Rh7AG131500

Tryptophan aminotransferase-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
10482620 .. 10490050
7431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG131500.1

Sequence Viewer

Length: 1314 bp
ATGGCCAAATTTCTGAGCATTTTCACAATGAGGAACTTGCTTGTGCTGTCTCTGGCGCTCAATCTAAGCTTGATTATGAGGGTTTTTTTCGATGGTGAGAAACAGGGCTTCTTCTCCGTGGAGCAGAAAGGTCCATCAATGGCCGAAGACAAGGAAGCTCACGCAACCCAGAGGACGCTTCAGTCAGTTTCTTCTTCGTCTGGCCAAGAAGGCATGGAAAAAGTCATTAACCTGGACCATGGTGACCCGACTATGTATGAAAAATATTGGATGATGATTGGTGAGAGAACCACAGTTGTAATTCCGGGGTGGCACTCCATGAGCTATTTCTCAGATGTTAAAAACCTCTGCTGGTTTTTGGAGCCCGAGTTTGCCAAGCAGGTTTTCAGATTACACAGAGTTGTGGGCAATGCCGTCACTGAAGGCCGTCACATTGTGGTTGGGACAGGTTCATCTCAGCTCATTTTAGCTGCGCTTTTCGCTCTTTCTCCGAAAGATGGATCTGAGCCCATGAGTGTGGTATCTACAGCCCCATACTACTCGTCTTACCCTGTAATGAGTAACCACCTCAAGTCGGGCCTGTACGTATGGGCTGGAGATGCCCGAAGCTTCAACAAAGAAGGCCCATACATTGAGTTGGTCACCTCTCCGAACAACCCTGATGGTTTTGTCAGGCACTCTATGGTGAATCGAACTGGAGGCATATTGGTACATGATTTGGCTTACTATTGGCCACAATATACCCCCATTTCCTCACCTGCAGATCATGATCTGACATTGTTCACCGTCTCAAAAGCCACTGGTCATGCCGGGACGCGCATTGGGTGGGCTCTAGTGAAAGATGCAGAAGTGGCCAAGAAAATGGTCAAGTTCATAGAGCTCAACACCATTGGCGTCTCCAGGGATTCACAGCTTCGAGCTGCCAAGATCTTGGAAGTCATGACCAACACCACCGAAATTGGCAGCTCGGATTCAGGGGAATCCTTCTTTGAGATAATCTACCACCTCATGGCAGAGAGGTGGCGGCTGCTTCAAGCGGCGGTGAACAATGGCAGTATGTTTAGTCTGCCTGACTTTGCACCAGGGTTCTGCCACTTCCTTCAACAGGAGACGCAGCCTCAACCTGCTTTCGCATGGCTCAAATGTGAAGATGATGCCGTGGAGGATTGCGAAAGCTTCCTGAAAGGGCACAAGATTTTGACGCGAGGAGGAAGAAGTTTTGGGGTTAGCCCAAAGTATGTCCGCATAAGCATGCTGGATAGGGACATTAACTTCAGTTTGTTTCTGAAGAGATTATCCATAATCCAGTCATGA

Protein Analysis

437

Amino Acids

48.91

Weight (kDa)

6.51

Isoelectric Point (pI)

47.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Alliinase_C PF04864 76 - 434 9.1e-148 Allinase
Aminotran_1_2 PF00155 121 - 419 7.2e-14 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 766
AasI GACNNNNNNGTC 1 cut(s) 181
Acc36I ACCTGC 3 cut(s) 370, 766, 1132
AccB7I CCANNNNNTGG 1 cut(s) 1009
AccII CGCG 2 cut(s) 817, 1204
AciI CCGC 4 cut(s) 1024, 1037, 1040, 1243
AclWI GGATC 1 cut(s) 508
AcoI YGGCCR 5 cut(s) 3, 141, 202, 731, 852
AcsI RAATTY 1 cut(s) 8
AcuI CTGAAG 4 cut(s) 164, 441, 1258, 1307
AcyI GRCGYC 1 cut(s) 894
AdeI CACNNNGTG 1 cut(s) 436
AfaI GTAC 2 cut(s) 584, 711
AfiI CCNNNNNNNGG 4 cut(s) 497, 574, 1009, 1105
AgsI TTSAA 3 cut(s) 613, 1034, 1103
AjnI CCWGG 3 cut(s) 231, 899, 1081
AjuI GAANNNNNNNTTGG 2 cut(s) 368, 400
Alw21I GWGCWC 1 cut(s) 882
Alw26I GTCTC 4 cut(s) 54, 793, 901, 1103
AlwI GGATC 1 cut(s) 508
Ama87I CYCGRG 1 cut(s) 365
AoxI GGCC 8 cut(s) 3, 141, 202, 424, 577, 622, 731, 852
ApeKI GCWGC 5 cut(s) 470, 920, 963, 1027, 1114
ApoI RAATTY 1 cut(s) 8
AspLEI GCGC 3 cut(s) 58, 475, 819
AspS9I GGNCC 4 cut(s) 131, 235, 577, 623
AsuC2I CCSGG 2 cut(s) 306, 811
AsuHPI GGTGA 8 cut(s) 107, 254, 293, 634, 697, 747, 775, 1054
AvaI CYCGRG 1 cut(s) 365
AvaII GGWCC 2 cut(s) 131, 235
BaeGI GKGCMC 1 cut(s) 1191
BalI TGGCCA 4 cut(s) 5, 204, 733, 854
BanII GRGCYC 4 cut(s) 366, 510, 832, 882
BbsI GAAGAC 1 cut(s) 153
Bbv12I GWGCWC 1 cut(s) 882
BbvI GCAGC 5 cut(s) 457, 907, 975, 1014, 1126
BccI CCATC 4 cut(s) 86, 142, 491, 656
BceAI ACGGC 3 cut(s) 398, 411, 1142
BciT130I CCWGG 3 cut(s) 233, 901, 1083
BcnI CCSGG 2 cut(s) 306, 811
BcoDI GTCTC 4 cut(s) 54, 793, 901, 1103
BfaI CTAG 1 cut(s) 833
BfmI CTRYAG 2 cut(s) 525, 759
BfoI RGCGCY 1 cut(s) 59
BfuAI ACCTGC 3 cut(s) 370, 766, 1132
BglI GCCNNNNNGGC 1 cut(s) 210
BglII AGATCT 1 cut(s) 927
BisI GCNGC 7 cut(s) 471, 921, 964, 1025, 1028, 1038, 1115
BlsI GCNGC 7 cut(s) 472, 922, 965, 1026, 1029, 1039, 1116
Bme1390I CCNGG 5 cut(s) 233, 306, 811, 901, 1083
Bme18I GGWCC 2 cut(s) 131, 235
BmeT110I CYCGRG 1 cut(s) 365
BmgT120I GGNCC 4 cut(s) 131, 235, 577, 623
BmiI GGNNCC 1 cut(s) 363
BmrFI CCNGG 5 cut(s) 233, 306, 811, 901, 1083
BmsI GCATC 3 cut(s) 589, 832, 1144
BpiI GAAGAC 1 cut(s) 153
BpmI CTGGAG 3 cut(s) 615, 717, 883
BpuEI CTTGAG 1 cut(s) 554
BpuMI CCSGG 2 cut(s) 306, 811
BsaAI YACGTR 1 cut(s) 586
BsaBI GATNNNNATC 1 cut(s) 768
BsaHI GRCGYC 1 cut(s) 894
BsaJI CCNNGG 6 cut(s) 117, 238, 305, 900, 1082, 1158
BsaXI ACNNNNNCTCC 2 cut(s) 353, 383
Bsc4I CCNNNNNNNGG 4 cut(s) 497, 574, 1009, 1105
Bse1I ACTGG 3 cut(s) 700, 805, 1306
Bse3DI GCAATG 1 cut(s) 415
Bse8I GATNNNNATC 1 cut(s) 768
BseBI CCWGG 3 cut(s) 233, 901, 1083
BseDI CCNNGG 6 cut(s) 117, 238, 305, 900, 1082, 1158
BseGI GGATG 1 cut(s) 276
BseJI GATNNNNATC 1 cut(s) 768
BseLI CCNNNNNNNGG 4 cut(s) 497, 574, 1009, 1105
BseMI GCAATG 1 cut(s) 415
BseMII CTCAG 4 cut(s) 5, 345, 470, 495
BseNI ACTGG 3 cut(s) 700, 805, 1306
BseRI GAGGAG 1 cut(s) 1221
BseSI GKGCMC 1 cut(s) 1191
BseXI GCAGC 5 cut(s) 457, 907, 975, 1014, 1126
Bsh1236I CGCG 2 cut(s) 817, 1204
BshFI GGCC 8 cut(s) 5, 143, 204, 426, 579, 624, 733, 854
BsiHKAI GWGCWC 1 cut(s) 882
BsiHKCI CYCGRG 1 cut(s) 365
BsiSI CCGG 2 cut(s) 305, 810
BslFI GGGAC 3 cut(s) 457, 826, 1277
BslI CCNNNNNNNGG 4 cut(s) 497, 574, 1009, 1105
BsmAI GTCTC 4 cut(s) 54, 793, 901, 1103
BsmBI CGTCTC 3 cut(s) 793, 901, 1103
BsmFI GGGAC 3 cut(s) 457, 826, 1277
BsnI GGCC 8 cut(s) 5, 143, 204, 426, 579, 624, 733, 854
BsoBI CYCGRG 1 cut(s) 365
Bsp1286I GDGCHC 5 cut(s) 366, 510, 832, 882, 1191
Bsp143I GATC 4 cut(s) 500, 763, 769, 927
Bsp19I CCATGG 1 cut(s) 238
BspACI CCGC 4 cut(s) 1024, 1037, 1040, 1243
BspANI GGCC 8 cut(s) 5, 143, 204, 426, 579, 624, 733, 854
BspCNI CTCAG 4 cut(s) 6, 344, 469, 496
BspFNI CGCG 2 cut(s) 817, 1204
BspHI TCATGA 3 cut(s) 766, 939, 1310
BspLI GGNNCC 1 cut(s) 363
BspMAI CTGCAG 1 cut(s) 763
BspMI ACCTGC 3 cut(s) 370, 766, 1132
BspPI GGATC 1 cut(s) 508
BsrDI GCAATG 1 cut(s) 415
BsrI ACTGG 3 cut(s) 700, 805, 1306
BssECI CCNNGG 6 cut(s) 117, 238, 305, 900, 1082, 1158
BssMI GATC 4 cut(s) 500, 763, 769, 927
BssNI GRCGYC 1 cut(s) 894
BssT1I CCWWGG 1 cut(s) 238
Bst2UI CCWGG 3 cut(s) 233, 901, 1083
Bst4CI ACNGT 2 cut(s) 295, 787
Bst6I CTCTTC 1 cut(s) 1283
BstACI GRCGYC 1 cut(s) 894
BstBAI YACGTR 1 cut(s) 586
BstC8I GCNNGC 1 cut(s) 1253
BstDEI CTNAG 5 cut(s) 14, 65, 331, 456, 504
BstDSI CCRYGG 3 cut(s) 117, 238, 1158
BstEII GGTNACC 2 cut(s) 242, 640
BstENI CCTNNNNNAGG 1 cut(s) 1103
BstF5I GGATG 1 cut(s) 276
BstFNI CGCG 2 cut(s) 817, 1204
BstH2I RGCGCY 1 cut(s) 59
BstHHI GCGC 3 cut(s) 58, 475, 819
BstKTI GATC 4 cut(s) 503, 766, 772, 930
BstMAI GTCTC 4 cut(s) 54, 793, 901, 1103
BstMBI GATC 4 cut(s) 500, 763, 769, 927
BstMWI GCNNNNNNNGC 4 cut(s) 210, 479, 599, 851
BstNI CCWGG 3 cut(s) 233, 901, 1083
BstNSI RCATGY 1 cut(s) 1255
BstPI GGTNACC 2 cut(s) 242, 640
BstSCI CCNGG 5 cut(s) 231, 304, 809, 899, 1081
BstSFI CTRYAG 2 cut(s) 525, 759
BstSLI GKGCMC 1 cut(s) 1191
BstSNI TACGTA 1 cut(s) 586
BstUI CGCG 2 cut(s) 817, 1204
BstV1I GCAGC 5 cut(s) 457, 907, 975, 1014, 1126
BstV2I GAAGAC 1 cut(s) 153
BstX2I RGATCY 2 cut(s) 500, 927
BstXI CCANNNNNNTGG 3 cut(s) 517, 862, 931
BstYI RGATCY 2 cut(s) 500, 927
BsuRI GGCC 8 cut(s) 5, 143, 204, 426, 579, 624, 733, 854
BtgI CCRYGG 3 cut(s) 117, 238, 1158
BtsCI GGATG 1 cut(s) 276
BtsIMutI CAGTG 2 cut(s) 417, 798
BveI ACCTGC 3 cut(s) 370, 766, 1132
Cac8I GCNNGC 1 cut(s) 1253
CciI TCATGA 3 cut(s) 766, 939, 1310
CfoI GCGC 3 cut(s) 58, 475, 819
Cfr13I GGNCC 4 cut(s) 131, 235, 577, 623
CseI GACGC 5 cut(s) 184, 823, 883, 1120, 1210
Csp6I GTAC 2 cut(s) 583, 710
CspCI CAANNNNNGTGG 2 cut(s) 940, 975
CviQI GTAC 2 cut(s) 583, 710
DdeI CTNAG 5 cut(s) 14, 65, 331, 456, 504
DpnI GATC 4 cut(s) 502, 765, 771, 929
DpnII GATC 4 cut(s) 500, 763, 769, 927
DraIII CACNNNGTG 1 cut(s) 436
DrdI GACNNNNNNGTC 1 cut(s) 181
DseDI GACNNNNNNGTC 1 cut(s) 181
EaeI YGGCCR 5 cut(s) 3, 141, 202, 731, 852
Eam1104I CTCTTC 1 cut(s) 1283
EarI CTCTTC 1 cut(s) 1283
Ecl136II GAGCTC 1 cut(s) 880
Eco105I TACGTA 1 cut(s) 586
Eco130I CCWWGG 1 cut(s) 238
Eco24I GRGCYC 4 cut(s) 366, 510, 832, 882
Eco47I GGWCC 2 cut(s) 131, 235
Eco53kI GAGCTC 1 cut(s) 880
Eco57I CTGAAG 4 cut(s) 164, 441, 1258, 1307
Eco88I CYCGRG 1 cut(s) 365
Eco91I GGTNACC 2 cut(s) 242, 640
EcoICRI GAGCTC 1 cut(s) 880
EcoNI CCTNNNNNAGG 1 cut(s) 1103
EcoO65I GGTNACC 2 cut(s) 242, 640
EcoRII CCWGG 3 cut(s) 231, 899, 1081
EcoT14I CCWWGG 1 cut(s) 238
EcoT38I GRGCYC 4 cut(s) 366, 510, 832, 882
ErhI CCWWGG 1 cut(s) 238
Esp3I CGTCTC 3 cut(s) 793, 901, 1103
FaqI GGGAC 3 cut(s) 457, 826, 1277
Fnu4HI GCNGC 7 cut(s) 471, 921, 964, 1025, 1028, 1038, 1115
FokI GGATG 1 cut(s) 283
FriOI GRGCYC 4 cut(s) 366, 510, 832, 882
Fsp4HI GCNGC 7 cut(s) 471, 921, 964, 1025, 1028, 1038, 1115
FspBI CTAG 1 cut(s) 833
GlaI GCGC 3 cut(s) 57, 474, 818
GluI GCNGC 7 cut(s) 471, 921, 964, 1025, 1028, 1038, 1115
GsuI CTGGAG 3 cut(s) 615, 717, 883
HaeII RGCGCY 1 cut(s) 59
HaeIII GGCC 8 cut(s) 5, 143, 204, 426, 579, 624, 733, 854
HapII CCGG 2 cut(s) 305, 810
HgaI GACGC 5 cut(s) 184, 823, 883, 1120, 1210
HhaI GCGC 3 cut(s) 58, 475, 819
Hin1I GRCGYC 1 cut(s) 894
Hin6I GCGC 3 cut(s) 56, 473, 817
HinP1I GCGC 3 cut(s) 56, 473, 817
HindIII AAGCTT 3 cut(s) 67, 607, 1174
HinfI GANTC 4 cut(s) 688, 905, 971, 980
HpaII CCGG 2 cut(s) 305, 810
HphI GGTGA 8 cut(s) 107, 254, 293, 634, 697, 747, 775, 1054
Hpy166II GTNNAC 2 cut(s) 783, 1045
Hpy188I TCNGA 9 cut(s) 15, 334, 389, 492, 505, 651, 774, 970, 1287
Hpy188III TCNNGA 4 cut(s) 767, 940, 1180, 1311
Hpy8I GTNNAC 2 cut(s) 783, 1045
HpyAV CCTTC 5 cut(s) 203, 416, 614, 994, 1109
HpyCH4III ACNGT 2 cut(s) 295, 787
HpyCH4IV ACGT 1 cut(s) 585
HpyCH4V TGCA 3 cut(s) 761, 845, 1079
HpyF10VI GCNNNNNNNGC 4 cut(s) 210, 479, 599, 851
HpyF3I CTNAG 5 cut(s) 14, 65, 331, 456, 504
HpySE526I ACGT 1 cut(s) 585
Hsp92I GRCGYC 1 cut(s) 894
HspAI GCGC 3 cut(s) 56, 473, 817
Kzo9I GATC 4 cut(s) 500, 763, 769, 927
LmnI GCTCC 2 cut(s) 121, 361
Lsp1109I GCAGC 5 cut(s) 457, 907, 975, 1014, 1126
LweI GCATC 3 cut(s) 589, 832, 1144
MaeI CTAG 1 cut(s) 833
MaeII ACGT 1 cut(s) 585
MaeIII GTNAC 5 cut(s) 242, 415, 428, 560, 640
MalI GATC 4 cut(s) 502, 765, 771, 929
MboI GATC 4 cut(s) 500, 763, 769, 927
MboII GAAGA 7 cut(s) 103, 158, 183, 186, 1160, 1224, 1300
MflI RGATCY 2 cut(s) 500, 927
MhlI GDGCHC 5 cut(s) 366, 510, 832, 882, 1191
MlsI TGGCCA 4 cut(s) 5, 204, 733, 854
MluCI AATT 3 cut(s) 8, 300, 957
MluNI TGGCCA 4 cut(s) 5, 204, 733, 854
Mox20I TGGCCA 4 cut(s) 5, 204, 733, 854
MscI TGGCCA 4 cut(s) 5, 204, 733, 854
MseI TTAA 3 cut(s) 228, 339, 1269
MslI CAYNNNNRTG 2 cut(s) 515, 1250
Msp20I TGGCCA 4 cut(s) 5, 204, 733, 854
MspI CCGG 2 cut(s) 305, 810
MspR9I CCNGG 5 cut(s) 233, 306, 811, 901, 1083
MvaI CCWGG 3 cut(s) 233, 901, 1083
MvnI CGCG 2 cut(s) 817, 1204
MwoI GCNNNNNNNGC 4 cut(s) 210, 479, 599, 851
NciI CCSGG 2 cut(s) 306, 811
NcoI CCATGG 1 cut(s) 238
NdeII GATC 4 cut(s) 500, 763, 769, 927
NlaIV GGNNCC 1 cut(s) 363
NmuCI GTSAC 4 cut(s) 242, 415, 428, 640
NspI RCATGY 1 cut(s) 1255
PaeI GCATGC 1 cut(s) 1255
PagI TCATGA 3 cut(s) 766, 939, 1310
PaqCI CACCTGC 1 cut(s) 766
PfeI GAWTC 4 cut(s) 688, 905, 971, 980
PflMI CCANNNNNTGG 1 cut(s) 1009
PkrI GCNGC 7 cut(s) 472, 922, 965, 1026, 1029, 1039, 1116
Ppu21I YACGTR 1 cut(s) 586
Psp124BI GAGCTC 1 cut(s) 882
Psp6I CCWGG 3 cut(s) 231, 899, 1081
PspEI GGTNACC 2 cut(s) 242, 640
PspGI CCWGG 3 cut(s) 231, 899, 1081
PspN4I GGNNCC 1 cut(s) 363
PspPI GGNCC 4 cut(s) 131, 235, 577, 623
PstI CTGCAG 1 cut(s) 763
PsuI RGATCY 2 cut(s) 500, 927
RsaI GTAC 2 cut(s) 584, 711
RsaNI GTAC 2 cut(s) 583, 710
RseI CAYNNNNRTG 2 cut(s) 515, 1250
SacI GAGCTC 1 cut(s) 882
SaqAI TTAA 3 cut(s) 228, 339, 1269
SatI GCNGC 7 cut(s) 471, 921, 964, 1025, 1028, 1038, 1115
Sau3AI GATC 4 cut(s) 500, 763, 769, 927
Sau96I GGNCC 4 cut(s) 131, 235, 577, 623
ScrFI CCNGG 5 cut(s) 233, 306, 811, 901, 1083
SduI GDGCHC 5 cut(s) 366, 510, 832, 882, 1191
SfaNI GCATC 3 cut(s) 589, 832, 1144
SfcI CTRYAG 2 cut(s) 525, 759
SinI GGWCC 2 cut(s) 131, 235
SmiMI CAYNNNNRTG 2 cut(s) 515, 1250
SmlI CTYRAG 1 cut(s) 569
SmoI CTYRAG 1 cut(s) 569
SnaBI TACGTA 1 cut(s) 586
SphI GCATGC 1 cut(s) 1255
Sse9I AATT 3 cut(s) 8, 300, 957
SsiI CCGC 4 cut(s) 1024, 1037, 1040, 1243
SspI AATATT 1 cut(s) 266
SspMI CTAG 1 cut(s) 833
SstI GAGCTC 1 cut(s) 882
StyD4I CCNGG 5 cut(s) 231, 304, 809, 899, 1081
StyI CCWWGG 1 cut(s) 238
TaaI ACNGT 2 cut(s) 295, 787
TaiI ACGT 1 cut(s) 588
TaqI TCGA 3 cut(s) 90, 691, 916
TasI AATT 3 cut(s) 8, 300, 957
TauI GCSGC 2 cut(s) 1027, 1040
TfiI GAWTC 4 cut(s) 688, 905, 971, 980
Tru1I TTAA 3 cut(s) 228, 339, 1269
Tru9I TTAA 3 cut(s) 228, 339, 1269
TscAI CASTG 2 cut(s) 424, 805
TseFI GTSAC 4 cut(s) 242, 415, 428, 640
TseI GCWGC 5 cut(s) 470, 920, 963, 1027, 1114
Tsp45I GTSAC 4 cut(s) 242, 415, 428, 640
TspDTI ATGAA 3 cut(s) 273, 441, 862
TspGWI ACGGA 1 cut(s) 106
TspRI CASTG 2 cut(s) 424, 805
Van91I CCANNNNNTGG 1 cut(s) 1009
VpaK11BI GGWCC 2 cut(s) 131, 235
XagI CCTNNNNNAGG 1 cut(s) 1103
XapI RAATTY 1 cut(s) 8
XceI RCATGY 1 cut(s) 1255
XspI CTAG 1 cut(s) 833
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.