Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0009497

Physical Location & Seq

Genomic Coordinates Forward (+)

18233253 .. 18237403

Gene Structure 4151 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g15690.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2748 bp

ATGCGTGGTGCGACAGTTGGGTTGGGTGGCGGCGATTGCGGGCCTGCTTACTTACTTACTGTGGGCGCGGTTCGGAGAAAATCCAATCCGAAGCTCCGAGAGGCTCATGCGAGCCTACTTACCGAAATGTCCTTCTCCCCCACGCTCTCCATTTCCAGCTCTTCGCCTCTCTCCACCTCAATTTCCAAAATTAACCCCAAGTCCCACCACCTCACCGTTCTCACCAACTCATCAACCCACCGGAGATTCCTCTCCGGCCGCACGACCTTCCTCTCCGGCGACCGCCGGCTGGAGTTCTTGTCCAGGGCGAAGCCGAAGGACCTCATCCTCGGGAACCCGTCGGTGACGGTGGAGAAGGGGAAGTACAGCTACGACGTCGAAACCCTAATCAACAAGCTCAGCAGCCTCCCTCCGCGCGGCAGCATCGCTCGGTGCCTCGACATCTTCAAGAACAAGCTGTCACTAAACGACTTCGCTTTGGTGTTCAAGGAGTTCGCGGCGCGCGGCGATTGGCAGCGGTCGCTTCGCCTCTTCAAGTATATGCAGCGCCAGATATGGTGCAAGCCGAACGAGCACATATACACGATAATGATCAGCTTGCTCGGCCGTGAGGGGCTGCTGGATAAGTGCGCCGAGGTGTTCGACGAAATGCCTAGCCAGGGCGTGGTCCGCAGCGTCTTCAGCTACACCGCATTGATCAATGCCTACGGGCGTAACGGTCAGTATGAAACATCCCTTGAATTTCTTGATCGAATGAAGAAAGATAAGGTTCCGCCGAGTATTTTGACTTACAATACTGTGCTCAATGCCTGTGCTAGAGGTGGGCTGGATTGGGAAGGGTTATTAGGATTGTTTGCCGAAATGCGGCACGAAGGAATACAGCCTGACCTTGTTACTTATAATACTTTGCTTAGTGCTTGTGCTGGTAGAGGGTTAGGCGATGAGGCAGAGATGGTGTTCAGGACTATGAATGAGGGTGGGATTGTTCCAGATATGACCACGTATCGTTACCTTGTTGAAACTTTTGGTAAATTGGACAAGCTCGAGAAAGTCTCGGAGCTTCTTAAAGAGATGGAAGCTGGAGGGAATTTGCCTGATATTACGTCGTATAATGTGTTACTGGAGGCATATGCTGAATTGGGATCGATTAGAGAGTCAATGGGTGTGTTTAGGCAGATGCAGGCTGCGGGGTGTATGCCGAATGCTGCTACTTATAGTATTTTGCTGAATTTGTATGGGAGGCATGGAAGGTATGATGATGTTCGAGAGCTTTTTCTTGAGATGAAAGTGAGCAATACGGAGCCAGATGCAGCTACATATAACATTCTTATACAGGTGTTTGGGGAGGGTGGGTATTTTAAGGAAGTAGTGACTTTGTTTCATGATATGGTGGAGGAGAAAATCGAGCCGAATATGGAGACGTATGAAGGGTTGATATATGCTTGTGGAAAGGGAGGACTCCATGAGGATTCCAAGAAAATTTTACATCACATGCACGAGAATGGAATAGTGCCTAGTACCAAGGCTTATACAGGGGTTATTGAAGCATATGGGCAAGCAGCATTGTATGACGAAGCTCTTGTTGCCTTCAACACAATGAATGAAGTGGGAAGCAAACCATCCGTTGAAAGCTACAACTCACTGATATATGCATTTGCAAGAGGCGGACTATACAGGGAGACTGAAGCAGTCTTGTTAATAATGGGCAAGGCTGGTGTTGCCCGGAATGTCCATACAGTCAATGGCATGATAGAAGCTTTTAGGCAAGGAGGTCAATTTGAAGAAGCTATCAAGGCATACGTTGAGATGGAAAAGACAAGATGCGATCCCGATGAGTGGACCCTTGAGGCAGTTTTAAGCGTTTACTGCGTTGCAGGTCTTGTTAATGAGTGTGAGGAGCACTTCCAAGAGATTAAAGCCTCAGGAATATTACCCAGTGTCATGTGCTACTGCATGATGCTTGCTGTTTATGCAAGGAGTGACAGGTGGCATGATGCCAATGTGTTGCTGAATGAGATGCTTACAAACAGGGCATCGAATATTCATCAAGTGATTGGGCAGATGATCAAGGGAGATTATGATGATGACTCTAACTGGCAGATGGTAGAGTATGTTTTTGACAAATTAAAATCCGAAGGATGCGGCTTGGGAATGAGGTTCTACAACACGCTACTAGAAGCACTTTGGTGGTTGGGTCAGAAACAAAGAGCTGCGCGAGTTCTTAATGAAGCAACACAGCGGGGGCTTTTTCCTGAACTTTTTCGTAAAAATAAACTTGTGGTGTCTGTTGATGTGCACAGAATGTGGCAAGGCGGTGCATATACAGCAATGTCAGTTTGGCTAAACAATATGTATGAGATGTTCCTCAATGGCGAGGATCTACCCCATCTTGCAACTGTTGTTGTAGTACGAGGGAAGATGGAGAAAAGCTCAATAACACAAGATCTACCGATCGCAAAGGCTGCTTATACATTTCTGCAGGATAATATGCCAGCTTCCTTTTCTTTCCCAAAATGGAACAATGGTCGAATTCTCTGTCAGCGCCCTCAGCTCAAGCGGATCCTATCAAGCATCGAACCATCCACAGATGAGTCCGAAAGGAATAATATTATCACGTTAAGTAACTCCCCGTTTCCTCCTCCTGGAACAAAGACATCCTCCAGTGCTGTCAATAGCGGACGGTATAATGATGCCGGTTCTGATGAAAGAATTAGGACAAGAACGGAGGTTTTGACAAGCATGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

916

Amino Acids

102.48

Weight (kDa)

6.13

Isoelectric Point (pI)

37.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009497)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74850
fragaria_vesca	FvH4_5g16180 FvH4_5g16180
malus_domestica	MD06G1183200.v1.1 MD14G1189200.v1.1
prunus_persica	Prupe.5G181900_v2.0.a1 Prupe.5G181900_v2.0.a1
pyrus_communis	pycom06g16220 pycom14g15690
rosa_chinensis	RchiOBHm_Chr7g0179951
rosa_laevigata	RLG00000005307
rosa_multiflora	Rmu_co7983378.1_g000001 Rmu_sc0024809.1_g000001 Rmu_sc0024810.1_g000001 Rmu_sc0031626.1_g000001
rosa_roxburghii	Rroxscaffold_3G00273280
rosa_rugosa	Rorug06G0429400
rosa_samantha	Rh7AG029900 Rh7BG029100 Rh7CG030800 Rh7DG030100
rosa_wichuraiana	Rw7G002390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	900
AatII	GACGTC	1 cut(s)	378
Acc36I	ACCTGC	1 cut(s)	1865
AccB1I	GGYRCC	1 cut(s)	432
AccB7I	CCANNNNNTGG	1 cut(s)	664
AccII	CGCG	7 cut(s)	68, 415, 417, 497, 502, 504, 2215
AclWI	GGATC	5 cut(s)	1150, 1820, 2385, 2554, 2567
AcoI	YGGCCR	2 cut(s)	256, 604
AcsI	RAATTY	5 cut(s)	740, 1087, 1228, 1479, 2529
AcuI	CTGAAG	2 cut(s)	664, 1704
AcyI	GRCGYC	1 cut(s)	375
AfaI	GTAC	3 cut(s)	365, 1519, 2409
AfiI	CCNNNNNNNGG	7 cut(s)	289, 416, 659, 664, 864, 1836, 2642
AgsI	TTSAA	9 cut(s)	448, 487, 535, 740, 1019, 1544, 1591, 1628, 1781
AjnI	CCWGG	3 cut(s)	302, 657, 2641
AleI	CACNNNNGTG	1 cut(s)	2185
Alw21I	GWGCWC	4 cut(s)	576, 804, 1902, 2298
Alw26I	GTCTC	3 cut(s)	1057, 1412, 1673
Alw44I	GTGCAC	1 cut(s)	2294
AlwI	GGATC	5 cut(s)	1150, 1820, 2385, 2554, 2567
Ama87I	CYCGRG	2 cut(s)	329, 1043
AoxI	GGCC	3 cut(s)	41, 256, 604
ApaLI	GTGCAC	1 cut(s)	2294
ApoI	RAATTY	5 cut(s)	740, 1087, 1228, 1479, 2529
ArsI	GACNNNNNNTTYG	2 cut(s)	2521, 2553
Asp700I	GAANNNNTTC	1 cut(s)	2259
AspLEI	GCGC	8 cut(s)	68, 417, 502, 504, 549, 632, 2215, 2544
AspS9I	GGNCC	4 cut(s)	41, 319, 667, 1839
AsuC2I	CCSGG	1 cut(s)	1723
AsuHPI	GGTGA	3 cut(s)	205, 214, 355
AvaI	CYCGRG	2 cut(s)	329, 1043
AvaII	GGWCC	3 cut(s)	319, 667, 1839
AxyI	CCTNAGG	1 cut(s)	1921
BaeGI	GKGCMC	1 cut(s)	2298
BamHI	GGATCC	1 cut(s)	2559
BanI	GGYRCC	1 cut(s)	432
BarI	GAAGNNNNNNTAC	4 cut(s)	347, 353, 379, 385
BauI	CACGAG	1 cut(s)	1496
BbsI	GAAGAC	1 cut(s)	670
Bbv12I	GWGCWC	4 cut(s)	576, 804, 1902, 2298
BbvCI	CCTCAGC	1 cut(s)	2547
BccI	CCATC	8 cut(s)	946, 1066, 1627, 1801, 2095, 2394, 2413, 2587
BceAI	ACGGC	1 cut(s)	591
BciT130I	CCWGG	3 cut(s)	304, 659, 2643
BclI	TGATCA	3 cut(s)	591, 696, 2064
BcnI	CCSGG	1 cut(s)	1723
BcoDI	GTCTC	3 cut(s)	1057, 1412, 1673
BfaI	CTAG	4 cut(s)	654, 816, 1515, 2174
BfmI	CTRYAG	1 cut(s)	2477
BfoI	RGCGCY	2 cut(s)	550, 2545
BfuAI	ACCTGC	1 cut(s)	1865
BglII	AGATCT	1 cut(s)	2443
BlpI	GCTNAGC	1 cut(s)	398
Bme1390I	CCNGG	4 cut(s)	304, 659, 1723, 2643
Bme18I	GGWCC	3 cut(s)	319, 667, 1839
BmeT110I	CYCGRG	2 cut(s)	329, 1043
BmgT120I	GGNCC	4 cut(s)	41, 319, 667, 1839
BmiI	GGNNCC	6 cut(s)	335, 434, 771, 1302, 1841, 2561
BmrFI	CCNGG	4 cut(s)	304, 659, 1723, 2643
BmrI	ACTGGG	1 cut(s)	1929
BmuI	ACTGGG	1 cut(s)	1929
BpiI	GAAGAC	1 cut(s)	670
BplI	GAGNNNNNCTC	4 cut(s)	1037, 1069, 2414, 2446
BpmI	CTGGAG	4 cut(s)	311, 1101, 1142, 2644
Bpu10I	CCTNAGC	1 cut(s)	2547
Bpu1102I	GCTNAGC	1 cut(s)	398
BpuEI	CTTGAG	3 cut(s)	1298, 1865, 2537
BpuMI	CCSGG	1 cut(s)	1723
Bsa29I	ATCGAT	1 cut(s)	1145
BsaAI	YACGTR	1 cut(s)	1002
BsaBI	GATNNNNATC	1 cut(s)	590
BsaHI	GRCGYC	1 cut(s)	375
BsaJI	CCNNGG	5 cut(s)	303, 328, 633, 658, 1521
BsaWI	WCCGGW	1 cut(s)	240
BsaXI	ACNNNNNCTCC	4 cut(s)	284, 314, 1337, 1367
Bsc4I	CCNNNNNNNGG	7 cut(s)	289, 416, 659, 664, 864, 1836, 2642
Bse118I	RCCGGY	2 cut(s)	285, 2693
Bse1I	ACTGG	4 cut(s)	1125, 1935, 2099, 2661
Bse21I	CCTNAGG	1 cut(s)	1921
Bse3DI	GCAATG	1 cut(s)	2334
Bse8I	GATNNNNATC	1 cut(s)	590
BseBI	CCWGG	3 cut(s)	304, 659, 2643
BseCI	ATCGAT	1 cut(s)	1145
BseDI	CCNNGG	5 cut(s)	303, 328, 633, 658, 1521
BseGI	GGATG	6 cut(s)	324, 731, 1619, 2144, 2579, 2654
BseJI	GATNNNNATC	1 cut(s)	590
BseLI	CCNNNNNNNGG	7 cut(s)	289, 416, 659, 664, 864, 1836, 2642
BseMI	GCAATG	1 cut(s)	2334
BseMII	CTCAG	3 cut(s)	412, 1935, 2561
BseNI	ACTGG	4 cut(s)	1125, 1935, 2099, 2661
BsePI	GCGCGC	1 cut(s)	500
BseRI	GAGGAG	3 cut(s)	1409, 1910, 2628
BseSI	GKGCMC	1 cut(s)	2298
BseX3I	CGGCCG	2 cut(s)	256, 604
Bsh1236I	CGCG	7 cut(s)	68, 415, 417, 497, 502, 504, 2215
Bsh1285I	CGRYCG	5 cut(s)	259, 283, 521, 607, 2454
BshFI	GGCC	3 cut(s)	43, 258, 606
BshNI	GGYRCC	1 cut(s)	432
BshVI	ATCGAT	1 cut(s)	1145
BsiEI	CGRYCG	5 cut(s)	259, 283, 521, 607, 2454
BsiHKAI	GWGCWC	4 cut(s)	576, 804, 1902, 2298
BsiHKCI	CYCGRG	2 cut(s)	329, 1043
BsiSI	CCGG	6 cut(s)	241, 255, 276, 286, 1723, 2694
BslFI	GGGAC	1 cut(s)	187
BslI	CCNNNNNNNGG	7 cut(s)	289, 416, 659, 664, 864, 1836, 2642
BsmAI	GTCTC	3 cut(s)	1057, 1412, 1673
BsmBI	CGTCTC	1 cut(s)	1412
BsmFI	GGGAC	1 cut(s)	187
BsmI	GAATGC	1 cut(s)	1207
BsnI	GGCC	3 cut(s)	43, 258, 606
BsoBI	CYCGRG	2 cut(s)	329, 1043
Bsp1286I	GDGCHC	4 cut(s)	576, 804, 1902, 2298
Bsp1720I	GCTNAGC	1 cut(s)	398
BspANI	GGCC	3 cut(s)	43, 258, 606
BspCNI	CTCAG	3 cut(s)	411, 1934, 2560
BspDI	ATCGAT	1 cut(s)	1145
BspFNI	CGCG	7 cut(s)	68, 415, 417, 497, 502, 504, 2215
BspHI	TCATGA	1 cut(s)	1381
BspLI	GGNNCC	6 cut(s)	335, 434, 771, 1302, 1841, 2561
BspMAI	CTGCAG	1 cut(s)	2481
BspMI	ACCTGC	1 cut(s)	1865
BspPI	GGATC	5 cut(s)	1150, 1820, 2385, 2554, 2567
BspQI	GCTCTTC	1 cut(s)	166
BspT107I	GGYRCC	1 cut(s)	432
BsrDI	GCAATG	1 cut(s)	2334
BsrFI	RCCGGY	2 cut(s)	285, 2693
BsrI	ACTGG	4 cut(s)	1125, 1935, 2099, 2661
BssAI	RCCGGY	2 cut(s)	285, 2693
BssECI	CCNNGG	5 cut(s)	303, 328, 633, 658, 1521
BssHII	GCGCGC	1 cut(s)	500
BssNI	GRCGYC	1 cut(s)	375
BssSI	CACGAG	1 cut(s)	1496
BssT1I	CCWWGG	1 cut(s)	1521
Bst2BI	CACGAG	1 cut(s)	1496
Bst2UI	CCWGG	3 cut(s)	304, 659, 2643
Bst4CI	ACNGT	9 cut(s)	16, 61, 217, 349, 719, 799, 1738, 2398, 2682
Bst6I	CTCTTC	2 cut(s)	166, 536
BstACI	GRCGYC	1 cut(s)	375
BstAPI	GCANNNNNTGC	1 cut(s)	2462
BstBAI	YACGTR	1 cut(s)	1002
BstDEI	CTNAG	4 cut(s)	398, 911, 1921, 2547
BstF5I	GGATG	6 cut(s)	324, 731, 1619, 2144, 2579, 2654
BstFNI	CGCG	7 cut(s)	68, 415, 417, 497, 502, 504, 2215
BstH2I	RGCGCY	2 cut(s)	550, 2545
BstHHI	GCGC	8 cut(s)	68, 417, 502, 504, 549, 632, 2215, 2544
BstMAI	GTCTC	3 cut(s)	1057, 1412, 1673
BstMCI	CGRYCG	5 cut(s)	259, 283, 521, 607, 2454
BstNI	CCWGG	3 cut(s)	304, 659, 2643
BstNSI	RCATGY	1 cut(s)	1495
BstSCI	CCNGG	4 cut(s)	302, 657, 1721, 2641
BstSFI	CTRYAG	1 cut(s)	2477
BstSLI	GKGCMC	1 cut(s)	2298
BstUI	CGCG	7 cut(s)	68, 415, 417, 497, 502, 504, 2215
BstV2I	GAAGAC	1 cut(s)	670
BstX2I	RGATCY	3 cut(s)	2377, 2443, 2559
BstYI	RGATCY	3 cut(s)	2377, 2443, 2559
BstZI	CGGCCG	2 cut(s)	256, 604
Bsu15I	ATCGAT	1 cut(s)	1145
Bsu36I	CCTNAGG	1 cut(s)	1921
BsuRI	GGCC	3 cut(s)	43, 258, 606
BsuTUI	ATCGAT	1 cut(s)	1145
BtgZI	GCGATG	2 cut(s)	409, 954
BtsCI	GGATG	6 cut(s)	324, 731, 1619, 2144, 2579, 2654
BtsIMutI	CAGTG	3 cut(s)	1640, 1942, 2668
BveI	ACCTGC	1 cut(s)	1865
CciI	TCATGA	1 cut(s)	1381
CfoI	GCGC	8 cut(s)	68, 417, 502, 504, 549, 632, 2215, 2544
Cfr10I	RCCGGY	2 cut(s)	285, 2693
Cfr13I	GGNCC	4 cut(s)	41, 319, 667, 1839
ClaI	ATCGAT	1 cut(s)	1145
CseI	GACGC	1 cut(s)	664
Csp6I	GTAC	3 cut(s)	364, 1518, 2408
CviQI	GTAC	3 cut(s)	364, 1518, 2408
DdeI	CTNAG	4 cut(s)	398, 911, 1921, 2547
EaeI	YGGCCR	2 cut(s)	256, 604
EagI	CGGCCG	2 cut(s)	256, 604
Eam1104I	CTCTTC	2 cut(s)	166, 536
EarI	CTCTTC	2 cut(s)	166, 536
EciI	GGCGGA	2 cut(s)	762, 1680
EclXI	CGGCCG	2 cut(s)	256, 604
Eco130I	CCWWGG	1 cut(s)	1521
Eco47I	GGWCC	3 cut(s)	319, 667, 1839
Eco52I	CGGCCG	2 cut(s)	256, 604
Eco57I	CTGAAG	2 cut(s)	664, 1704
Eco81I	CCTNAGG	1 cut(s)	1921
Eco88I	CYCGRG	2 cut(s)	329, 1043
EcoO109I	RGGNCCY	1 cut(s)	319
EcoRI	GAATTC	1 cut(s)	2529
EcoRII	CCWGG	3 cut(s)	302, 657, 2641
EcoT14I	CCWWGG	1 cut(s)	1521
EcoT22I	ATGCAT	1 cut(s)	1654
ErhI	CCWWGG	1 cut(s)	1521
Esp3I	CGTCTC	1 cut(s)	1412
FaqI	GGGAC	1 cut(s)	187
FauI	CCCGC	3 cut(s)	32, 1180, 2232
FauNDI	CATATG	2 cut(s)	1129, 1549
FbaI	TGATCA	3 cut(s)	591, 696, 2064
FokI	GGATG	6 cut(s)	311, 718, 1606, 2151, 2566, 2641
FspBI	CTAG	4 cut(s)	654, 816, 1515, 2174
GlaI	GCGC	8 cut(s)	67, 416, 501, 503, 548, 631, 2214, 2543
GsuI	CTGGAG	4 cut(s)	311, 1101, 1142, 2644
HaeII	RGCGCY	2 cut(s)	550, 2545
HaeIII	GGCC	3 cut(s)	43, 258, 606
HapII	CCGG	6 cut(s)	241, 255, 276, 286, 1723, 2694
HgaI	GACGC	1 cut(s)	664
HhaI	GCGC	8 cut(s)	68, 417, 502, 504, 549, 632, 2215, 2544
Hin1I	GRCGYC	1 cut(s)	375
Hin6I	GCGC	8 cut(s)	66, 415, 500, 502, 547, 630, 2213, 2542
HinP1I	GCGC	8 cut(s)	66, 415, 500, 502, 547, 630, 2213, 2542
HindIII	AAGCTT	1 cut(s)	1755
HinfI	GANTC	6 cut(s)	246, 1154, 1458, 1469, 2087, 2591
HpaII	CCGG	6 cut(s)	241, 255, 276, 286, 1723, 2694
HphI	GGTGA	3 cut(s)	205, 214, 355
Hpy166II	GTNNAC	3 cut(s)	1839, 1864, 2296
Hpy188I	TCNGA	8 cut(s)	75, 90, 98, 1057, 2134, 2199, 2596, 2701
Hpy8I	GTNNAC	3 cut(s)	1839, 1864, 2296
Hpy99I	CGWCG	5 cut(s)	343, 377, 380, 647, 1108
HpyCH4III	ACNGT	9 cut(s)	16, 61, 217, 349, 719, 799, 1738, 2398, 2682
HpyCH4IV	ACGT	6 cut(s)	375, 1001, 1103, 1421, 1800, 2615
HpyF3I	CTNAG	4 cut(s)	398, 911, 1921, 2547
HpySE526I	ACGT	6 cut(s)	375, 1001, 1103, 1421, 1800, 2615
Hsp92I	GRCGYC	1 cut(s)	375
HspAI	GCGC	8 cut(s)	66, 415, 500, 502, 547, 630, 2213, 2542
KroI	GCCGGC	1 cut(s)	285
KroNI	GCCGGC	1 cut(s)	287
Ksp22I	TGATCA	3 cut(s)	591, 696, 2064
LguI	GCTCTTC	1 cut(s)	166
LmnI	GCTCC	4 cut(s)	99, 1057, 1300, 1897
MaeI	CTAG	4 cut(s)	654, 816, 1515, 2174
MaeII	ACGT	6 cut(s)	375, 1001, 1103, 1421, 1800, 2615
MaeIII	GTNAC	9 cut(s)	343, 459, 713, 892, 1007, 1116, 1369, 1979, 2621
MboII	GAAGA	7 cut(s)	153, 436, 523, 670, 769, 1793, 2428
MflI	RGATCY	3 cut(s)	2377, 2443, 2559
MhlI	GDGCHC	4 cut(s)	576, 804, 1902, 2298
MlyI	GAGTC	4 cut(s)	1163, 1452, 2081, 2600
Mph1103I	ATGCAT	1 cut(s)	1654
MroNI	GCCGGC	1 cut(s)	285
MroXI	GAANNNNTTC	1 cut(s)	2259
MslI	CAYNNNNRTG	3 cut(s)	587, 1500, 2185
MspA1I	CMGCKG	2 cut(s)	517, 2239
MspI	CCGG	6 cut(s)	241, 255, 276, 286, 1723, 2694
MspR9I	CCNGG	4 cut(s)	304, 659, 1723, 2643
Mva1269I	GAATGC	1 cut(s)	1207
MvaI	CCWGG	3 cut(s)	304, 659, 2643
MvnI	CGCG	7 cut(s)	68, 415, 417, 497, 502, 504, 2215
NaeI	GCCGGC	1 cut(s)	287
NciI	CCSGG	1 cut(s)	1723
NdeI	CATATG	2 cut(s)	1129, 1549
NgoMIV	GCCGGC	1 cut(s)	285
NlaIV	GGNNCC	6 cut(s)	335, 434, 771, 1302, 1841, 2561
NmeAIII	GCCGAG	3 cut(s)	582, 658, 801
NmuCI	GTSAC	4 cut(s)	343, 459, 1369, 1979
NsiI	ATGCAT	1 cut(s)	1654
NspI	RCATGY	1 cut(s)	1495
OliI	CACNNNNGTG	1 cut(s)	2185
PaeR7I	CTCGAG	1 cut(s)	1043
PagI	TCATGA	1 cut(s)	1381
PauI	GCGCGC	1 cut(s)	500
PciSI	GCTCTTC	1 cut(s)	166
PctI	GAATGC	1 cut(s)	1207
PdiI	GCCGGC	1 cut(s)	287
PdmI	GAANNNNTTC	1 cut(s)	2259
PfeI	GAWTC	2 cut(s)	246, 1469
PflMI	CCANNNNNTGG	1 cut(s)	664
PfoI	TCCNGGA	1 cut(s)	2641
Ple19I	CGATCG	1 cut(s)	2454
PleI	GAGTC	4 cut(s)	1162, 1452, 2081, 2599
PpsI	GAGTC	4 cut(s)	1162, 1452, 2081, 2599
Ppu21I	YACGTR	1 cut(s)	1002
PpuMI	RGGWCCY	1 cut(s)	319
PsiI	TTATAA	1 cut(s)	900
Psp5II	RGGWCCY	1 cut(s)	319
Psp6I	CCWGG	3 cut(s)	302, 657, 2641
PspGI	CCWGG	3 cut(s)	302, 657, 2641
PspN4I	GGNNCC	6 cut(s)	335, 434, 771, 1302, 1841, 2561
PspPI	GGNCC	4 cut(s)	41, 319, 667, 1839
PspPPI	RGGWCCY	1 cut(s)	319
PsrI	GAACNNNNNNTAC	2 cut(s)	2345, 2377
PstI	CTGCAG	1 cut(s)	2481
PsuI	RGATCY	3 cut(s)	2377, 2443, 2559
PteI	GCGCGC	1 cut(s)	500
PvuI	CGATCG	1 cut(s)	2454
RsaI	GTAC	3 cut(s)	365, 1519, 2409
RsaNI	GTAC	3 cut(s)	364, 1518, 2408
RseI	CAYNNNNRTG	3 cut(s)	587, 1500, 2185
SapI	GCTCTTC	1 cut(s)	166
Sau96I	GGNCC	4 cut(s)	41, 319, 667, 1839
SchI	GAGTC	4 cut(s)	1163, 1452, 2081, 2600
ScrFI	CCNGG	4 cut(s)	304, 659, 1723, 2643
SduI	GDGCHC	4 cut(s)	576, 804, 1902, 2298
SfcI	CTRYAG	1 cut(s)	2477
Sfr274I	CTCGAG	1 cut(s)	1043
SinI	GGWCC	3 cut(s)	319, 667, 1839
SlaI	CTCGAG	1 cut(s)	1043
SmiMI	CAYNNNNRTG	3 cut(s)	587, 1500, 2185
SmlI	CTYRAG	4 cut(s)	1043, 1277, 1844, 2552
SmoI	CTYRAG	4 cut(s)	1043, 1277, 1844, 2552
SspI	AATATT	3 cut(s)	1929, 2041, 2608
SspMI	CTAG	4 cut(s)	654, 816, 1515, 2174
StyD4I	CCNGG	4 cut(s)	302, 657, 1721, 2641
StyI	CCWWGG	1 cut(s)	1521
TaaI	ACNGT	9 cut(s)	16, 61, 217, 349, 719, 799, 1738, 2398, 2682
TaiI	ACGT	6 cut(s)	378, 1004, 1106, 1424, 1803, 2618
TatI	WGTACW	1 cut(s)	363
TauI	GCSGC	7 cut(s)	33, 261, 420, 500, 507, 868, 2145
TfiI	GAWTC	2 cut(s)	246, 1469
TscAI	CASTG	3 cut(s)	1647, 1942, 2668
TseFI	GTSAC	4 cut(s)	343, 459, 1369, 1979
Tsp45I	GTSAC	4 cut(s)	343, 459, 1369, 1979
TspGWI	ACGGA	3 cut(s)	1313, 1612, 2738
TspRI	CASTG	3 cut(s)	1647, 1942, 2668
Van91I	CCANNNNNTGG	1 cut(s)	664
VneI	GTGCAC	1 cut(s)	2294
VpaK11BI	GGWCC	3 cut(s)	319, 667, 1839
XapI	RAATTY	5 cut(s)	740, 1087, 1228, 1479, 2529
XceI	RCATGY	1 cut(s)	1495
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1739
XhoI	CTCGAG	1 cut(s)	1043
XmnI	GAANNNNTTC	1 cut(s)	2259
XspI	CTAG	4 cut(s)	654, 816, 1515, 2174
ZraI	GACGTC	1 cut(s)	376
Zsp2I	ATGCAT	1 cut(s)	1654

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.