pycom06g15090

Tryptophan aminotransferase-related protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
19689428 .. 19700577
11150 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g15090.3

Sequence Viewer

Length: 978 bp
ATGGCCAACTTTCTGGGGATTTTCACAGTGAGGAACTTGCTTGGGCTGTCACTGGCTCTTAATCTGAGCTTGGTTCTGAGGGTGGTTTACGAGAGCGGGAAGGATGGGGGCCCACATGGGTTCTCTGTGGAGGAGCAGAGAGTTCCGTCAATGGCGGACATGGGTTTTGGGAAGGAAGCTCAGGCGACGCAGAGGACGCGTCTCTCCGCTTCTTCTTCTTCTGGCCAAGATGTCATGGAGAAAGTTATCAACCTCGACCACGGTGACCCTACTATGTATGAAAATTACTGGCAGCGGATGGGTGAAAGAACCACAGTCGTGATCTCTGGGTGGCAGTCAATGAGCTATTTCTCAGATGTCAAAAACCCTTGCTGGTTTTTGGAGCCAGAGTTTGCCAAACAAGTTGTGAGACTGCACAATGTGGTCGGCAACGCCGTCACCGAGGGCCGCCAAATCGTCGTCGGGACGGGTTCATCCCAGCTGTTTTTAGCCGCCCTCTATGCCCTAGCTCCCAAAGATGGATCTGAGCCATTGAGTGTGGTGTCGGCCGCCCCATACTACTCGTCTTACCCCTCTATGACGGACTGCTTGAAGTCCGGCTTGTACAAGTGGGCCGGTGATGCCCGAATCTTCAGCAAAGAGGGACCTTATATAGAGCTAGTGACCTCCCCAAACAACCCTGATGGATTCGTCAGGCATTCCATGGTCAATCGAACGGGGGGTTTATTGGTTCACGACTTGGCCTACTACTGGCCACAGTATACCCCGATTTCTTCTCCTGCGGACCATGATCTGACGCTGTTCACCGTCTCCAAAGCTACTGGCCATGCTGGGACACGCATTGGGTGGGCTCTTGTTAAAGATCCTGAAGTTGCAAAGAAGATCGATCAAATTCATAGAGCTCAACACCATTGGTGTGTCCAGGGATTCACAGCTCCGAGCTGCCAAGATTTTAGAGGTGATGACCAACTCCTCTGA

Protein Analysis

326

Amino Acids

35.86

Weight (kDa)

6.2

Isoelectric Point (pI)

32.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 96
AccI GTMKAC 1 cut(s) 761
AccII CGCG 1 cut(s) 199
AciI CCGC 8 cut(s) 96, 155, 207, 295, 448, 492, 549, 782
AclWI GGATC 2 cut(s) 529, 857
AcoI YGGCCR 5 cut(s) 3, 223, 546, 752, 823
AcsI RAATTY 1 cut(s) 891
AcuI CTGAAG 2 cut(s) 616, 888
AdeI CACNNNGTG 1 cut(s) 421
AfaI GTAC 1 cut(s) 605
AfiI CCNNNNNNNGG 2 cut(s) 518, 750
AflIII ACRYGT 1 cut(s) 197
AgsI TTSAA 1 cut(s) 592
AjnI CCWGG 1 cut(s) 921
AleI CACNNNNGTG 1 cut(s) 317
Alw21I GWGCWC 1 cut(s) 904
Alw26I GTCTC 3 cut(s) 206, 403, 814
AlwI GGATC 2 cut(s) 529, 857
AoxI GGCC 9 cut(s) 3, 109, 223, 445, 546, 612, 741, 752, 823
ApaI GGGCCC 1 cut(s) 113
ApeKI GCWGC 2 cut(s) 292, 942
ApoI RAATTY 1 cut(s) 891
ArsI GACNNNNNNTTYG 2 cut(s) 149, 181
AspS9I GGNCC 6 cut(s) 109, 110, 445, 612, 644, 784
AsuHPI GGTGA 6 cut(s) 275, 314, 430, 629, 796, 971
AvaII GGWCC 2 cut(s) 644, 784
BaeGI GKGCMC 1 cut(s) 113
BalI TGGCCA 4 cut(s) 5, 225, 754, 825
BanII GRGCYC 3 cut(s) 113, 853, 904
Bbv12I GWGCWC 1 cut(s) 904
BbvI GCAGC 2 cut(s) 304, 929
BccI CCATC 4 cut(s) 98, 292, 512, 677
BceAI ACGGC 1 cut(s) 419
BciT130I CCWGG 1 cut(s) 923
BcoDI GTCTC 3 cut(s) 206, 403, 814
BfaI CTAG 2 cut(s) 506, 659
BisI GCNGC 5 cut(s) 293, 448, 492, 549, 943
BlsI GCNGC 5 cut(s) 294, 449, 493, 550, 944
Bme1390I CCNGG 1 cut(s) 923
Bme18I GGWCC 2 cut(s) 644, 784
BmgT120I GGNCC 6 cut(s) 109, 110, 445, 612, 644, 784
BmiI GGNNCC 4 cut(s) 110, 111, 384, 645
BmrFI CCNGG 1 cut(s) 923
BmsI GCATC 1 cut(s) 610
Bpu10I CCTNAGC 1 cut(s) 180
Bsa29I ATCGAT 1 cut(s) 885
BsaJI CCNNGG 4 cut(s) 259, 441, 702, 922
BsaXI ACNNNNNCTCC 2 cut(s) 374, 404
Bsc4I CCNNNNNNNGG 2 cut(s) 518, 750
Bse118I RCCGGY 1 cut(s) 614
Bse1I ACTGG 4 cut(s) 57, 293, 755, 826
BseBI CCWGG 1 cut(s) 923
BseCI ATCGAT 1 cut(s) 885
BseDI CCNNGG 4 cut(s) 259, 441, 702, 922
BseGI GGATG 3 cut(s) 109, 303, 473
BseLI CCNNNNNNNGG 2 cut(s) 518, 750
BseMII CTCAG 5 cut(s) 56, 68, 194, 366, 516
BseNI ACTGG 4 cut(s) 57, 293, 755, 826
BseRI GAGGAG 2 cut(s) 146, 962
BseSI GKGCMC 1 cut(s) 113
BseX3I CGGCCG 1 cut(s) 546
BseXI GCAGC 2 cut(s) 304, 929
BseYI CCCAGC 2 cut(s) 477, 830
BsgI GTGCAG 1 cut(s) 398
Bsh1236I CGCG 1 cut(s) 199
Bsh1285I CGRYCG 1 cut(s) 549
BshFI GGCC 9 cut(s) 5, 111, 225, 447, 548, 614, 743, 754, 825
BshVI ATCGAT 1 cut(s) 885
BsiEI CGRYCG 1 cut(s) 549
BsiHKAI GWGCWC 1 cut(s) 904
BsiSI CCGG 2 cut(s) 597, 615
BslFI GGGAC 3 cut(s) 478, 657, 847
BslI CCNNNNNNNGG 2 cut(s) 518, 750
BsmAI GTCTC 3 cut(s) 206, 403, 814
BsmBI CGTCTC 2 cut(s) 206, 814
BsmFI GGGAC 3 cut(s) 478, 657, 847
BsmI GAATGC 1 cut(s) 697
BsnI GGCC 9 cut(s) 5, 111, 225, 447, 548, 614, 743, 754, 825
Bsp120I GGGCCC 1 cut(s) 109
Bsp1286I GDGCHC 3 cut(s) 113, 853, 904
Bsp1407I TGTACA 1 cut(s) 603
Bsp143I GATC 6 cut(s) 321, 521, 790, 862, 882, 886
Bsp19I CCATGG 1 cut(s) 702
BspACI CCGC 8 cut(s) 96, 155, 207, 295, 448, 492, 549, 782
BspANI GGCC 9 cut(s) 5, 111, 225, 447, 548, 614, 743, 754, 825
BspCNI CTCAG 5 cut(s) 57, 69, 193, 365, 517
BspDI ATCGAT 1 cut(s) 885
BspFNI CGCG 1 cut(s) 199
BspLI GGNNCC 4 cut(s) 110, 111, 384, 645
BspPI GGATC 2 cut(s) 529, 857
BsrBI CCGCTC 1 cut(s) 96
BsrFI RCCGGY 1 cut(s) 614
BsrGI TGTACA 1 cut(s) 603
BsrI ACTGG 4 cut(s) 57, 293, 755, 826
BssAI RCCGGY 1 cut(s) 614
BssECI CCNNGG 4 cut(s) 259, 441, 702, 922
BssMI GATC 6 cut(s) 321, 521, 790, 862, 882, 886
BssNAI GTATAC 1 cut(s) 762
BssT1I CCWWGG 1 cut(s) 702
Bst1107I GTATAC 1 cut(s) 762
Bst2UI CCWGG 1 cut(s) 923
Bst4CI ACNGT 5 cut(s) 28, 263, 316, 759, 808
BstAUI TGTACA 1 cut(s) 603
BstDEI CTNAG 5 cut(s) 65, 77, 180, 352, 525
BstDSI CCRYGG 2 cut(s) 259, 702
BstEII GGTNACC 1 cut(s) 263
BstF5I GGATG 3 cut(s) 109, 303, 473
BstFNI CGCG 1 cut(s) 199
BstKTI GATC 6 cut(s) 324, 524, 793, 865, 885, 889
BstMAI GTCTC 3 cut(s) 206, 403, 814
BstMBI GATC 6 cut(s) 321, 521, 790, 862, 882, 886
BstMCI CGRYCG 1 cut(s) 549
BstMWI GCNNNNNNNGC 3 cut(s) 196, 500, 620
BstNI CCWGG 1 cut(s) 923
BstPI GGTNACC 1 cut(s) 263
BstSCI CCNGG 1 cut(s) 921
BstSLI GKGCMC 1 cut(s) 113
BstUI CGCG 1 cut(s) 199
BstV1I GCAGC 2 cut(s) 304, 929
BstX2I RGATCY 2 cut(s) 521, 862
BstXI CCANNNNNNTGG 1 cut(s) 13
BstYI RGATCY 2 cut(s) 521, 862
BstZ17I GTATAC 1 cut(s) 762
BstZI CGGCCG 1 cut(s) 546
Bsu15I ATCGAT 1 cut(s) 885
BsuRI GGCC 9 cut(s) 5, 111, 225, 447, 548, 614, 743, 754, 825
BsuTUI ATCGAT 1 cut(s) 885
BtgI CCRYGG 2 cut(s) 259, 702
BtsCI GGATG 3 cut(s) 109, 303, 473
BtsIMutI CAGTG 2 cut(s) 33, 50
Cfr10I RCCGGY 1 cut(s) 614
Cfr13I GGNCC 6 cut(s) 109, 110, 445, 612, 644, 784
ClaI ATCGAT 1 cut(s) 885
CseI GACGC 4 cut(s) 188, 196, 205, 805
Csp6I GTAC 1 cut(s) 604
CviAII CATG 6 cut(s) 116, 160, 235, 703, 788, 827
CviQI GTAC 1 cut(s) 604
DdeI CTNAG 5 cut(s) 65, 77, 180, 352, 525
DpnI GATC 6 cut(s) 323, 523, 792, 864, 884, 888
DpnII GATC 6 cut(s) 321, 521, 790, 862, 882, 886
DraIII CACNNNGTG 1 cut(s) 421
EaeI YGGCCR 5 cut(s) 3, 223, 546, 752, 823
EagI CGGCCG 1 cut(s) 546
EciI GGCGGA 1 cut(s) 170
Ecl136II GAGCTC 1 cut(s) 902
EclXI CGGCCG 1 cut(s) 546
Eco130I CCWWGG 1 cut(s) 702
Eco24I GRGCYC 3 cut(s) 113, 853, 904
Eco47I GGWCC 2 cut(s) 644, 784
Eco52I CGGCCG 1 cut(s) 546
Eco53kI GAGCTC 1 cut(s) 902
Eco57I CTGAAG 2 cut(s) 616, 888
Eco91I GGTNACC 1 cut(s) 263
EcoICRI GAGCTC 1 cut(s) 902
EcoO109I RGGNCCY 2 cut(s) 109, 644
EcoO65I GGTNACC 1 cut(s) 263
EcoRII CCWGG 1 cut(s) 921
EcoT14I CCWWGG 1 cut(s) 702
EcoT38I GRGCYC 3 cut(s) 113, 853, 904
ErhI CCWWGG 1 cut(s) 702
Esp3I CGTCTC 2 cut(s) 206, 814
FaeI CATG 6 cut(s) 119, 163, 238, 706, 791, 830
FalI AAGNNNNNCTT 2 cut(s) 584, 616
FaqI GGGAC 3 cut(s) 478, 657, 847
FatI CATG 6 cut(s) 115, 159, 234, 702, 787, 826
FauI CCCGC 1 cut(s) 89
FblI GTMKAC 1 cut(s) 761
Fnu4HI GCNGC 5 cut(s) 293, 448, 492, 549, 943
FokI GGATG 3 cut(s) 116, 310, 460
FriOI GRGCYC 3 cut(s) 113, 853, 904
Fsp4HI GCNGC 5 cut(s) 293, 448, 492, 549, 943
FspBI CTAG 2 cut(s) 506, 659
GluI GCNGC 5 cut(s) 293, 448, 492, 549, 943
GsaI CCCAGC 2 cut(s) 481, 834
HaeIII GGCC 9 cut(s) 5, 111, 225, 447, 548, 614, 743, 754, 825
HapII CCGG 2 cut(s) 597, 615
HgaI GACGC 4 cut(s) 188, 196, 205, 805
Hin1II CATG 6 cut(s) 119, 163, 238, 706, 791, 830
HinfI GANTC 3 cut(s) 627, 687, 927
HpaII CCGG 2 cut(s) 597, 615
HphI GGTGA 6 cut(s) 275, 314, 430, 629, 796, 971
Hpy166II GTNNAC 4 cut(s) 88, 733, 762, 804
Hpy188I TCNGA 7 cut(s) 66, 78, 355, 526, 795, 939, 977
Hpy188III TCNNGA 4 cut(s) 319, 463, 734, 866
Hpy8I GTNNAC 4 cut(s) 88, 733, 762, 804
Hpy99I CGWCG 3 cut(s) 190, 461, 464
HpyAV CCTTC 2 cut(s) 94, 166
HpyCH4III ACNGT 5 cut(s) 28, 263, 316, 759, 808
HpyCH4V TGCA 2 cut(s) 415, 875
HpyF10VI GCNNNNNNNGC 3 cut(s) 196, 500, 620
HpyF3I CTNAG 5 cut(s) 65, 77, 180, 352, 525
Hsp92II CATG 6 cut(s) 119, 163, 238, 706, 791, 830
Kzo9I GATC 6 cut(s) 321, 521, 790, 862, 882, 886
LmnI GCTCC 4 cut(s) 133, 382, 514, 940
Lsp1109I GCAGC 2 cut(s) 304, 929
LweI GCATC 1 cut(s) 610
MaeI CTAG 2 cut(s) 506, 659
MaeIII GTNAC 4 cut(s) 48, 263, 436, 661
MalI GATC 6 cut(s) 323, 523, 792, 864, 884, 888
MbiI CCGCTC 1 cut(s) 96
MboI GATC 6 cut(s) 321, 521, 790, 862, 882, 886
MboII GAAGA 6 cut(s) 204, 207, 210, 622, 765, 892
MflI RGATCY 2 cut(s) 521, 862
MhlI GDGCHC 3 cut(s) 113, 853, 904
MlsI TGGCCA 4 cut(s) 5, 225, 754, 825
MluCI AATT 2 cut(s) 283, 891
MluI ACGCGT 1 cut(s) 197
MluNI TGGCCA 4 cut(s) 5, 225, 754, 825
Mox20I TGGCCA 4 cut(s) 5, 225, 754, 825
MscI TGGCCA 4 cut(s) 5, 225, 754, 825
MseI TTAA 2 cut(s) 60, 858
MslI CAYNNNNRTG 2 cut(s) 317, 915
Msp20I TGGCCA 4 cut(s) 5, 225, 754, 825
MspA1I CMGCKG 2 cut(s) 295, 481
MspI CCGG 2 cut(s) 597, 615
MspR9I CCNGG 1 cut(s) 923
Mva1269I GAATGC 1 cut(s) 697
MvaI CCWGG 1 cut(s) 923
MvnI CGCG 1 cut(s) 199
MwoI GCNNNNNNNGC 3 cut(s) 196, 500, 620
NcoI CCATGG 1 cut(s) 702
NdeII GATC 6 cut(s) 321, 521, 790, 862, 882, 886
NlaIII CATG 6 cut(s) 119, 163, 238, 706, 791, 830
NlaIV GGNNCC 4 cut(s) 110, 111, 384, 645
NmuCI GTSAC 4 cut(s) 48, 263, 436, 661
OliI CACNNNNGTG 1 cut(s) 317
PcsI WCGNNNNNNNCGW 2 cut(s) 432, 438
PctI GAATGC 1 cut(s) 697
PfeI GAWTC 3 cut(s) 627, 687, 927
PkrI GCNGC 5 cut(s) 294, 449, 493, 550, 944
PpuMI RGGWCCY 1 cut(s) 644
Psp124BI GAGCTC 1 cut(s) 904
Psp5II RGGWCCY 1 cut(s) 644
Psp6I CCWGG 1 cut(s) 921
PspEI GGTNACC 1 cut(s) 263
PspFI CCCAGC 2 cut(s) 477, 830
PspGI CCWGG 1 cut(s) 921
PspN4I GGNNCC 4 cut(s) 110, 111, 384, 645
PspOMI GGGCCC 1 cut(s) 109
PspPI GGNCC 6 cut(s) 109, 110, 445, 612, 644, 784
PspPPI RGGWCCY 1 cut(s) 644
PsuI RGATCY 2 cut(s) 521, 862
PvuII CAGCTG 1 cut(s) 481
RsaI GTAC 1 cut(s) 605
RsaNI GTAC 1 cut(s) 604
RseI CAYNNNNRTG 2 cut(s) 317, 915
SacI GAGCTC 1 cut(s) 904
SaqAI TTAA 2 cut(s) 60, 858
SatI GCNGC 5 cut(s) 293, 448, 492, 549, 943
Sau3AI GATC 6 cut(s) 321, 521, 790, 862, 882, 886
Sau96I GGNCC 6 cut(s) 109, 110, 445, 612, 644, 784
ScrFI CCNGG 1 cut(s) 923
SduI GDGCHC 3 cut(s) 113, 853, 904
SfaNI GCATC 1 cut(s) 610
SinI GGWCC 2 cut(s) 644, 784
SmiMI CAYNNNNRTG 2 cut(s) 317, 915
Sse9I AATT 2 cut(s) 283, 891
SsiI CCGC 8 cut(s) 96, 155, 207, 295, 448, 492, 549, 782
SspMI CTAG 2 cut(s) 506, 659
SstI GAGCTC 1 cut(s) 904
StyD4I CCNGG 1 cut(s) 921
StyI CCWWGG 1 cut(s) 702
TaaI ACNGT 5 cut(s) 28, 263, 316, 759, 808
TaqI TCGA 3 cut(s) 255, 712, 885
TasI AATT 2 cut(s) 283, 891
TatI WGTACW 1 cut(s) 603
TauI GCSGC 3 cut(s) 450, 494, 551
TfiI GAWTC 3 cut(s) 627, 687, 927
Tru1I TTAA 2 cut(s) 60, 858
Tru9I TTAA 2 cut(s) 60, 858
TscAI CASTG 2 cut(s) 33, 57
TseFI GTSAC 4 cut(s) 48, 263, 436, 661
TseI GCWGC 2 cut(s) 292, 942
Tsp45I GTSAC 4 cut(s) 48, 263, 436, 661
TspDTI ATGAA 3 cut(s) 294, 462, 884
TspGWI ACGGA 2 cut(s) 135, 596
TspRI CASTG 2 cut(s) 33, 57
VpaK11BI GGWCC 2 cut(s) 644, 784
XapI RAATTY 1 cut(s) 891
XmiI GTMKAC 1 cut(s) 761
XspI CTAG 2 cut(s) 506, 659
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.