ATP-dependent helicase hrq1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G08110 AT5G08110 AT5G08110 |
| fragaria_vesca | FvH4_5g13410 FvH4_5g13410 |
| malus_domestica | MD14G1216300.v1.1 |
| prunus_persica | Prupe.5G209300_v2.0.a1 Prupe.5G209800_v2.0.a1 Prupe.5G209800_v2.0.a1 Prupe.5G209800_v2.0.a1 Prupe.5G209800_v2.0.a1 Prupe.5G209800_v2.0.a1 Prupe.5G209800_v2.0.a1 Prupe.5G209800_v2.0.a1 |
| pyrus_communis | pycom14g17910 |
| rosa_chinensis | RchiOBHm_Chr7g0183711 |
| rosa_laevigata | RLG00000005031 |
| rosa_multiflora | Rmu_sc0003610.1_g000027 |
| rosa_roxburghii | Rroxscaffold_3G00270310 |
| rosa_rugosa | Rorug06G0459500 Rorug06G0459500 |
| rosa_samantha | Rh7AG060200 Rh7BG060400 Rh7CG062000 Rh7DG060300 |
| rosa_wichuraiana | Rw7G005000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 787 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 990 |
| Acc36I | ACCTGC | 1 cut(s) | 787 |
| Acc65I | GGTACC | 1 cut(s) | 3774 |
| AccB1I | GGYRCC | 2 cut(s) | 683, 3774 |
| AccI | GTMKAC | 4 cut(s) | 72, 2026, 2126, 2245 |
| AccII | CGCG | 1 cut(s) | 2305 |
| AccIII | TCCGGA | 1 cut(s) | 3259 |
| AciI | CCGC | 8 cut(s) | 5, 123, 462, 667, 1608, 1831, 2325, 2339 |
| AclWI | GGATC | 8 cut(s) | 16, 1360, 1659, 1952, 2214, 2801, 3664, 3721 |
| AcoI | YGGCCR | 1 cut(s) | 51 |
| AcsI | RAATTY | 2 cut(s) | 574, 848 |
| AcvI | CACGTG | 2 cut(s) | 1232, 1421 |
| AdeI | CACNNNGTG | 1 cut(s) | 3388 |
| AfaI | GTAC | 6 cut(s) | 912, 2235, 3234, 3516, 3612, 3776 |
| AfeI | AGCGCT | 1 cut(s) | 2648 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 37, 416, 1318, 2203, 2452 |
| AflII | CTTAAG | 1 cut(s) | 3674 |
| AflIII | ACRYGT | 5 cut(s) | 1229, 1873, 1942, 2303, 3382 |
| AjnI | CCWGG | 3 cut(s) | 24, 2500, 3015 |
| Alw21I | GWGCWC | 4 cut(s) | 1393, 1618, 3543, 3629 |
| Alw26I | GTCTC | 7 cut(s) | 257, 596, 1127, 2315, 2548, 3514, 3650 |
| Alw44I | GTGCAC | 1 cut(s) | 3625 |
| AlwI | GGATC | 8 cut(s) | 16, 1360, 1659, 1952, 2214, 2801, 3664, 3721 |
| Ama87I | CYCGRG | 2 cut(s) | 633, 3719 |
| Aor13HI | TCCGGA | 1 cut(s) | 3259 |
| Aor51HI | AGCGCT | 1 cut(s) | 2648 |
| AoxI | GGCC | 5 cut(s) | 10, 51, 88, 407, 2588 |
| ApaI | GGGCCC | 1 cut(s) | 2592 |
| ApaLI | GTGCAC | 1 cut(s) | 3625 |
| ApoI | RAATTY | 2 cut(s) | 574, 848 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1005, 3169, 3471 |
| Asp718I | GGTACC | 1 cut(s) | 3774 |
| AspLEI | GCGC | 2 cut(s) | 37, 2649 |
| AspS9I | GGNCC | 6 cut(s) | 28, 64, 407, 1187, 2588, 2589 |
| AsuC2I | CCSGG | 4 cut(s) | 68, 210, 634, 635 |
| AsuHPI | GGTGA | 9 cut(s) | 137, 173, 224, 619, 811, 1733, 3751, 3780, 3786 |
| AvaI | CYCGRG | 2 cut(s) | 633, 3719 |
| AvaII | GGWCC | 3 cut(s) | 28, 64, 1187 |
| AxyI | CCTNAGG | 3 cut(s) | 903, 1731, 3141 |
| BaeGI | GKGCMC | 2 cut(s) | 2592, 3629 |
| BanI | GGYRCC | 2 cut(s) | 683, 3774 |
| BanII | GRGCYC | 2 cut(s) | 2592, 3543 |
| BauI | CACGAG | 1 cut(s) | 3227 |
| BbrPI | CACGTG | 2 cut(s) | 1232, 1421 |
| BbsI | GAAGAC | 4 cut(s) | 366, 1164, 1386, 1927 |
| Bbv12I | GWGCWC | 4 cut(s) | 1393, 1618, 3543, 3629 |
| BccI | CCATC | 7 cut(s) | 89, 349, 2048, 2197, 2818, 3186, 3793 |
| BceAI | ACGGC | 2 cut(s) | 103, 3645 |
| BciT130I | CCWGG | 3 cut(s) | 26, 2502, 3017 |
| BciVI | GTATCC | 1 cut(s) | 3194 |
| BclI | TGATCA | 2 cut(s) | 2002, 2596 |
| BcnI | CCSGG | 4 cut(s) | 68, 210, 634, 635 |
| BcoDI | GTCTC | 7 cut(s) | 257, 596, 1127, 2315, 2548, 3514, 3650 |
| BfmI | CTRYAG | 2 cut(s) | 176, 1101 |
| BfoI | RGCGCY | 1 cut(s) | 2650 |
| BfrI | CTTAAG | 1 cut(s) | 3674 |
| BfuAI | ACCTGC | 1 cut(s) | 787 |
| BfuI | GTATCC | 1 cut(s) | 3194 |
| BglII | AGATCT | 2 cut(s) | 1003, 1442 |
| Bme1390I | CCNGG | 7 cut(s) | 26, 68, 210, 634, 635, 2502, 3017 |
| Bme18I | GGWCC | 3 cut(s) | 28, 64, 1187 |
| BmeT110I | CYCGRG | 2 cut(s) | 633, 3719 |
| BmgT120I | GGNCC | 6 cut(s) | 28, 64, 407, 1187, 2588, 2589 |
| BmiI | GGNNCC | 8 cut(s) | 66, 408, 685, 2590, 2591, 3294, 3426, 3776 |
| BmrFI | CCNGG | 7 cut(s) | 26, 68, 210, 634, 635, 2502, 3017 |
| BmsI | GCATC | 5 cut(s) | 892, 2467, 2650, 2889, 3499 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3506 |
| BpiI | GAAGAC | 4 cut(s) | 366, 1164, 1386, 1927 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2545, 2577 |
| BpmI | CTGGAG | 2 cut(s) | 2339, 3411 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1647 |
| BpuEI | CTTGAG | 3 cut(s) | 77, 89, 3568 |
| BpuMI | CCSGG | 4 cut(s) | 68, 210, 634, 635 |
| Bsa29I | ATCGAT | 1 cut(s) | 1288 |
| BsaAI | YACGTR | 3 cut(s) | 1232, 1421, 3036 |
| BsaBI | GATNNNNATC | 1 cut(s) | 20 |
| BsaI | GGTCTC | 2 cut(s) | 257, 2315 |
| BsaJI | CCNNGG | 5 cut(s) | 54, 633, 1140, 1152, 3001 |
| BsaWI | WCCGGW | 2 cut(s) | 686, 3259 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 815, 845 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 37, 416, 1318, 2203, 2452 |
| Bse118I | RCCGGY | 3 cut(s) | 49, 1576, 1929 |
| Bse1I | ACTGG | 4 cut(s) | 1129, 1465, 3296, 3508 |
| Bse21I | CCTNAGG | 3 cut(s) | 903, 1731, 3141 |
| Bse3DI | GCAATG | 4 cut(s) | 2005, 2253, 2370, 3775 |
| Bse8I | GATNNNNATC | 1 cut(s) | 20 |
| BseAI | TCCGGA | 1 cut(s) | 3259 |
| BseBI | CCWGG | 3 cut(s) | 26, 2502, 3017 |
| BseCI | ATCGAT | 1 cut(s) | 1288 |
| BseDI | CCNNGG | 5 cut(s) | 54, 633, 1140, 1152, 3001 |
| BseGI | GGATG | 4 cut(s) | 1604, 2880, 3133, 3808 |
| BseJI | GATNNNNATC | 1 cut(s) | 20 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 37, 416, 1318, 2203, 2452 |
| BseMI | GCAATG | 4 cut(s) | 2005, 2253, 2370, 3775 |
| BseMII | CTCAG | 6 cut(s) | 1661, 1745, 1861, 2711, 2820, 2889 |
| BseNI | ACTGG | 4 cut(s) | 1129, 1465, 3296, 3508 |
| BseRI | GAGGAG | 3 cut(s) | 1334, 1751, 2966 |
| BseSI | GKGCMC | 2 cut(s) | 2592, 3629 |
| BsgI | GTGCAG | 2 cut(s) | 1254, 1431 |
| Bsh1236I | CGCG | 1 cut(s) | 2305 |
| Bsh1285I | CGRYCG | 1 cut(s) | 72 |
| BshFI | GGCC | 5 cut(s) | 12, 53, 90, 409, 2590 |
| BshNI | GGYRCC | 2 cut(s) | 683, 3774 |
| BshVI | ATCGAT | 1 cut(s) | 1288 |
| BsiEI | CGRYCG | 1 cut(s) | 72 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1393, 1618, 3543, 3629 |
| BsiHKCI | CYCGRG | 2 cut(s) | 633, 3719 |
| BsiSI | CCGG | 8 cut(s) | 50, 68, 209, 634, 687, 1577, 1930, 3260 |
| BslFI | GGGAC | 5 cut(s) | 50, 650, 1359, 1579, 3514 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 37, 416, 1318, 2203, 2452 |
| BsmAI | GTCTC | 7 cut(s) | 257, 596, 1127, 2315, 2548, 3514, 3650 |
| BsmBI | CGTCTC | 1 cut(s) | 596 |
| BsmFI | GGGAC | 5 cut(s) | 50, 650, 1359, 1579, 3514 |
| BsmI | GAATGC | 1 cut(s) | 934 |
| BsnI | GGCC | 5 cut(s) | 12, 53, 90, 409, 2590 |
| Bso31I | GGTCTC | 2 cut(s) | 257, 2315 |
| BsoBI | CYCGRG | 2 cut(s) | 633, 3719 |
| Bsp120I | GGGCCC | 1 cut(s) | 2588 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1393, 1618, 2592, 3543, 3629 |
| Bsp13I | TCCGGA | 1 cut(s) | 3259 |
| Bsp1407I | TGTACA | 2 cut(s) | 3514, 3610 |
| Bsp19I | CCATGG | 1 cut(s) | 1140 |
| BspACI | CCGC | 8 cut(s) | 5, 123, 462, 667, 1608, 1831, 2325, 2339 |
| BspANI | GGCC | 5 cut(s) | 12, 53, 90, 409, 2590 |
| BspCNI | CTCAG | 6 cut(s) | 1660, 1744, 1860, 2712, 2821, 2890 |
| BspDI | ATCGAT | 1 cut(s) | 1288 |
| BspEI | TCCGGA | 1 cut(s) | 3259 |
| BspFNI | CGCG | 1 cut(s) | 2305 |
| BspHI | TCATGA | 3 cut(s) | 744, 1999, 2607 |
| BspLI | GGNNCC | 8 cut(s) | 66, 408, 685, 2590, 2591, 3294, 3426, 3776 |
| BspMAI | CTGCAG | 1 cut(s) | 180 |
| BspMI | ACCTGC | 1 cut(s) | 787 |
| BspPI | GGATC | 8 cut(s) | 16, 1360, 1659, 1952, 2214, 2801, 3664, 3721 |
| BspQI | GCTCTTC | 1 cut(s) | 649 |
| BspT107I | GGYRCC | 2 cut(s) | 683, 3774 |
| BspTI | CTTAAG | 1 cut(s) | 3674 |
| BspTNI | GGTCTC | 2 cut(s) | 257, 2315 |
| BsrDI | GCAATG | 4 cut(s) | 2005, 2253, 2370, 3775 |
| BsrFI | RCCGGY | 3 cut(s) | 49, 1576, 1929 |
| BsrGI | TGTACA | 2 cut(s) | 3514, 3610 |
| BsrI | ACTGG | 4 cut(s) | 1129, 1465, 3296, 3508 |
| BssAI | RCCGGY | 3 cut(s) | 49, 1576, 1929 |
| BssECI | CCNNGG | 5 cut(s) | 54, 633, 1140, 1152, 3001 |
| BssSI | CACGAG | 1 cut(s) | 3227 |
| BssT1I | CCWWGG | 3 cut(s) | 1140, 1152, 3001 |
| Bst2BI | CACGAG | 1 cut(s) | 3227 |
| Bst2UI | CCWGG | 3 cut(s) | 26, 2502, 3017 |
| Bst4CI | ACNGT | 7 cut(s) | 58, 607, 1601, 1721, 2765, 3608, 3792 |
| Bst6I | CTCTTC | 4 cut(s) | 649, 2225, 2490, 2937 |
| BstAFI | CTTAAG | 1 cut(s) | 3674 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 832, 2441, 3371 |
| BstAUI | TGTACA | 2 cut(s) | 3514, 3610 |
| BstBAI | YACGTR | 3 cut(s) | 1232, 1421, 3036 |
| BstC8I | GCNNGC | 9 cut(s) | 228, 828, 1021, 1025, 1931, 2276, 2533, 3360, 3625 |
| BstDSI | CCRYGG | 2 cut(s) | 54, 1140 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 414 |
| BstF5I | GGATG | 4 cut(s) | 1604, 2880, 3133, 3808 |
| BstFNI | CGCG | 1 cut(s) | 2305 |
| BstH2I | RGCGCY | 1 cut(s) | 2650 |
| BstHHI | GCGC | 2 cut(s) | 37, 2649 |
| BstMAI | GTCTC | 7 cut(s) | 257, 596, 1127, 2315, 2548, 3514, 3650 |
| BstMCI | CGRYCG | 1 cut(s) | 72 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 832, 1397, 1935, 1988, 2271, 2441, 2537, 3371, 3629 |
| BstNI | CCWGG | 3 cut(s) | 26, 2502, 3017 |
| BstNSI | RCATGY | 6 cut(s) | 1376, 1799, 1877, 1946, 3362, 3374 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3506 |
| BstSCI | CCNGG | 7 cut(s) | 24, 66, 208, 632, 633, 2500, 3015 |
| BstSFI | CTRYAG | 2 cut(s) | 176, 1101 |
| BstSLI | GKGCMC | 2 cut(s) | 2592, 3629 |
| BstUI | CGCG | 1 cut(s) | 2305 |
| BstV2I | GAAGAC | 4 cut(s) | 366, 1164, 1386, 1927 |
| BstX2I | RGATCY | 5 cut(s) | 21, 1003, 1442, 2206, 3713 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3494 |
| BstYI | RGATCY | 5 cut(s) | 21, 1003, 1442, 2206, 3713 |
| Bsu15I | ATCGAT | 1 cut(s) | 1288 |
| Bsu36I | CCTNAGG | 3 cut(s) | 903, 1731, 3141 |
| BsuI | GTATCC | 1 cut(s) | 3194 |
| BsuRI | GGCC | 5 cut(s) | 12, 53, 90, 409, 2590 |
| BsuTUI | ATCGAT | 1 cut(s) | 1288 |
| BtgI | CCRYGG | 2 cut(s) | 54, 1140 |
| BtsCI | GGATG | 4 cut(s) | 1604, 2880, 3133, 3808 |
| BtsI | GCAGTG | 3 cut(s) | 2574, 3291, 3327 |
| BtsIMutI | CAGTG | 6 cut(s) | 1179, 1458, 2574, 2770, 3291, 3327 |
| BveI | ACCTGC | 1 cut(s) | 787 |
| Cac8I | GCNNGC | 9 cut(s) | 228, 828, 1021, 1025, 1931, 2276, 2533, 3360, 3625 |
| CciI | TCATGA | 3 cut(s) | 744, 1999, 2607 |
| CfoI | GCGC | 2 cut(s) | 37, 2649 |
| Cfr10I | RCCGGY | 3 cut(s) | 49, 1576, 1929 |
| Cfr13I | GGNCC | 6 cut(s) | 28, 64, 407, 1187, 2588, 2589 |
| Cfr9I | CCCGGG | 1 cut(s) | 633 |
| ClaI | ATCGAT | 1 cut(s) | 1288 |
| CseI | GACGC | 1 cut(s) | 1742 |
| CsiI | ACCWGGT | 1 cut(s) | 3015 |
| Csp6I | GTAC | 6 cut(s) | 911, 2234, 3233, 3515, 3611, 3775 |
| CviQI | GTAC | 6 cut(s) | 911, 2234, 3233, 3515, 3611, 3775 |
| DraI | TTTAAA | 2 cut(s) | 580, 1120 |
| DraIII | CACNNNGTG | 1 cut(s) | 3388 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 990 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 990 |
| EaeI | YGGCCR | 1 cut(s) | 51 |
| Eam1104I | CTCTTC | 4 cut(s) | 649, 2225, 2490, 2937 |
| EarI | CTCTTC | 4 cut(s) | 649, 2225, 2490, 2937 |
| EciI | GGCGGA | 2 cut(s) | 20, 1846 |
| Ecl136II | GAGCTC | 1 cut(s) | 3541 |
| Eco130I | CCWWGG | 3 cut(s) | 1140, 1152, 3001 |
| Eco147I | AGGCCT | 1 cut(s) | 12 |
| Eco24I | GRGCYC | 2 cut(s) | 2592, 3543 |
| Eco31I | GGTCTC | 2 cut(s) | 257, 2315 |
| Eco47I | GGWCC | 3 cut(s) | 28, 64, 1187 |
| Eco47III | AGCGCT | 1 cut(s) | 2648 |
| Eco53kI | GAGCTC | 1 cut(s) | 3541 |
| Eco72I | CACGTG | 2 cut(s) | 1232, 1421 |
| Eco81I | CCTNAGG | 3 cut(s) | 903, 1731, 3141 |
| Eco88I | CYCGRG | 2 cut(s) | 633, 3719 |
| EcoICRI | GAGCTC | 1 cut(s) | 3541 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 414 |
| EcoO109I | RGGNCCY | 3 cut(s) | 407, 2588, 2589 |
| EcoRII | CCWGG | 3 cut(s) | 24, 2500, 3015 |
| EcoT14I | CCWWGG | 3 cut(s) | 1140, 1152, 3001 |
| EcoT38I | GRGCYC | 2 cut(s) | 2592, 3543 |
| ErhI | CCWWGG | 3 cut(s) | 1140, 1152, 3001 |
| Esp3I | CGTCTC | 1 cut(s) | 596 |
| FaqI | GGGAC | 5 cut(s) | 50, 650, 1359, 1579, 3514 |
| FauI | CCCGC | 1 cut(s) | 130 |
| FauNDI | CATATG | 1 cut(s) | 3212 |
| FbaI | TGATCA | 2 cut(s) | 2002, 2596 |
| FblI | GTMKAC | 4 cut(s) | 72, 2026, 2126, 2245 |
| FokI | GGATG | 4 cut(s) | 1591, 2867, 3120, 3795 |
| FriOI | GRGCYC | 2 cut(s) | 2592, 3543 |
| GlaI | GCGC | 2 cut(s) | 36, 2648 |
| GsuI | CTGGAG | 2 cut(s) | 2339, 3411 |
| HaeII | RGCGCY | 1 cut(s) | 2650 |
| HaeIII | GGCC | 5 cut(s) | 12, 53, 90, 409, 2590 |
| HapII | CCGG | 8 cut(s) | 50, 68, 209, 634, 687, 1577, 1930, 3260 |
| HgaI | GACGC | 1 cut(s) | 1742 |
| HhaI | GCGC | 2 cut(s) | 37, 2649 |
| Hin6I | GCGC | 2 cut(s) | 35, 2647 |
| HinP1I | GCGC | 2 cut(s) | 35, 2647 |
| HincII | GTYRAC | 2 cut(s) | 73, 2127 |
| HindII | GTYRAC | 2 cut(s) | 73, 2127 |
| HindIII | AAGCTT | 5 cut(s) | 1272, 2075, 2276, 3025, 3048 |
| HpaII | CCGG | 8 cut(s) | 50, 68, 209, 634, 687, 1577, 1930, 3260 |
| HphI | GGTGA | 9 cut(s) | 137, 173, 224, 619, 811, 1733, 3751, 3780, 3786 |
| Hpy166II | GTNNAC | 8 cut(s) | 73, 1424, 2027, 2127, 2246, 2285, 3611, 3627 |
| Hpy8I | GTNNAC | 8 cut(s) | 73, 1424, 2027, 2127, 2246, 2285, 3611, 3627 |
| Hpy99I | CGWCG | 4 cut(s) | 77, 89, 2128, 2131 |
| HpyCH4III | ACNGT | 7 cut(s) | 58, 607, 1601, 1721, 2765, 3608, 3792 |
| HpyCH4IV | ACGT | 7 cut(s) | 1231, 1420, 2123, 2248, 2869, 3035, 3384 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 832, 1397, 1935, 1988, 2271, 2441, 2537, 3371, 3629 |
| HpySE526I | ACGT | 7 cut(s) | 1231, 1420, 2123, 2248, 2869, 3035, 3384 |
| HspAI | GCGC | 2 cut(s) | 35, 2647 |
| Kpn2I | TCCGGA | 1 cut(s) | 3259 |
| KpnI | GGTACC | 1 cut(s) | 3778 |
| KroI | GCCGGC | 1 cut(s) | 1929 |
| KroNI | GCCGGC | 1 cut(s) | 1931 |
| Ksp22I | TGATCA | 2 cut(s) | 2002, 2596 |
| LguI | GCTCTTC | 1 cut(s) | 649 |
| LmnI | GCTCC | 7 cut(s) | 102, 137, 482, 823, 1886, 3430, 3538 |
| LweI | GCATC | 5 cut(s) | 892, 2467, 2650, 2889, 3499 |
| MabI | ACCWGGT | 1 cut(s) | 3015 |
| MaeII | ACGT | 7 cut(s) | 1231, 1420, 2123, 2248, 2869, 3035, 3384 |
| MaeIII | GTNAC | 9 cut(s) | 1225, 1694, 1721, 2156, 2366, 3019, 3181, 3276, 3792 |
| MfeI | CAATTG | 3 cut(s) | 1690, 2640, 3663 |
| MflI | RGATCY | 5 cut(s) | 21, 1003, 1442, 2206, 3713 |
| MhlI | GDGCHC | 5 cut(s) | 1393, 1618, 2592, 3543, 3629 |
| MluI | ACGCGT | 1 cut(s) | 2303 |
| MlyI | GAGTC | 6 cut(s) | 190, 1502, 2336, 2809, 3284, 3731 |
| MmeI | TCCRAC | 3 cut(s) | 1336, 1655, 2446 |
| MroI | TCCGGA | 1 cut(s) | 3259 |
| MroNI | GCCGGC | 1 cut(s) | 1929 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1005, 3169, 3471 |
| MslI | CAYNNNNRTG | 4 cut(s) | 718, 1947, 2475, 2658 |
| MspA1I | CMGCKG | 1 cut(s) | 3579 |
| MspCI | CTTAAG | 1 cut(s) | 3674 |
| MspI | CCGG | 8 cut(s) | 50, 68, 209, 634, 687, 1577, 1930, 3260 |
| MspR9I | CCNGG | 7 cut(s) | 26, 68, 210, 634, 635, 2502, 3017 |
| MunI | CAATTG | 3 cut(s) | 1690, 2640, 3663 |
| Mva1269I | GAATGC | 1 cut(s) | 934 |
| MvaI | CCWGG | 3 cut(s) | 26, 2502, 3017 |
| MvnI | CGCG | 1 cut(s) | 2305 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 832, 1397, 1935, 1988, 2271, 2441, 2537, 3371, 3629 |
| NaeI | GCCGGC | 1 cut(s) | 1931 |
| NciI | CCSGG | 4 cut(s) | 68, 210, 634, 635 |
| NcoI | CCATGG | 1 cut(s) | 1140 |
| NdeI | CATATG | 1 cut(s) | 3212 |
| NgoMIV | GCCGGC | 1 cut(s) | 1929 |
| NlaIV | GGNNCC | 8 cut(s) | 66, 408, 685, 2590, 2591, 3294, 3426, 3776 |
| NmuCI | GTSAC | 5 cut(s) | 1694, 1721, 3019, 3276, 3792 |
| NspI | RCATGY | 6 cut(s) | 1376, 1799, 1877, 1946, 3362, 3374 |
| PaeI | GCATGC | 1 cut(s) | 3362 |
| PagI | TCATGA | 3 cut(s) | 744, 1999, 2607 |
| PaqCI | CACCTGC | 1 cut(s) | 787 |
| PceI | AGGCCT | 1 cut(s) | 12 |
| PciI | ACATGT | 2 cut(s) | 1873, 1942 |
| PciSI | GCTCTTC | 1 cut(s) | 649 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 81, 2819 |
| PctI | GAATGC | 1 cut(s) | 934 |
| PdiI | GCCGGC | 1 cut(s) | 1931 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1005, 3169, 3471 |
| PleI | GAGTC | 6 cut(s) | 189, 1501, 2336, 2808, 3283, 3730 |
| PmaCI | CACGTG | 2 cut(s) | 1232, 1421 |
| PmlI | CACGTG | 2 cut(s) | 1232, 1421 |
| PpsI | GAGTC | 6 cut(s) | 189, 1501, 2336, 2808, 3283, 3730 |
| Ppu21I | YACGTR | 3 cut(s) | 1232, 1421, 3036 |
| PscI | ACATGT | 2 cut(s) | 1873, 1942 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3506 |
| Psp124BI | GAGCTC | 1 cut(s) | 3543 |
| Psp6I | CCWGG | 3 cut(s) | 24, 2500, 3015 |
| PspCI | CACGTG | 2 cut(s) | 1232, 1421 |
| PspGI | CCWGG | 3 cut(s) | 24, 2500, 3015 |
| PspN4I | GGNNCC | 8 cut(s) | 66, 408, 685, 2590, 2591, 3294, 3426, 3776 |
| PspOMI | GGGCCC | 1 cut(s) | 2588 |
| PspPI | GGNCC | 6 cut(s) | 28, 64, 407, 1187, 2588, 2589 |
| PstI | CTGCAG | 1 cut(s) | 180 |
| PsuI | RGATCY | 5 cut(s) | 21, 1003, 1442, 2206, 3713 |
| PvuII | CAGCTG | 1 cut(s) | 3579 |
| RsaI | GTAC | 6 cut(s) | 912, 2235, 3234, 3516, 3612, 3776 |
| RsaNI | GTAC | 6 cut(s) | 911, 2234, 3233, 3515, 3611, 3775 |
| RseI | CAYNNNNRTG | 4 cut(s) | 718, 1947, 2475, 2658 |
| SacI | GAGCTC | 1 cut(s) | 3543 |
| SalI | GTCGAC | 2 cut(s) | 71, 2125 |
| SapI | GCTCTTC | 1 cut(s) | 649 |
| Sau96I | GGNCC | 6 cut(s) | 28, 64, 407, 1187, 2588, 2589 |
| SchI | GAGTC | 6 cut(s) | 190, 1502, 2336, 2809, 3284, 3731 |
| ScrFI | CCNGG | 7 cut(s) | 26, 68, 210, 634, 635, 2502, 3017 |
| SduI | GDGCHC | 5 cut(s) | 1393, 1618, 2592, 3543, 3629 |
| SexAI | ACCWGGT | 1 cut(s) | 3015 |
| SfaNI | GCATC | 5 cut(s) | 892, 2467, 2650, 2889, 3499 |
| SfcI | CTRYAG | 2 cut(s) | 176, 1101 |
| SgrDI | CGTCGACG | 1 cut(s) | 2125 |
| SinI | GGWCC | 3 cut(s) | 28, 64, 1187 |
| SmaI | CCCGGG | 1 cut(s) | 635 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 718, 1947, 2475, 2658 |
| SmlI | CTYRAG | 4 cut(s) | 92, 104, 3583, 3674 |
| SmoI | CTYRAG | 4 cut(s) | 92, 104, 3583, 3674 |
| SphI | GCATGC | 1 cut(s) | 3362 |
| SseBI | AGGCCT | 1 cut(s) | 12 |
| SsiI | CCGC | 8 cut(s) | 5, 123, 462, 667, 1608, 1831, 2325, 2339 |
| SspI | AATATT | 2 cut(s) | 1914, 2143 |
| SstI | GAGCTC | 1 cut(s) | 3543 |
| StuI | AGGCCT | 1 cut(s) | 12 |
| StyD4I | CCNGG | 7 cut(s) | 24, 66, 208, 632, 633, 2500, 3015 |
| StyI | CCWWGG | 3 cut(s) | 1140, 1152, 3001 |
| TaaI | ACNGT | 7 cut(s) | 58, 607, 1601, 1721, 2765, 3608, 3792 |
| TaiI | ACGT | 7 cut(s) | 1234, 1423, 2126, 2251, 2872, 3038, 3387 |
| TaqII | GACCGA | 2 cut(s) | 52, 1272 |
| TatI | WGTACW | 3 cut(s) | 910, 3514, 3610 |
| TauI | GCSGC | 2 cut(s) | 464, 670 |
| TscAI | CASTG | 6 cut(s) | 1179, 1465, 2574, 2770, 3291, 3327 |
| TseFI | GTSAC | 5 cut(s) | 1694, 1721, 3019, 3276, 3792 |
| Tsp45I | GTSAC | 5 cut(s) | 1694, 1721, 3019, 3276, 3792 |
| TspGWI | ACGGA | 5 cut(s) | 20, 2052, 3335, 3412, 3765 |
| TspMI | CCCGGG | 1 cut(s) | 633 |
| TspRI | CASTG | 6 cut(s) | 1179, 1465, 2574, 2770, 3291, 3327 |
| Vha464I | CTTAAG | 1 cut(s) | 3674 |
| VneI | GTGCAC | 1 cut(s) | 3625 |
| VpaK11BI | GGWCC | 3 cut(s) | 28, 64, 1187 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 414 |
| XapI | RAATTY | 2 cut(s) | 574, 848 |
| XbaI | TCTAGA | 1 cut(s) | 2707 |
| XceI | RCATGY | 6 cut(s) | 1376, 1799, 1877, 1946, 3362, 3374 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2143, 3303 |
| XmaI | CCCGGG | 1 cut(s) | 633 |
| XmiI | GTMKAC | 4 cut(s) | 72, 2026, 2126, 2245 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1005, 3169, 3471 |