Prupe.5G209800_v2.0.a1

ATP-dependent helicase hrq1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
16687185 .. 16697714
10530 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G209800.1

Sequence Viewer

Length: 3696 bp
ATGTCAGAAAACGAGAGACAAATCCAGGTCCGTACACTAGTCGGAGAATCAAGCACTGTTTCAGTCTCCGTCAACGACACCATTGAAAACTTCAAGCGCCTTCTCAAGCGTTCCTTCCCTCCCGCCACTCGCTCTCTCAATTTTCACCTTTTTTTCAAGGGTGGTAAGTTGGGTTTACAGAGTAAGATAGGTAGCCTCAACATTAAGCCTGACGAATTTCTAGTGCTTGTCCCGTTTTCTAAGAAGGAGCCGAATAATAATCAGACCCAGAAATCTGATCAATCTAAAGCTTCATTGAATGGCTCTGATAAAAGCTTCACCATATCAAACTTTGCCGATTCGGCGTGGTCTGATATGATGCAAGACTTATCGTCTTTACGGGACAATTCAAGTTATCAAACCCCAATGGAGCCTATTATTGGAAGTTTCAATCTTGGAGATAGAACGGAAGCAATGAATGAAACTGCTACTTGTTGCTCTTCTGGAGCAAAGCGCAAAAAGGGTCTTGATTCTGATGACATTATGTTGGATATATTGCGGTGTAGTAGAAGAAGCAAGAATGTCCTTGATGAACATAACTTTACAAGGTTCGTTGAGGTTTTGGCGTCAGTGAGTTGTTTGTCCGATCCCTATAATGGGGACTGCATGTTGGGGAGAAGAGTTCATTTAAGGCGCCAGGGCCTTGGCACGGGACTGCCTAAAAGCAATGGTAGTTCATGCTTGTGTCCACCGTGGTTGAAGATAATCATGAAGGCATTTGCATTCTTAAACACTTTTTCTGCATTTATTCAATCACGGCAGGAGAGAACAACCTCAATCCTTTTGGAGCAAGCGCTGGGCCAGCTTCCGAAATTTGGAGTTGAACTTGGTTTGAAGGACATAAAGAATCTTTCAGTTATTTCTCCAAAGGTAGTACGTTTTGTAAATAAGAATGCAGAGGAGACAAGTTCTGGTAATGCGATTGTTATCATCAATTGTTCAACAGAGGATAATCGTAAACATGGTTGCAAACAGATGGATGTACCAATGATTGTCAGTGTATTGAAGATACGAGAAAGTTCTTTCAGAAGTAATTTGTGGAAGGCTATAGAGTGGTTATTGTTTAAAACTGGAAATGAGATTTCCAGGGATTTTTCCTTGGAAGACTTGCTTATATCTGTGAAGGAATGTGACTCTGCTGCAAGAGGAAATGAAGCAAAACAATCAAGGATAACCCCTGCAGCTTCAAATAATTTTGACCGAAAACACTCTGCCGCTTCAAGAACTCATCGATGCCATGGTACAGATTCATTGCTACCAGAGGAGATGGTTGAGCATCTTAGAAAAGGCATTGGTGCGAAAGGGCAGGTAGTGCATGTTGAAGACATTGGTGCTCGGAGACCTGTTTATGTAGAAGTTCCACATGAACTATCTGAAAATATGAGATCTGCACTTCACAGTATTGGAATCACGCAACTATATAGCCATCAGGCAGAGTCAATACAAGCCTCACTTTCTGGGAAGAATGTTGTTGTGGCAACAATGACATCCAGTGGGAAATCTCTTTGCTATAATTTGCCCGTCTTAGAAGTTCTGTCGCAGAGTTCTTCATCATGTGCTCTATACATATTTCCAACGAAGGCTTTAGCTCAAGATCAACTAAGAGCTTTGTTGGCTATGACCAAAGGATTTGATGGTAGCTTAAACATTGGTGTATATGATGGTGATACTACTCAGGAGGACAGGACATGGCTGCGCCATAATTCTAGATTGCTAATCACGAATCCAGATATGTTGCATGTATCAATCCTACCACACCATAGACGATTTGCGCGGATTTTGGAAAATATTAGGTTTGTAGTCATTGATGAGGCACATATTTATAAGGGAGCATTTGGATGTCATACTGCTTTTGTCTTAAGGAGACTTCGACGGCTCTGCTCACATGTGTATGGAAGTGATCCTTCTTTTGTGTTTTCAACTGCAACTTCGGCAAATCCTCACGACCATTGTATGGAACTTGCAAGTTTACCAACTTTAGAGCTGATTCAGAATGATGGAAGTCCTGCTGCTAGAAAGCTCTTCATCCTTTGGAATCCTTTTGTGGATCAAGAAACTGTGGTGAAGAATCCCAATAATATTATGGTAAATGGTAAATCTTCTGATGAAAGTGCCAACTTCAAAAGTTCAAGCCCGATTGTGGATGTTTCATGCCTCTTTGCTGAAATGGTACAGCATGGACTACGCTGCCTTGCTTTCTGCAAAACACGCAAGCTTTGTGAACTTGTGTTGTGCTATACGCGTGAAATTCTTCAGCAGACAGCTCCCCATCTGGTAGACTCTATATGTGCTTATCGTGCTGGTTACATTGCTCAGAATAGGAGAAGAATAGAGAGTGATTTTTTTGATGGAAAGCTTTGTGGTATTGCTGCAACAAATGCCCTTGAATTGGGTATTGATGTTGGACACATTGATGTAACTCTTCATTTAGGTTTTCCTGGTAGTATTTCTAGCTTGTGGCAACAAGCTGGCAGAGCCGGGAGGAGAGATAGACCTTCTCTTGCTGTGTATGTTGCTTTTGAAGGGCCTCTTGATCAATATTTCATGAAATATCCAAAGAAACTTTTTGGAAGCCCAATTGAGTGCTGTCATGTTGATGCTAAGAACCAACAGGTTCTTGCACAGCAGTTGGTTTGTGCTGCTCACGAACATCCACTGAGTTTGTCTTATGACGAGAAGTTTTTCGGTTCTGGTTTAGACAGTGCCATAGTGTCTCTTAAAAATAGAGGATATTTGAGTTATGATTCATTATGTAATTCTTCTGCTAAGTTTTGGAACTATATTGGGCACGAGAAAATGCCTTCACATTCAGTTAGTATACGATCAATAGAAACTGAGAGATACAAAGTTATAGACCAGCAAAAGAAAGAAATCCTTGAAGAGATTGAGGAAAGCAGTGCTTTTTTTCAGGTATATGAAGGTGCTGTTTATATGAACCAAGGAAAGACGTATCTGGTCACAAGCTTAGATTTATCACGTAAGATTGCTTCGTGCTATGTGGCTGATTTGAAGTATTACACAAAAAGCCGTGATTGCACAGATATTCATGTCATGGGCAGTAAATATGCTTATCGGCCTCAGCTCTCCAACATCCAGTTCTCAAGAACAACAGCCCGAGCAGATCCTTGCAAAGTAACAACTACATGGTTAGGGTACCATCGTGTATCTAGAGGAAGCAATGAGATAATGGAAACAGTTGACCATGTACTTCCAAAATATTCTTATGAGTCACAGGCAGTTTGGGTTTCGGTTCCACAATCAGTAAAAGAAGCTGTAATTATGAAAGACCTTGATTTCCGAGCAGGGCTGCATGCTGCATCACATGTTGTTCTAAACGTTGTGCCTTTACGAATAATATGCAACTTATCAGACTTGGCTCCAGAGTGTATAAACCCAGAATACACCCGCTATTACCCAGAAAGGATTCTATTATATGACCGGCATCCCGGAGGAAGTGGTGTCTCTGTACAGGTTCAGCCGATTTTCATGGAGCTCTTAATTGCTGCTTTGGAACTTCTTACATCTTGCCGCTGCTCAGAACATGGAGGCTGCCCTAATTGTGTTCAAAGTTTTGCTTGTAAGGAGTATAATGAGGGTTTGCACAAGGAGTCAGCAATTATGATCATTAAGGGTGTTCTTGATGCGGAAAAATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1232

Amino Acids

137.5

Weight (kDa)

8.3

Isoelectric Point (pI)

47.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1863
Acc36I ACCTGC 1 cut(s) 1336
Acc65I GGTACC 1 cut(s) 3192
AccB1I GGYRCC 2 cut(s) 672, 3192
AccB7I CCANNNNNTGG 1 cut(s) 1993
AccI GTMKAC 2 cut(s) 2316, 2857
AccII CGCG 2 cut(s) 1813, 2281
AciI CCGC 7 cut(s) 123, 538, 1254, 1813, 3445, 3568, 3683
AclI AACGTT 1 cut(s) 3375
AclWI GGATC 4 cut(s) 620, 1934, 2094, 3155
AcsI RAATTY 3 cut(s) 215, 851, 2286
AcuI CTGAAG 1 cut(s) 2276
AcyI GRCGYC 2 cut(s) 605, 673
AfaI GTAC 8 cut(s) 34, 915, 1023, 1282, 2211, 3194, 3246, 3507
AfeI AGCGCT 1 cut(s) 834
AfiI CCNNNNNNNGG 8 cut(s) 419, 635, 636, 688, 854, 1993, 2179, 2428
AflII CTTAAG 1 cut(s) 1897
AflIII ACRYGT 3 cut(s) 1924, 2279, 3361
AhdI GACNNNNNGTC 1 cut(s) 370
AhlI ACTAGT 1 cut(s) 37
AjnI CCWGG 4 cut(s) 24, 675, 1124, 2476
AjuI GAANNNNNNNTTGG 2 cut(s) 3119, 3151
Alw21I GWGCWC 3 cut(s) 1375, 1600, 3534
Alw26I GTCTC 7 cut(s) 10, 70, 935, 1372, 1897, 2757, 3505
AlwI GGATC 4 cut(s) 620, 1934, 2094, 3155
Ama87I CYCGRG 1 cut(s) 3153
Aor51HI AGCGCT 1 cut(s) 834
AoxI GGCC 4 cut(s) 679, 838, 2564, 3113
ApoI RAATTY 3 cut(s) 215, 851, 2286
Asp700I GAANNNNTTC 3 cut(s) 2289, 2720, 3462
Asp718I GGTACC 1 cut(s) 3192
AspLEI GCGC 6 cut(s) 99, 495, 675, 835, 1737, 1813
AspS9I GGNCC 4 cut(s) 28, 679, 838, 2564
AsuC2I CCSGG 2 cut(s) 2518, 3486
AsuHPI GGTGA 4 cut(s) 137, 310, 1715, 2113
AvaI CYCGRG 1 cut(s) 3153
AvaII GGWCC 1 cut(s) 28
BaeGI GKGCMC 1 cut(s) 2829
BaeI ACNNNNGTAYC 2 cut(s) 3184, 3217
BanI GGYRCC 2 cut(s) 672, 3192
BanII GRGCYC 1 cut(s) 3534
BarI GAAGNNNNNNTAC 2 cut(s) 3010, 3042
BauI CACGAG 1 cut(s) 2828
BbsI GAAGAC 2 cut(s) 1149, 1368
Bbv12I GWGCWC 3 cut(s) 1375, 1600, 3534
BbvCI CCTCAGC 1 cut(s) 3117
BccI CCATC 9 cut(s) 1009, 1300, 1473, 1667, 1694, 2030, 2316, 2381, 3204
BceAI ACGGC 3 cut(s) 812, 1928, 3051
BcgI CGANNNNNNTGC 4 cut(s) 1899, 1933, 3378, 3412
BciT130I CCWGG 4 cut(s) 26, 677, 1126, 2478
BclI TGATCA 3 cut(s) 277, 2572, 3660
BcnI CCSGG 2 cut(s) 2518, 3486
BcoDI GTCTC 7 cut(s) 10, 70, 935, 1372, 1897, 2757, 3505
BcuI ACTAGT 1 cut(s) 37
BfaI CTAG 6 cut(s) 38, 221, 1746, 2052, 2490, 3207
BfmI CTRYAG 2 cut(s) 1086, 1218
BfoI RGCGCY 3 cut(s) 100, 676, 836
BfrI CTTAAG 1 cut(s) 1897
BfuAI ACCTGC 1 cut(s) 1336
BglI GCCNNNNNGGC 1 cut(s) 341
BglII AGATCT 1 cut(s) 1424
Bme1390I CCNGG 6 cut(s) 26, 677, 1126, 2478, 2518, 3486
Bme18I GGWCC 1 cut(s) 28
BmeRI GACNNNNNGTC 1 cut(s) 370
BmeT110I CYCGRG 1 cut(s) 3153
BmgT120I GGNCC 4 cut(s) 28, 679, 838, 2564
BmiI GGNNCC 6 cut(s) 249, 411, 674, 3194, 3291, 3417
BmrFI CCNGG 6 cut(s) 26, 677, 1126, 2478, 2518, 3486
BmsI GCATC 7 cut(s) 348, 1262, 1324, 2626, 3365, 3490, 3670
BpiI GAAGAC 2 cut(s) 1149, 1368
BpmI CTGGAG 2 cut(s) 504, 3402
Bpu10I CCTNAGC 1 cut(s) 3117
BpuEI CTTGAG 3 cut(s) 89, 1614, 3124
BpuMI CCSGG 2 cut(s) 2518, 3486
Bsa29I ATCGAT 1 cut(s) 1270
BsaAI YACGTR 1 cut(s) 3017
BsaBI GATNNNNATC 1 cut(s) 965
BsaHI GRCGYC 2 cut(s) 605, 673
BsaI GGTCTC 1 cut(s) 1372
BsaJI CCNNGG 7 cut(s) 676, 682, 731, 1125, 1137, 1276, 2977
Bsc4I CCNNNNNNNGG 8 cut(s) 419, 635, 636, 688, 854, 1993, 2179, 2428
Bse118I RCCGGY 1 cut(s) 3477
Bse1I ACTGG 3 cut(s) 1114, 1530, 3133
Bse3DI GCAATG 5 cut(s) 459, 712, 1289, 2346, 3223
Bse8I GATNNNNATC 1 cut(s) 965
BseBI CCWGG 4 cut(s) 26, 677, 1126, 2478
BseCI ATCGAT 1 cut(s) 1270
BseDI CCNNGG 7 cut(s) 676, 682, 731, 1125, 1137, 1276, 2977
BseGI GGATG 8 cut(s) 1024, 1526, 1883, 2064, 2188, 2689, 3129, 3481
BseJI GATNNNNATC 1 cut(s) 965
BseLI CCNNNNNNNGG 8 cut(s) 419, 635, 636, 688, 854, 1993, 2179, 2428
BseMI GCAATG 5 cut(s) 459, 712, 1289, 2346, 3223
BseMII CTCAG 6 cut(s) 1727, 2366, 2687, 2865, 3131, 3588
BseNI ACTGG 3 cut(s) 1114, 1530, 3133
BseRI GAGGAG 3 cut(s) 953, 1316, 2536
BseSI GKGCMC 1 cut(s) 2829
BseYI CCCAGC 1 cut(s) 835
BsgI GTGCAG 1 cut(s) 1413
Bsh1236I CGCG 2 cut(s) 1813, 2281
BshFI GGCC 4 cut(s) 681, 840, 2566, 3115
BshNI GGYRCC 2 cut(s) 672, 3192
BshVI ATCGAT 1 cut(s) 1270
BsiHKAI GWGCWC 3 cut(s) 1375, 1600, 3534
BsiHKCI CYCGRG 1 cut(s) 3153
BsiSI CCGG 3 cut(s) 2517, 3478, 3486
BslFI GGGAC 4 cut(s) 215, 395, 653, 705
BslI CCNNNNNNNGG 8 cut(s) 419, 635, 636, 688, 854, 1993, 2179, 2428
BsmAI GTCTC 7 cut(s) 10, 70, 935, 1372, 1897, 2757, 3505
BsmFI GGGAC 4 cut(s) 215, 395, 653, 705
BsmI GAATGC 2 cut(s) 761, 937
BsnI GGCC 4 cut(s) 681, 840, 2566, 3115
Bso31I GGTCTC 1 cut(s) 1372
BsoBI CYCGRG 1 cut(s) 3153
Bsp1286I GDGCHC 4 cut(s) 1375, 1600, 2829, 3534
Bsp1407I TGTACA 1 cut(s) 3505
Bsp19I CCATGG 1 cut(s) 1276
BspACI CCGC 7 cut(s) 123, 538, 1254, 1813, 3445, 3568, 3683
BspANI GGCC 4 cut(s) 681, 840, 2566, 3115
BspCNI CTCAG 6 cut(s) 1726, 2365, 2688, 2866, 3130, 3587
BspDI ATCGAT 1 cut(s) 1270
BspFNI CGCG 2 cut(s) 1813, 2281
BspHI TCATGA 2 cut(s) 747, 2583
BspLI GGNNCC 6 cut(s) 249, 411, 674, 3194, 3291, 3417
BspMAI CTGCAG 1 cut(s) 1222
BspMI ACCTGC 1 cut(s) 1336
BspPI GGATC 4 cut(s) 620, 1934, 2094, 3155
BspQI GCTCTTC 2 cut(s) 484, 2066
BspT107I GGYRCC 2 cut(s) 672, 3192
BspTI CTTAAG 1 cut(s) 1897
BspTNI GGTCTC 1 cut(s) 1372
BsrDI GCAATG 5 cut(s) 459, 712, 1289, 2346, 3223
BsrFI RCCGGY 1 cut(s) 3477
BsrGI TGTACA 1 cut(s) 3505
BsrI ACTGG 3 cut(s) 1114, 1530, 3133
BssAI RCCGGY 1 cut(s) 3477
BssECI CCNNGG 7 cut(s) 676, 682, 731, 1125, 1137, 1276, 2977
BssNAI GTATAC 1 cut(s) 2858
BssNI GRCGYC 2 cut(s) 605, 673
BssSI CACGAG 1 cut(s) 2828
BssT1I CCWWGG 4 cut(s) 682, 1137, 1276, 2977
Bst1107I GTATAC 1 cut(s) 2858
Bst2BI CACGAG 1 cut(s) 2828
Bst2UI CCWGG 4 cut(s) 26, 677, 1126, 2478
Bst4CI ACNGT 6 cut(s) 58, 732, 1439, 2098, 2741, 3235
Bst6I CTCTTC 5 cut(s) 484, 652, 2066, 2466, 2913
BstACI GRCGYC 2 cut(s) 605, 673
BstAFI CTTAAG 1 cut(s) 1897
BstAPI GCANNNNNTGC 2 cut(s) 1351, 2417
BstAUI TGTACA 1 cut(s) 3505
BstBAI YACGTR 1 cut(s) 3017
BstC8I GCNNGC 5 cut(s) 831, 842, 2252, 2509, 3351
BstDSI CCRYGG 2 cut(s) 731, 1276
BstF5I GGATG 8 cut(s) 1024, 1526, 1883, 2064, 2188, 2689, 3129, 3481
BstFNI CGCG 2 cut(s) 1813, 2281
BstH2I RGCGCY 3 cut(s) 100, 676, 836
BstHHI GCGC 6 cut(s) 99, 495, 675, 835, 1737, 1813
BstMAI GTCTC 7 cut(s) 10, 70, 935, 1372, 1897, 2757, 3505
BstNI CCWGG 4 cut(s) 26, 677, 1126, 2478
BstNSI RCATGY 6 cut(s) 649, 1358, 1781, 1928, 3353, 3365
BstSCI CCNGG 6 cut(s) 24, 675, 1124, 2476, 2516, 3484
BstSFI CTRYAG 2 cut(s) 1086, 1218
BstSLI GKGCMC 1 cut(s) 2829
BstUI CGCG 2 cut(s) 1813, 2281
BstV2I GAAGAC 2 cut(s) 1149, 1368
BstX2I RGATCY 2 cut(s) 1424, 3160
BstXI CCANNNNNNTGG 1 cut(s) 683
BstYI RGATCY 2 cut(s) 1424, 3160
BstZ17I GTATAC 1 cut(s) 2858
Bsu15I ATCGAT 1 cut(s) 1270
BsuRI GGCC 4 cut(s) 681, 840, 2566, 3115
BsuTUI ATCGAT 1 cut(s) 1270
BtgI CCRYGG 2 cut(s) 731, 1276
BtsCI GGATG 8 cut(s) 1024, 1526, 1883, 2064, 2188, 2689, 3129, 3481
BtsI GCAGTG 1 cut(s) 2941
BtsIMutI CAGTG 7 cut(s) 54, 615, 1042, 1537, 2693, 2746, 2941
BveI ACCTGC 1 cut(s) 1336
Cac8I GCNNGC 5 cut(s) 831, 842, 2252, 2509, 3351
CciI TCATGA 2 cut(s) 747, 2583
CfoI GCGC 6 cut(s) 99, 495, 675, 835, 1737, 1813
Cfr10I RCCGGY 1 cut(s) 3477
Cfr13I GGNCC 4 cut(s) 28, 679, 838, 2564
ClaI ATCGAT 1 cut(s) 1270
CseI GACGC 1 cut(s) 594
Csp6I GTAC 8 cut(s) 33, 914, 1022, 1281, 2210, 3193, 3245, 3506
CspCI CAANNNNNGTGG 4 cut(s) 717, 752, 2682, 2717
CviQI GTAC 8 cut(s) 33, 914, 1022, 1281, 2210, 3193, 3245, 3506
DinI GGCGCC 1 cut(s) 674
DraI TTTAAA 1 cut(s) 1105
DriI GACNNNNNGTC 1 cut(s) 370
Eam1104I CTCTTC 5 cut(s) 484, 652, 2066, 2466, 2913
Eam1105I GACNNNNNGTC 1 cut(s) 370
EarI CTCTTC 5 cut(s) 484, 652, 2066, 2466, 2913
Ecl136II GAGCTC 1 cut(s) 3532
Eco130I CCWWGG 4 cut(s) 682, 1137, 1276, 2977
Eco24I GRGCYC 1 cut(s) 3534
Eco31I GGTCTC 1 cut(s) 1372
Eco47I GGWCC 1 cut(s) 28
Eco47III AGCGCT 1 cut(s) 834
Eco53kI GAGCTC 1 cut(s) 3532
Eco57I CTGAAG 1 cut(s) 2276
Eco88I CYCGRG 1 cut(s) 3153
EcoICRI GAGCTC 1 cut(s) 3532
EcoO109I RGGNCCY 2 cut(s) 679, 2564
EcoRII CCWGG 4 cut(s) 24, 675, 1124, 2476
EcoT14I CCWWGG 4 cut(s) 682, 1137, 1276, 2977
EcoT38I GRGCYC 1 cut(s) 3534
EgeI GGCGCC 1 cut(s) 674
EheI GGCGCC 1 cut(s) 674
ErhI CCWWGG 4 cut(s) 682, 1137, 1276, 2977
FaqI GGGAC 4 cut(s) 215, 395, 653, 705
FauI CCCGC 2 cut(s) 130, 3452
FbaI TGATCA 3 cut(s) 277, 2572, 3660
FblI GTMKAC 2 cut(s) 2316, 2857
FokI GGATG 8 cut(s) 1031, 1513, 1890, 2051, 2195, 2676, 3116, 3468
FriOI GRGCYC 1 cut(s) 3534
FspBI CTAG 6 cut(s) 38, 221, 1746, 2052, 2490, 3207
GlaI GCGC 6 cut(s) 98, 494, 674, 834, 1736, 1812
GsaI CCCAGC 1 cut(s) 839
GsuI CTGGAG 2 cut(s) 504, 3402
HaeII RGCGCY 3 cut(s) 100, 676, 836
HaeIII GGCC 4 cut(s) 681, 840, 2566, 3115
HapII CCGG 3 cut(s) 2517, 3478, 3486
HgaI GACGC 1 cut(s) 594
HhaI GCGC 6 cut(s) 99, 495, 675, 835, 1737, 1813
Hin1I GRCGYC 2 cut(s) 605, 673
Hin6I GCGC 6 cut(s) 97, 493, 673, 833, 1735, 1811
HinP1I GCGC 6 cut(s) 97, 493, 673, 833, 1735, 1811
HincII GTYRAC 2 cut(s) 73, 3238
HindII GTYRAC 2 cut(s) 73, 3238
HindIII AAGCTT 5 cut(s) 288, 313, 2252, 2393, 3001
HpaII CCGG 3 cut(s) 2517, 3478, 3486
HphI GGTGA 4 cut(s) 137, 310, 1715, 2113
Hpy99I CGWCG 1 cut(s) 1914
HpyCH4III ACNGT 6 cut(s) 58, 732, 1439, 2098, 2741, 3235
HpyCH4IV ACGT 4 cut(s) 916, 2987, 3016, 3375
HpySE526I ACGT 4 cut(s) 916, 2987, 3016, 3375
Hsp92I GRCGYC 2 cut(s) 605, 673
HspAI GCGC 6 cut(s) 97, 493, 673, 833, 1735, 1811
KasI GGCGCC 1 cut(s) 672
KpnI GGTACC 1 cut(s) 3196
Ksp22I TGATCA 3 cut(s) 277, 2572, 3660
LguI GCTCTTC 2 cut(s) 484, 2066
LmnI GCTCC 8 cut(s) 247, 409, 485, 826, 1868, 2308, 3421, 3529
LweI GCATC 7 cut(s) 348, 1262, 1324, 2626, 3365, 3490, 3670
MaeI CTAG 6 cut(s) 38, 221, 1746, 2052, 2490, 3207
MaeII ACGT 4 cut(s) 916, 2987, 3016, 3375
MaeIII GTNAC 6 cut(s) 1169, 2342, 2455, 2995, 3172, 3267
MfeI CAATTG 2 cut(s) 973, 2616
MflI RGATCY 2 cut(s) 1424, 3160
MhlI GDGCHC 4 cut(s) 1375, 1600, 2829, 3534
MluI ACGCGT 1 cut(s) 2279
Mly113I GGCGCC 1 cut(s) 673
MlyI GAGTC 5 cut(s) 1166, 1484, 2312, 3275, 3656
MmeI TCCRAC 5 cut(s) 22, 507, 1637, 2422, 3150
MroXI GAANNNNTTC 3 cut(s) 2289, 2720, 3462
MseI TTAA 9 cut(s) 204, 668, 767, 1104, 1682, 1898, 2757, 3536, 3666
MslI CAYNNNNRTG 5 cut(s) 721, 1876, 1929, 2451, 2634
MspA1I CMGCKG 1 cut(s) 3570
MspCI CTTAAG 1 cut(s) 1897
MspI CCGG 3 cut(s) 2517, 3478, 3486
MspR9I CCNGG 6 cut(s) 26, 677, 1126, 2478, 2518, 3486
MunI CAATTG 2 cut(s) 973, 2616
Mva1269I GAATGC 2 cut(s) 761, 937
MvaI CCWGG 4 cut(s) 26, 677, 1126, 2478
MvnI CGCG 2 cut(s) 1813, 2281
NarI GGCGCC 1 cut(s) 673
NciI CCSGG 2 cut(s) 2518, 3486
NcoI CCATGG 1 cut(s) 1276
NlaIV GGNNCC 6 cut(s) 249, 411, 674, 3194, 3291, 3417
NmuCI GTSAC 3 cut(s) 1169, 2995, 3267
NspI RCATGY 6 cut(s) 649, 1358, 1781, 1928, 3353, 3365
PaeI GCATGC 1 cut(s) 3353
PagI TCATGA 2 cut(s) 747, 2583
PciI ACATGT 2 cut(s) 1924, 3361
PciSI GCTCTTC 2 cut(s) 484, 2066
PctI GAATGC 2 cut(s) 761, 937
PdmI GAANNNNTTC 3 cut(s) 2289, 2720, 3462
PflMI CCANNNNNTGG 1 cut(s) 1993
PfoI TCCNGGA 1 cut(s) 3484
PleI GAGTC 5 cut(s) 1166, 1483, 2312, 3274, 3655
PluTI GGCGCC 1 cut(s) 676
PpsI GAGTC 5 cut(s) 1166, 1483, 2312, 3274, 3655
Ppu21I YACGTR 1 cut(s) 3017
PscI ACATGT 2 cut(s) 1924, 3361
PsiI TTATAA 1 cut(s) 1863
Psp124BI GAGCTC 1 cut(s) 3534
Psp1406I AACGTT 1 cut(s) 3375
Psp6I CCWGG 4 cut(s) 24, 675, 1124, 2476
PspFI CCCAGC 1 cut(s) 835
PspGI CCWGG 4 cut(s) 24, 675, 1124, 2476
PspN4I GGNNCC 6 cut(s) 249, 411, 674, 3194, 3291, 3417
PspPI GGNCC 4 cut(s) 28, 679, 838, 2564
PstI CTGCAG 1 cut(s) 1222
PsuI RGATCY 2 cut(s) 1424, 3160
RsaI GTAC 8 cut(s) 34, 915, 1023, 1282, 2211, 3194, 3246, 3507
RsaNI GTAC 8 cut(s) 33, 914, 1022, 1281, 2210, 3193, 3245, 3506
RseI CAYNNNNRTG 5 cut(s) 721, 1876, 1929, 2451, 2634
SacI GAGCTC 1 cut(s) 3534
SapI GCTCTTC 2 cut(s) 484, 2066
SaqAI TTAA 9 cut(s) 204, 668, 767, 1104, 1682, 1898, 2757, 3536, 3666
Sau96I GGNCC 4 cut(s) 28, 679, 838, 2564
SchI GAGTC 5 cut(s) 1166, 1484, 2312, 3275, 3656
ScrFI CCNGG 6 cut(s) 26, 677, 1126, 2478, 2518, 3486
SduI GDGCHC 4 cut(s) 1375, 1600, 2829, 3534
SfaNI GCATC 7 cut(s) 348, 1262, 1324, 2626, 3365, 3490, 3670
SfcI CTRYAG 2 cut(s) 1086, 1218
SfoI GGCGCC 1 cut(s) 674
SinI GGWCC 1 cut(s) 28
SmiMI CAYNNNNRTG 5 cut(s) 721, 1876, 1929, 2451, 2634
SmlI CTYRAG 4 cut(s) 104, 1629, 1897, 3139
SmoI CTYRAG 4 cut(s) 104, 1629, 1897, 3139
SpeI ACTAGT 1 cut(s) 37
SphI GCATGC 1 cut(s) 3353
SsiI CCGC 7 cut(s) 123, 538, 1254, 1813, 3445, 3568, 3683
SspDI GGCGCC 1 cut(s) 672
SspI AATATT 4 cut(s) 1828, 2119, 2579, 3257
SspMI CTAG 6 cut(s) 38, 221, 1746, 2052, 2490, 3207
SstI GAGCTC 1 cut(s) 3534
StyD4I CCNGG 6 cut(s) 24, 675, 1124, 2476, 2516, 3484
StyI CCWWGG 4 cut(s) 682, 1137, 1276, 2977
TaaI ACNGT 6 cut(s) 58, 732, 1439, 2098, 2741, 3235
TaiI ACGT 4 cut(s) 919, 2990, 3019, 3378
TaqI TCGA 2 cut(s) 1270, 1909
TaqII GACCGA 1 cut(s) 1254
TatI WGTACW 2 cut(s) 3244, 3505
TauI GCSGC 2 cut(s) 1256, 3570
Tru1I TTAA 9 cut(s) 204, 668, 767, 1104, 1682, 1898, 2757, 3536, 3666
Tru9I TTAA 9 cut(s) 204, 668, 767, 1104, 1682, 1898, 2757, 3536, 3666
TscAI CASTG 7 cut(s) 61, 615, 1042, 1537, 2700, 2746, 2941
TseFI GTSAC 3 cut(s) 1169, 2995, 3267
Tsp45I GTSAC 3 cut(s) 1169, 2995, 3267
TspGWI ACGGA 3 cut(s) 20, 58, 461
TspRI CASTG 7 cut(s) 61, 615, 1042, 1537, 2700, 2746, 2941
Van91I CCANNNNNTGG 1 cut(s) 1993
Vha464I CTTAAG 1 cut(s) 1897
VpaK11BI GGWCC 1 cut(s) 28
XapI RAATTY 3 cut(s) 215, 851, 2286
XbaI TCTAGA 2 cut(s) 1745, 3206
XceI RCATGY 6 cut(s) 649, 1358, 1781, 1928, 3353, 3365
XcmI CCANNNNNNNNNTGG 1 cut(s) 2119
XmiI GTMKAC 2 cut(s) 2316, 2857
XmnI GAANNNNTTC 3 cut(s) 2289, 2720, 3462
XspI CTAG 6 cut(s) 38, 221, 1746, 2052, 2490, 3207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.