ATP-dependent helicase hrq1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G08110 AT5G08110 AT5G08110 |
| fragaria_vesca | FvH4_5g13410 FvH4_5g13410 |
| malus_domestica | MD14G1216300.v1.1 |
| prunus_persica | Prupe.5G209300_v2.0.a1 Prupe.5G209800_v2.0.a1 Prupe.5G209800_v2.0.a1 Prupe.5G209800_v2.0.a1 Prupe.5G209800_v2.0.a1 Prupe.5G209800_v2.0.a1 Prupe.5G209800_v2.0.a1 Prupe.5G209800_v2.0.a1 |
| pyrus_communis | pycom14g17910 |
| rosa_chinensis | RchiOBHm_Chr7g0183711 |
| rosa_laevigata | RLG00000005031 |
| rosa_multiflora | Rmu_sc0003610.1_g000027 |
| rosa_roxburghii | Rroxscaffold_3G00270310 |
| rosa_rugosa | Rorug06G0459500 Rorug06G0459500 |
| rosa_samantha | Rh7AG060200 Rh7BG060400 Rh7CG062000 Rh7DG060300 |
| rosa_wichuraiana | Rw7G005000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 723 |
| Acc65I | GGTACC | 1 cut(s) | 1956 |
| AccB1I | GGYRCC | 1 cut(s) | 1956 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 853 |
| AccI | GTMKAC | 1 cut(s) | 1242 |
| AccII | CGCG | 1 cut(s) | 673 |
| AciI | CCGC | 2 cut(s) | 673, 2446 |
| AclI | AACGTT | 1 cut(s) | 2253 |
| AclWI | GGATC | 4 cut(s) | 381, 794, 954, 1919 |
| AcsI | RAATTY | 3 cut(s) | 52, 1212, 2132 |
| AcuI | CTGAAG | 1 cut(s) | 1202 |
| AfaI | GTAC | 7 cut(s) | 91, 458, 1071, 1958, 2010, 2118, 2385 |
| AfeI | AGCGCT | 1 cut(s) | 591 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 37, 853, 1039, 1354 |
| AflII | CTTAAG | 1 cut(s) | 757 |
| AflIII | ACRYGT | 1 cut(s) | 784 |
| AjnI | CCWGG | 3 cut(s) | 85, 1402, 2403 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1883, 1915 |
| Alw21I | GWGCWC | 4 cut(s) | 235, 454, 2095, 2412 |
| Alw26I | GTCTC | 3 cut(s) | 232, 757, 2383 |
| Alw44I | GTGCAC | 1 cut(s) | 2091 |
| AlwI | GGATC | 4 cut(s) | 381, 794, 954, 1919 |
| Ama87I | CYCGRG | 1 cut(s) | 1917 |
| Aor51HI | AGCGCT | 1 cut(s) | 591 |
| AoxI | GGCC | 3 cut(s) | 1490, 1877, 1914 |
| ApaLI | GTGCAC | 1 cut(s) | 2091 |
| ApoI | RAATTY | 3 cut(s) | 52, 1212, 2132 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1215, 1646, 2340 |
| Asp718I | GGTACC | 1 cut(s) | 1956 |
| AspLEI | GCGC | 3 cut(s) | 592, 597, 673 |
| AspS9I | GGNCC | 2 cut(s) | 1490, 1915 |
| AsuC2I | CCSGG | 3 cut(s) | 1444, 2333, 2364 |
| AsuHPI | GGTGA | 3 cut(s) | 53, 569, 2229 |
| AsuNHI | GCTAGC | 1 cut(s) | 586 |
| AvaI | CYCGRG | 1 cut(s) | 1917 |
| BaeGI | GKGCMC | 1 cut(s) | 2095 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1948, 1981 |
| BanI | GGYRCC | 1 cut(s) | 1956 |
| BanII | GRGCYC | 1 cut(s) | 2412 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1774, 1806 |
| BbsI | GAAGAC | 1 cut(s) | 228 |
| Bbv12I | GWGCWC | 4 cut(s) | 235, 454, 2095, 2412 |
| BbvCI | CCTCAGC | 1 cut(s) | 1881 |
| BccI | CCATC | 9 cut(s) | 39, 109, 333, 521, 548, 890, 1242, 1307, 1968 |
| BceAI | ACGGC | 3 cut(s) | 788, 1815, 1929 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 759, 793, 2256, 2290 |
| BciT130I | CCWGG | 3 cut(s) | 87, 1404, 2405 |
| BclI | TGATCA | 2 cut(s) | 1498, 2538 |
| BcnI | CCSGG | 3 cut(s) | 1444, 2333, 2364 |
| BcoDI | GTCTC | 3 cut(s) | 232, 757, 2383 |
| BfaI | CTAG | 8 cut(s) | 209, 419, 587, 606, 912, 1203, 1416, 1971 |
| BfmI | CTRYAG | 1 cut(s) | 409 |
| BfoI | RGCGCY | 1 cut(s) | 593 |
| BfrI | CTTAAG | 1 cut(s) | 757 |
| BglII | AGATCT | 1 cut(s) | 284 |
| Bme1390I | CCNGG | 6 cut(s) | 87, 1404, 1444, 2333, 2364, 2405 |
| BmeT110I | CYCGRG | 1 cut(s) | 1917 |
| BmgT120I | GGNCC | 2 cut(s) | 1490, 1915 |
| BmiI | GGNNCC | 4 cut(s) | 1958, 2164, 2170, 2295 |
| BmrFI | CCNGG | 6 cut(s) | 87, 1404, 1444, 2333, 2364, 2405 |
| BmsI | GCATC | 4 cut(s) | 133, 192, 2243, 2368 |
| BmtI | GCTAGC | 1 cut(s) | 590 |
| BpiI | GAAGAC | 1 cut(s) | 228 |
| BpmI | CTGGAG | 2 cut(s) | 2280, 2426 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1881 |
| BpuEI | CTTGAG | 3 cut(s) | 468, 1012, 1888 |
| BpuMI | CCSGG | 3 cut(s) | 1444, 2333, 2364 |
| BsaI | GGTCTC | 1 cut(s) | 232 |
| BsaJI | CCNNGG | 2 cut(s) | 18, 1741 |
| BsaWI | WCCGGW | 1 cut(s) | 2165 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 37, 853, 1039, 1354 |
| Bse118I | RCCGGY | 1 cut(s) | 2355 |
| Bse1I | ACTGG | 5 cut(s) | 63, 74, 107, 390, 1897 |
| Bse3DI | GCAATG | 3 cut(s) | 98, 1272, 1987 |
| BseBI | CCWGG | 3 cut(s) | 87, 1404, 2405 |
| BseDI | CCNNGG | 2 cut(s) | 18, 1741 |
| BseGI | GGATG | 6 cut(s) | 82, 207, 924, 1048, 1893, 2359 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 37, 853, 1039, 1354 |
| BseMI | GCAATG | 3 cut(s) | 98, 1272, 1987 |
| BseMII | CTCAG | 5 cut(s) | 581, 1292, 1613, 1895, 2466 |
| BseNI | ACTGG | 5 cut(s) | 63, 74, 107, 390, 1897 |
| BseRI | GAGGAG | 2 cut(s) | 587, 1462 |
| BseSI | GKGCMC | 1 cut(s) | 2095 |
| BsgI | GTGCAG | 1 cut(s) | 273 |
| Bsh1236I | CGCG | 1 cut(s) | 673 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2356 |
| BshFI | GGCC | 3 cut(s) | 1492, 1879, 1916 |
| BshNI | GGYRCC | 1 cut(s) | 1956 |
| BsiEI | CGRYCG | 1 cut(s) | 2356 |
| BsiHKAI | GWGCWC | 4 cut(s) | 235, 454, 2095, 2412 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1917 |
| BsiSI | CCGG | 5 cut(s) | 1443, 2166, 2333, 2356, 2364 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 37, 853, 1039, 1354 |
| BsmAI | GTCTC | 3 cut(s) | 232, 757, 2383 |
| BsnI | GGCC | 3 cut(s) | 1492, 1879, 1916 |
| Bso31I | GGTCTC | 1 cut(s) | 232 |
| BsoBI | CYCGRG | 1 cut(s) | 1917 |
| Bsp1286I | GDGCHC | 4 cut(s) | 235, 454, 2095, 2412 |
| Bsp1407I | TGTACA | 1 cut(s) | 2383 |
| Bsp19I | CCATGG | 1 cut(s) | 18 |
| BspACI | CCGC | 2 cut(s) | 673, 2446 |
| BspANI | GGCC | 3 cut(s) | 1492, 1879, 1916 |
| BspCNI | CTCAG | 5 cut(s) | 580, 1291, 1614, 1894, 2465 |
| BspFNI | CGCG | 1 cut(s) | 673 |
| BspLI | GGNNCC | 4 cut(s) | 1958, 2164, 2170, 2295 |
| BspOI | GCTAGC | 1 cut(s) | 590 |
| BspPI | GGATC | 4 cut(s) | 381, 794, 954, 1919 |
| BspQI | GCTCTTC | 1 cut(s) | 926 |
| BspT107I | GGYRCC | 1 cut(s) | 1956 |
| BspTI | CTTAAG | 1 cut(s) | 757 |
| BspTNI | GGTCTC | 1 cut(s) | 232 |
| BsrDI | GCAATG | 3 cut(s) | 98, 1272, 1987 |
| BsrFI | RCCGGY | 1 cut(s) | 2355 |
| BsrGI | TGTACA | 1 cut(s) | 2383 |
| BsrI | ACTGG | 5 cut(s) | 63, 74, 107, 390, 1897 |
| BssAI | RCCGGY | 1 cut(s) | 2355 |
| BssECI | CCNNGG | 2 cut(s) | 18, 1741 |
| BssT1I | CCWWGG | 2 cut(s) | 18, 1741 |
| Bst2UI | CCWGG | 3 cut(s) | 87, 1404, 2405 |
| Bst4CI | ACNGT | 5 cut(s) | 198, 299, 958, 1999, 2090 |
| Bst6I | CTCTTC | 3 cut(s) | 926, 1392, 1677 |
| BstAFI | CTTAAG | 1 cut(s) | 757 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 173, 211, 1343 |
| BstAUI | TGTACA | 1 cut(s) | 2383 |
| BstC8I | GCNNGC | 5 cut(s) | 588, 1112, 1435, 2152, 2229 |
| BstDEI | CTNAG | 9 cut(s) | 128, 494, 567, 1278, 1566, 1622, 1768, 1881, 2452 |
| BstDSI | CCRYGG | 1 cut(s) | 18 |
| BstF5I | GGATG | 6 cut(s) | 82, 207, 924, 1048, 1893, 2359 |
| BstFNI | CGCG | 1 cut(s) | 673 |
| BstH2I | RGCGCY | 1 cut(s) | 593 |
| BstHHI | GCGC | 3 cut(s) | 592, 597, 673 |
| BstMAI | GTCTC | 3 cut(s) | 232, 757, 2383 |
| BstMCI | CGRYCG | 1 cut(s) | 2356 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 173, 211, 506, 592, 830, 1107, 1262, 1343, 1439 |
| BstNI | CCWGG | 3 cut(s) | 87, 1404, 2405 |
| BstNSI | RCATGY | 5 cut(s) | 218, 313, 641, 788, 2231 |
| BstSCI | CCNGG | 6 cut(s) | 85, 1402, 1442, 2331, 2362, 2403 |
| BstSFI | CTRYAG | 1 cut(s) | 409 |
| BstSLI | GKGCMC | 1 cut(s) | 2095 |
| BstUI | CGCG | 1 cut(s) | 673 |
| BstV2I | GAAGAC | 1 cut(s) | 228 |
| BstX2I | RGATCY | 3 cut(s) | 284, 386, 1924 |
| BstYI | RGATCY | 3 cut(s) | 284, 386, 1924 |
| BsuRI | GGCC | 3 cut(s) | 1492, 1879, 1916 |
| BtgI | CCRYGG | 1 cut(s) | 18 |
| BtsCI | GGATG | 6 cut(s) | 82, 207, 924, 1048, 1893, 2359 |
| BtsIMutI | CAGTG | 4 cut(s) | 47, 114, 397, 1619 |
| Cac8I | GCNNGC | 5 cut(s) | 588, 1112, 1435, 2152, 2229 |
| CfoI | GCGC | 3 cut(s) | 592, 597, 673 |
| Cfr10I | RCCGGY | 1 cut(s) | 2355 |
| Cfr13I | GGNCC | 2 cut(s) | 1490, 1915 |
| CseI | GACGC | 1 cut(s) | 1571 |
| Csp6I | GTAC | 7 cut(s) | 90, 457, 1070, 1957, 2009, 2117, 2384 |
| CviQI | GTAC | 7 cut(s) | 90, 457, 1070, 1957, 2009, 2117, 2384 |
| DdeI | CTNAG | 9 cut(s) | 128, 494, 567, 1278, 1566, 1622, 1768, 1881, 2452 |
| Eam1104I | CTCTTC | 3 cut(s) | 926, 1392, 1677 |
| EarI | CTCTTC | 3 cut(s) | 926, 1392, 1677 |
| Ecl136II | GAGCTC | 1 cut(s) | 2410 |
| Eco130I | CCWWGG | 2 cut(s) | 18, 1741 |
| Eco24I | GRGCYC | 1 cut(s) | 2412 |
| Eco31I | GGTCTC | 1 cut(s) | 232 |
| Eco47III | AGCGCT | 1 cut(s) | 591 |
| Eco53kI | GAGCTC | 1 cut(s) | 2410 |
| Eco57I | CTGAAG | 1 cut(s) | 1202 |
| Eco88I | CYCGRG | 1 cut(s) | 1917 |
| EcoICRI | GAGCTC | 1 cut(s) | 2410 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1490 |
| EcoRII | CCWGG | 3 cut(s) | 85, 1402, 2403 |
| EcoT14I | CCWWGG | 2 cut(s) | 18, 1741 |
| EcoT38I | GRGCYC | 1 cut(s) | 2412 |
| ErhI | CCWWGG | 2 cut(s) | 18, 1741 |
| FbaI | TGATCA | 2 cut(s) | 1498, 2538 |
| FblI | GTMKAC | 1 cut(s) | 1242 |
| FokI | GGATG | 6 cut(s) | 69, 214, 911, 1055, 1880, 2346 |
| FriOI | GRGCYC | 1 cut(s) | 2412 |
| FspBI | CTAG | 8 cut(s) | 209, 419, 587, 606, 912, 1203, 1416, 1971 |
| GlaI | GCGC | 3 cut(s) | 591, 596, 672 |
| GsuI | CTGGAG | 2 cut(s) | 2280, 2426 |
| HaeII | RGCGCY | 1 cut(s) | 593 |
| HaeIII | GGCC | 3 cut(s) | 1492, 1879, 1916 |
| HapII | CCGG | 5 cut(s) | 1443, 2166, 2333, 2356, 2364 |
| HgaI | GACGC | 1 cut(s) | 1571 |
| HhaI | GCGC | 3 cut(s) | 592, 597, 673 |
| Hin6I | GCGC | 3 cut(s) | 590, 595, 671 |
| HinP1I | GCGC | 3 cut(s) | 590, 595, 671 |
| HincII | GTYRAC | 2 cut(s) | 1561, 2002 |
| HindII | GTYRAC | 2 cut(s) | 1561, 2002 |
| HindIII | AAGCTT | 3 cut(s) | 1112, 1319, 1765 |
| HpaII | CCGG | 5 cut(s) | 1443, 2166, 2333, 2356, 2364 |
| HphI | GGTGA | 3 cut(s) | 53, 569, 2229 |
| Hpy166II | GTNNAC | 7 cut(s) | 44, 869, 1121, 1243, 1561, 2002, 2093 |
| Hpy8I | GTNNAC | 7 cut(s) | 44, 869, 1121, 1243, 1561, 2002, 2093 |
| Hpy99I | CGWCG | 1 cut(s) | 774 |
| HpyAV | CCTTC | 7 cut(s) | 22, 89, 466, 813, 1470, 1481, 1715 |
| HpyCH4III | ACNGT | 5 cut(s) | 198, 299, 958, 1999, 2090 |
| HpyCH4IV | ACGT | 3 cut(s) | 24, 1751, 2253 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 173, 211, 506, 592, 830, 1107, 1262, 1343, 1439 |
| HpyF3I | CTNAG | 9 cut(s) | 128, 494, 567, 1278, 1566, 1622, 1768, 1881, 2452 |
| HpySE526I | ACGT | 3 cut(s) | 24, 1751, 2253 |
| HspAI | GCGC | 3 cut(s) | 590, 595, 671 |
| KpnI | GGTACC | 1 cut(s) | 1960 |
| Ksp22I | TGATCA | 2 cut(s) | 1498, 2538 |
| LguI | GCTCTTC | 1 cut(s) | 926 |
| LmnI | GCTCC | 4 cut(s) | 728, 1234, 2299, 2407 |
| LweI | GCATC | 4 cut(s) | 133, 192, 2243, 2368 |
| MaeI | CTAG | 8 cut(s) | 209, 419, 587, 606, 912, 1203, 1416, 1971 |
| MaeII | ACGT | 3 cut(s) | 24, 1751, 2253 |
| MaeIII | GTNAC | 8 cut(s) | 155, 1268, 1381, 1759, 1936, 2031, 2075, 2141 |
| MfeI | CAATTG | 1 cut(s) | 1542 |
| MflI | RGATCY | 3 cut(s) | 284, 386, 1924 |
| MhlI | GDGCHC | 4 cut(s) | 235, 454, 2095, 2412 |
| MlyI | GAGTC | 4 cut(s) | 344, 1238, 2039, 2534 |
| MmeI | TCCRAC | 3 cut(s) | 491, 1348, 1914 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1215, 1646, 2340 |
| MseI | TTAA | 5 cut(s) | 536, 758, 2105, 2414, 2544 |
| MslI | CAYNNNNRTG | 4 cut(s) | 39, 789, 1377, 1614 |
| MspA1I | CMGCKG | 1 cut(s) | 2448 |
| MspCI | CTTAAG | 1 cut(s) | 757 |
| MspI | CCGG | 5 cut(s) | 1443, 2166, 2333, 2356, 2364 |
| MspR9I | CCNGG | 6 cut(s) | 87, 1404, 1444, 2333, 2364, 2405 |
| MteI | GCGCNGCGC | 1 cut(s) | 593 |
| MunI | CAATTG | 1 cut(s) | 1542 |
| MvaI | CCWGG | 3 cut(s) | 87, 1404, 2405 |
| MvnI | CGCG | 1 cut(s) | 673 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 173, 211, 506, 592, 830, 1107, 1262, 1343, 1439 |
| NciI | CCSGG | 3 cut(s) | 1444, 2333, 2364 |
| NcoI | CCATGG | 1 cut(s) | 18 |
| NheI | GCTAGC | 1 cut(s) | 586 |
| NlaIV | GGNNCC | 4 cut(s) | 1958, 2164, 2170, 2295 |
| NmuCI | GTSAC | 3 cut(s) | 1759, 2031, 2141 |
| NspI | RCATGY | 5 cut(s) | 218, 313, 641, 788, 2231 |
| PaeI | GCATGC | 1 cut(s) | 2231 |
| PciI | ACATGT | 1 cut(s) | 784 |
| PciSI | GCTCTTC | 1 cut(s) | 926 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1215, 1646, 2340 |
| PfeI | GAWTC | 6 cut(s) | 95, 622, 886, 934, 967, 2341 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 853 |
| PfoI | TCCNGGA | 2 cut(s) | 2362, 2403 |
| PleI | GAGTC | 4 cut(s) | 343, 1238, 2038, 2533 |
| PpsI | GAGTC | 4 cut(s) | 343, 1238, 2038, 2533 |
| PscI | ACATGT | 1 cut(s) | 784 |
| PsiI | TTATAA | 1 cut(s) | 723 |
| Psp124BI | GAGCTC | 1 cut(s) | 2412 |
| Psp1406I | AACGTT | 1 cut(s) | 2253 |
| Psp6I | CCWGG | 3 cut(s) | 85, 1402, 2403 |
| PspGI | CCWGG | 3 cut(s) | 85, 1402, 2403 |
| PspN4I | GGNNCC | 4 cut(s) | 1958, 2164, 2170, 2295 |
| PspPI | GGNCC | 2 cut(s) | 1490, 1915 |
| PsuI | RGATCY | 3 cut(s) | 284, 386, 1924 |
| RsaI | GTAC | 7 cut(s) | 91, 458, 1071, 1958, 2010, 2118, 2385 |
| RsaNI | GTAC | 7 cut(s) | 90, 457, 1070, 1957, 2009, 2117, 2384 |
| RseI | CAYNNNNRTG | 4 cut(s) | 39, 789, 1377, 1614 |
| SacI | GAGCTC | 1 cut(s) | 2412 |
| SapI | GCTCTTC | 1 cut(s) | 926 |
| SaqAI | TTAA | 5 cut(s) | 536, 758, 2105, 2414, 2544 |
| Sau96I | GGNCC | 2 cut(s) | 1490, 1915 |
| SchI | GAGTC | 4 cut(s) | 344, 1238, 2039, 2534 |
| ScrFI | CCNGG | 6 cut(s) | 87, 1404, 1444, 2333, 2364, 2405 |
| SduI | GDGCHC | 4 cut(s) | 235, 454, 2095, 2412 |
| SfaNI | GCATC | 4 cut(s) | 133, 192, 2243, 2368 |
| SfcI | CTRYAG | 1 cut(s) | 409 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 39, 789, 1377, 1614 |
| SmlI | CTYRAG | 4 cut(s) | 483, 757, 1027, 1903 |
| SmoI | CTYRAG | 4 cut(s) | 483, 757, 1027, 1903 |
| SphI | GCATGC | 1 cut(s) | 2231 |
| SsiI | CCGC | 2 cut(s) | 673, 2446 |
| SspI | AATATT | 5 cut(s) | 688, 979, 1193, 1505, 2021 |
| SspMI | CTAG | 8 cut(s) | 209, 419, 587, 606, 912, 1203, 1416, 1971 |
| SstI | GAGCTC | 1 cut(s) | 2412 |
| StyD4I | CCNGG | 6 cut(s) | 85, 1402, 1442, 2331, 2362, 2403 |
| StyI | CCWWGG | 2 cut(s) | 18, 1741 |
| TaaI | ACNGT | 5 cut(s) | 198, 299, 958, 1999, 2090 |
| TaiI | ACGT | 3 cut(s) | 27, 1754, 2256 |
| TaqI | TCGA | 2 cut(s) | 769, 2137 |
| TatI | WGTACW | 4 cut(s) | 456, 2008, 2116, 2383 |
| TauI | GCSGC | 1 cut(s) | 2448 |
| TfiI | GAWTC | 6 cut(s) | 95, 622, 886, 934, 967, 2341 |
| Tru1I | TTAA | 5 cut(s) | 536, 758, 2105, 2414, 2544 |
| Tru9I | TTAA | 5 cut(s) | 536, 758, 2105, 2414, 2544 |
| TscAI | CASTG | 4 cut(s) | 54, 114, 397, 1626 |
| TseFI | GTSAC | 3 cut(s) | 1759, 2031, 2141 |
| Tsp45I | GTSAC | 3 cut(s) | 1759, 2031, 2141 |
| TspRI | CASTG | 4 cut(s) | 54, 114, 397, 1626 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 853 |
| Vha464I | CTTAAG | 1 cut(s) | 757 |
| VneI | GTGCAC | 1 cut(s) | 2091 |
| XapI | RAATTY | 3 cut(s) | 52, 1212, 2132 |
| XbaI | TCTAGA | 2 cut(s) | 605, 1970 |
| XceI | RCATGY | 5 cut(s) | 218, 313, 641, 788, 2231 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 979 |
| XmiI | GTMKAC | 1 cut(s) | 1242 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1215, 1646, 2340 |
| XspI | CTAG | 8 cut(s) | 209, 419, 587, 606, 912, 1203, 1416, 1971 |