Rh7CG135600

Tryptophan aminotransferase-related protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
10978095 .. 10983768
5674 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG135600.1

Sequence Viewer

Length: 1167 bp
ATGAATTTCCAAGAATTCTACATGAAGATACCAGCTTTATACTATGCTTGGCTGCTTGTTGAACATGCTATCACCTATTTATATGACAGTCATGGTGACCCGACTATGTATGAAAAATACTGGATGATGATGGGTGAGAGAACCACAGTTGTGATTCCTGGGTGGCACTCCATGAGCTATTTCTCAGATGTTAAAAACCTCTGCTGGTTTTTGGAGCCCGAGTTTGCCAAGCAGGTTTTCAGATTACACAGAGTTGTGGGCAATGCCGTCACTGAAGGCCGTCACATTGTGGTTGGGACAGGTTCATCTCAGCTCATTTTAGCTGCGCTTTTCGCTCTTTCTCCGAAAGATGGATCTGAGCCCATGAGTGTGGTATCTACAGCCCCATACTACTCGTCTTACCCTGTAATGAGTAACCACCTCAAGTCGGGCCTGTACGTCTGGGCTGGAGATGCCCGAAGCTTCAACAAAGAAGGCCCATACATTGAGTTGGTCACCTCTCCGAACAACCCTGATGGTTTTGTCAGGCACTCTATGGTGAATCGAACTGGAGGCATATTGGTACATGATTTGGCTTACTATTGGCCACAATATACCCCCATTTCCTCACCTGCAGATCATGATCTGACATTGTTCACCGTCTCAAAAGCCACTGGTCATGCCGGGACGCGCATTGGGTGGGCTCTAGTGAAAGATGCAGAAGTGGCCAAGAAAATGGTCAAGTTCATAGAGCTCAACACCATTGGCGTCTCCAGGGATTCACAGCTTCGAGCTGCCAAGATCTTGGAAGTCATGACCAACACCACCGAAATTGGCAGCTCGGATTCAGGGGAATCCTTCTTTGAGATAATCTACCACCTCATGGCAGAGAGGTGGCGGCTGCTTCAAGCGGCGGTGAACAATGGCAGTATGTTTAGTCTGCCTGACTTTGCACCAGGGTTCTGCCACTTCCTTCAACAGGAGACGCAGCCTCAACCTGCTTTCGCATGGCTCAAATGTGAAGATGATGCCGTGGAGGATTGCGAAAGCTTCCTGAAAGGGCACAAGATTTTGACGCGAGGAGGAAGAAGTTTTGGGGTTAGCCCAAAGTATGTCCGCATAAGCATGCTGGATAGGGACATTAACTTCAGTTTGTTTCTGAAGAGATTATCCATAATCCAGTCATGA

Protein Analysis

388

Amino Acids

43.87

Weight (kDa)

6.36

Isoelectric Point (pI)

51.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Alliinase_C PF04864 31 - 385 3.5e-147 Allinase
Aminotran_1_2 PF00155 72 - 370 5.2e-14 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 619
Acc36I ACCTGC 3 cut(s) 223, 619, 985
AccB7I CCANNNNNTGG 1 cut(s) 862
AccII CGCG 2 cut(s) 670, 1057
AciI CCGC 4 cut(s) 877, 890, 893, 1096
AclWI GGATC 1 cut(s) 361
AcoI YGGCCR 2 cut(s) 584, 705
AcsI RAATTY 2 cut(s) 4, 14
AcuI CTGAAG 3 cut(s) 294, 1111, 1160
AcyI GRCGYC 1 cut(s) 747
AdeI CACNNNGTG 1 cut(s) 289
AfaI GTAC 2 cut(s) 437, 564
AfiI CCNNNNNNNGG 4 cut(s) 350, 427, 862, 958
AgsI TTSAA 4 cut(s) 62, 466, 887, 956
AjnI CCWGG 3 cut(s) 157, 752, 934
AjuI GAANNNNNNNTTGG 2 cut(s) 221, 253
AleI CACNNNNGTG 1 cut(s) 149
Alw21I GWGCWC 1 cut(s) 735
Alw26I GTCTC 3 cut(s) 646, 754, 956
AlwI GGATC 1 cut(s) 361
Ama87I CYCGRG 1 cut(s) 218
AoxI GGCC 5 cut(s) 277, 430, 475, 584, 705
ApeKI GCWGC 6 cut(s) 52, 323, 773, 816, 880, 967
ApoI RAATTY 2 cut(s) 4, 14
AspLEI GCGC 2 cut(s) 328, 672
AspS9I GGNCC 2 cut(s) 430, 476
AsuC2I CCSGG 1 cut(s) 664
AsuHPI GGTGA 8 cut(s) 64, 107, 146, 487, 550, 600, 628, 907
AvaI CYCGRG 1 cut(s) 218
BaeGI GKGCMC 1 cut(s) 1044
BalI TGGCCA 2 cut(s) 586, 707
BanII GRGCYC 4 cut(s) 219, 363, 685, 735
Bbv12I GWGCWC 1 cut(s) 735
BbvI GCAGC 6 cut(s) 39, 310, 760, 828, 867, 979
BccI CCATC 3 cut(s) 124, 344, 509
BceAI ACGGC 3 cut(s) 251, 264, 995
BciT130I CCWGG 3 cut(s) 159, 754, 936
BcnI CCSGG 1 cut(s) 664
BcoDI GTCTC 3 cut(s) 646, 754, 956
BfaI CTAG 1 cut(s) 686
BfmI CTRYAG 2 cut(s) 378, 612
BfuAI ACCTGC 3 cut(s) 223, 619, 985
BglII AGATCT 1 cut(s) 780
BisI GCNGC 8 cut(s) 53, 324, 774, 817, 878, 881, 891, 968
BlsI GCNGC 8 cut(s) 54, 325, 775, 818, 879, 882, 892, 969
Bme1390I CCNGG 4 cut(s) 159, 664, 754, 936
BmeT110I CYCGRG 1 cut(s) 218
BmgT120I GGNCC 2 cut(s) 430, 476
BmiI GGNNCC 1 cut(s) 216
BmrFI CCNGG 4 cut(s) 159, 664, 754, 936
BmsI GCATC 3 cut(s) 442, 685, 997
BpmI CTGGAG 3 cut(s) 468, 570, 736
BpuEI CTTGAG 1 cut(s) 407
BpuMI CCSGG 1 cut(s) 664
BsaBI GATNNNNATC 1 cut(s) 621
BsaHI GRCGYC 1 cut(s) 747
BsaJI CCNNGG 4 cut(s) 158, 753, 935, 1011
BsaXI ACNNNNNCTCC 2 cut(s) 206, 236
Bsc4I CCNNNNNNNGG 4 cut(s) 350, 427, 862, 958
Bse1I ACTGG 4 cut(s) 125, 553, 658, 1159
Bse3DI GCAATG 1 cut(s) 268
Bse8I GATNNNNATC 1 cut(s) 621
BseBI CCWGG 3 cut(s) 159, 754, 936
BseDI CCNNGG 4 cut(s) 158, 753, 935, 1011
BseGI GGATG 1 cut(s) 129
BseJI GATNNNNATC 1 cut(s) 621
BseLI CCNNNNNNNGG 4 cut(s) 350, 427, 862, 958
BseMI GCAATG 1 cut(s) 268
BseMII CTCAG 3 cut(s) 198, 323, 348
BseNI ACTGG 4 cut(s) 125, 553, 658, 1159
BseRI GAGGAG 1 cut(s) 1074
BseSI GKGCMC 1 cut(s) 1044
BseXI GCAGC 6 cut(s) 39, 310, 760, 828, 867, 979
Bsh1236I CGCG 2 cut(s) 670, 1057
BshFI GGCC 5 cut(s) 279, 432, 477, 586, 707
BsiHKAI GWGCWC 1 cut(s) 735
BsiHKCI CYCGRG 1 cut(s) 218
BsiSI CCGG 1 cut(s) 663
BslFI GGGAC 3 cut(s) 310, 679, 1130
BslI CCNNNNNNNGG 4 cut(s) 350, 427, 862, 958
BsmAI GTCTC 3 cut(s) 646, 754, 956
BsmBI CGTCTC 3 cut(s) 646, 754, 956
BsmFI GGGAC 3 cut(s) 310, 679, 1130
BsnI GGCC 5 cut(s) 279, 432, 477, 586, 707
BsoBI CYCGRG 1 cut(s) 218
Bsp1286I GDGCHC 5 cut(s) 219, 363, 685, 735, 1044
Bsp143I GATC 4 cut(s) 353, 616, 622, 780
BspACI CCGC 4 cut(s) 877, 890, 893, 1096
BspANI GGCC 5 cut(s) 279, 432, 477, 586, 707
BspCNI CTCAG 3 cut(s) 197, 322, 349
BspFNI CGCG 2 cut(s) 670, 1057
BspHI TCATGA 3 cut(s) 619, 792, 1163
BspLI GGNNCC 1 cut(s) 216
BspMAI CTGCAG 1 cut(s) 616
BspMI ACCTGC 3 cut(s) 223, 619, 985
BspPI GGATC 1 cut(s) 361
BsrDI GCAATG 1 cut(s) 268
BsrI ACTGG 4 cut(s) 125, 553, 658, 1159
BssECI CCNNGG 4 cut(s) 158, 753, 935, 1011
BssMI GATC 4 cut(s) 353, 616, 622, 780
BssNI GRCGYC 1 cut(s) 747
Bst2UI CCWGG 3 cut(s) 159, 754, 936
Bst4CI ACNGT 3 cut(s) 89, 148, 640
Bst6I CTCTTC 1 cut(s) 1136
BstACI GRCGYC 1 cut(s) 747
BstC8I GCNNGC 1 cut(s) 1106
BstDEI CTNAG 3 cut(s) 184, 309, 357
BstDSI CCRYGG 1 cut(s) 1011
BstEII GGTNACC 2 cut(s) 95, 493
BstENI CCTNNNNNAGG 1 cut(s) 956
BstF5I GGATG 1 cut(s) 129
BstFNI CGCG 2 cut(s) 670, 1057
BstHHI GCGC 2 cut(s) 328, 672
BstKTI GATC 4 cut(s) 356, 619, 625, 783
BstMAI GTCTC 3 cut(s) 646, 754, 956
BstMBI GATC 4 cut(s) 353, 616, 622, 780
BstMWI GCNNNNNNNGC 3 cut(s) 332, 452, 704
BstNI CCWGG 3 cut(s) 159, 754, 936
BstNSI RCATGY 2 cut(s) 68, 1108
BstPI GGTNACC 2 cut(s) 95, 493
BstSCI CCNGG 4 cut(s) 157, 662, 752, 934
BstSFI CTRYAG 2 cut(s) 378, 612
BstSLI GKGCMC 1 cut(s) 1044
BstUI CGCG 2 cut(s) 670, 1057
BstV1I GCAGC 6 cut(s) 39, 310, 760, 828, 867, 979
BstX2I RGATCY 2 cut(s) 353, 780
BstXI CCANNNNNNTGG 3 cut(s) 370, 715, 784
BstYI RGATCY 2 cut(s) 353, 780
BsuRI GGCC 5 cut(s) 279, 432, 477, 586, 707
BtgI CCRYGG 1 cut(s) 1011
BtsCI GGATG 1 cut(s) 129
BtsIMutI CAGTG 2 cut(s) 270, 651
BveI ACCTGC 3 cut(s) 223, 619, 985
Cac8I GCNNGC 1 cut(s) 1106
CciI TCATGA 3 cut(s) 619, 792, 1163
CfoI GCGC 2 cut(s) 328, 672
Cfr13I GGNCC 2 cut(s) 430, 476
CseI GACGC 4 cut(s) 676, 736, 973, 1063
Csp6I GTAC 2 cut(s) 436, 563
CspCI CAANNNNNGTGG 2 cut(s) 793, 828
CviQI GTAC 2 cut(s) 436, 563
DdeI CTNAG 3 cut(s) 184, 309, 357
DpnI GATC 4 cut(s) 355, 618, 624, 782
DpnII GATC 4 cut(s) 353, 616, 622, 780
DraIII CACNNNGTG 1 cut(s) 289
EaeI YGGCCR 2 cut(s) 584, 705
Eam1104I CTCTTC 1 cut(s) 1136
EarI CTCTTC 1 cut(s) 1136
Ecl136II GAGCTC 1 cut(s) 733
Eco24I GRGCYC 4 cut(s) 219, 363, 685, 735
Eco53kI GAGCTC 1 cut(s) 733
Eco57I CTGAAG 3 cut(s) 294, 1111, 1160
Eco88I CYCGRG 1 cut(s) 218
Eco91I GGTNACC 2 cut(s) 95, 493
EcoICRI GAGCTC 1 cut(s) 733
EcoNI CCTNNNNNAGG 1 cut(s) 956
EcoO65I GGTNACC 2 cut(s) 95, 493
EcoRI GAATTC 1 cut(s) 14
EcoRII CCWGG 3 cut(s) 157, 752, 934
EcoT38I GRGCYC 4 cut(s) 219, 363, 685, 735
Esp3I CGTCTC 3 cut(s) 646, 754, 956
FaqI GGGAC 3 cut(s) 310, 679, 1130
Fnu4HI GCNGC 8 cut(s) 53, 324, 774, 817, 878, 881, 891, 968
FokI GGATG 1 cut(s) 136
FriOI GRGCYC 4 cut(s) 219, 363, 685, 735
Fsp4HI GCNGC 8 cut(s) 53, 324, 774, 817, 878, 881, 891, 968
FspBI CTAG 1 cut(s) 686
GlaI GCGC 2 cut(s) 327, 671
GluI GCNGC 8 cut(s) 53, 324, 774, 817, 878, 881, 891, 968
GsuI CTGGAG 3 cut(s) 468, 570, 736
HaeIII GGCC 5 cut(s) 279, 432, 477, 586, 707
HapII CCGG 1 cut(s) 663
HgaI GACGC 4 cut(s) 676, 736, 973, 1063
HhaI GCGC 2 cut(s) 328, 672
Hin1I GRCGYC 1 cut(s) 747
Hin6I GCGC 2 cut(s) 326, 670
HinP1I GCGC 2 cut(s) 326, 670
HindIII AAGCTT 2 cut(s) 460, 1027
HinfI GANTC 5 cut(s) 154, 541, 758, 824, 833
HpaII CCGG 1 cut(s) 663
HphI GGTGA 8 cut(s) 64, 107, 146, 487, 550, 600, 628, 907
Hpy166II GTNNAC 2 cut(s) 636, 898
Hpy188I TCNGA 8 cut(s) 187, 242, 345, 358, 504, 627, 823, 1140
Hpy188III TCNNGA 4 cut(s) 620, 793, 1033, 1164
Hpy8I GTNNAC 2 cut(s) 636, 898
HpyAV CCTTC 4 cut(s) 269, 467, 847, 962
HpyCH4III ACNGT 3 cut(s) 89, 148, 640
HpyCH4IV ACGT 1 cut(s) 438
HpyCH4V TGCA 3 cut(s) 614, 698, 932
HpyF10VI GCNNNNNNNGC 3 cut(s) 332, 452, 704
HpyF3I CTNAG 3 cut(s) 184, 309, 357
HpySE526I ACGT 1 cut(s) 438
Hsp92I GRCGYC 1 cut(s) 747
HspAI GCGC 2 cut(s) 326, 670
Kzo9I GATC 4 cut(s) 353, 616, 622, 780
LmnI GCTCC 1 cut(s) 214
Lsp1109I GCAGC 6 cut(s) 39, 310, 760, 828, 867, 979
LweI GCATC 3 cut(s) 442, 685, 997
MaeI CTAG 1 cut(s) 686
MaeII ACGT 1 cut(s) 438
MaeIII GTNAC 5 cut(s) 95, 268, 281, 413, 493
MalI GATC 4 cut(s) 355, 618, 624, 782
MboI GATC 4 cut(s) 353, 616, 622, 780
MboII GAAGA 4 cut(s) 37, 1013, 1077, 1153
MflI RGATCY 2 cut(s) 353, 780
MhlI GDGCHC 5 cut(s) 219, 363, 685, 735, 1044
MlsI TGGCCA 2 cut(s) 586, 707
MluCI AATT 3 cut(s) 4, 14, 810
MluNI TGGCCA 2 cut(s) 586, 707
Mox20I TGGCCA 2 cut(s) 586, 707
MscI TGGCCA 2 cut(s) 586, 707
MseI TTAA 2 cut(s) 192, 1122
MslI CAYNNNNRTG 3 cut(s) 149, 368, 1103
Msp20I TGGCCA 2 cut(s) 586, 707
MspI CCGG 1 cut(s) 663
MspR9I CCNGG 4 cut(s) 159, 664, 754, 936
MvaI CCWGG 3 cut(s) 159, 754, 936
MvnI CGCG 2 cut(s) 670, 1057
MwoI GCNNNNNNNGC 3 cut(s) 332, 452, 704
NciI CCSGG 1 cut(s) 664
NdeII GATC 4 cut(s) 353, 616, 622, 780
NlaIV GGNNCC 1 cut(s) 216
NmuCI GTSAC 4 cut(s) 95, 268, 281, 493
NspI RCATGY 2 cut(s) 68, 1108
OliI CACNNNNGTG 1 cut(s) 149
PaeI GCATGC 1 cut(s) 1108
PagI TCATGA 3 cut(s) 619, 792, 1163
PaqCI CACCTGC 1 cut(s) 619
PfeI GAWTC 5 cut(s) 154, 541, 758, 824, 833
PflMI CCANNNNNTGG 1 cut(s) 862
PkrI GCNGC 8 cut(s) 54, 325, 775, 818, 879, 882, 892, 969
Psp124BI GAGCTC 1 cut(s) 735
Psp6I CCWGG 3 cut(s) 157, 752, 934
PspEI GGTNACC 2 cut(s) 95, 493
PspGI CCWGG 3 cut(s) 157, 752, 934
PspN4I GGNNCC 1 cut(s) 216
PspPI GGNCC 2 cut(s) 430, 476
PstI CTGCAG 1 cut(s) 616
PsuI RGATCY 2 cut(s) 353, 780
RsaI GTAC 2 cut(s) 437, 564
RsaNI GTAC 2 cut(s) 436, 563
RseI CAYNNNNRTG 3 cut(s) 149, 368, 1103
SacI GAGCTC 1 cut(s) 735
SaqAI TTAA 2 cut(s) 192, 1122
SatI GCNGC 8 cut(s) 53, 324, 774, 817, 878, 881, 891, 968
Sau3AI GATC 4 cut(s) 353, 616, 622, 780
Sau96I GGNCC 2 cut(s) 430, 476
ScrFI CCNGG 4 cut(s) 159, 664, 754, 936
SduI GDGCHC 5 cut(s) 219, 363, 685, 735, 1044
SfaNI GCATC 3 cut(s) 442, 685, 997
SfcI CTRYAG 2 cut(s) 378, 612
SmiMI CAYNNNNRTG 3 cut(s) 149, 368, 1103
SmlI CTYRAG 1 cut(s) 422
SmoI CTYRAG 1 cut(s) 422
SphI GCATGC 1 cut(s) 1108
Sse9I AATT 3 cut(s) 4, 14, 810
SsiI CCGC 4 cut(s) 877, 890, 893, 1096
SspMI CTAG 1 cut(s) 686
SstI GAGCTC 1 cut(s) 735
StyD4I CCNGG 4 cut(s) 157, 662, 752, 934
TaaI ACNGT 3 cut(s) 89, 148, 640
TaiI ACGT 1 cut(s) 441
TaqI TCGA 2 cut(s) 544, 769
TasI AATT 3 cut(s) 4, 14, 810
TauI GCSGC 2 cut(s) 880, 893
TfiI GAWTC 5 cut(s) 154, 541, 758, 824, 833
Tru1I TTAA 2 cut(s) 192, 1122
Tru9I TTAA 2 cut(s) 192, 1122
TscAI CASTG 2 cut(s) 277, 658
TseFI GTSAC 4 cut(s) 95, 268, 281, 493
TseI GCWGC 6 cut(s) 52, 323, 773, 816, 880, 967
Tsp45I GTSAC 4 cut(s) 95, 268, 281, 493
TspDTI ATGAA 5 cut(s) 17, 38, 126, 294, 715
TspRI CASTG 2 cut(s) 277, 658
Van91I CCANNNNNTGG 1 cut(s) 862
XagI CCTNNNNNAGG 1 cut(s) 956
XapI RAATTY 2 cut(s) 4, 14
XceI RCATGY 2 cut(s) 68, 1108
XspI CTAG 1 cut(s) 686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.