40s ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G02080 AT5G15520 AT5G61170 |
| fragaria_vesca | FvH4_5g14200 FvH4_6g47110 FvH4_6g47110 |
| malus_domestica | MD06G1200400.v1.1 MD09G1064000.v1.1 MD14G1209900.v1.1 MD17G1057300.v1.1 |
| prunus_persica | Prupe.3G257000_v2.0.a1 Prupe.3G257000_v2.0.a1 Prupe.3G257000_v2.0.a1 Prupe.5G203100_v2.0.a1 |
| pyrus_communis | pycom06g17700 pycom111g05360 pycom14g17340 |
| rosa_chinensis | RchiOBHm_Chr2g0166161 RchiOBHm_Chr7g0182731 |
| rosa_laevigata | RLG00000005105 RLG00000021591 |
| rosa_multiflora | Rmu_sc0003127.1_g000026 Rmu_sc0006218.1_g000031 Rmu_sc0024464.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00085150 Rroxscaffold_3G00271030 |
| rosa_rugosa | Rorug02G0520800 Rorug06G0449700 |
| rosa_samantha | Rh2AG586900 Rh2BG598700 Rh2CG569400 Rh2DG608600 Rh7AG053500 Rh7BG053000 Rh7CG054600 Rh7DG052800 |
| rosa_wichuraiana | Rw2G048930 Rw7G004350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 221 |
| AciI | CCGC | 2 cut(s) | 229, 388 |
| AclWI | GGATC | 1 cut(s) | 399 |
| AcoI | YGGCCR | 1 cut(s) | 382 |
| AcuI | CTGAAG | 1 cut(s) | 299 |
| AfaI | GTAC | 2 cut(s) | 124, 161 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 186, 231 |
| AflIII | ACRYGT | 1 cut(s) | 27 |
| AgsI | TTSAA | 1 cut(s) | 130 |
| AjiI | CACGTC | 1 cut(s) | 28 |
| AluBI | AGCT | 2 cut(s) | 91, 136 |
| AluI | AGCT | 2 cut(s) | 91, 136 |
| AlwI | GGATC | 1 cut(s) | 399 |
| AoxI | GGCC | 2 cut(s) | 51, 382 |
| ApeKI | GCWGC | 1 cut(s) | 59 |
| AspLEI | GCGC | 1 cut(s) | 296 |
| AsuHPI | GGTGA | 1 cut(s) | 56 |
| BalI | TGGCCA | 1 cut(s) | 384 |
| BanI | GGYRCC | 1 cut(s) | 221 |
| BbsI | GAAGAC | 1 cut(s) | 122 |
| BbvI | GCAGC | 1 cut(s) | 46 |
| BceAI | ACGGC | 1 cut(s) | 24 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 386, 420 |
| BfoI | RGCGCY | 1 cut(s) | 297 |
| BglII | AGATCT | 1 cut(s) | 170 |
| BisI | GCNGC | 1 cut(s) | 60 |
| BlsI | GCNGC | 1 cut(s) | 61 |
| BmgBI | CACGTC | 1 cut(s) | 28 |
| BmiI | GGNNCC | 1 cut(s) | 223 |
| BmsI | GCATC | 1 cut(s) | 185 |
| BpiI | GAAGAC | 1 cut(s) | 122 |
| BpuEI | CTTGAG | 1 cut(s) | 220 |
| BsaBI | GATNNNNATC | 2 cut(s) | 175, 335 |
| BsaJI | CCNNGG | 1 cut(s) | 180 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 335, 365 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 186, 231 |
| Bse1I | ACTGG | 2 cut(s) | 104, 124 |
| Bse8I | GATNNNNATC | 2 cut(s) | 175, 335 |
| BseDI | CCNNGG | 1 cut(s) | 180 |
| BseGI | GGATG | 2 cut(s) | 176, 374 |
| BseJI | GATNNNNATC | 2 cut(s) | 175, 335 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 186, 231 |
| BseNI | ACTGG | 2 cut(s) | 104, 124 |
| BseXI | GCAGC | 1 cut(s) | 46 |
| BshFI | GGCC | 2 cut(s) | 53, 384 |
| BshNI | GGYRCC | 1 cut(s) | 221 |
| BslFI | GGGAC | 1 cut(s) | 16 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 186, 231 |
| BsmFI | GGGAC | 1 cut(s) | 16 |
| BsnI | GGCC | 2 cut(s) | 53, 384 |
| Bsp143I | GATC | 2 cut(s) | 170, 391 |
| Bsp19I | CCATGG | 1 cut(s) | 180 |
| BspACI | CCGC | 2 cut(s) | 229, 388 |
| BspANI | GGCC | 2 cut(s) | 53, 384 |
| BspLI | GGNNCC | 1 cut(s) | 223 |
| BspPI | GGATC | 1 cut(s) | 399 |
| BspT107I | GGYRCC | 1 cut(s) | 221 |
| BsrI | ACTGG | 2 cut(s) | 104, 124 |
| BssECI | CCNNGG | 1 cut(s) | 180 |
| BssMI | GATC | 2 cut(s) | 170, 391 |
| BssT1I | CCWWGG | 1 cut(s) | 180 |
| Bst4CI | ACNGT | 1 cut(s) | 19 |
| BstC8I | GCNNGC | 2 cut(s) | 138, 386 |
| BstDSI | CCRYGG | 1 cut(s) | 180 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 229 |
| BstF5I | GGATG | 2 cut(s) | 176, 374 |
| BstH2I | RGCGCY | 1 cut(s) | 297 |
| BstHHI | GCGC | 1 cut(s) | 296 |
| BstKTI | GATC | 2 cut(s) | 173, 394 |
| BstMBI | GATC | 2 cut(s) | 170, 391 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 59, 182 |
| BstV1I | GCAGC | 1 cut(s) | 46 |
| BstV2I | GAAGAC | 1 cut(s) | 122 |
| BstX2I | RGATCY | 2 cut(s) | 170, 391 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 407 |
| BstYI | RGATCY | 2 cut(s) | 170, 391 |
| BsuRI | GGCC | 2 cut(s) | 53, 384 |
| BtgI | CCRYGG | 1 cut(s) | 180 |
| BtrI | CACGTC | 1 cut(s) | 28 |
| BtsCI | GGATG | 2 cut(s) | 176, 374 |
| BtsI | GCAGTG | 1 cut(s) | 295 |
| BtsIMutI | CAGTG | 1 cut(s) | 295 |
| Cac8I | GCNNGC | 2 cut(s) | 138, 386 |
| CfoI | GCGC | 1 cut(s) | 296 |
| Csp6I | GTAC | 2 cut(s) | 123, 160 |
| CviAII | CATG | 2 cut(s) | 38, 181 |
| CviJI | RGCY | 4 cut(s) | 53, 91, 136, 384 |
| CviKI_1 | RGCY | 4 cut(s) | 53, 91, 136, 384 |
| CviQI | GTAC | 2 cut(s) | 123, 160 |
| DpnI | GATC | 2 cut(s) | 172, 393 |
| DpnII | GATC | 2 cut(s) | 170, 391 |
| EaeI | YGGCCR | 1 cut(s) | 382 |
| Eco130I | CCWWGG | 1 cut(s) | 180 |
| Eco147I | AGGCCT | 1 cut(s) | 53 |
| Eco57I | CTGAAG | 1 cut(s) | 299 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 229 |
| EcoT14I | CCWWGG | 1 cut(s) | 180 |
| ErhI | CCWWGG | 1 cut(s) | 180 |
| FaeI | CATG | 2 cut(s) | 41, 184 |
| FaiI | YATR | 6 cut(s) | 39, 147, 165, 182, 240, 311 |
| FaqI | GGGAC | 1 cut(s) | 16 |
| FatI | CATG | 2 cut(s) | 37, 180 |
| FauI | CCCGC | 1 cut(s) | 381 |
| Fnu4HI | GCNGC | 1 cut(s) | 60 |
| FokI | GGATG | 2 cut(s) | 163, 361 |
| Fsp4HI | GCNGC | 1 cut(s) | 60 |
| GlaI | GCGC | 1 cut(s) | 295 |
| GluI | GCNGC | 1 cut(s) | 60 |
| HaeII | RGCGCY | 1 cut(s) | 297 |
| HaeIII | GGCC | 2 cut(s) | 53, 384 |
| HhaI | GCGC | 1 cut(s) | 296 |
| Hin1II | CATG | 2 cut(s) | 41, 184 |
| Hin6I | GCGC | 1 cut(s) | 294 |
| HinP1I | GCGC | 1 cut(s) | 294 |
| HinfI | GANTC | 1 cut(s) | 350 |
| HphI | GGTGA | 1 cut(s) | 56 |
| Hpy188III | TCNNGA | 2 cut(s) | 95, 395 |
| HpyAV | CCTTC | 2 cut(s) | 235, 357 |
| HpyCH4III | ACNGT | 1 cut(s) | 19 |
| HpyCH4IV | ACGT | 1 cut(s) | 27 |
| HpyCH4V | TGCA | 3 cut(s) | 176, 325, 425 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 59, 182 |
| HpySE526I | ACGT | 1 cut(s) | 27 |
| Hsp92II | CATG | 2 cut(s) | 41, 184 |
| HspAI | GCGC | 1 cut(s) | 294 |
| Kzo9I | GATC | 2 cut(s) | 170, 391 |
| LmnI | GCTCC | 3 cut(s) | 133, 145, 246 |
| Lsp1109I | GCAGC | 1 cut(s) | 46 |
| LweI | GCATC | 1 cut(s) | 185 |
| MaeII | ACGT | 1 cut(s) | 27 |
| MaeIII | GTNAC | 1 cut(s) | 305 |
| MalI | GATC | 2 cut(s) | 172, 393 |
| MboI | GATC | 2 cut(s) | 170, 391 |
| MboII | GAAGA | 2 cut(s) | 127, 340 |
| MfeI | CAATTG | 1 cut(s) | 320 |
| MflI | RGATCY | 2 cut(s) | 170, 391 |
| MlsI | TGGCCA | 1 cut(s) | 384 |
| MluCI | AATT | 2 cut(s) | 84, 320 |
| MluNI | TGGCCA | 1 cut(s) | 384 |
| MlyI | GAGTC | 1 cut(s) | 344 |
| MnlI | CCTC | 4 cut(s) | 45, 195, 236, 246 |
| Mox20I | TGGCCA | 1 cut(s) | 384 |
| MscI | TGGCCA | 1 cut(s) | 384 |
| Msp20I | TGGCCA | 1 cut(s) | 384 |
| MspA1I | CMGCKG | 1 cut(s) | 388 |
| MunI | CAATTG | 1 cut(s) | 320 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 59, 182 |
| NcoI | CCATGG | 1 cut(s) | 180 |
| NdeII | GATC | 2 cut(s) | 170, 391 |
| NlaIII | CATG | 2 cut(s) | 41, 184 |
| NlaIV | GGNNCC | 1 cut(s) | 223 |
| NmuCI | GTSAC | 1 cut(s) | 305 |
| PceI | AGGCCT | 1 cut(s) | 53 |
| PkrI | GCNGC | 1 cut(s) | 61 |
| PleI | GAGTC | 1 cut(s) | 344 |
| PpsI | GAGTC | 1 cut(s) | 344 |
| PspN4I | GGNNCC | 1 cut(s) | 223 |
| PsuI | RGATCY | 2 cut(s) | 170, 391 |
| RsaI | GTAC | 2 cut(s) | 124, 161 |
| RsaNI | GTAC | 2 cut(s) | 123, 160 |
| SatI | GCNGC | 1 cut(s) | 60 |
| Sau3AI | GATC | 2 cut(s) | 170, 391 |
| SchI | GAGTC | 1 cut(s) | 344 |
| SetI | ASST | 6 cut(s) | 30, 69, 93, 138, 348, 361 |
| SfaNI | GCATC | 1 cut(s) | 185 |
| SmlI | CTYRAG | 1 cut(s) | 199 |
| SmoI | CTYRAG | 1 cut(s) | 199 |
| Sse9I | AATT | 2 cut(s) | 84, 320 |
| SseBI | AGGCCT | 1 cut(s) | 53 |
| SsiI | CCGC | 2 cut(s) | 229, 388 |
| StuI | AGGCCT | 1 cut(s) | 53 |
| StyI | CCWWGG | 1 cut(s) | 180 |
| TaaI | ACNGT | 1 cut(s) | 19 |
| TaiI | ACGT | 1 cut(s) | 30 |
| TaqI | TCGA | 1 cut(s) | 396 |
| TasI | AATT | 2 cut(s) | 84, 320 |
| TscAI | CASTG | 1 cut(s) | 295 |
| TseFI | GTSAC | 1 cut(s) | 305 |
| TseI | GCWGC | 1 cut(s) | 59 |
| Tsp45I | GTSAC | 1 cut(s) | 305 |
| TspDTI | ATGAA | 1 cut(s) | 347 |
| TspGWI | ACGGA | 3 cut(s) | 119, 132, 427 |
| TspRI | CASTG | 1 cut(s) | 295 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 229 |