Prupe.5G168300_v2.0.a1

Tryptophan aminotransferase-related protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
14496299 .. 14500926
4628 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G168300.4

Sequence Viewer

Length: 1314 bp
ATGGCCAATTTTATGAGCATTTGCACAATGAGAAACTTGCTTGTTCTGTCTCTGGCTCTTAATCTGAGCTTGATTATGAGGGTTTTTTATGAGGGCGAGAAGCATGGCCCTCGTGGGTTCTCTGCGCAGAAGGCTGACAGGGCGCTTGAGAAGGCAGCTCACGCAACCCAGAGGACCCTTGTGTCATTGTCTTCTTCTGGTCAAGATGACGGGGAGAAACTCATCAACCTCGACCATGGAGACCCAACTATGTATGAAAGTTACTGGCAGCAGATGGGTGAAAAGACCACAGTTGTGATCCCTGGATGGCAGTCAATGAGCTATTTCTCAGATGTGAAAAACCCTTGCTGGTTTTTGGAGCCAGAGTTTGCCAAGCAGGTTGTGAGGCTGCACAATCTGGTGGGCAATGCTGTCACAGAAGGTCGTCAAATTGTGGTTGGCACAGGCTCATCACAGCTCTTCTTAGCTGCCCTCTATGCTCTGGCTCCAAAAGATGCATCTGAGCCTATAAGTGTGATTTCTGCAGCCCCATTCTACTCTTCTTACCCCTCTATGACTGACTACCTCAAGTCGGGCTTGTACAAATGGGCAGGGGATGCCCGGAGCTTCGACAAAGAGGGGCCGTACATAGAGCTAGTGACCTCCCCCAACAACCCTGATGGATTTGTCAGGCACTCCATGGTCAACCGAACTGGAGGTATATTGGTTCATGACTTGGCCTACTACTGGCCACAATATACCCCCATTTCGTCGGCAGCTGACCATGATCTGACTCTGTTCACCGTCTCGAAAGCCACCGGGCATGCCGGGACACGCATTGGCTGGGCTCTTGTCAAAGATCCAGAAGTTGCCAAAAAGATGATCAAGTTCATAGAGCTCAGCACCATAGGCGTGTCCCGGGATTCGCAGCTCCGAGCAGCTAGGATTTTGGAGGTGATCATCAACTCCTCCCAAAACCCTGGCGGGCCGGAGTCCGGTGAATCTTTCTTTAAGATCAGCTATCACTTCATGGCAGAGAGGTGGCAGCTTCTTAGAGAGGCGGTGAACAAGGGCAGATTTTTTAGTCTGCCTGACTTCCAGCAAGGGTTCTGCCAGTTCCTCAACCAGGTCTCGCAGCCTCAACCTGCTTTCGCATGGCTCAAATGTGAAGACGAAGGCGTGGAAGATTGCGAAAGCTTACTCAGAGGTCATAAGATTTTAACCCGAGGAGGAAGGAGCTTTGGAGTTGGTCCAAAGTATGTCCGCGTGAGCATGTTGGATCGGGACCATAACTTCAACTTGTTTTTGAAGCGACTGGCCTCGATCCAGACATGA

Protein Analysis

438

Amino Acids

48.82

Weight (kDa)

7.68

Isoelectric Point (pI)

38.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 181
Acc16I TGCGCA 1 cut(s) 126
Acc36I ACCTGC 2 cut(s) 367, 1132
AccII CGCG 1 cut(s) 1245
AciI CCGC 3 cut(s) 963, 1040, 1243
AclWI GGATC 4 cut(s) 292, 833, 1266, 1297
AcoI YGGCCR 2 cut(s) 3, 728
AfaI GTAC 2 cut(s) 581, 626
AfiI CCNNNNNNNGG 4 cut(s) 571, 726, 974, 1105
AgsI TTSAA 2 cut(s) 1276, 1288
AjnI CCWGG 3 cut(s) 301, 958, 1104
AleI CACNNNNGTG 1 cut(s) 293
Alw21I GWGCWC 1 cut(s) 879
Alw26I GTCTC 4 cut(s) 54, 234, 790, 1114
AlwI GGATC 4 cut(s) 292, 833, 1266, 1297
Ama87I CYCGRG 2 cut(s) 897, 1203
AoxI GGCC 7 cut(s) 3, 106, 620, 717, 728, 965, 1296
AspLEI GCGC 2 cut(s) 127, 145
AspS9I GGNCC 6 cut(s) 107, 174, 620, 965, 1229, 1264
AsuC2I CCSGG 5 cut(s) 601, 799, 808, 898, 899
AsuHPI GGTGA 5 cut(s) 290, 772, 946, 989, 1054
AvaI CYCGRG 2 cut(s) 897, 1203
AvaII GGWCC 3 cut(s) 174, 1229, 1264
BalI TGGCCA 2 cut(s) 5, 730
BanII GRGCYC 2 cut(s) 829, 879
BauI CACGAG 1 cut(s) 111
BbsI GAAGAC 2 cut(s) 183, 1155
Bbv12I GWGCWC 1 cut(s) 879
BccI CCATC 3 cut(s) 268, 300, 653
BceAI ACGGC 1 cut(s) 607
BcgI CGANNNNNNTGC 2 cut(s) 92, 126
BciT130I CCWGG 3 cut(s) 303, 960, 1106
BclI TGATCA 2 cut(s) 861, 936
BcnI CCSGG 5 cut(s) 601, 799, 808, 898, 899
BcoDI GTCTC 4 cut(s) 54, 234, 790, 1114
BfaI CTAG 2 cut(s) 635, 921
BfmI CTRYAG 1 cut(s) 522
BfoI RGCGCY 1 cut(s) 146
BfuAI ACCTGC 2 cut(s) 367, 1132
BlpI GCTNAGC 1 cut(s) 878
Bme1390I CCNGG 8 cut(s) 303, 601, 799, 808, 898, 899, 960, 1106
Bme18I GGWCC 3 cut(s) 174, 1229, 1264
BmeT110I CYCGRG 2 cut(s) 897, 1203
BmgT120I GGNCC 6 cut(s) 107, 174, 620, 965, 1229, 1264
BmiI GGNNCC 5 cut(s) 176, 360, 486, 621, 1265
BmrFI CCNGG 8 cut(s) 303, 601, 799, 808, 898, 899, 960, 1106
BmsI GCATC 3 cut(s) 484, 506, 586
BpiI GAAGAC 2 cut(s) 183, 1155
BpmI CTGGAG 1 cut(s) 714
Bpu1102I GCTNAGC 1 cut(s) 878
BpuEI CTTGAG 2 cut(s) 167, 551
BpuMI CCSGG 5 cut(s) 601, 799, 808, 898, 899
BsaI GGTCTC 2 cut(s) 234, 1114
BsaJI CCNNGG 6 cut(s) 235, 301, 678, 897, 958, 1204
BsaWI WCCGGW 1 cut(s) 974
BsaXI ACNNNNNCTCC 2 cut(s) 350, 380
Bsc4I CCNNNNNNNGG 4 cut(s) 571, 726, 974, 1105
Bse1I ACTGG 5 cut(s) 269, 697, 731, 1093, 1299
Bse3DI GCAATG 1 cut(s) 412
BseBI CCWGG 3 cut(s) 303, 960, 1106
BseDI CCNNGG 6 cut(s) 235, 301, 678, 897, 958, 1204
BseGI GGATG 2 cut(s) 311, 601
BseLI CCNNNNNNNGG 4 cut(s) 571, 726, 974, 1105
BseMI GCAATG 1 cut(s) 412
BseMII CTCAG 5 cut(s) 56, 342, 492, 892, 1195
BseNI ACTGG 5 cut(s) 269, 697, 731, 1093, 1299
BseRI GAGGAG 2 cut(s) 937, 1221
BseYI CCCAGC 1 cut(s) 822
BsgI GTGCAG 1 cut(s) 374
Bsh1236I CGCG 1 cut(s) 1245
BshFI GGCC 7 cut(s) 5, 108, 622, 719, 730, 967, 1298
BsiHKAI GWGCWC 1 cut(s) 879
BsiHKCI CYCGRG 2 cut(s) 897, 1203
BsiSI CCGG 6 cut(s) 601, 798, 807, 898, 968, 975
BslFI GGGAC 3 cut(s) 823, 880, 1277
BslI CCNNNNNNNGG 4 cut(s) 571, 726, 974, 1105
BsmAI GTCTC 4 cut(s) 54, 234, 790, 1114
BsmBI CGTCTC 1 cut(s) 790
BsmFI GGGAC 3 cut(s) 823, 880, 1277
BsnI GGCC 7 cut(s) 5, 108, 622, 719, 730, 967, 1298
Bso31I GGTCTC 2 cut(s) 234, 1114
BsoBI CYCGRG 2 cut(s) 897, 1203
Bsp1286I GDGCHC 2 cut(s) 829, 879
Bsp1407I TGTACA 1 cut(s) 579
Bsp143I GATC 8 cut(s) 297, 766, 838, 861, 936, 993, 1258, 1302
Bsp1720I GCTNAGC 1 cut(s) 878
Bsp19I CCATGG 2 cut(s) 235, 678
BspACI CCGC 3 cut(s) 963, 1040, 1243
BspANI GGCC 7 cut(s) 5, 108, 622, 719, 730, 967, 1298
BspCNI CTCAG 5 cut(s) 57, 341, 493, 891, 1194
BspFNI CGCG 1 cut(s) 1245
BspHI TCATGA 1 cut(s) 709
BspLI GGNNCC 5 cut(s) 176, 360, 486, 621, 1265
BspMAI CTGCAG 1 cut(s) 526
BspMI ACCTGC 2 cut(s) 367, 1132
BspPI GGATC 4 cut(s) 292, 833, 1266, 1297
BspQI GCTCTTC 1 cut(s) 464
BspTNI GGTCTC 2 cut(s) 234, 1114
BsrDI GCAATG 1 cut(s) 412
BsrGI TGTACA 1 cut(s) 579
BsrI ACTGG 5 cut(s) 269, 697, 731, 1093, 1299
BssECI CCNNGG 6 cut(s) 235, 301, 678, 897, 958, 1204
BssMI GATC 8 cut(s) 297, 766, 838, 861, 936, 993, 1258, 1302
BssSI CACGAG 1 cut(s) 111
BssT1I CCWWGG 2 cut(s) 235, 678
Bst2BI CACGAG 1 cut(s) 111
Bst2UI CCWGG 3 cut(s) 303, 960, 1106
Bst4CI ACNGT 2 cut(s) 292, 784
Bst6I CTCTTC 2 cut(s) 464, 544
BstAPI GCANNNNNTGC 1 cut(s) 596
BstAUI TGTACA 1 cut(s) 579
BstC8I GCNNGC 2 cut(s) 804, 965
BstDEI CTNAG 7 cut(s) 65, 328, 463, 501, 878, 1031, 1181
BstDSI CCRYGG 2 cut(s) 235, 678
BstENI CCTNNNNNAGG 1 cut(s) 1103
BstF5I GGATG 2 cut(s) 311, 601
BstFNI CGCG 1 cut(s) 1245
BstH2I RGCGCY 1 cut(s) 146
BstHHI GCGC 2 cut(s) 127, 145
BstKTI GATC 8 cut(s) 300, 769, 841, 864, 939, 996, 1261, 1305
BstMAI GTCTC 4 cut(s) 54, 234, 790, 1114
BstMBI GATC 8 cut(s) 297, 766, 838, 861, 936, 993, 1258, 1302
BstMWI GCNNNNNNNGC 6 cut(s) 131, 140, 161, 476, 596, 888
BstNI CCWGG 3 cut(s) 303, 960, 1106
BstNSI RCATGY 2 cut(s) 806, 1255
BstSCI CCNGG 8 cut(s) 301, 599, 797, 806, 896, 897, 958, 1104
BstSFI CTRYAG 1 cut(s) 522
BstUI CGCG 1 cut(s) 1245
BstV2I GAAGAC 2 cut(s) 183, 1155
BstX2I RGATCY 1 cut(s) 838
BstXI CCANNNNNNTGG 1 cut(s) 959
BstYI RGATCY 1 cut(s) 838
BsuRI GGCC 7 cut(s) 5, 108, 622, 719, 730, 967, 1298
BtgI CCRYGG 2 cut(s) 235, 678
BtsCI GGATG 2 cut(s) 311, 601
BveI ACCTGC 2 cut(s) 367, 1132
Cac8I GCNNGC 2 cut(s) 804, 965
CciI TCATGA 1 cut(s) 709
CfoI GCGC 2 cut(s) 127, 145
Cfr13I GGNCC 6 cut(s) 107, 174, 620, 965, 1229, 1264
Cfr9I CCCGGG 1 cut(s) 897
CsiI ACCWGGT 1 cut(s) 1104
Csp6I GTAC 2 cut(s) 580, 625
CviQI GTAC 2 cut(s) 580, 625
DdeI CTNAG 7 cut(s) 65, 328, 463, 501, 878, 1031, 1181
DpnI GATC 8 cut(s) 299, 768, 840, 863, 938, 995, 1260, 1304
DpnII GATC 8 cut(s) 297, 766, 838, 861, 936, 993, 1258, 1302
DrdI GACNNNNNNGTC 1 cut(s) 181
DseDI GACNNNNNNGTC 1 cut(s) 181
EaeI YGGCCR 2 cut(s) 3, 728
Eam1104I CTCTTC 2 cut(s) 464, 544
EarI CTCTTC 2 cut(s) 464, 544
Ecl136II GAGCTC 1 cut(s) 877
Eco130I CCWWGG 2 cut(s) 235, 678
Eco24I GRGCYC 2 cut(s) 829, 879
Eco31I GGTCTC 2 cut(s) 234, 1114
Eco47I GGWCC 3 cut(s) 174, 1229, 1264
Eco53kI GAGCTC 1 cut(s) 877
Eco88I CYCGRG 2 cut(s) 897, 1203
EcoICRI GAGCTC 1 cut(s) 877
EcoNI CCTNNNNNAGG 1 cut(s) 1103
EcoO109I RGGNCCY 1 cut(s) 174
EcoRII CCWGG 3 cut(s) 301, 958, 1104
EcoT14I CCWWGG 2 cut(s) 235, 678
EcoT22I ATGCAT 1 cut(s) 499
EcoT38I GRGCYC 2 cut(s) 829, 879
ErhI CCWWGG 2 cut(s) 235, 678
Esp3I CGTCTC 1 cut(s) 790
FalI AAGNNNNNCTT 2 cut(s) 560, 592
FaqI GGGAC 3 cut(s) 823, 880, 1277
FauI CCCGC 1 cut(s) 956
FbaI TGATCA 2 cut(s) 861, 936
FokI GGATG 2 cut(s) 318, 608
FriOI GRGCYC 2 cut(s) 829, 879
FspBI CTAG 2 cut(s) 635, 921
FspI TGCGCA 1 cut(s) 126
GlaI GCGC 2 cut(s) 126, 144
GsaI CCCAGC 1 cut(s) 826
GsuI CTGGAG 1 cut(s) 714
HaeII RGCGCY 1 cut(s) 146
HaeIII GGCC 7 cut(s) 5, 108, 622, 719, 730, 967, 1298
HapII CCGG 6 cut(s) 601, 798, 807, 898, 968, 975
HhaI GCGC 2 cut(s) 127, 145
Hin6I GCGC 2 cut(s) 125, 143
HinP1I GCGC 2 cut(s) 125, 143
HincII GTYRAC 1 cut(s) 685
HindII GTYRAC 1 cut(s) 685
HindIII AAGCTT 1 cut(s) 1174
HinfI GANTC 4 cut(s) 772, 902, 971, 980
HpaII CCGG 6 cut(s) 601, 798, 807, 898, 968, 975
HphI GGTGA 5 cut(s) 290, 772, 946, 989, 1054
Hpy166II GTNNAC 3 cut(s) 685, 780, 1045
Hpy188I TCNGA 6 cut(s) 66, 331, 502, 771, 914, 1184
Hpy188III TCNNGA 6 cut(s) 203, 710, 787, 842, 1262, 1306
Hpy8I GTNNAC 3 cut(s) 685, 780, 1045
Hpy99I CGWCG 1 cut(s) 754
HpyAV CCTTC 5 cut(s) 124, 145, 413, 1148, 1206
HpyCH4III ACNGT 2 cut(s) 292, 784
HpyCH4V TGCA 4 cut(s) 24, 391, 497, 524
HpyF10VI GCNNNNNNNGC 6 cut(s) 131, 140, 161, 476, 596, 888
HpyF3I CTNAG 7 cut(s) 65, 328, 463, 501, 878, 1031, 1181
HspAI GCGC 2 cut(s) 125, 143
Ksp22I TGATCA 2 cut(s) 861, 936
Kzo9I GATC 8 cut(s) 297, 766, 838, 861, 936, 993, 1258, 1302
LguI GCTCTTC 1 cut(s) 464
LmnI GCTCC 5 cut(s) 358, 490, 603, 915, 1215
LweI GCATC 3 cut(s) 484, 506, 586
MabI ACCWGGT 1 cut(s) 1104
MaeI CTAG 2 cut(s) 635, 921
MaeIII GTNAC 3 cut(s) 260, 412, 637
MalI GATC 8 cut(s) 299, 768, 840, 863, 938, 995, 1260, 1304
MboI GATC 8 cut(s) 297, 766, 838, 861, 936, 993, 1258, 1302
MboII GAAGA 6 cut(s) 183, 186, 451, 531, 1160, 1175
MflI RGATCY 1 cut(s) 838
MhlI GDGCHC 2 cut(s) 829, 879
MlsI TGGCCA 2 cut(s) 5, 730
MluCI AATT 2 cut(s) 7, 429
MluNI TGGCCA 2 cut(s) 5, 730
MlyI GAGTC 2 cut(s) 766, 980
MmeI TCCRAC 1 cut(s) 1236
Mox20I TGGCCA 2 cut(s) 5, 730
Mph1103I ATGCAT 1 cut(s) 499
MscI TGGCCA 2 cut(s) 5, 730
MseI TTAA 3 cut(s) 60, 990, 1199
MslI CAYNNNNRTG 2 cut(s) 293, 890
Msp20I TGGCCA 2 cut(s) 5, 730
MspA1I CMGCKG 1 cut(s) 758
MspI CCGG 6 cut(s) 601, 798, 807, 898, 968, 975
MspR9I CCNGG 8 cut(s) 303, 601, 799, 808, 898, 899, 960, 1106
MvaI CCWGG 3 cut(s) 303, 960, 1106
MvnI CGCG 1 cut(s) 1245
MwoI GCNNNNNNNGC 6 cut(s) 131, 140, 161, 476, 596, 888
NciI CCSGG 5 cut(s) 601, 799, 808, 898, 899
NcoI CCATGG 2 cut(s) 235, 678
NdeII GATC 8 cut(s) 297, 766, 838, 861, 936, 993, 1258, 1302
NlaIV GGNNCC 5 cut(s) 176, 360, 486, 621, 1265
NmuCI GTSAC 2 cut(s) 412, 637
NsbI TGCGCA 1 cut(s) 126
NsiI ATGCAT 1 cut(s) 499
NspI RCATGY 2 cut(s) 806, 1255
OliI CACNNNNGTG 1 cut(s) 293
PaeI GCATGC 1 cut(s) 806
PagI TCATGA 1 cut(s) 709
PciSI GCTCTTC 1 cut(s) 464
PfeI GAWTC 2 cut(s) 902, 980
PleI GAGTC 2 cut(s) 766, 979
PpsI GAGTC 2 cut(s) 766, 979
PpuMI RGGWCCY 1 cut(s) 174
Psp124BI GAGCTC 1 cut(s) 879
Psp5II RGGWCCY 1 cut(s) 174
Psp6I CCWGG 3 cut(s) 301, 958, 1104
PspFI CCCAGC 1 cut(s) 822
PspGI CCWGG 3 cut(s) 301, 958, 1104
PspN4I GGNNCC 5 cut(s) 176, 360, 486, 621, 1265
PspPI GGNCC 6 cut(s) 107, 174, 620, 965, 1229, 1264
PspPPI RGGWCCY 1 cut(s) 174
PstI CTGCAG 1 cut(s) 526
PsuI RGATCY 1 cut(s) 838
PvuII CAGCTG 1 cut(s) 758
RsaI GTAC 2 cut(s) 581, 626
RsaNI GTAC 2 cut(s) 580, 625
RseI CAYNNNNRTG 2 cut(s) 293, 890
SacI GAGCTC 1 cut(s) 879
SapI GCTCTTC 1 cut(s) 464
SaqAI TTAA 3 cut(s) 60, 990, 1199
Sau3AI GATC 8 cut(s) 297, 766, 838, 861, 936, 993, 1258, 1302
Sau96I GGNCC 6 cut(s) 107, 174, 620, 965, 1229, 1264
SchI GAGTC 2 cut(s) 766, 980
ScrFI CCNGG 8 cut(s) 303, 601, 799, 808, 898, 899, 960, 1106
SduI GDGCHC 2 cut(s) 829, 879
SexAI ACCWGGT 1 cut(s) 1104
SfaNI GCATC 3 cut(s) 484, 506, 586
SfcI CTRYAG 1 cut(s) 522
SinI GGWCC 3 cut(s) 174, 1229, 1264
SmaI CCCGGG 1 cut(s) 899
SmiMI CAYNNNNRTG 2 cut(s) 293, 890
SmlI CTYRAG 2 cut(s) 146, 566
SmoI CTYRAG 2 cut(s) 146, 566
SphI GCATGC 1 cut(s) 806
Sse9I AATT 2 cut(s) 7, 429
SsiI CCGC 3 cut(s) 963, 1040, 1243
SspMI CTAG 2 cut(s) 635, 921
SstI GAGCTC 1 cut(s) 879
StyD4I CCNGG 8 cut(s) 301, 599, 797, 806, 896, 897, 958, 1104
StyI CCWWGG 2 cut(s) 235, 678
TaaI ACNGT 2 cut(s) 292, 784
TaqI TCGA 4 cut(s) 231, 609, 788, 1301
TasI AATT 2 cut(s) 7, 429
TatI WGTACW 1 cut(s) 579
TfiI GAWTC 2 cut(s) 902, 980
Tru1I TTAA 3 cut(s) 60, 990, 1199
Tru9I TTAA 3 cut(s) 60, 990, 1199
TseFI GTSAC 2 cut(s) 412, 637
Tsp45I GTSAC 2 cut(s) 412, 637
TspDTI ATGAA 4 cut(s) 270, 698, 859, 997
TspMI CCCGGG 1 cut(s) 897
VpaK11BI GGWCC 3 cut(s) 174, 1229, 1264
XagI CCTNNNNNAGG 1 cut(s) 1103
XceI RCATGY 2 cut(s) 806, 1255
XmaI CCCGGG 1 cut(s) 897
XspI CTAG 2 cut(s) 635, 921
Zsp2I ATGCAT 1 cut(s) 499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.