Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0009497

Physical Location & Seq

Genomic Coordinates Forward (+)

15201172 .. 15205571

Gene Structure 4400 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G181900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2745 bp

ATGACCCTCTCCCCAGCTCTCTCCATTTCCAGCTCTTCGCCTCTCCCCGCCTCACTTTCCAACCTTAAGCCTAAGTCCCACCATCTCTCAGTCGTCACTAAAACCCCGGACTCATCCGTACACCGGAGATTCCTATCCGGCCACCGTAATTTCCTCTCCGGAGACCGGCGGTTGGCGTTCTCGGCTAGGGCGAAGCCGAAGGATCTCATCCTTGGGAACCCGTCGGTGACAGTCGAGAAGGGGAAGTACAGCTACGACGTCGAAACCCTAATCAACAAGCTCAGCAGCCTCCCTCCCCGAGGCAGCATAGCTCGGTGTCTCGACATCTTCAAGAATAAACTGTCGCTAAACGACTTCGCTTTGGTGTTCAAGGAGTTCGCGGCGCGCGGCGATTGGCAGCGATCGCTGAGGCTCTTCAAGTATATGCAGCGCCAGATATGGTGCAAGCCGAACGAGCACATTTACACCATCATGATCAGCTTGCTAGGCCGCGAAGGCCTACTCGATAAATGCTCCGAGGTGTTCGACGACATGCCAAGCCAAGGCGTGGTCCGTAGCGTATTCAGCTACACCGCTTTGATCAATGCCTATGGGCGCAACGGTCAGTATGAAACCTCCCTTCAATTTCTTGATAGAATGAAGAAAGATAAGGTTTCGCCGAGTATATTGACTTATAATACCGTTCTCAATGCCTGTGCTAGAGGTGGGTTGGAATGGGAAGGGTTATTAGGATTGTTTGCCGAAATGAGGCATGAAGGGATTCAACCTGACCTTGTTACTTATAATACTTTGCTTAGTGCTTGTGCTGGTAGAGGTTTAGGTGATGAGGCAGAGATGGTGTTCAGGACTATGAATGAGGGTGGGATTGTTCCGGATATAACCACTTATCGTTATCTTGTTGAAACTTTTGGTAAATTGGATAAGCTTGAGAAAGTATCAGAGCTGCTTAAAGAGATGGAATCTGGAGGGAATTTACCTGATATTACATCGTATAATGTGTTATTAGAGGCATATGCACAATTGGGGTCAATTAGAGAGTCAATGGGTGTGTTTAGGCAGATGCAAGCAGCAGGGTGTATGCCAAATGCGGCCACTTATAGTATTCTGTTGAATTTGTATGGGAGGCATGGACGGTATGATGATGTTCGGGAGCTTTTTCTTGAGATGAAAATTAGCAATACAGAGCCAGACCCGGCTACATATAACATTCTCATACAGGTGTTTGGGGAGGGTGGGTATTTTAAAGAGGTGGTGACTTTGTTTCACGATATGGTGGAGGAGAATATTGAGCCGAATATGGAGACGTATGAAGGGTTGATATATGCTTGTGGAAAGGGAGGACTCCATGAGGATGCCAAGAACATTTTACTTCACATGAGCGAGAAAGGAATAGTGCCTAGTTCGAAGGCTTATACAGGGGTTATTGAAGCATATGGGCAAGCGGCATTGTATGACGAAGCTCTTGTTGCCTTCAACACAATGAATGAAGTGGGAAGCAAACCATCAGTTGAAAGCTACAACTCGCTGATATATGCATTTGCAAGAGGCGGCCTATACAGGGAGACTGAAGCAGTTTTGTCAATAATGGGCGAGGTGGGTGCTGCCAGGAATGTCCATACATTCAATGGTATGATTGAAGCTTTTAGACAAGGAGGTCAGTTTGAGGAAGCTATAAAGGCATACGTTGAGATGGAAAAGAGAAGATGTGATCATGATGAATGGACCCTTGAGGCAGTTTTAAGTGTTTACTGCGTTGCAGGTCTTGTTAATGAGTGTGAGGAGCACTTCCAAGAGATGAAAGCCTCGGGAATATTGCCCAGTGTCATGTGCTACTGCATGATGCTTGCTGTTTATGCAAGGAATGACAGGTGGGATGATGCCAATGAGTTGCTAAATGAGATGCTCACAAATAGGGCATCAAATATTCATCAAGTAATTGGGCAGATGATAAAGGGAGATTATGATGATGACTCTAACTGGCAGATGGTAGAGTATGTTTTTGACAAATTAAAATCTGAAGGATGCGGGTTGGGAATGAGGTTCTACAACACACTACTAGAAGCACTTTGGTGGCTGGGCCAGAAACAAAGAGCTGTCCGGGTTCTTAATGAAGCGACACAGCGGGGGCTTTTTCCTGAACTTTTTCGTAAAAATAAACTCGTGGGGTCTGTTGATGTGCACAGGATGTGGCAAGGCGGTGCATATGCAGCAATGTCAGTTTGGCTAAACAATATGTATGAGATGTTCCTGAATGGAGAGGATCTTCCCAATATTGCAACTGTTGTTGTAGTACGAGGAAAGATGGAGAAAAGCTCAATGACACAAGATTTGCCGATTGCAAAGGCTGCTTATTCATTTCTGGAGGATAATATGCCATCATCCTTTTCCTTCCCAAAATGGAACAAGGGTCGAATTCTCTGCCAGCGCCCTCAGCTCAAACGGATTCTATCAAGCATCGAACCATCAACAGATGGGTCGGAAAGGAAAAAAATAATTACATTAAGTAACTCCCTGTTTCCTCCTCTGGGAACAAAAACATCCTCCAAAGATGTCAATAGTGGACGTTTTACTTGTCGCCATTTCAGTACAAGAATGGGAATACGTCAGGACCAATTCATAGTTCAATTTCCTAGAGTTTTAATATGGTGGAGAATGATTTTTCGGGTCCTCACCAACCAAAGTATTAGCTTGCAAAGAAGGCGGCATCGACCAAACCGCGAATGCTCGGTTCCACGCTCTTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

915

Amino Acids

103.46

Weight (kDa)

7.52

Isoelectric Point (pI)

41.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009497)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74850
fragaria_vesca	FvH4_5g16180 FvH4_5g16180
malus_domestica	MD06G1183200.v1.1 MD14G1189200.v1.1
prunus_persica	Prupe.5G181900_v2.0.a1 Prupe.5G181900_v2.0.a1
pyrus_communis	pycom06g16220 pycom14g15690
rosa_chinensis	RchiOBHm_Chr7g0179951
rosa_laevigata	RLG00000005307
rosa_multiflora	Rmu_co7983378.1_g000001 Rmu_sc0024809.1_g000001 Rmu_sc0024810.1_g000001 Rmu_sc0031626.1_g000001
rosa_roxburghii	Rroxscaffold_3G00273280
rosa_rugosa	Rorug06G0429400
rosa_samantha	Rh7AG029900 Rh7BG029100 Rh7CG030800 Rh7DG030100
rosa_wichuraiana	Rw7G002390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	675, 783
AasI	GACNNNNNNGTC	1 cut(s)	1653
AatII	GACGTC	1 cut(s)	261
Acc36I	ACCTGC	1 cut(s)	1748
AccB7I	CCANNNNNTGG	1 cut(s)	547
AccII	CGCG	5 cut(s)	380, 385, 387, 492, 2718
AccIII	TCCGGA	2 cut(s)	158, 871
AclWI	GGATC	2 cut(s)	210, 2268
AcoI	YGGCCR	2 cut(s)	139, 1089
AcsI	RAATTY	3 cut(s)	970, 1111, 2412
AcuI	CTGAAG	2 cut(s)	1587, 2037
AcyI	GRCGYC	1 cut(s)	258
AfaI	GTAC	4 cut(s)	120, 248, 2292, 2587
AfiI	CCNNNNNNNGG	9 cut(s)	123, 165, 172, 299, 542, 547, 747, 1558, 2525
AflII	CTTAAG	1 cut(s)	65
AjnI	CCWGG	1 cut(s)	1604
AjuI	GAANNNNNNNTTGG	2 cut(s)	2604, 2636
AleI	CACNNNNGTG	1 cut(s)	2068
Alw21I	GWGCWC	3 cut(s)	459, 1785, 2181
Alw26I	GTCTC	4 cut(s)	156, 323, 1295, 1556
Alw44I	GTGCAC	1 cut(s)	2177
AlwI	GGATC	2 cut(s)	210, 2268
Ama87I	CYCGRG	2 cut(s)	297, 1804
Aor13HI	TCCGGA	2 cut(s)	158, 871
AoxI	GGCC	6 cut(s)	139, 487, 496, 1089, 1549, 2077
ApaLI	GTGCAC	1 cut(s)	2177
ApeKI	GCWGC	9 cut(s)	285, 303, 397, 427, 943, 1067, 1601, 2207, 2345
ApoI	RAATTY	3 cut(s)	970, 1111, 2412
ArsI	GACNNNNNNTTYG	2 cut(s)	2311, 2343
AsiSI	GCGATCGC	1 cut(s)	404
Asp700I	GAANNNNTTC	2 cut(s)	759, 2142
AspLEI	GCGC	5 cut(s)	385, 387, 432, 597, 2427
AspS9I	GGNCC	5 cut(s)	550, 1722, 2077, 2608, 2665
AsuC2I	CCSGG	3 cut(s)	107, 1193, 2099
AsuHPI	GGTGA	4 cut(s)	238, 833, 1264, 2662
AsuII	TTCGAA	1 cut(s)	1403
AvaI	CYCGRG	2 cut(s)	297, 1804
AvaII	GGWCC	4 cut(s)	550, 1722, 2608, 2665
BaeGI	GKGCMC	1 cut(s)	2181
BarI	GAAGNNNNNNTAC	4 cut(s)	230, 236, 262, 268
BauI	CACGAG	1 cut(s)	2159
Bbv12I	GWGCWC	3 cut(s)	459, 1785, 2181
BbvCI	CCTCAGC	2 cut(s)	407, 2430
BbvI	GCAGC	9 cut(s)	297, 315, 409, 439, 930, 1079, 1588, 2219, 2332
BcgI	CGANNNNNNTGC	4 cut(s)	1580, 1614, 2400, 2434
BciT130I	CCWGG	1 cut(s)	1606
BclI	TGATCA	3 cut(s)	474, 579, 1708
BcnI	CCSGG	3 cut(s)	107, 1193, 2099
BcoDI	GTCTC	4 cut(s)	156, 323, 1295, 1556
BfaI	CTAG	7 cut(s)	186, 485, 699, 1398, 2057, 2631, 2743
BfoI	RGCGCY	2 cut(s)	433, 2428
BfrI	CTTAAG	1 cut(s)	65
BfuAI	ACCTGC	1 cut(s)	1748
BglI	GCCNNNNNGGC	1 cut(s)	495
BlpI	GCTNAGC	1 cut(s)	281
Bme1390I	CCNGG	4 cut(s)	107, 1193, 1606, 2099
Bme18I	GGWCC	4 cut(s)	550, 1722, 2608, 2665
BmeT110I	CYCGRG	2 cut(s)	297, 1804
BmgT120I	GGNCC	5 cut(s)	550, 1722, 2077, 2608, 2665
BmiI	GGNNCC	4 cut(s)	218, 1724, 2666, 2730
BmrFI	CCNGG	4 cut(s)	107, 1193, 1606, 2099
BmrI	ACTGGG	1 cut(s)	1812
BmsI	GCATC	9 cut(s)	1050, 1342, 1830, 1867, 1890, 1925, 2012, 2463, 2713
BmuI	ACTGGG	1 cut(s)	1812
BplI	GAGNNNNNCTC	2 cut(s)	2297, 2329
BpmI	CTGGAG	2 cut(s)	984, 2381
Bpu10I	CCTNAGC	2 cut(s)	407, 2430
Bpu1102I	GCTNAGC	1 cut(s)	281
Bpu14I	TTCGAA	1 cut(s)	1403
BpuEI	CTTGAG	3 cut(s)	947, 1181, 1748
BpuMI	CCSGG	3 cut(s)	107, 1193, 2099
BsaBI	GATNNNNATC	1 cut(s)	133
BsaHI	GRCGYC	1 cut(s)	258
BsaI	GGTCTC	1 cut(s)	156
BsaJI	CCNNGG	6 cut(s)	105, 211, 298, 516, 541, 1803
BsaWI	WCCGGW	3 cut(s)	123, 158, 871
BsaXI	ACNNNNNCTCC	2 cut(s)	1220, 1250
Bsc4I	CCNNNNNNNGG	9 cut(s)	123, 165, 172, 299, 542, 547, 747, 1558, 2525
Bse118I	RCCGGY	1 cut(s)	165
Bse1I	ACTGG	2 cut(s)	1818, 1982
Bse3DI	GCAATG	1 cut(s)	2217
Bse8I	GATNNNNATC	1 cut(s)	133
BseAI	TCCGGA	2 cut(s)	158, 871
BseBI	CCWGG	1 cut(s)	1606
BseDI	CCNNGG	6 cut(s)	105, 211, 298, 516, 541, 1803
BseGI	GGATG	8 cut(s)	113, 207, 1357, 1879, 2027, 2190, 2378, 2537
BseJI	GATNNNNATC	1 cut(s)	133
BseLI	CCNNNNNNNGG	9 cut(s)	123, 165, 172, 299, 542, 547, 747, 1558, 2525
BseMI	GCAATG	1 cut(s)	2217
BseMII	CTCAG	4 cut(s)	102, 295, 398, 2444
BseNI	ACTGG	2 cut(s)	1818, 1982
BsePI	GCGCGC	1 cut(s)	383
BseRI	GAGGAG	3 cut(s)	1292, 1793, 2511
BseSI	GKGCMC	1 cut(s)	2181
BseXI	GCAGC	9 cut(s)	297, 315, 409, 439, 930, 1079, 1588, 2219, 2332
BseYI	CCCAGC	2 cut(s)	13, 2074
Bsh1236I	CGCG	5 cut(s)	380, 385, 387, 492, 2718
Bsh1285I	CGRYCG	1 cut(s)	404
BshFI	GGCC	6 cut(s)	141, 489, 498, 1091, 1551, 2079
BsiEI	CGRYCG	1 cut(s)	404
BsiHKAI	GWGCWC	3 cut(s)	459, 1785, 2181
BsiHKCI	CYCGRG	2 cut(s)	297, 1804
BsiSI	CCGG	8 cut(s)	107, 124, 138, 159, 166, 872, 1193, 2098
BslFI	GGGAC	1 cut(s)	61
BslI	CCNNNNNNNGG	9 cut(s)	123, 165, 172, 299, 542, 547, 747, 1558, 2525
BsmAI	GTCTC	4 cut(s)	156, 323, 1295, 1556
BsmBI	CGTCTC	1 cut(s)	1295
BsmFI	GGGAC	1 cut(s)	61
BsmI	GAATGC	1 cut(s)	2726
BsnI	GGCC	6 cut(s)	141, 489, 498, 1091, 1551, 2079
Bso31I	GGTCTC	1 cut(s)	156
BsoBI	CYCGRG	2 cut(s)	297, 1804
Bsp119I	TTCGAA	1 cut(s)	1403
Bsp1286I	GDGCHC	3 cut(s)	459, 1785, 2181
Bsp13I	TCCGGA	2 cut(s)	158, 871
Bsp143I	GATC	6 cut(s)	202, 401, 474, 579, 1708, 2260
Bsp1720I	GCTNAGC	1 cut(s)	281
BspANI	GGCC	6 cut(s)	141, 489, 498, 1091, 1551, 2079
BspCNI	CTCAG	4 cut(s)	101, 294, 399, 2443
BspEI	TCCGGA	2 cut(s)	158, 871
BspFNI	CGCG	5 cut(s)	380, 385, 387, 492, 2718
BspHI	TCATGA	2 cut(s)	471, 1711
BspLI	GGNNCC	4 cut(s)	218, 1724, 2666, 2730
BspMI	ACCTGC	1 cut(s)	1748
BspPI	GGATC	2 cut(s)	210, 2268
BspQI	GCTCTTC	2 cut(s)	40, 419
BspT104I	TTCGAA	1 cut(s)	1403
BspTI	CTTAAG	1 cut(s)	65
BspTNI	GGTCTC	1 cut(s)	156
BsrDI	GCAATG	1 cut(s)	2217
BsrFI	RCCGGY	1 cut(s)	165
BsrI	ACTGG	2 cut(s)	1818, 1982
BssAI	RCCGGY	1 cut(s)	165
BssECI	CCNNGG	6 cut(s)	105, 211, 298, 516, 541, 1803
BssHII	GCGCGC	1 cut(s)	383
BssMI	GATC	6 cut(s)	202, 401, 474, 579, 1708, 2260
BssNI	GRCGYC	1 cut(s)	258
BssSI	CACGAG	1 cut(s)	2159
BssT1I	CCWWGG	2 cut(s)	211, 541
Bst2BI	CACGAG	1 cut(s)	2159
Bst2UI	CCWGG	1 cut(s)	1606
Bst4CI	ACNGT	7 cut(s)	146, 232, 342, 602, 682, 1134, 2281
Bst6I	CTCTTC	2 cut(s)	40, 419
BstACI	GRCGYC	1 cut(s)	258
BstAFI	CTTAAG	1 cut(s)	65
BstAPI	GCANNNNNTGC	1 cut(s)	2345
BstBI	TTCGAA	1 cut(s)	1403
BstC8I	GCNNGC	8 cut(s)	385, 446, 482, 1065, 1440, 1845, 2423, 2690
BstDEI	CTNAG	6 cut(s)	72, 88, 281, 407, 794, 2430
BstENI	CCTNNNNNAGG	1 cut(s)	297
BstF5I	GGATG	8 cut(s)	113, 207, 1357, 1879, 2027, 2190, 2378, 2537
BstFNI	CGCG	5 cut(s)	380, 385, 387, 492, 2718
BstH2I	RGCGCY	2 cut(s)	433, 2428
BstHHI	GCGC	5 cut(s)	385, 387, 432, 597, 2427
BstKTI	GATC	6 cut(s)	205, 404, 477, 582, 1711, 2263
BstMAI	GTCTC	4 cut(s)	156, 323, 1295, 1556
BstMBI	GATC	6 cut(s)	202, 401, 474, 579, 1708, 2260
BstMCI	CGRYCG	1 cut(s)	404
BstNI	CCWGG	1 cut(s)	1606
BstNSI	RCATGY	1 cut(s)	535
BstSCI	CCNGG	4 cut(s)	105, 1191, 1604, 2097
BstSLI	GKGCMC	1 cut(s)	2181
BstUI	CGCG	5 cut(s)	380, 385, 387, 492, 2718
BstV1I	GCAGC	9 cut(s)	297, 315, 409, 439, 930, 1079, 1588, 2219, 2332
BstX2I	RGATCY	2 cut(s)	202, 2260
BstYI	RGATCY	2 cut(s)	202, 2260
BsuRI	GGCC	6 cut(s)	141, 489, 498, 1091, 1551, 2079
BtsCI	GGATG	8 cut(s)	113, 207, 1357, 1879, 2027, 2190, 2378, 2537
BtsIMutI	CAGTG	1 cut(s)	1825
BveI	ACCTGC	1 cut(s)	1748
Cac8I	GCNNGC	8 cut(s)	385, 446, 482, 1065, 1440, 1845, 2423, 2690
CciI	TCATGA	2 cut(s)	471, 1711
CfoI	GCGC	5 cut(s)	385, 387, 432, 597, 2427
Cfr10I	RCCGGY	1 cut(s)	165
Cfr13I	GGNCC	5 cut(s)	550, 1722, 2077, 2608, 2665
Csp6I	GTAC	4 cut(s)	119, 247, 2291, 2586
CviAII	CATG	9 cut(s)	472, 532, 752, 1127, 1346, 1375, 1712, 1825, 1837
CviQI	GTAC	4 cut(s)	119, 247, 2291, 2586
DdeI	CTNAG	6 cut(s)	72, 88, 281, 407, 794, 2430
DpnI	GATC	6 cut(s)	204, 403, 476, 581, 1710, 2262
DpnII	GATC	6 cut(s)	202, 401, 474, 579, 1708, 2260
DraI	TTTAAA	1 cut(s)	1243
DrdI	GACNNNNNNGTC	1 cut(s)	1653
DseDI	GACNNNNNNGTC	1 cut(s)	1653
EaeI	YGGCCR	2 cut(s)	139, 1089
Eam1104I	CTCTTC	2 cut(s)	40, 419
EarI	CTCTTC	2 cut(s)	40, 419
Eco130I	CCWWGG	2 cut(s)	211, 541
Eco147I	AGGCCT	1 cut(s)	498
Eco31I	GGTCTC	1 cut(s)	156
Eco47I	GGWCC	4 cut(s)	550, 1722, 2608, 2665
Eco57I	CTGAAG	2 cut(s)	1587, 2037
Eco88I	CYCGRG	2 cut(s)	297, 1804
EcoNI	CCTNNNNNAGG	1 cut(s)	297
EcoO109I	RGGNCCY	1 cut(s)	2665
EcoRI	GAATTC	1 cut(s)	2412
EcoRII	CCWGG	1 cut(s)	1604
EcoT14I	CCWWGG	2 cut(s)	211, 541
EcoT22I	ATGCAT	1 cut(s)	1537
ErhI	CCWWGG	2 cut(s)	211, 541
Esp3I	CGTCTC	1 cut(s)	1295
FaeI	CATG	9 cut(s)	475, 535, 755, 1130, 1349, 1378, 1715, 1828, 1840
FaqI	GGGAC	1 cut(s)	61
FatI	CATG	9 cut(s)	471, 531, 751, 1126, 1345, 1374, 1711, 1824, 1836
FauI	CCCGC	3 cut(s)	55, 2018, 2115
FauNDI	CATATG	3 cut(s)	1012, 1432, 2203
FbaI	TGATCA	3 cut(s)	474, 579, 1708
FokI	GGATG	8 cut(s)	100, 194, 1364, 1886, 2034, 2197, 2365, 2524
FspBI	CTAG	7 cut(s)	186, 485, 699, 1398, 2057, 2631, 2743
GlaI	GCGC	5 cut(s)	384, 386, 431, 596, 2426
GsaI	CCCAGC	2 cut(s)	17, 2078
GsuI	CTGGAG	2 cut(s)	984, 2381
HaeII	RGCGCY	2 cut(s)	433, 2428
HaeIII	GGCC	6 cut(s)	141, 489, 498, 1091, 1551, 2079
HapII	CCGG	8 cut(s)	107, 124, 138, 159, 166, 872, 1193, 2098
HhaI	GCGC	5 cut(s)	385, 387, 432, 597, 2427
Hin1I	GRCGYC	1 cut(s)	258
Hin1II	CATG	9 cut(s)	475, 535, 755, 1130, 1349, 1378, 1715, 1828, 1840
Hin6I	GCGC	5 cut(s)	383, 385, 430, 595, 2425
HinP1I	GCGC	5 cut(s)	383, 385, 430, 595, 2425
HindIII	AAGCTT	2 cut(s)	923, 1638
HinfI	GANTC	8 cut(s)	110, 129, 760, 959, 1037, 1341, 1970, 2443
HpaII	CCGG	8 cut(s)	107, 124, 138, 159, 166, 872, 1193, 2098
HphI	GGTGA	4 cut(s)	238, 833, 1264, 2662
Hpy166II	GTNNAC	4 cut(s)	121, 1747, 2179, 2561
Hpy188I	TCNGA	4 cut(s)	517, 940, 2017, 2479
Hpy8I	GTNNAC	4 cut(s)	121, 1747, 2179, 2561
Hpy99I	CGWCG	4 cut(s)	226, 260, 263, 530
HpyCH4III	ACNGT	7 cut(s)	146, 232, 342, 602, 682, 1134, 2281
HpyCH4IV	ACGT	5 cut(s)	258, 1304, 1683, 2563, 2602
HpyF3I	CTNAG	6 cut(s)	72, 88, 281, 407, 794, 2430
HpySE526I	ACGT	5 cut(s)	258, 1304, 1683, 2563, 2602
Hsp92I	GRCGYC	1 cut(s)	258
Hsp92II	CATG	9 cut(s)	475, 535, 755, 1130, 1349, 1378, 1715, 1828, 1840
HspAI	GCGC	5 cut(s)	383, 385, 430, 595, 2425
Kpn2I	TCCGGA	2 cut(s)	158, 871
Ksp22I	TGATCA	3 cut(s)	474, 579, 1708
Kzo9I	GATC	6 cut(s)	202, 401, 474, 579, 1708, 2260
LguI	GCTCTTC	2 cut(s)	40, 419
LmnI	GCTCC	3 cut(s)	518, 1150, 1780
Lsp1109I	GCAGC	9 cut(s)	297, 315, 409, 439, 930, 1079, 1588, 2219, 2332
LweI	GCATC	9 cut(s)	1050, 1342, 1830, 1867, 1890, 1925, 2012, 2463, 2713
MaeI	CTAG	7 cut(s)	186, 485, 699, 1398, 2057, 2631, 2743
MaeII	ACGT	5 cut(s)	258, 1304, 1683, 2563, 2602
MaeIII	GTNAC	5 cut(s)	94, 226, 775, 1252, 2504
MalI	GATC	6 cut(s)	204, 403, 476, 581, 1710, 2262
MboI	GATC	6 cut(s)	202, 401, 474, 579, 1708, 2260
MboII	GAAGA	6 cut(s)	27, 319, 406, 652, 1713, 2255
MfeI	CAATTG	1 cut(s)	1019
MflI	RGATCY	2 cut(s)	202, 2260
MhlI	GDGCHC	3 cut(s)	459, 1785, 2181
MlyI	GAGTC	4 cut(s)	104, 1046, 1335, 1964
MmeI	TCCRAC	3 cut(s)	84, 690, 2457
Mph1103I	ATGCAT	1 cut(s)	1537
MroI	TCCGGA	2 cut(s)	158, 871
MroXI	GAANNNNTTC	2 cut(s)	759, 2142
MseI	TTAA	9 cut(s)	66, 948, 1242, 1739, 1767, 2009, 2106, 2501, 2639
MslI	CAYNNNNRTG	4 cut(s)	470, 1217, 1350, 2068
MspA1I	CMGCKG	1 cut(s)	2122
MspCI	CTTAAG	1 cut(s)	65
MspI	CCGG	8 cut(s)	107, 124, 138, 159, 166, 872, 1193, 2098
MspR9I	CCNGG	4 cut(s)	107, 1193, 1606, 2099
MunI	CAATTG	1 cut(s)	1019
Mva1269I	GAATGC	1 cut(s)	2726
MvaI	CCWGG	1 cut(s)	1606
MvnI	CGCG	5 cut(s)	380, 385, 387, 492, 2718
NciI	CCSGG	3 cut(s)	107, 1193, 2099
NdeI	CATATG	3 cut(s)	1012, 1432, 2203
NdeII	GATC	6 cut(s)	202, 401, 474, 579, 1708, 2260
NlaIII	CATG	9 cut(s)	475, 535, 755, 1130, 1349, 1378, 1715, 1828, 1840
NlaIV	GGNNCC	4 cut(s)	218, 1724, 2666, 2730
NmeAIII	GCCGAG	2 cut(s)	161, 684
NmuCI	GTSAC	3 cut(s)	94, 226, 1252
NsiI	ATGCAT	1 cut(s)	1537
NspI	RCATGY	1 cut(s)	535
NspV	TTCGAA	1 cut(s)	1403
OliI	CACNNNNGTG	1 cut(s)	2068
PagI	TCATGA	2 cut(s)	471, 1711
PauI	GCGCGC	1 cut(s)	383
PceI	AGGCCT	1 cut(s)	498
PciSI	GCTCTTC	2 cut(s)	40, 419
PcsI	WCGNNNNNNNCGW	1 cut(s)	188
PctI	GAATGC	1 cut(s)	2726
PdmI	GAANNNNTTC	2 cut(s)	759, 2142
PfeI	GAWTC	4 cut(s)	129, 760, 959, 2443
PflMI	CCANNNNNTGG	1 cut(s)	547
Ple19I	CGATCG	1 cut(s)	404
PleI	GAGTC	4 cut(s)	104, 1045, 1335, 1964
PpsI	GAGTC	4 cut(s)	104, 1045, 1335, 1964
PpuMI	RGGWCCY	1 cut(s)	2665
PsiI	TTATAA	2 cut(s)	675, 783
Psp5II	RGGWCCY	1 cut(s)	2665
Psp6I	CCWGG	1 cut(s)	1604
PspFI	CCCAGC	2 cut(s)	13, 2074
PspGI	CCWGG	1 cut(s)	1604
PspN4I	GGNNCC	4 cut(s)	218, 1724, 2666, 2730
PspPI	GGNCC	5 cut(s)	550, 1722, 2077, 2608, 2665
PspPPI	RGGWCCY	1 cut(s)	2665
PsrI	GAACNNNNNNTAC	2 cut(s)	2228, 2260
PsuI	RGATCY	2 cut(s)	202, 2260
PteI	GCGCGC	1 cut(s)	383
PvuI	CGATCG	1 cut(s)	404
RgaI	GCGATCGC	1 cut(s)	404
RsaI	GTAC	4 cut(s)	120, 248, 2292, 2587
RsaNI	GTAC	4 cut(s)	119, 247, 2291, 2586
RseI	CAYNNNNRTG	4 cut(s)	470, 1217, 1350, 2068
SapI	GCTCTTC	2 cut(s)	40, 419
SaqAI	TTAA	9 cut(s)	66, 948, 1242, 1739, 1767, 2009, 2106, 2501, 2639
Sau3AI	GATC	6 cut(s)	202, 401, 474, 579, 1708, 2260
Sau96I	GGNCC	5 cut(s)	550, 1722, 2077, 2608, 2665
SchI	GAGTC	4 cut(s)	104, 1046, 1335, 1964
ScrFI	CCNGG	4 cut(s)	107, 1193, 1606, 2099
SduI	GDGCHC	3 cut(s)	459, 1785, 2181
SfaAI	GCGATCGC	1 cut(s)	404
SfaNI	GCATC	9 cut(s)	1050, 1342, 1830, 1867, 1890, 1925, 2012, 2463, 2713
SfiI	GGCCNNNNNGGCC	1 cut(s)	495
SfuI	TTCGAA	1 cut(s)	1403
SgfI	GCGATCGC	1 cut(s)	404
SinI	GGWCC	4 cut(s)	550, 1722, 2608, 2665
SmiMI	CAYNNNNRTG	4 cut(s)	470, 1217, 1350, 2068
SmlI	CTYRAG	4 cut(s)	65, 926, 1160, 1727
SmoI	CTYRAG	4 cut(s)	65, 926, 1160, 1727
SseBI	AGGCCT	1 cut(s)	498
SspI	AATATT	4 cut(s)	1285, 1812, 1924, 2272
SspMI	CTAG	7 cut(s)	186, 485, 699, 1398, 2057, 2631, 2743
StuI	AGGCCT	1 cut(s)	498
StyD4I	CCNGG	4 cut(s)	105, 1191, 1604, 2097
StyI	CCWWGG	2 cut(s)	211, 541
TaaI	ACNGT	7 cut(s)	146, 232, 342, 602, 682, 1134, 2281
TaiI	ACGT	5 cut(s)	261, 1307, 1686, 2566, 2605
TaqI	TCGA	9 cut(s)	234, 261, 321, 504, 525, 1403, 2410, 2457, 2707
TatI	WGTACW	2 cut(s)	246, 2585
TauI	GCSGC	7 cut(s)	383, 390, 492, 1091, 1445, 1551, 2704
TfiI	GAWTC	4 cut(s)	129, 760, 959, 2443
Tru1I	TTAA	9 cut(s)	66, 948, 1242, 1739, 1767, 2009, 2106, 2501, 2639
Tru9I	TTAA	9 cut(s)	66, 948, 1242, 1739, 1767, 2009, 2106, 2501, 2639
TscAI	CASTG	1 cut(s)	1825
TseFI	GTSAC	3 cut(s)	94, 226, 1252
TseI	GCWGC	9 cut(s)	285, 303, 397, 427, 943, 1067, 1601, 2207, 2345
Tsp45I	GTSAC	3 cut(s)	94, 226, 1252
TspGWI	ACGGA	3 cut(s)	106, 542, 2455
TspRI	CASTG	1 cut(s)	1825
Van91I	CCANNNNNTGG	1 cut(s)	547
Vha464I	CTTAAG	1 cut(s)	65
VneI	GTGCAC	1 cut(s)	2177
VpaK11BI	GGWCC	4 cut(s)	550, 1722, 2608, 2665
XagI	CCTNNNNNAGG	1 cut(s)	297
XapI	RAATTY	3 cut(s)	970, 1111, 2412
XceI	RCATGY	1 cut(s)	535
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1622
XmnI	GAANNNNTTC	2 cut(s)	759, 2142
XspI	CTAG	7 cut(s)	186, 485, 699, 1398, 2057, 2631, 2743
ZraI	GACGTC	1 cut(s)	259
Zsp2I	ATGCAT	1 cut(s)	1537

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.