Prupe.5G217200_v2.0.a1
TCP Family

transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
17024859 .. 17027440
2582 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G217200.1

Sequence Viewer

Length: 1407 bp
ATGTTTCCCTCAAACTCAAACAATAATCTCAACAATACTGGCAACGAATTACCCGTGTCTTATTCTCATGTCGACCAATCCTTTTTCCACAGCCGGCCTTTTCTCCATGAAATCACTACATTAAACCCCAATTCCCTTCATCCCAATCCCAATTCCAAACAAGAAGAAGAAGAGGAACAACAACAACAACAAGAAGGCCCTCATCACCATCCTTTGTCTTTCTTCTACATCCCCTCTCCTTTCGAAGACGACGACGTTTCACTCTTCCAACAACACCATCACTATGACCATCACCATGACCATGTCCATGACATGCCGCTACATGACTCACAAGCACCACCCCTTACTACTATGAGGGAAGCTGTTGCTGCTAACAACACCTTAGCCGATGACCATCGTCAGACCACCACCACTTCCACTACTCTCAATATTAAAATGGTGGATTGGGATTCCAACAAAAATCATGGCGAGATGATGAATATGGATCAGCCACAGATCCCGAGAAGAAGGTCTTGCAAGAGAGACCGCCACAGCAAGATTAATACTGCCCGAGGCCTCAGGGACCGCAGAATGAGATTGTCTCTTGAAGTTGCCCGCAAGTTCTTCTGGTTGCAAGACGCGCTGCACTTTGACAAGGCCAGCAAAACAGTTGAGTGGTTGCTCATTCAGGCCACACCTGAAATCAAGAAACTAGTAGGAGACTGCAAACACATGATGAGCTCTACCAAAAGCACATCTCCTGCCACTTCTGAGTCATGCGAAGTGATATCTGGCATAGACGAGGCTGCAACAAACACCAACATTCACATTAATATTGATGGGGGAAATGATGGTGATGATAAACTAATACGAAGCTGCGAGATCCAGCCTTCAGCCAAAGAGAGAAAGGTTGCCCGCCGGCAATTGTCAAGGAAGACCGCATTTCACCCTCTTTCAAAAGCTTCGAGAGAAAAGGCAAGGGCAAGGGCAAGGGAAAAAGCAAGAGAAAAGCAGCGGACGCACCAAAGAGTAGTTGATGTTGATGATCAATCTAAGAAGCAAAGAGGTGATCAGGAAAACCTGAGCCGATTGAGTTCTTGGAGCCCCTTTGAAACTGGGGAAGAATCAGCTGGGACTCAAAGCCACAACAACAACAACAACATAAACATCAATTCATTGGAGGGGCTGGTTCATCACGAGATTGAAGAACCAATGAGCAGCTGCCAAGTAGGGGATCATCCAGACTTGGTTGTTGATCATGGAACTACACATGATCCTTTGGTGATTATGGGAAAGTGGAGCCCCCCTTCAATATTCAGTTCTCTGCATCAAAACATTGGAATTTCCCAAGAGCACCATCAGTTTGCAGACTTCCAATTCCTTGGAAAACCATGGGAGGTCTACAACAATACTCATAATCTATTCTAA

Protein Analysis

469

Amino Acids

53.62

Weight (kDa)

6.27

Isoelectric Point (pI)

59.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 72, 1380
AccII CGCG 1 cut(s) 620
AciI CCGC 7 cut(s) 317, 526, 565, 595, 895, 918, 994
AclWI GGATC 5 cut(s) 490, 492, 856, 1221, 1247
AcsI RAATTY 1 cut(s) 1320
AcuI CTGAAG 1 cut(s) 855
AfiI CCNNNNNNNGG 1 cut(s) 1210
AgsI TTSAA 5 cut(s) 587, 936, 1091, 1184, 1290
AhlI ACTAGT 1 cut(s) 691
AluBI AGCT 6 cut(s) 362, 720, 855, 941, 1109, 1200
AluI AGCT 6 cut(s) 362, 720, 855, 941, 1109, 1200
Alw21I GWGCWC 2 cut(s) 722, 1335
Alw26I GTCTC 3 cut(s) 516, 585, 693
AlwI GGATC 5 cut(s) 490, 492, 856, 1221, 1247
Ama87I CYCGRG 2 cut(s) 499, 549
AoxI GGCC 5 cut(s) 95, 196, 553, 636, 669
ApeKI GCWGC 7 cut(s) 368, 622, 785, 855, 991, 1197, 1200
ApoI RAATTY 1 cut(s) 1320
AseI ATTAAT 2 cut(s) 540, 810
AspLEI GCGC 1 cut(s) 622
AspS9I GGNCC 2 cut(s) 197, 562
AsuHPI GGTGA 6 cut(s) 197, 284, 845, 917, 1058, 1273
AsuII TTCGAA 1 cut(s) 243
AvaI CYCGRG 2 cut(s) 499, 549
AvaII GGWCC 1 cut(s) 562
AxyI CCTNAGG 1 cut(s) 557
BanII GRGCYC 3 cut(s) 722, 1085, 1283
BauI CACGAG 1 cut(s) 1175
BbsI GAAGAC 2 cut(s) 252, 920
Bbv12I GWGCWC 2 cut(s) 722, 1335
BbvI GCAGC 7 cut(s) 355, 609, 772, 842, 1003, 1187, 1209
BccI CCATC 7 cut(s) 216, 285, 297, 402, 812, 824, 1344
BclI TGATCA 3 cut(s) 1024, 1048, 1234
BcoDI GTCTC 3 cut(s) 516, 585, 693
BcuI ACTAGT 1 cut(s) 691
BfaI CTAG 1 cut(s) 692
BisI GCNGC 8 cut(s) 317, 369, 623, 786, 856, 992, 1198, 1201
BlsI GCNGC 8 cut(s) 318, 370, 624, 787, 857, 993, 1199, 1202
Bme18I GGWCC 1 cut(s) 562
BmeT110I CYCGRG 2 cut(s) 499, 549
BmgT120I GGNCC 2 cut(s) 197, 562
BmiI GGNNCC 3 cut(s) 563, 1082, 1280
BmrI ACTGGG 1 cut(s) 1104
BmsI GCATC 1 cut(s) 1315
BmuI ACTGGG 1 cut(s) 1104
BoxI GACNNNNGTC 1 cut(s) 396
BpiI GAAGAC 2 cut(s) 252, 920
BplI GAGNNNNNCTC 2 cut(s) 565, 597
Bpu10I CCTNAGC 2 cut(s) 382, 1061
Bpu14I TTCGAA 1 cut(s) 243
BsaBI GATNNNNATC 1 cut(s) 393
BsaI GGTCTC 1 cut(s) 516
BsaJI CCNNGG 3 cut(s) 550, 1360, 1370
Bsc4I CCNNNNNNNGG 1 cut(s) 1210
Bse118I RCCGGY 2 cut(s) 93, 897
Bse1I ACTGG 2 cut(s) 43, 1099
Bse21I CCTNAGG 1 cut(s) 557
Bse8I GATNNNNATC 1 cut(s) 393
BseDI CCNNGG 3 cut(s) 550, 1360, 1370
BseGI GGATG 4 cut(s) 139, 208, 228, 1216
BseJI GATNNNNATC 1 cut(s) 393
BseLI CCNNNNNNNGG 1 cut(s) 1210
BseMII CTCAG 3 cut(s) 571, 741, 1052
BseNI ACTGG 2 cut(s) 43, 1099
BseXI GCAGC 7 cut(s) 355, 609, 772, 842, 1003, 1187, 1209
BseYI CCCAGC 1 cut(s) 1109
BsgI GTGCAG 1 cut(s) 608
Bsh1236I CGCG 1 cut(s) 620
BshFI GGCC 5 cut(s) 97, 198, 555, 638, 671
BsiHKAI GWGCWC 2 cut(s) 722, 1335
BsiHKCI CYCGRG 2 cut(s) 499, 549
BsiSI CCGG 2 cut(s) 94, 898
BslFI GGGAC 2 cut(s) 575, 1126
BslI CCNNNNNNNGG 1 cut(s) 1210
BsmAI GTCTC 3 cut(s) 516, 585, 693
BsmFI GGGAC 2 cut(s) 575, 1126
BsnI GGCC 5 cut(s) 97, 198, 555, 638, 671
Bso31I GGTCTC 1 cut(s) 516
BsoBI CYCGRG 2 cut(s) 499, 549
Bsp119I TTCGAA 1 cut(s) 243
Bsp1286I GDGCHC 4 cut(s) 722, 1085, 1283, 1335
Bsp143I GATC 8 cut(s) 484, 495, 861, 1024, 1048, 1213, 1234, 1252
Bsp19I CCATGG 1 cut(s) 1370
BspACI CCGC 7 cut(s) 317, 526, 565, 595, 895, 918, 994
BspANI GGCC 5 cut(s) 97, 198, 555, 638, 671
BspCNI CTCAG 3 cut(s) 570, 742, 1053
BspFNI CGCG 1 cut(s) 620
BspLI GGNNCC 3 cut(s) 563, 1082, 1280
BspPI GGATC 5 cut(s) 490, 492, 856, 1221, 1247
BspT104I TTCGAA 1 cut(s) 243
BspTNI GGTCTC 1 cut(s) 516
BsrFI RCCGGY 2 cut(s) 93, 897
BsrI ACTGG 2 cut(s) 43, 1099
BssAI RCCGGY 2 cut(s) 93, 897
BssECI CCNNGG 3 cut(s) 550, 1360, 1370
BssMI GATC 8 cut(s) 484, 495, 861, 1024, 1048, 1213, 1234, 1252
BssSI CACGAG 1 cut(s) 1175
BssT1I CCWWGG 2 cut(s) 1360, 1370
Bst2BI CACGAG 1 cut(s) 1175
Bst4CI ACNGT 1 cut(s) 649
Bst6I CTCTTC 2 cut(s) 165, 269
BstBI TTCGAA 1 cut(s) 243
BstC8I GCNNGC 5 cut(s) 95, 595, 640, 895, 899
BstDEI CTNAG 5 cut(s) 382, 557, 750, 1032, 1061
BstDSI CCRYGG 1 cut(s) 1370
BstF5I GGATG 4 cut(s) 139, 208, 228, 1216
BstFNI CGCG 1 cut(s) 620
BstHHI GCGC 1 cut(s) 622
BstKTI GATC 8 cut(s) 487, 498, 864, 1027, 1051, 1216, 1237, 1255
BstMAI GTCTC 3 cut(s) 516, 585, 693
BstMBI GATC 8 cut(s) 484, 495, 861, 1024, 1048, 1213, 1234, 1252
BstMWI GCNNNNNNNGC 3 cut(s) 368, 619, 997
BstNSI RCATGY 1 cut(s) 316
BstPAI GACNNNNGTC 1 cut(s) 396
BstUI CGCG 1 cut(s) 620
BstV1I GCAGC 7 cut(s) 355, 609, 772, 842, 1003, 1187, 1209
BstV2I GAAGAC 2 cut(s) 252, 920
BstX2I RGATCY 2 cut(s) 495, 861
BstXI CCANNNNNNTGG 1 cut(s) 1361
BstYI RGATCY 2 cut(s) 495, 861
Bsu36I CCTNAGG 1 cut(s) 557
BsuRI GGCC 5 cut(s) 97, 198, 555, 638, 671
BtgI CCRYGG 1 cut(s) 1370
BtsCI GGATG 4 cut(s) 139, 208, 228, 1216
Cac8I GCNNGC 5 cut(s) 95, 595, 640, 895, 899
CfoI GCGC 1 cut(s) 622
Cfr10I RCCGGY 2 cut(s) 93, 897
Cfr13I GGNCC 2 cut(s) 197, 562
CseI GACGC 2 cut(s) 626, 1006
DdeI CTNAG 5 cut(s) 382, 557, 750, 1032, 1061
DpnI GATC 8 cut(s) 486, 497, 863, 1026, 1050, 1215, 1236, 1254
DpnII GATC 8 cut(s) 484, 495, 861, 1024, 1048, 1213, 1234, 1252
Eam1104I CTCTTC 2 cut(s) 165, 269
EarI CTCTTC 2 cut(s) 165, 269
Ecl136II GAGCTC 1 cut(s) 720
Eco130I CCWWGG 2 cut(s) 1360, 1370
Eco147I AGGCCT 1 cut(s) 555
Eco24I GRGCYC 3 cut(s) 722, 1085, 1283
Eco31I GGTCTC 1 cut(s) 516
Eco32I GATATC 1 cut(s) 768
Eco47I GGWCC 1 cut(s) 562
Eco53kI GAGCTC 1 cut(s) 720
Eco57I CTGAAG 1 cut(s) 855
Eco81I CCTNAGG 1 cut(s) 557
Eco88I CYCGRG 2 cut(s) 499, 549
EcoICRI GAGCTC 1 cut(s) 720
EcoO109I RGGNCCY 1 cut(s) 197
EcoRV GATATC 1 cut(s) 768
EcoT14I CCWWGG 2 cut(s) 1360, 1370
EcoT38I GRGCYC 3 cut(s) 722, 1085, 1283
ErhI CCWWGG 2 cut(s) 1360, 1370
FalI AAGNNNNNCTT 2 cut(s) 496, 528
FaqI GGGAC 2 cut(s) 575, 1126
FauI CCCGC 2 cut(s) 602, 902
FbaI TGATCA 3 cut(s) 1024, 1048, 1234
FblI GTMKAC 2 cut(s) 72, 1380
Fnu4HI GCNGC 8 cut(s) 317, 369, 623, 786, 856, 992, 1198, 1201
FokI GGATG 4 cut(s) 126, 195, 215, 1203
FriOI GRGCYC 3 cut(s) 722, 1085, 1283
Fsp4HI GCNGC 8 cut(s) 317, 369, 623, 786, 856, 992, 1198, 1201
FspBI CTAG 1 cut(s) 692
GlaI GCGC 1 cut(s) 621
GluI GCNGC 8 cut(s) 317, 369, 623, 786, 856, 992, 1198, 1201
GsaI CCCAGC 1 cut(s) 1113
HaeIII GGCC 5 cut(s) 97, 198, 555, 638, 671
HapII CCGG 2 cut(s) 94, 898
HgaI GACGC 2 cut(s) 626, 1006
HhaI GCGC 1 cut(s) 622
Hin6I GCGC 1 cut(s) 620
HinP1I GCGC 1 cut(s) 620
HincII GTYRAC 1 cut(s) 73
HindII GTYRAC 1 cut(s) 73
HindIII AAGCTT 1 cut(s) 939
HinfI GANTC 5 cut(s) 326, 449, 752, 1103, 1114
HpaII CCGG 2 cut(s) 94, 898
HphI GGTGA 6 cut(s) 197, 284, 845, 917, 1058, 1273
Hpy166II GTNNAC 2 cut(s) 73, 1381
Hpy188I TCNGA 2 cut(s) 402, 751
Hpy188III TCNNGA 7 cut(s) 499, 584, 685, 945, 1052, 1175, 1220
Hpy8I GTNNAC 2 cut(s) 73, 1381
Hpy99I CGWCG 2 cut(s) 254, 257
HpyAV CCTTC 5 cut(s) 146, 188, 501, 879, 1296
HpyCH4III ACNGT 1 cut(s) 649
HpyCH4IV ACGT 1 cut(s) 255
HpyCH4V TGCA 7 cut(s) 516, 613, 625, 705, 788, 1306, 1346
HpyF10VI GCNNNNNNNGC 3 cut(s) 368, 619, 997
HpyF3I CTNAG 5 cut(s) 382, 557, 750, 1032, 1061
HpySE526I ACGT 1 cut(s) 255
HspAI GCGC 1 cut(s) 620
KroI GCCGGC 2 cut(s) 93, 897
KroNI GCCGGC 2 cut(s) 95, 899
Ksp22I TGATCA 3 cut(s) 1024, 1048, 1234
Kzo9I GATC 8 cut(s) 484, 495, 861, 1024, 1048, 1213, 1234, 1252
LmnI GCTCC 2 cut(s) 1080, 1278
Lsp1109I GCAGC 7 cut(s) 355, 609, 772, 842, 1003, 1187, 1209
LweI GCATC 1 cut(s) 1315
MaeI CTAG 1 cut(s) 692
MaeII ACGT 1 cut(s) 255
MalI GATC 8 cut(s) 486, 497, 863, 1026, 1050, 1215, 1236, 1254
MboI GATC 8 cut(s) 484, 495, 861, 1024, 1048, 1213, 1234, 1252
MfeI CAATTG 1 cut(s) 902
MflI RGATCY 2 cut(s) 495, 861
MhlI GDGCHC 4 cut(s) 722, 1085, 1283, 1335
MluCI AATT 7 cut(s) 47, 130, 151, 902, 1150, 1320, 1355
MlyI GAGTC 3 cut(s) 320, 761, 1108
MmeI TCCRAC 2 cut(s) 292, 477
MroNI GCCGGC 2 cut(s) 93, 897
MseI TTAA 4 cut(s) 122, 432, 540, 810
MslI CAYNNNNRTG 4 cut(s) 282, 294, 300, 306
MspA1I CMGCKG 3 cut(s) 994, 1109, 1200
MspI CCGG 2 cut(s) 94, 898
MunI CAATTG 1 cut(s) 902
MvnI CGCG 1 cut(s) 620
MwoI GCNNNNNNNGC 3 cut(s) 368, 619, 997
NaeI GCCGGC 2 cut(s) 95, 899
NcoI CCATGG 1 cut(s) 1370
NdeII GATC 8 cut(s) 484, 495, 861, 1024, 1048, 1213, 1234, 1252
NgoMIV GCCGGC 2 cut(s) 93, 897
NlaIV GGNNCC 3 cut(s) 563, 1082, 1280
NspI RCATGY 1 cut(s) 316
NspV TTCGAA 1 cut(s) 243
PceI AGGCCT 1 cut(s) 555
PcsI WCGNNNNNNNCGW 2 cut(s) 51, 249
PdiI GCCGGC 2 cut(s) 95, 899
PfeI GAWTC 2 cut(s) 449, 1103
PflFI GACNNNGTC 1 cut(s) 302
PkrI GCNGC 8 cut(s) 318, 370, 624, 787, 857, 993, 1199, 1202
PleI GAGTC 3 cut(s) 320, 760, 1108
PpsI GAGTC 3 cut(s) 320, 760, 1108
PshAI GACNNNNGTC 1 cut(s) 396
PshBI ATTAAT 2 cut(s) 540, 810
Psp124BI GAGCTC 1 cut(s) 722
PspFI CCCAGC 1 cut(s) 1109
PspN4I GGNNCC 3 cut(s) 563, 1082, 1280
PspPI GGNCC 2 cut(s) 197, 562
PsuI RGATCY 2 cut(s) 495, 861
PsyI GACNNNGTC 1 cut(s) 302
PvuII CAGCTG 2 cut(s) 1109, 1200
RseI CAYNNNNRTG 4 cut(s) 282, 294, 300, 306
SacI GAGCTC 1 cut(s) 722
SalI GTCGAC 1 cut(s) 71
SaqAI TTAA 4 cut(s) 122, 432, 540, 810
SatI GCNGC 8 cut(s) 317, 369, 623, 786, 856, 992, 1198, 1201
Sau3AI GATC 8 cut(s) 484, 495, 861, 1024, 1048, 1213, 1234, 1252
Sau96I GGNCC 2 cut(s) 197, 562
SchI GAGTC 3 cut(s) 320, 761, 1108
SduI GDGCHC 4 cut(s) 722, 1085, 1283, 1335
SfaNI GCATC 1 cut(s) 1315
SfuI TTCGAA 1 cut(s) 243
SinI GGWCC 1 cut(s) 562
SmiMI CAYNNNNRTG 4 cut(s) 282, 294, 300, 306
SpeI ACTAGT 1 cut(s) 691
Sse9I AATT 7 cut(s) 47, 130, 151, 902, 1150, 1320, 1355
SseBI AGGCCT 1 cut(s) 555
SsiI CCGC 7 cut(s) 317, 526, 565, 595, 895, 918, 994
SspI AATATT 3 cut(s) 430, 814, 1293
SspMI CTAG 1 cut(s) 692
SstI GAGCTC 1 cut(s) 722
StuI AGGCCT 1 cut(s) 555
StyI CCWWGG 2 cut(s) 1360, 1370
TaaI ACNGT 1 cut(s) 649
TaiI ACGT 1 cut(s) 258
TaqI TCGA 3 cut(s) 72, 243, 944
TasI AATT 7 cut(s) 47, 130, 151, 902, 1150, 1320, 1355
TauI GCSGC 1 cut(s) 319
TfiI GAWTC 2 cut(s) 449, 1103
Tru1I TTAA 4 cut(s) 122, 432, 540, 810
Tru9I TTAA 4 cut(s) 122, 432, 540, 810
TseI GCWGC 7 cut(s) 368, 622, 785, 855, 991, 1197, 1200
TspDTI ATGAA 5 cut(s) 123, 128, 491, 1143, 1160
Tth111I GACNNNGTC 1 cut(s) 302
VpaK11BI GGWCC 1 cut(s) 562
VspI ATTAAT 2 cut(s) 540, 810
XapI RAATTY 1 cut(s) 1320
XceI RCATGY 1 cut(s) 316
XmiI GTMKAC 2 cut(s) 72, 1380
XspI CTAG 1 cut(s) 692
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.