGG | 1 cut(s) | 427 |
| Bst4CI | ACNGT | 4 cut(s) | 109, 463, 522, 932 |
| Bst6I | CTCTTC | 1 cut(s) | 23 |
| BstACI | GRCGYC | 1 cut(s) | 407 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 590 |
| BstAUI | TGTACA | 1 cut(s) | 375 |
| BstC8I | GCNNGC | 2 cut(s) | 395, 906 |
| BstDEI | CTNAG | 6 cut(s) | 399, 443, 729, 897, 1046, 1150 |
| BstF5I | GGATG | 2 cut(s) | 357, 807 |
| BstKTI | GATC | 4 cut(s) | 45, 262, 292, 727 |
| BstMBI | GATC | 4 cut(s) | 42, 259, 289, 724 |
| BstMCI | CGRYCG | 1 cut(s) | 479 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 590, 1128 |
| BstNI | CCWGG | 1 cut(s) | 427 |
| BstSCI | CCNGG | 4 cut(s) | 420, 425, 793, 794 |
| BstSLI | GKGCMC | 1 cut(s) | 1124 |
| BstV1I | GCAGC | 4 cut(s) | 77, 333, 577, 913 |
| BstV2I | GAAGAC | 3 cut(s) | 740, 1164, 1173 |
| Bsu36I | CCTNAGG | 2 cut(s) | 399, 729 |
| BsuRI | GGCC | 3 cut(s) | 349, 425, 924 |
| BtgZI | GCGATG | 1 cut(s) | 1188 |
| BtsCI | GGATG | 2 cut(s) | 357, 807 |
| BtsIMutI | CAGTG | 2 cut(s) | 299, 682 |
| Cac8I | GCNNGC | 2 cut(s) | 395, 906 |
| Cfr13I | GGNCC | 3 cut(s) | 101, 877, 922 |
| Cfr9I | CCCGGG | 1 cut(s) | 794 |
| CpoI | CGGWCCG | 1 cut(s) | 101 |
| Csp6I | GTAC | 5 cut(s) | 376, 487, 766, 949, 1027 |
| CspI | CGGWCCG | 1 cut(s) | 101 |
| CviAII | CATG | 2 cut(s) | 874, 1079 |
| CviQI | GTAC | 5 cut(s) | 376, 487, 766, 949, 1027 |
| DdeI | CTNAG | 6 cut(s) | 399, 443, 729, 897, 1046, 1150 |
| DpnI | GATC | 4 cut(s) | 44, 261, 291, 726 |
| DpnII | GATC | 4 cut(s) | 42, 259, 289, 724 |
| DriI | GACNNNNNGTC | 1 cut(s) | 107 |
| EaeI | YGGCCR | 1 cut(s) | 423 |
| Eam1104I | CTCTTC | 1 cut(s) | 23 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 107 |
| EarI | CTCTTC | 1 cut(s) | 23 |
| Ecl136II | GAGCTC | 1 cut(s) | 16 |
| Eco130I | CCWWGG | 2 cut(s) | 811, 1035 |
| Eco24I | GRGCYC | 2 cut(s) | 18, 1151 |
| Eco47I | GGWCC | 2 cut(s) | 101, 877 |
| Eco53kI | GAGCTC | 1 cut(s) | 16 |
| Eco57I | CTGAAG | 2 cut(s) | 113, 485 |
| Eco81I | CCTNAGG | 2 cut(s) | 399, 729 |
| Eco88I | CYCGRG | 1 cut(s) | 794 |
| EcoICRI | GAGCTC | 1 cut(s) | 16 |
| EcoRII | CCWGG | 1 cut(s) | 425 |
| EcoT14I | CCWWGG | 2 cut(s) | 811, 1035 |
| EcoT22I | ATGCAT | 1 cut(s) | 809 |
| EcoT38I | GRGCYC | 2 cut(s) | 18, 1151 |
| ErhI | CCWWGG | 2 cut(s) | 811, 1035 |
| FaeI | CATG | 2 cut(s) | 877, 1082 |
| FatI | CATG | 2 cut(s) | 873, 1078 |
| FauI | CCCGC | 1 cut(s) | 913 |
| FauNDI | CATATG | 1 cut(s) | 1013 |
| FblI | GTMKAC | 2 cut(s) | 506, 1092 |
| Fnu4HI | GCNGC | 7 cut(s) | 6, 91, 322, 591, 835, 859, 902 |
| FokI | GGATG | 2 cut(s) | 344, 794 |
| FriOI | GRGCYC | 2 cut(s) | 18, 1151 |
| Fsp4HI | GCNGC | 7 cut(s) | 6, 91, 322, 591, 835, 859, 902 |
| FspBI | CTAG | 5 cut(s) | 222, 314, 818, 965, 1083 |
| GluI | GCNGC | 7 cut(s) | 6, 91, 322, 591, 835, 859, 902 |
| HaeIII | GGCC | 3 cut(s) | 349, 425, 924 |
| HapII | CCGG | 7 cut(s) | 124, 145, 422, 581, 795, 1132, 1142 |
| Hin1I | GRCGYC | 1 cut(s) | 407 |
| Hin1II | CATG | 2 cut(s) | 877, 1082 |
| HincII | GTYRAC | 3 cut(s) | 280, 639, 648 |
| HindII | GTYRAC | 3 cut(s) | 280, 639, 648 |
| HinfI | GANTC | 3 cut(s) | 454, 944, 973 |
| HpaII | CCGG | 7 cut(s) | 124, 145, 422, 581, 795, 1132, 1142 |
| HphI | GGTGA | 6 cut(s) | 461, 510, 522, 571, 1034, 1131 |
| Hpy166II | GTNNAC | 6 cut(s) | 280, 378, 507, 639, 648, 1093 |
| Hpy188I | TCNGA | 4 cut(s) | 132, 711, 724, 978 |
| Hpy188III | TCNNGA | 2 cut(s) | 480, 543 |
| Hpy8I | GTNNAC | 6 cut(s) | 280, 378, 507, 639, 648, 1093 |
| Hpy99I | CGWCG | 4 cut(s) | 409, 412, 526, 529 |
| HpyAV | CCTTC | 4 cut(s) | 19, 203, 620, 1176 |
| HpyCH4III | ACNGT | 4 cut(s) | 109, 463, 522, 932 |
| HpyCH4IV | ACGT | 3 cut(s) | 380, 407, 1118 |
| HpyCH4V | TGCA | 6 cut(s) | 161, 180, 761, 807, 1065, 1115 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 590, 1128 |
| HpyF3I | CTNAG | 6 cut(s) | 399, 443, 729, 897, 1046, 1150 |
| HpySE526I | ACGT | 3 cut(s) | 380, 407, 1118 |
| Hsp92I | GRCGYC | 1 cut(s) | 407 |
| Hsp92II | CATG | 2 cut(s) | 877, 1082 |
| Kzo9I | GATC | 4 cut(s) | 42, 259, 289, 724 |
| LguI | GCTCTTC | 1 cut(s) | 23 |
| LmnI | GCTCC | 3 cut(s) | 339, 517, 1013 |
| Lsp1109I | GCAGC | 4 cut(s) | 77, 333, 577, 913 |
| LweI | GCATC | 3 cut(s) | 366, 607, 816 |
| MaeI | CTAG | 5 cut(s) | 222, 314, 818, 965, 1083 |
| MaeII | ACGT | 3 cut(s) | 380, 407, 1118 |
| MaeIII | GTNAC | 4 cut(s) | 516, 528, 1137, 1159 |
| MalI | GATC | 4 cut(s) | 44, 261, 291, 726 |
| MboI | GATC | 4 cut(s) | 42, 259, 289, 724 |
| MhlI | GDGCHC | 3 cut(s) | 18, 1124, 1151 |
| MluCI | AATT | 2 cut(s) | 493, 599 |
| MlyI | GAGTC | 1 cut(s) | 982 |
| MmeI | TCCRAC | 4 cut(s) | 86, 163, 956, 959 |
| Mph1103I | ATGCAT | 1 cut(s) | 809 |
| MseI | TTAA | 1 cut(s) | 695 |
| MslI | CAYNNNNRTG | 1 cut(s) | 782 |
| MspA1I | CMGCKG | 1 cut(s) | 447 |
| MspI | CCGG | 7 cut(s) | 124, 145, 422, 581, 795, 1132, 1142 |
| MspR9I | CCNGG | 4 cut(s) | 422, 427, 795, 796 |
| Mva1269I | GAATGC | 1 cut(s) | 1117 |
| MvaI | CCWGG | 1 cut(s) | 427 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 590, 1128 |
| NciI | CCSGG | 3 cut(s) | 422, 795, 796 |
| NdeI | CATATG | 1 cut(s) | 1013 |
| NdeII | GATC | 4 cut(s) | 42, 259, 289, 724 |
| NlaIII | CATG | 2 cut(s) | 877, 1082 |
| NlaIV | GGNNCC | 2 cut(s) | 513, 579 |
| NmuCI | GTSAC | 3 cut(s) | 516, 528, 1137 |
| NsiI | ATGCAT | 1 cut(s) | 809 |
| PciSI | GCTCTTC | 1 cut(s) | 23 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 324, 401, 533 |
| PctI | GAATGC | 1 cut(s) | 1117 |
| PfeI | GAWTC | 2 cut(s) | 454, 944 |
| PflFI | GACNNNGTC | 1 cut(s) | 643 |
| PkrI | GCNGC | 7 cut(s) | 7, 92, 323, 592, 836, 860, 903 |
| PleI | GAGTC | 1 cut(s) | 981 |
| PpsI | GAGTC | 1 cut(s) | 981 |
| Psp124BI | GAGCTC | 1 cut(s) | 18 |
| Psp6I | CCWGG | 1 cut(s) | 425 |
| PspGI | CCWGG | 1 cut(s) | 425 |
| PspN4I | GGNNCC | 2 cut(s) | 513, 579 |
| PspPI | GGNCC | 3 cut(s) | 101, 877, 922 |
| PsyI | GACNNNGTC | 1 cut(s) | 643 |
| RsaI | GTAC | 5 cut(s) | 377, 488, 767, 950, 1028 |
| RsaNI | GTAC | 5 cut(s) | 376, 487, 766, 949, 1027 |
| RseI | CAYNNNNRTG | 1 cut(s) | 782 |
| Rsr2I | CGGWCCG | 1 cut(s) | 101 |
| RsrII | CGGWCCG | 1 cut(s) | 101 |
| SacI | GAGCTC | 1 cut(s) | 18 |
| SapI | GCTCTTC | 1 cut(s) | 23 |
| SaqAI | TTAA | 1 cut(s) | 695 |
| SatI | GCNGC | 7 cut(s) | 6, 91, 322, 591, 835, 859, 902 |
| Sau3AI | GATC | 4 cut(s) | 42, 259, 289, 724 |
| Sau96I | GGNCC | 3 cut(s) | 101, 877, 922 |
| SchI | GAGTC | 1 cut(s) | 982 |
| ScrFI | CCNGG | 4 cut(s) | 422, 427, 795, 796 |
| SduI | GDGCHC | 3 cut(s) | 18, 1124, 1151 |
| SfaNI | GCATC | 3 cut(s) | 366, 607, 816 |
| SinI | GGWCC | 2 cut(s) | 101, 877 |
| SmaI | CCCGGG | 1 cut(s) | 796 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 782 |
| SmlI | CTYRAG | 1 cut(s) | 85 |
| SmoI | CTYRAG | 1 cut(s) | 85 |
| Sse9I | AATT | 2 cut(s) | 493, 599 |
| SsiI | CCGC | 7 cut(s) | 112, 355, 447, 475, 834, 859, 906 |
| SspI | AATATT | 1 cut(s) | 433 |
| SspMI | CTAG | 5 cut(s) | 222, 314, 818, 965, 1083 |
| SstI | GAGCTC | 1 cut(s) | 18 |
| StyD4I | CCNGG | 4 cut(s) | 420, 425, 793, 794 |
| StyI | CCWWGG | 2 cut(s) | 811, 1035 |
| TaaI | ACNGT | 4 cut(s) | 109, 463, 522, 932 |
| TaiI | ACGT | 3 cut(s) | 383, 410, 1121 |
| TaqI | TCGA | 4 cut(s) | 12, 327, 566, 942 |
| TaqII | GACCGA | 1 cut(s) | 118 |
| TasI | AATT | 2 cut(s) | 493, 599 |
| TatI | WGTACW | 1 cut(s) | 375 |
| TauI | GCSGC | 2 cut(s) | 837, 861 |
| TfiI | GAWTC | 2 cut(s) | 454, 944 |
| Tru1I | TTAA | 1 cut(s) | 695 |
| Tru9I | TTAA | 1 cut(s) | 695 |
| TscAI | CASTG | 2 cut(s) | 299, 682 |
| TseFI | GTSAC | 3 cut(s) | 516, 528, 1137 |
| TseI | GCWGC | 5 cut(s) | 5, 90, 321, 590, 901 |
| Tsp45I | GTSAC | 3 cut(s) | 516, 528, 1137 |
| TspDTI | ATGAA | 4 cut(s) | 43, 612, 1124, 1173 |
| TspGWI | ACGGA | 2 cut(s) | 114, 504 |
| TspMI | CCCGGG | 1 cut(s) | 794 |
| TspRI | CASTG | 2 cut(s) | 299, 682 |
| Tth111I | GACNNNGTC | 1 cut(s) | 643 |
| VpaK11BI | GGWCC | 2 cut(s) | 101, 877 |
| XmaI | CCCGGG | 1 cut(s) | 794 |
| XmiI | GTMKAC | 2 cut(s) | 506, 1092 |
| XspI | CTAG | 5 cut(s) | 222, 314, 818, 965, 1083 |
| ZraI | GACGTC | 1 cut(s) | 408 |
| Zsp2I | ATGCAT | 1 cut(s) | 809 |