Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0002684

Physical Location & Seq

Genomic Coordinates Forward (+)

56565105 .. 56568238

Gene Structure 3134 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00262540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGCTAACTTTTTCAGCATTTTCACAGTAAGGAATTTGCTTGTGCTGTCTCTGGCGCTCAATGTGAGCTTGATTATGAGGGCATTTTTCGATGGTGAGAAACAGGGCATCTTCTCTGTGGAGCAGAGAGGTCCGTCATTGGCTTCAGACAAGGAAACTCACGCAACCCAGAGGACCCTTCTGTCAGTTTCTTCTTCGTCTGATAATGAAGACATGGAAAGAGTCATCAATCTCAACCACGGTGACCCGACTATGTACGAAAAGTACTGGATGATGATGGGTGAGAGAACCACAGTTGTGATTCCTGGATGGCACTCCATGAGCTATTTCTCAGACGTTAAAAACCTCTGCTGGTTTCTGGAGCCCGAGTTTGCCAAGCAGGTTTTCAGACTACATAAATCGGTGGGCAACGCCGTCACTGAAGGCCGTCACATTGTGGTTGGGACAGGTTCATCTCAGCTCGTTTTAGCTGCACTTTTCGCTCTTTCTCTGAAAGATGGATCTGAGCCAATGAGTGTGGTATCTGCAGCCCCATACTACTCGTCTTACCCCGTGATGGCAAACTACCTCAAGTCGGGCTTGTACAACTGGGCTGGAGATGCCCAAAGCTTCGATAAGGAGGGCCCTTACATCGAGTTGATCACCTCTCCGAACAACCCTGATGGATTCATCAGGCAGCCTACGGTGAATCGAACTGGAGGTATATTGGTCCATGATTTGGCTTACTACTGGCCCCAATATACCCCCATTTCCTCACCGGCAGATCATGATCTGACATTGTTCACCGTCACAAAACTCACTGGTCATGCCGGGACGCGCATTGGGTGGGCTCTAGTGAAAGATCTAGAGGTTGCCAAGAAAATGGTCAAGTTCATAGAGCTCAACACCATTGGCGTCTGCAGGGTTTCACAGCTCCAAGCTGCCAAGATCTTGGAAGTACTGACCAGCACCACTGAAAAACTTGGCAGGTCGGATTCTGGCGAATCCTTCTTCAAGATAAGCTACCACCGCATGGCAGAGAGGTGGCGACTGCTTCGAGCGGTGGTGAACAATGGCAGTATGTTTAGTCTGCCTGAATTTGCACAAGGGTTCTGCCACTTCCTTCAACAGGAGACGCAGCCTCAACCTGCTTTCGCATGGCTCAAATGTGAAGACGATGCAGTGGAGGATTGCGAAAGCTTCCTGAGAGGGCACAAGATTTTGACCCGAGGAGGAAGACAGTTTGGGGTTTCCCCAAAGTCCGCCATAATAACGCCACCAATAGTCCACAATGTTGAAGCCCATGGCCCTTTTAGCTCAGTCTCTTTATACCAGGCTACCTTCGGTGTCTCGGTACATACAAAGCAAATCCAAAACCCTAGGGGAGCGGAGAACGGTCAAGAATCGCAGCAAGCAATGTCGATGTCGAAGAGCTCCAAGATGCTTCAATTCATCAACTACCGCATGCGGGTCACAATCCAAGACGGACGCCAGCTCGTCGGCAAGTTCATGGCCTTCGACCGCCACATGAACCTCGTCCTCGGCGACTGCGAGGAGTTCCGCAAGCTCCCCCGGCGAAAGGCAAGAAGACCAACGAAGAACGCGACGACCGCCGCACTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006950 GO:0006952 GO:0007154 GO:0007275 GO:0008150 GO:0008483 GO:0009605 GO:0009606 GO:0009607 GO:0009617 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009791 GO:0009888 GO:0009908 GO:0009958 GO:0009987 GO:0009991 GO:0010015 GO:0010033 GO:0010073 GO:0010074 GO:0010078 GO:0010087 GO:0012505 GO:0016020 GO:0016740 GO:0016769 GO:0019827 GO:0022414 GO:0022622 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0032501 GO:0032502 GO:0042175 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043562 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048367 GO:0048438 GO:0048467 GO:0048507 GO:0048527 GO:0048528 GO:0048608 GO:0048731 GO:0048856 GO:0050362 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0070529 GO:0071496 GO:0080097 GO:0090567 GO:0090696 GO:0098542 GO:0098727 GO:0098827 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00380 ko01100 map00380 map01100

Pfam Domains

Protein Families

Alliinase_C

Protein Analysis

533

Amino Acids

59.75

Weight (kDa)

8.93

Isoelectric Point (pI)

44.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Alliinase_C	PF04864	76 - 413	4e-136	Allinase
Aminotran_1_2	PF00155	121 - 312	2.5e-11	Aminotransferase class I and II
LSM	PF01423	474 - 515	1.6e-11	LSM domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002684)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24670 AT4G24670
fragaria_vesca	FvH4_5g05880 FvH4_5g05880 FvH4_5g05880 FvH4_5g05900 FvH4_7g02760 FvH4_7g02760
malus_domestica	MD06G1169600.v1.1 MD14G1175000.v1.1
prunus_persica	Prupe.5G168300_v2.0.a1 Prupe.5G168300_v2.0.a1 Prupe.5G168300_v2.0.a1 Prupe.5G168300_v2.0.a1
pyrus_communis	pycom06g15090
rosa_chinensis	RchiOBHm_Chr7g0192931 RchiOBHm_Chr7g0192941
rosa_laevigata	RLG00000004311 RLG00000004312
rosa_multiflora	Rmu_co8488627.1_g000001 Rmu_sc0002040.1_g000057 Rmu_sc0002040.1_g000058
rosa_roxburghii	Rroxscaffold_3G00262530 Rroxscaffold_3G00262540
rosa_rugosa	Rorug07G0005900 Rorug07G0006000 Rorug07G0006100 Rorug07G0006200 Rorug07G0006300 Rorug07G0006400
rosa_samantha	Rh7AG131400 Rh7AG131500 Rh7BG132200 Rh7BG132300 Rh7CG135500 Rh7CG135600 Rh7DG133400 Rh7DG133500
rosa_wichuraiana	Rw7G011210 Rw7G011220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	181
Acc36I	ACCTGC	3 cut(s)	370, 957, 1135
AccB7I	CCANNNNNTGG	2 cut(s)	718, 1012
AccBSI	CCGCTC	2 cut(s)	1040, 1367
AccII	CGCG	2 cut(s)	817, 1583
AclWI	GGATC	1 cut(s)	508
AcsI	RAATTY	2 cut(s)	34, 1076
AcuI	CTGAAG	2 cut(s)	129, 441
AcyI	GRCGYC	2 cut(s)	894, 1468
AdeI	CACNNNGTG	1 cut(s)	436
AfaI	GTAC	5 cut(s)	257, 266, 584, 939, 1335
AfiI	CCNNNNNNNGG	7 cut(s)	556, 574, 718, 1012, 1108, 1447, 1558
AgsI	TTSAA	4 cut(s)	994, 1106, 1277, 1427
AjnI	CCWGG	2 cut(s)	304, 1311
AjuI	GAANNNNNNNTTGG	2 cut(s)	368, 400
AleI	CACNNNNGTG	1 cut(s)	296
Alw21I	GWGCWC	2 cut(s)	882, 1415
Alw26I	GTCTC	4 cut(s)	54, 1106, 1306, 1333
AlwI	GGATC	1 cut(s)	508
Ama87I	CYCGRG	2 cut(s)	365, 1206
AoxI	GGCC	5 cut(s)	424, 622, 731, 1285, 1491
ApaI	GGGCCC	1 cut(s)	626
ApeKI	GCWGC	6 cut(s)	470, 527, 676, 920, 1117, 1387
ApoI	RAATTY	2 cut(s)	34, 1076
AspA2I	CCTAGG	1 cut(s)	1358
AspLEI	GCGC	2 cut(s)	58, 819
AspS9I	GGNCC	7 cut(s)	131, 174, 622, 623, 709, 732, 1286
AsuC2I	CCSGG	2 cut(s)	811, 1552
AsuHPI	GGTGA	8 cut(s)	107, 254, 293, 634, 697, 747, 775, 1057
AvaI	CYCGRG	2 cut(s)	365, 1206
AvaII	GGWCC	3 cut(s)	131, 174, 709
AvrII	CCTAGG	1 cut(s)	1358
BaeGI	GKGCMC	2 cut(s)	626, 1194
BanII	GRGCYC	5 cut(s)	366, 626, 832, 882, 1415
BbsI	GAAGAC	4 cut(s)	216, 1158, 1222, 1573
Bbv12I	GWGCWC	2 cut(s)	882, 1415
BbvI	GCAGC	6 cut(s)	457, 539, 688, 907, 1129, 1399
BccI	CCATC	6 cut(s)	86, 271, 303, 491, 550, 656
BceAI	ACGGC	2 cut(s)	398, 411
BciT130I	CCWGG	2 cut(s)	306, 1313
BclI	TGATCA	1 cut(s)	639
BcnI	CCSGG	2 cut(s)	811, 1552
BcoDI	GTCTC	4 cut(s)	54, 1106, 1306, 1333
BfaI	CTAG	4 cut(s)	833, 845, 1359, 1600
BfmI	CTRYAG	2 cut(s)	525, 898
BfoI	RGCGCY	1 cut(s)	59
BfuAI	ACCTGC	3 cut(s)	370, 957, 1135
BglII	AGATCT	2 cut(s)	841, 927
BisI	GCNGC	7 cut(s)	471, 528, 677, 921, 1118, 1388, 1593
BlnI	CCTAGG	1 cut(s)	1358
BlsI	GCNGC	7 cut(s)	472, 529, 678, 922, 1119, 1389, 1594
BmcAI	AGTACT	2 cut(s)	266, 939
Bme1390I	CCNGG	4 cut(s)	306, 811, 1313, 1552
Bme18I	GGWCC	3 cut(s)	131, 174, 709
BmeT110I	CYCGRG	2 cut(s)	365, 1206
BmgT120I	GGNCC	7 cut(s)	131, 174, 622, 623, 709, 732, 1286
BmiI	GGNNCC	4 cut(s)	176, 363, 624, 734
BmrFI	CCNGG	4 cut(s)	306, 811, 1313, 1552
BmrI	ACTGGG	1 cut(s)	598
BmsI	GCATC	4 cut(s)	117, 589, 1147, 1410
BmuI	ACTGGG	1 cut(s)	598
BpiI	GAAGAC	4 cut(s)	216, 1158, 1222, 1573
BpmI	CTGGAG	3 cut(s)	380, 615, 717
BpuEI	CTTGAG	1 cut(s)	554
BpuMI	CCSGG	2 cut(s)	811, 1552
BsaBI	GATNNNNATC	1 cut(s)	768
BsaHI	GRCGYC	2 cut(s)	894, 1468
BsaJI	CCNNGG	6 cut(s)	238, 1207, 1282, 1358, 1519, 1550
BsaXI	ACNNNNNCTCC	2 cut(s)	353, 383
Bsc4I	CCNNNNNNNGG	7 cut(s)	556, 574, 718, 1012, 1108, 1447, 1558
Bse118I	RCCGGY	1 cut(s)	757
Bse1I	ACTGG	5 cut(s)	272, 593, 700, 734, 805
Bse3DI	GCAATG	1 cut(s)	1401
Bse8I	GATNNNNATC	1 cut(s)	768
BseBI	CCWGG	2 cut(s)	306, 1313
BseDI	CCNNGG	6 cut(s)	238, 1207, 1282, 1358, 1519, 1550
BseGI	GGATG	2 cut(s)	276, 314
BseJI	GATNNNNATC	1 cut(s)	768
BseLI	CCNNNNNNNGG	7 cut(s)	556, 574, 718, 1012, 1108, 1447, 1558
BseMI	GCAATG	1 cut(s)	1401
BseMII	CTCAG	5 cut(s)	345, 470, 495, 1175, 1311
BseNI	ACTGG	5 cut(s)	272, 593, 700, 734, 805
BseRI	GAGGAG	2 cut(s)	1224, 1547
BseSI	GKGCMC	2 cut(s)	626, 1194
BseXI	GCAGC	6 cut(s)	457, 539, 688, 907, 1129, 1399
BsgI	GTGCAG	1 cut(s)	456
Bsh1236I	CGCG	2 cut(s)	817, 1583
Bsh1285I	CGRYCG	2 cut(s)	1501, 1590
BshFI	GGCC	5 cut(s)	426, 624, 733, 1287, 1493
BsiEI	CGRYCG	2 cut(s)	1501, 1590
BsiHKAI	GWGCWC	2 cut(s)	882, 1415
BsiHKCI	CYCGRG	2 cut(s)	365, 1206
BsiSI	CCGG	3 cut(s)	758, 810, 1552
BslFI	GGGAC	2 cut(s)	457, 826
BslI	CCNNNNNNNGG	7 cut(s)	556, 574, 718, 1012, 1108, 1447, 1558
BsmAI	GTCTC	4 cut(s)	54, 1106, 1306, 1333
BsmBI	CGTCTC	1 cut(s)	1106
BsmFI	GGGAC	2 cut(s)	457, 826
BsnI	GGCC	5 cut(s)	426, 624, 733, 1287, 1493
BsoBI	CYCGRG	2 cut(s)	365, 1206
Bsp120I	GGGCCC	1 cut(s)	622
Bsp1286I	GDGCHC	6 cut(s)	366, 626, 832, 882, 1194, 1415
Bsp1407I	TGTACA	1 cut(s)	582
Bsp143I	GATC	6 cut(s)	500, 639, 763, 769, 841, 927
Bsp19I	CCATGG	1 cut(s)	1282
BspANI	GGCC	5 cut(s)	426, 624, 733, 1287, 1493
BspCNI	CTCAG	5 cut(s)	344, 469, 496, 1176, 1310
BspFNI	CGCG	2 cut(s)	817, 1583
BspHI	TCATGA	1 cut(s)	766
BspLI	GGNNCC	4 cut(s)	176, 363, 624, 734
BspMAI	CTGCAG	2 cut(s)	529, 902
BspMI	ACCTGC	3 cut(s)	370, 957, 1135
BspPI	GGATC	1 cut(s)	508
BspQI	GCTCTTC	1 cut(s)	1403
BsrBI	CCGCTC	2 cut(s)	1040, 1367
BsrDI	GCAATG	1 cut(s)	1401
BsrFI	RCCGGY	1 cut(s)	757
BsrGI	TGTACA	1 cut(s)	582
BsrI	ACTGG	5 cut(s)	272, 593, 700, 734, 805
BssAI	RCCGGY	1 cut(s)	757
BssECI	CCNNGG	6 cut(s)	238, 1207, 1282, 1358, 1519, 1550
BssMI	GATC	6 cut(s)	500, 639, 763, 769, 841, 927
BssNI	GRCGYC	2 cut(s)	894, 1468
BssT1I	CCWWGG	2 cut(s)	1282, 1358
Bst2UI	CCWGG	2 cut(s)	306, 1313
Bst4CI	ACNGT	7 cut(s)	28, 242, 295, 685, 787, 1221, 1376
Bst6I	CTCTTC	1 cut(s)	1403
BstACI	GRCGYC	2 cut(s)	894, 1468
BstAUI	TGTACA	1 cut(s)	582
BstC8I	GCNNGC	4 cut(s)	1392, 1445, 1472, 1544
BstDEI	CTNAG	5 cut(s)	331, 456, 504, 1184, 1297
BstDSI	CCRYGG	2 cut(s)	238, 1282
BstEII	GGTNACC	1 cut(s)	242
BstENI	CCTNNNNNAGG	1 cut(s)	1106
BstF5I	GGATG	2 cut(s)	276, 314
BstFNI	CGCG	2 cut(s)	817, 1583
BstH2I	RGCGCY	1 cut(s)	59
BstHHI	GCGC	2 cut(s)	58, 819
BstKTI	GATC	6 cut(s)	503, 642, 766, 772, 844, 930
BstMAI	GTCTC	4 cut(s)	54, 1106, 1306, 1333
BstMBI	GATC	6 cut(s)	500, 639, 763, 769, 841, 927
BstMCI	CGRYCG	2 cut(s)	1501, 1590
BstMWI	GCNNNNNNNGC	6 cut(s)	479, 599, 1008, 1293, 1552, 1589
BstNI	CCWGG	2 cut(s)	306, 1313
BstNSI	RCATGY	1 cut(s)	1447
BstPI	GGTNACC	1 cut(s)	242
BstSCI	CCNGG	4 cut(s)	304, 809, 1311, 1550
BstSFI	CTRYAG	2 cut(s)	525, 898
BstSLI	GKGCMC	2 cut(s)	626, 1194
BstUI	CGCG	2 cut(s)	817, 1583
BstV1I	GCAGC	6 cut(s)	457, 539, 688, 907, 1129, 1399
BstV2I	GAAGAC	4 cut(s)	216, 1158, 1222, 1573
BstX2I	RGATCY	3 cut(s)	500, 841, 927
BstXI	CCANNNNNNTGG	2 cut(s)	862, 931
BstYI	RGATCY	3 cut(s)	500, 841, 927
BsuRI	GGCC	5 cut(s)	426, 624, 733, 1287, 1493
BtgI	CCRYGG	2 cut(s)	238, 1282
BtsCI	GGATG	2 cut(s)	276, 314
BtsI	GCAGTG	1 cut(s)	1167
BtsIMutI	CAGTG	4 cut(s)	417, 798, 951, 1167
BveI	ACCTGC	3 cut(s)	370, 957, 1135
Cac8I	GCNNGC	4 cut(s)	1392, 1445, 1472, 1544
CciI	TCATGA	1 cut(s)	766
CfoI	GCGC	2 cut(s)	58, 819
Cfr10I	RCCGGY	1 cut(s)	757
Cfr13I	GGNCC	7 cut(s)	131, 174, 622, 623, 709, 732, 1286
CseI	GACGC	4 cut(s)	823, 883, 1123, 1476
Csp6I	GTAC	5 cut(s)	256, 265, 583, 938, 1334
CspCI	CAANNNNNGTGG	2 cut(s)	498, 533
CviQI	GTAC	5 cut(s)	256, 265, 583, 938, 1334
DdeI	CTNAG	5 cut(s)	331, 456, 504, 1184, 1297
DpnI	GATC	6 cut(s)	502, 641, 765, 771, 843, 929
DpnII	GATC	6 cut(s)	500, 639, 763, 769, 841, 927
DraIII	CACNNNGTG	1 cut(s)	436
DrdI	GACNNNNNNGTC	1 cut(s)	181
DseDI	GACNNNNNNGTC	1 cut(s)	181
Eam1104I	CTCTTC	1 cut(s)	1403
EarI	CTCTTC	1 cut(s)	1403
EciI	GGCGGA	1 cut(s)	1231
Ecl136II	GAGCTC	2 cut(s)	880, 1413
Eco130I	CCWWGG	2 cut(s)	1282, 1358
Eco24I	GRGCYC	5 cut(s)	366, 626, 832, 882, 1415
Eco47I	GGWCC	3 cut(s)	131, 174, 709
Eco53kI	GAGCTC	2 cut(s)	880, 1413
Eco57I	CTGAAG	2 cut(s)	129, 441
Eco88I	CYCGRG	2 cut(s)	365, 1206
Eco91I	GGTNACC	1 cut(s)	242
EcoICRI	GAGCTC	2 cut(s)	880, 1413
EcoNI	CCTNNNNNAGG	1 cut(s)	1106
EcoO109I	RGGNCCY	3 cut(s)	174, 622, 623
EcoO65I	GGTNACC	1 cut(s)	242
EcoRII	CCWGG	2 cut(s)	304, 1311
EcoT14I	CCWWGG	2 cut(s)	1282, 1358
EcoT38I	GRGCYC	5 cut(s)	366, 626, 832, 882, 1415
ErhI	CCWWGG	2 cut(s)	1282, 1358
Esp3I	CGTCTC	1 cut(s)	1106
FalI	AAGNNNNNCTT	2 cut(s)	563, 595
FaqI	GGGAC	2 cut(s)	457, 826
FauI	CCCGC	1 cut(s)	1440
FbaI	TGATCA	1 cut(s)	639
Fnu4HI	GCNGC	7 cut(s)	471, 528, 677, 921, 1118, 1388, 1593
FokI	GGATG	2 cut(s)	283, 321
FriOI	GRGCYC	5 cut(s)	366, 626, 832, 882, 1415
Fsp4HI	GCNGC	7 cut(s)	471, 528, 677, 921, 1118, 1388, 1593
FspBI	CTAG	4 cut(s)	833, 845, 1359, 1600
GlaI	GCGC	2 cut(s)	57, 818
GluI	GCNGC	7 cut(s)	471, 528, 677, 921, 1118, 1388, 1593
GsuI	CTGGAG	3 cut(s)	380, 615, 717
HaeII	RGCGCY	1 cut(s)	59
HaeIII	GGCC	5 cut(s)	426, 624, 733, 1287, 1493
HapII	CCGG	3 cut(s)	758, 810, 1552
HgaI	GACGC	4 cut(s)	823, 883, 1123, 1476
HhaI	GCGC	2 cut(s)	58, 819
Hin1I	GRCGYC	2 cut(s)	894, 1468
Hin6I	GCGC	2 cut(s)	56, 817
HinP1I	GCGC	2 cut(s)	56, 817
HindIII	AAGCTT	2 cut(s)	607, 1177
HinfI	GANTC	7 cut(s)	222, 301, 666, 688, 974, 983, 1382
HpaII	CCGG	3 cut(s)	758, 810, 1552
HphI	GGTGA	8 cut(s)	107, 254, 293, 634, 697, 747, 775, 1057
Hpy166II	GTNNAC	3 cut(s)	783, 1048, 1267
Hpy188I	TCNGA	9 cut(s)	148, 202, 334, 389, 492, 505, 651, 774, 973
Hpy188III	TCNNGA	6 cut(s)	359, 767, 845, 994, 1183, 1379
Hpy8I	GTNNAC	3 cut(s)	783, 1048, 1267
Hpy99I	CGWCG	2 cut(s)	1481, 1588
HpyAV	CCTTC	6 cut(s)	188, 416, 997, 1112, 1330, 1504
HpyCH4III	ACNGT	7 cut(s)	28, 242, 295, 685, 787, 1221, 1376
HpyCH4IV	ACGT	1 cut(s)	336
HpyCH4V	TGCA	5 cut(s)	473, 527, 900, 1082, 1160
HpyF10VI	GCNNNNNNNGC	6 cut(s)	479, 599, 1008, 1293, 1552, 1589
HpyF3I	CTNAG	5 cut(s)	331, 456, 504, 1184, 1297
HpySE526I	ACGT	1 cut(s)	336
Hsp92I	GRCGYC	2 cut(s)	894, 1468
HspAI	GCGC	2 cut(s)	56, 817
Ksp22I	TGATCA	1 cut(s)	639
Kzo9I	GATC	6 cut(s)	500, 639, 763, 769, 841, 927
LguI	GCTCTTC	1 cut(s)	1403
LmnI	GCTCC	6 cut(s)	121, 361, 918, 1364, 1418, 1551
Lsp1109I	GCAGC	6 cut(s)	457, 539, 688, 907, 1129, 1399
LweI	GCATC	4 cut(s)	117, 589, 1147, 1410
MaeI	CTAG	4 cut(s)	833, 845, 1359, 1600
MaeII	ACGT	1 cut(s)	336
MaeIII	GTNAC	5 cut(s)	242, 415, 428, 787, 1450
MalI	GATC	6 cut(s)	502, 641, 765, 771, 843, 929
MbiI	CCGCTC	2 cut(s)	1040, 1367
MboI	GATC	6 cut(s)	500, 639, 763, 769, 841, 927
MflI	RGATCY	3 cut(s)	500, 841, 927
MhlI	GDGCHC	6 cut(s)	366, 626, 832, 882, 1194, 1415
MluCI	AATT	3 cut(s)	34, 1076, 1427
MlyI	GAGTC	1 cut(s)	231
MmeI	TCCRAC	1 cut(s)	951
MseI	TTAA	1 cut(s)	339
MslI	CAYNNNNRTG	1 cut(s)	296
MspI	CCGG	3 cut(s)	758, 810, 1552
MspR9I	CCNGG	4 cut(s)	306, 811, 1313, 1552
MvaI	CCWGG	2 cut(s)	306, 1313
MvnI	CGCG	2 cut(s)	817, 1583
MwoI	GCNNNNNNNGC	6 cut(s)	479, 599, 1008, 1293, 1552, 1589
NciI	CCSGG	2 cut(s)	811, 1552
NcoI	CCATGG	1 cut(s)	1282
NdeII	GATC	6 cut(s)	500, 639, 763, 769, 841, 927
NlaIV	GGNNCC	4 cut(s)	176, 363, 624, 734
NmeAIII	GCCGAG	1 cut(s)	1500
NmuCI	GTSAC	5 cut(s)	242, 415, 428, 787, 1450
NspI	RCATGY	1 cut(s)	1447
OliI	CACNNNNGTG	1 cut(s)	296
PaeI	GCATGC	1 cut(s)	1447
PagI	TCATGA	1 cut(s)	766
PciSI	GCTCTTC	1 cut(s)	1403
PcsI	WCGNNNNNNNCGW	3 cut(s)	1521, 1527, 1580
PfeI	GAWTC	6 cut(s)	301, 666, 688, 974, 983, 1382
PflMI	CCANNNNNTGG	2 cut(s)	718, 1012
PfoI	TCCNGGA	1 cut(s)	304
PkrI	GCNGC	7 cut(s)	472, 529, 678, 922, 1119, 1389, 1594
PleI	GAGTC	1 cut(s)	230
PpsI	GAGTC	1 cut(s)	230
PpuMI	RGGWCCY	1 cut(s)	174
Psp124BI	GAGCTC	2 cut(s)	882, 1415
Psp5II	RGGWCCY	1 cut(s)	174
Psp6I	CCWGG	2 cut(s)	304, 1311
PspEI	GGTNACC	1 cut(s)	242
PspGI	CCWGG	2 cut(s)	304, 1311
PspN4I	GGNNCC	4 cut(s)	176, 363, 624, 734
PspOMI	GGGCCC	1 cut(s)	622
PspPI	GGNCC	7 cut(s)	131, 174, 622, 623, 709, 732, 1286
PspPPI	RGGWCCY	1 cut(s)	174
PstI	CTGCAG	2 cut(s)	529, 902
PsuI	RGATCY	3 cut(s)	500, 841, 927
RsaI	GTAC	5 cut(s)	257, 266, 584, 939, 1335
RsaNI	GTAC	5 cut(s)	256, 265, 583, 938, 1334
RseI	CAYNNNNRTG	1 cut(s)	296
SacI	GAGCTC	2 cut(s)	882, 1415
SapI	GCTCTTC	1 cut(s)	1403
SaqAI	TTAA	1 cut(s)	339
SatI	GCNGC	7 cut(s)	471, 528, 677, 921, 1118, 1388, 1593
Sau3AI	GATC	6 cut(s)	500, 639, 763, 769, 841, 927
Sau96I	GGNCC	7 cut(s)	131, 174, 622, 623, 709, 732, 1286
ScaI	AGTACT	2 cut(s)	266, 939
SchI	GAGTC	1 cut(s)	231
ScrFI	CCNGG	4 cut(s)	306, 811, 1313, 1552
SduI	GDGCHC	6 cut(s)	366, 626, 832, 882, 1194, 1415
SfaNI	GCATC	4 cut(s)	117, 589, 1147, 1410
SfcI	CTRYAG	2 cut(s)	525, 898
SinI	GGWCC	3 cut(s)	131, 174, 709
SmiMI	CAYNNNNRTG	1 cut(s)	296
SmlI	CTYRAG	1 cut(s)	569
SmoI	CTYRAG	1 cut(s)	569
SphI	GCATGC	1 cut(s)	1447
Sse9I	AATT	3 cut(s)	34, 1076, 1427
SspMI	CTAG	4 cut(s)	833, 845, 1359, 1600
SstI	GAGCTC	2 cut(s)	882, 1415
StyD4I	CCNGG	4 cut(s)	304, 809, 1311, 1550
StyI	CCWWGG	2 cut(s)	1282, 1358
TaaI	ACNGT	7 cut(s)	28, 242, 295, 685, 787, 1221, 1376
TaiI	ACGT	1 cut(s)	339
TaqI	TCGA	8 cut(s)	90, 612, 633, 691, 1036, 1400, 1406, 1497
TasI	AATT	3 cut(s)	34, 1076, 1427
TatI	WGTACW	3 cut(s)	264, 582, 937
TauI	GCSGC	1 cut(s)	1595
TfiI	GAWTC	6 cut(s)	301, 666, 688, 974, 983, 1382
Tru1I	TTAA	1 cut(s)	339
Tru9I	TTAA	1 cut(s)	339
TscAI	CASTG	4 cut(s)	424, 805, 958, 1167
TseFI	GTSAC	5 cut(s)	242, 415, 428, 787, 1450
TseI	GCWGC	6 cut(s)	470, 527, 676, 920, 1117, 1387
Tsp45I	GTSAC	5 cut(s)	242, 415, 428, 787, 1450
TspDTI	ATGAA	7 cut(s)	222, 441, 658, 862, 1420, 1477, 1523
TspGWI	ACGGA	2 cut(s)	123, 1479
TspRI	CASTG	4 cut(s)	424, 805, 958, 1167
Van91I	CCANNNNNTGG	2 cut(s)	718, 1012
VpaK11BI	GGWCC	3 cut(s)	131, 174, 709
XagI	CCTNNNNNAGG	1 cut(s)	1106
XapI	RAATTY	2 cut(s)	34, 1076
XbaI	TCTAGA	1 cut(s)	844
XceI	RCATGY	1 cut(s)	1447
XmaJI	CCTAGG	1 cut(s)	1358
XspI	CTAG	4 cut(s)	833, 845, 1359, 1600
ZrmI	AGTACT	2 cut(s)	266, 939

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.