ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48650 AT1G48650 |
| fragaria_vesca | FvH4_5g16860 |
| malus_domestica | MD06G1222500.v1.1 MD14G1231600.v1.1 |
| prunus_persica | Prupe.5G227100_v2.0.a1 |
| pyrus_communis | pycom06g19810 pycom06g19820 pycom14g19280 |
| rosa_chinensis | RchiOBHm_Chr7g0179211 |
| rosa_laevigata | RLG00000005374 |
| rosa_multiflora | Rmu_sc0009798.1_g000005 Rmu_sc0021799.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00274220 |
| rosa_rugosa | Rorug06G0422200 |
| rosa_samantha | Rh7BG021500 |
| rosa_wichuraiana | Rw7G001770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 35 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1723 |
| Acc65I | GGTACC | 1 cut(s) | 2953 |
| AccB1I | GGYRCC | 5 cut(s) | 328, 2329, 2953, 3093, 3307 |
| AccBSI | CCGCTC | 1 cut(s) | 2831 |
| AccI | GTMKAC | 2 cut(s) | 1302, 1408 |
| AccII | CGCG | 3 cut(s) | 235, 280, 427 |
| AclWI | GGATC | 6 cut(s) | 1869, 1886, 2489, 2502, 2528, 2571 |
| AcoI | YGGCCR | 1 cut(s) | 3298 |
| AcsI | RAATTY | 8 cut(s) | 760, 770, 873, 1977, 2692, 2935, 2961, 3004 |
| AcuI | CTGAAG | 3 cut(s) | 117, 954, 3119 |
| AcvI | CACGTG | 2 cut(s) | 241, 264 |
| AcyI | GRCGYC | 4 cut(s) | 381, 2249, 2330, 2419 |
| AflIII | ACRYGT | 1 cut(s) | 1327 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3619 |
| AhlI | ACTAGT | 1 cut(s) | 2015 |
| AjiI | CACGTC | 1 cut(s) | 542 |
| AjnI | CCWGG | 9 cut(s) | 267, 521, 1498, 1630, 1807, 2114, 2170, 2854, 3074 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3373, 3405 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2808, 2840 |
| Alw21I | GWGCWC | 2 cut(s) | 1483, 1525 |
| Alw26I | GTCTC | 7 cut(s) | 57, 1036, 1731, 2006, 2063, 3231, 3268 |
| AlwI | GGATC | 6 cut(s) | 1869, 1886, 2489, 2502, 2528, 2571 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3560 |
| Ama87I | CYCGRG | 2 cut(s) | 1104, 1719 |
| ApeKI | GCWGC | 9 cut(s) | 310, 1100, 1178, 1688, 2129, 3403, 3517, 3554, 3557 |
| ApoI | RAATTY | 8 cut(s) | 760, 770, 873, 1977, 2692, 2935, 2961, 3004 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2266, 2298 |
| AseI | ATTAAT | 1 cut(s) | 1848 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1371, 2299, 2741, 3186 |
| Asp718I | GGTACC | 1 cut(s) | 2953 |
| AspA2I | CCTAGG | 1 cut(s) | 1139 |
| AspLEI | GCGC | 3 cut(s) | 429, 2332, 2896 |
| AspS9I | GGNCC | 7 cut(s) | 102, 245, 821, 1903, 2382, 3271, 3377 |
| AsuC2I | CCSGG | 3 cut(s) | 199, 2950, 3020 |
| AsuHPI | GGTGA | 8 cut(s) | 1049, 1214, 1249, 2186, 3007, 3227, 3377, 3596 |
| AvaI | CYCGRG | 2 cut(s) | 1104, 1719 |
| AvaII | GGWCC | 4 cut(s) | 102, 821, 1903, 3271 |
| AvrII | CCTAGG | 1 cut(s) | 1139 |
| BaeGI | GKGCMC | 2 cut(s) | 333, 3096 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3018, 3051 |
| BamHI | GGATCC | 1 cut(s) | 2494 |
| BanI | GGYRCC | 5 cut(s) | 328, 2329, 2953, 3093, 3307 |
| BanII | GRGCYC | 1 cut(s) | 843 |
| BbrPI | CACGTG | 2 cut(s) | 241, 264 |
| BbsI | GAAGAC | 1 cut(s) | 758 |
| Bbv12I | GWGCWC | 2 cut(s) | 1483, 1525 |
| BbvCI | CCTCAGC | 3 cut(s) | 314, 630, 3561 |
| BbvI | GCAGC | 9 cut(s) | 322, 1087, 1165, 1675, 2116, 3390, 3529, 3544, 3566 |
| BccI | CCATC | 8 cut(s) | 465, 571, 809, 2119, 2193, 2633, 2906, 3083 |
| BceAI | ACGGC | 5 cut(s) | 127, 159, 339, 576, 1820 |
| BciT130I | CCWGG | 9 cut(s) | 269, 523, 1500, 1632, 1809, 2116, 2172, 2856, 3076 |
| BciVI | GTATCC | 1 cut(s) | 2755 |
| BclI | TGATCA | 2 cut(s) | 2611, 2776 |
| BcnI | CCSGG | 3 cut(s) | 199, 2950, 3020 |
| BcoDI | GTCTC | 7 cut(s) | 57, 1036, 1731, 2006, 2063, 3231, 3268 |
| BcuI | ACTAGT | 1 cut(s) | 2015 |
| BfmI | CTRYAG | 4 cut(s) | 1117, 1179, 1665, 3483 |
| BfoI | RGCGCY | 1 cut(s) | 2333 |
| BfuI | GTATCC | 1 cut(s) | 2755 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2327 |
| BglII | AGATCT | 1 cut(s) | 2401 |
| BlnI | CCTAGG | 1 cut(s) | 1139 |
| BmcAI | AGTACT | 1 cut(s) | 2681 |
| Bme18I | GGWCC | 4 cut(s) | 102, 821, 1903, 3271 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3619 |
| BmeT110I | CYCGRG | 2 cut(s) | 1104, 1719 |
| BmgBI | CACGTC | 1 cut(s) | 542 |
| BmgT120I | GGNCC | 7 cut(s) | 102, 245, 821, 1903, 2382, 3271, 3377 |
| BmrI | ACTGGG | 1 cut(s) | 1208 |
| BmuI | ACTGGG | 1 cut(s) | 1208 |
| BpiI | GAAGAC | 1 cut(s) | 758 |
| BpmI | CTGGAG | 4 cut(s) | 1553, 1614, 2707, 3058 |
| Bpu10I | CCTNAGC | 3 cut(s) | 314, 630, 3561 |
| BpuEI | CTTGAG | 1 cut(s) | 2741 |
| BpuMI | CCSGG | 3 cut(s) | 199, 2950, 3020 |
| BsaAI | YACGTR | 2 cut(s) | 241, 264 |
| BsaBI | GATNNNNATC | 1 cut(s) | 717 |
| BsaHI | GRCGYC | 4 cut(s) | 381, 2249, 2330, 2419 |
| BsaI | GGTCTC | 1 cut(s) | 3268 |
| BsaJI | CCNNGG | 8 cut(s) | 522, 864, 1139, 1155, 1712, 2949, 2972, 3075 |
| Bse3DI | GCAATG | 1 cut(s) | 2252 |
| Bse8I | GATNNNNATC | 1 cut(s) | 717 |
| BseBI | CCWGG | 9 cut(s) | 269, 523, 1500, 1632, 1809, 2116, 2172, 2856, 3076 |
| BseDI | CCNNGG | 8 cut(s) | 522, 864, 1139, 1155, 1712, 2949, 2972, 3075 |
| BseGI | GGATG | 8 cut(s) | 74, 582, 661, 1846, 1876, 2111, 3094, 3556 |
| BseJI | GATNNNNATC | 1 cut(s) | 717 |
| BseMI | GCAATG | 1 cut(s) | 2252 |
| BseRI | GAGGAG | 4 cut(s) | 331, 851, 1688, 3191 |
| BseSI | GKGCMC | 2 cut(s) | 333, 3096 |
| BseXI | GCAGC | 9 cut(s) | 322, 1087, 1165, 1675, 2116, 3390, 3529, 3544, 3566 |
| BseYI | CCCAGC | 1 cut(s) | 1134 |
| BsgI | GTGCAG | 2 cut(s) | 2684, 2688 |
| Bsh1236I | CGCG | 3 cut(s) | 235, 280, 427 |
| Bsh1285I | CGRYCG | 1 cut(s) | 203 |
| BshNI | GGYRCC | 5 cut(s) | 328, 2329, 2953, 3093, 3307 |
| BsiEI | CGRYCG | 1 cut(s) | 203 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1483, 1525 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1104, 1719 |
| BsiSI | CCGG | 5 cut(s) | 199, 2844, 2949, 3019, 3426 |
| BslFI | GGGAC | 2 cut(s) | 611, 1262 |
| BsmAI | GTCTC | 7 cut(s) | 57, 1036, 1731, 2006, 2063, 3231, 3268 |
| BsmFI | GGGAC | 2 cut(s) | 611, 1262 |
| BsmI | GAATGC | 2 cut(s) | 220, 3592 |
| Bso31I | GGTCTC | 1 cut(s) | 3268 |
| BsoBI | CYCGRG | 2 cut(s) | 1104, 1719 |
| Bsp1286I | GDGCHC | 5 cut(s) | 333, 843, 1483, 1525, 3096 |
| Bsp19I | CCATGG | 3 cut(s) | 864, 1155, 2972 |
| BspFNI | CGCG | 3 cut(s) | 235, 280, 427 |
| BspHI | TCATGA | 2 cut(s) | 1348, 3129 |
| BspMAI | CTGCAG | 2 cut(s) | 1121, 1183 |
| BspPI | GGATC | 6 cut(s) | 1869, 1886, 2489, 2502, 2528, 2571 |
| BspT107I | GGYRCC | 5 cut(s) | 328, 2329, 2953, 3093, 3307 |
| BspTNI | GGTCTC | 1 cut(s) | 3268 |
| BsrBI | CCGCTC | 1 cut(s) | 2831 |
| BsrDI | GCAATG | 1 cut(s) | 2252 |
| BssECI | CCNNGG | 8 cut(s) | 522, 864, 1139, 1155, 1712, 2949, 2972, 3075 |
| BssNI | GRCGYC | 4 cut(s) | 381, 2249, 2330, 2419 |
| BssT1I | CCWWGG | 5 cut(s) | 864, 1139, 1155, 1712, 2972 |
| Bst2UI | CCWGG | 9 cut(s) | 269, 523, 1500, 1632, 1809, 2116, 2172, 2856, 3076 |
| Bst4CI | ACNGT | 9 cut(s) | 366, 996, 1669, 1709, 2410, 2489, 2589, 2609, 3487 |
| Bst6I | CTCTTC | 4 cut(s) | 1468, 2140, 2736, 3632 |
| BstACI | GRCGYC | 4 cut(s) | 381, 2249, 2330, 2419 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3412 |
| BstBAI | YACGTR | 2 cut(s) | 241, 264 |
| BstC8I | GCNNGC | 8 cut(s) | 282, 893, 968, 972, 1117, 1914, 2518, 3083 |
| BstDSI | CCRYGG | 3 cut(s) | 864, 1155, 2972 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 20, 2315 |
| BstF5I | GGATG | 8 cut(s) | 74, 582, 661, 1846, 1876, 2111, 3094, 3556 |
| BstFNI | CGCG | 3 cut(s) | 235, 280, 427 |
| BstH2I | RGCGCY | 1 cut(s) | 2333 |
| BstHHI | GCGC | 3 cut(s) | 429, 2332, 2896 |
| BstMAI | GTCTC | 7 cut(s) | 57, 1036, 1731, 2006, 2063, 3231, 3268 |
| BstMCI | CGRYCG | 1 cut(s) | 203 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 290, 310, 838, 2327, 2576, 3091, 3412, 3563 |
| BstNI | CCWGG | 9 cut(s) | 269, 523, 1500, 1632, 1809, 2116, 2172, 2856, 3076 |
| BstNSI | RCATGY | 2 cut(s) | 1331, 1920 |
| BstSFI | CTRYAG | 4 cut(s) | 1117, 1179, 1665, 3483 |
| BstSLI | GKGCMC | 2 cut(s) | 333, 3096 |
| BstUI | CGCG | 3 cut(s) | 235, 280, 427 |
| BstV1I | GCAGC | 9 cut(s) | 322, 1087, 1165, 1675, 2116, 3390, 3529, 3544, 3566 |
| BstV2I | GAAGAC | 1 cut(s) | 758 |
| BstX2I | RGATCY | 5 cut(s) | 1891, 2401, 2494, 2533, 2563 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 437, 2973 |
| BstYI | RGATCY | 5 cut(s) | 1891, 2401, 2494, 2533, 2563 |
| BsuI | GTATCC | 1 cut(s) | 2755 |
| BtgI | CCRYGG | 3 cut(s) | 864, 1155, 2972 |
| BtrI | CACGTC | 1 cut(s) | 542 |
| BtsCI | GGATG | 8 cut(s) | 74, 582, 661, 1846, 1876, 2111, 3094, 3556 |
| BtsI | GCAGTG | 1 cut(s) | 187 |
| BtsIMutI | CAGTG | 7 cut(s) | 187, 255, 992, 1272, 2415, 2614, 3492 |
| Cac8I | GCNNGC | 8 cut(s) | 282, 893, 968, 972, 1117, 1914, 2518, 3083 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3560 |
| CciI | TCATGA | 2 cut(s) | 1348, 3129 |
| CfoI | GCGC | 3 cut(s) | 429, 2332, 2896 |
| Cfr13I | GGNCC | 7 cut(s) | 102, 245, 821, 1903, 2382, 3271, 3377 |
| CseI | GACGC | 4 cut(s) | 224, 389, 2257, 2427 |
| CsiI | ACCWGGT | 1 cut(s) | 2170 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3592, 3627 |
| DinI | GGCGCC | 1 cut(s) | 2331 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1723 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3619 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1723 |
| EaeI | YGGCCR | 1 cut(s) | 3298 |
| Eam1104I | CTCTTC | 4 cut(s) | 1468, 2140, 2736, 3632 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3619 |
| EarI | CTCTTC | 4 cut(s) | 1468, 2140, 2736, 3632 |
| EciI | GGCGGA | 1 cut(s) | 2584 |
| Eco130I | CCWWGG | 5 cut(s) | 864, 1139, 1155, 1712, 2972 |
| Eco147I | AGGCCT | 2 cut(s) | 2321, 2520 |
| Eco24I | GRGCYC | 1 cut(s) | 843 |
| Eco31I | GGTCTC | 1 cut(s) | 3268 |
| Eco47I | GGWCC | 4 cut(s) | 102, 821, 1903, 3271 |
| Eco57I | CTGAAG | 3 cut(s) | 117, 954, 3119 |
| Eco72I | CACGTG | 2 cut(s) | 241, 264 |
| Eco88I | CYCGRG | 2 cut(s) | 1104, 1719 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 20, 2315 |
| EcoO109I | RGGNCCY | 4 cut(s) | 102, 821, 1903, 2382 |
| EcoRI | GAATTC | 2 cut(s) | 2935, 3004 |
| EcoRII | CCWGG | 9 cut(s) | 267, 521, 1498, 1630, 1807, 2114, 2170, 2854, 3074 |
| EcoT14I | CCWWGG | 5 cut(s) | 864, 1139, 1155, 1712, 2972 |
| EcoT38I | GRGCYC | 1 cut(s) | 843 |
| EgeI | GGCGCC | 1 cut(s) | 2331 |
| EheI | GGCGCC | 1 cut(s) | 2331 |
| ErhI | CCWWGG | 5 cut(s) | 864, 1139, 1155, 1712, 2972 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 130, 162, 403, 435, 1359, 1391, 2729, 2761 |
| FaqI | GGGAC | 2 cut(s) | 611, 1262 |
| FauI | CCCGC | 3 cut(s) | 273, 1262, 3074 |
| FauNDI | CATATG | 2 cut(s) | 2077, 3618 |
| FbaI | TGATCA | 2 cut(s) | 2611, 2776 |
| FblI | GTMKAC | 2 cut(s) | 1302, 1408 |
| FokI | GGATG | 8 cut(s) | 61, 589, 668, 1853, 1863, 2098, 3101, 3563 |
| FriOI | GRGCYC | 1 cut(s) | 843 |
| GlaI | GCGC | 3 cut(s) | 428, 2331, 2895 |
| GsaI | CCCAGC | 1 cut(s) | 1138 |
| GsuI | CTGGAG | 4 cut(s) | 1553, 1614, 2707, 3058 |
| HaeII | RGCGCY | 1 cut(s) | 2333 |
| HapII | CCGG | 5 cut(s) | 199, 2844, 2949, 3019, 3426 |
| HgaI | GACGC | 4 cut(s) | 224, 389, 2257, 2427 |
| HhaI | GCGC | 3 cut(s) | 429, 2332, 2896 |
| Hin1I | GRCGYC | 4 cut(s) | 381, 2249, 2330, 2419 |
| Hin6I | GCGC | 3 cut(s) | 427, 2330, 2894 |
| HinP1I | GCGC | 3 cut(s) | 427, 2330, 2894 |
| HincII | GTYRAC | 4 cut(s) | 480, 1303, 1339, 1409 |
| HindII | GTYRAC | 4 cut(s) | 480, 1303, 1339, 1409 |
| HindIII | AAGCTT | 1 cut(s) | 889 |
| HpaI | GTTAAC | 1 cut(s) | 480 |
| HpaII | CCGG | 5 cut(s) | 199, 2844, 2949, 3019, 3426 |
| HphI | GGTGA | 8 cut(s) | 1049, 1214, 1249, 2186, 3007, 3227, 3377, 3596 |
| Hpy166II | GTNNAC | 6 cut(s) | 480, 1303, 1339, 1409, 2270, 2875 |
| Hpy8I | GTNNAC | 6 cut(s) | 480, 1303, 1339, 1409, 2270, 2875 |
| Hpy99I | CGWCG | 2 cut(s) | 280, 1410 |
| HpyAV | CCTTC | 9 cut(s) | 929, 1226, 1234, 1268, 1852, 3319, 3327, 3541, 3574 |
| HpyCH4III | ACNGT | 9 cut(s) | 366, 996, 1669, 1709, 2410, 2489, 2589, 2609, 3487 |
| HpyCH4IV | ACGT | 4 cut(s) | 240, 263, 541, 1354 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 290, 310, 838, 2327, 2576, 3091, 3412, 3563 |
| HpySE526I | ACGT | 4 cut(s) | 240, 263, 541, 1354 |
| Hsp92I | GRCGYC | 4 cut(s) | 381, 2249, 2330, 2419 |
| HspAI | GCGC | 3 cut(s) | 427, 2330, 2894 |
| KasI | GGCGCC | 1 cut(s) | 2329 |
| KpnI | GGTACC | 1 cut(s) | 2957 |
| Ksp22I | TGATCA | 2 cut(s) | 2611, 2776 |
| KspAI | GTTAAC | 1 cut(s) | 480 |
| LmnI | GCTCC | 7 cut(s) | 838, 1486, 1633, 2474, 2805, 3172, 3204 |
| Lsp1109I | GCAGC | 9 cut(s) | 322, 1087, 1165, 1675, 2116, 3390, 3529, 3544, 3566 |
| MabI | ACCWGGT | 1 cut(s) | 2170 |
| MaeII | ACGT | 4 cut(s) | 240, 263, 541, 1354 |
| MaeIII | GTNAC | 8 cut(s) | 176, 236, 259, 1321, 1784, 2180, 2229, 3365 |
| MbiI | CCGCTC | 1 cut(s) | 2831 |
| MfeI | CAATTG | 1 cut(s) | 3458 |
| MflI | RGATCY | 5 cut(s) | 1891, 2401, 2494, 2533, 2563 |
| MhlI | GDGCHC | 5 cut(s) | 333, 843, 1483, 1525, 3096 |
| Mly113I | GGCGCC | 1 cut(s) | 2330 |
| MlyI | GAGTC | 3 cut(s) | 1711, 1733, 2720 |
| MmeI | TCCRAC | 3 cut(s) | 426, 1718, 2624 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1371, 2299, 2741, 3186 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1353, 2971 |
| MspA1I | CMGCKG | 3 cut(s) | 313, 3403, 3557 |
| MspI | CCGG | 5 cut(s) | 199, 2844, 2949, 3019, 3426 |
| MunI | CAATTG | 1 cut(s) | 3458 |
| Mva1269I | GAATGC | 2 cut(s) | 220, 3592 |
| MvaI | CCWGG | 9 cut(s) | 269, 523, 1500, 1632, 1809, 2116, 2172, 2856, 3076 |
| MvnI | CGCG | 3 cut(s) | 235, 280, 427 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 290, 310, 838, 2327, 2576, 3091, 3412, 3563 |
| NarI | GGCGCC | 1 cut(s) | 2330 |
| NciI | CCSGG | 3 cut(s) | 199, 2950, 3020 |
| NcoI | CCATGG | 3 cut(s) | 864, 1155, 2972 |
| NdeI | CATATG | 2 cut(s) | 2077, 3618 |
| NmeAIII | GCCGAG | 2 cut(s) | 1477, 2116 |
| NmuCI | GTSAC | 4 cut(s) | 236, 259, 1784, 3365 |
| NspI | RCATGY | 2 cut(s) | 1331, 1920 |
| PaeR7I | CTCGAG | 2 cut(s) | 1104, 1719 |
| PagI | TCATGA | 2 cut(s) | 1348, 3129 |
| PceI | AGGCCT | 2 cut(s) | 2321, 2520 |
| PciI | ACATGT | 1 cut(s) | 1327 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 440 |
| PctI | GAATGC | 2 cut(s) | 220, 3592 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1371, 2299, 2741, 3186 |
| PfoI | TCCNGGA | 3 cut(s) | 2114, 2854, 3018 |
| PleI | GAGTC | 3 cut(s) | 1711, 1732, 2720 |
| PluTI | GGCGCC | 1 cut(s) | 2333 |
| PmaCI | CACGTG | 2 cut(s) | 241, 264 |
| PmlI | CACGTG | 2 cut(s) | 241, 264 |
| PpsI | GAGTC | 3 cut(s) | 1711, 1732, 2720 |
| Ppu21I | YACGTR | 2 cut(s) | 241, 264 |
| PpuMI | RGGWCCY | 3 cut(s) | 102, 821, 1903 |
| PscI | ACATGT | 1 cut(s) | 1327 |
| PshBI | ATTAAT | 1 cut(s) | 1848 |
| PsiI | TTATAA | 1 cut(s) | 35 |
| Psp5II | RGGWCCY | 3 cut(s) | 102, 821, 1903 |
| Psp6I | CCWGG | 9 cut(s) | 267, 521, 1498, 1630, 1807, 2114, 2170, 2854, 3074 |
| PspCI | CACGTG | 2 cut(s) | 241, 264 |
| PspFI | CCCAGC | 1 cut(s) | 1134 |
| PspGI | CCWGG | 9 cut(s) | 267, 521, 1498, 1630, 1807, 2114, 2170, 2854, 3074 |
| PspPI | GGNCC | 7 cut(s) | 102, 245, 821, 1903, 2382, 3271, 3377 |
| PspPPI | RGGWCCY | 3 cut(s) | 102, 821, 1903 |
| PspXI | VCTCGAGB | 1 cut(s) | 1104 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 161, 193 |
| PstI | CTGCAG | 2 cut(s) | 1121, 1183 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3560 |
| PsuI | RGATCY | 5 cut(s) | 1891, 2401, 2494, 2533, 2563 |
| PvuII | CAGCTG | 3 cut(s) | 313, 3403, 3557 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1353, 2971 |
| SalI | GTCGAC | 2 cut(s) | 1301, 1407 |
| Sau96I | GGNCC | 7 cut(s) | 102, 245, 821, 1903, 2382, 3271, 3377 |
| ScaI | AGTACT | 1 cut(s) | 2681 |
| SchI | GAGTC | 3 cut(s) | 1711, 1733, 2720 |
| SduI | GDGCHC | 5 cut(s) | 333, 843, 1483, 1525, 3096 |
| SexAI | ACCWGGT | 1 cut(s) | 2170 |
| SfcI | CTRYAG | 4 cut(s) | 1117, 1179, 1665, 3483 |
| SfoI | GGCGCC | 1 cut(s) | 2331 |
| Sfr274I | CTCGAG | 2 cut(s) | 1104, 1719 |
| SinI | GGWCC | 4 cut(s) | 102, 821, 1903, 3271 |
| SlaI | CTCGAG | 2 cut(s) | 1104, 1719 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1353, 2971 |
| SmlI | CTYRAG | 3 cut(s) | 1104, 1719, 2756 |
| SmoI | CTYRAG | 3 cut(s) | 1104, 1719, 2756 |
| SpeI | ACTAGT | 1 cut(s) | 2015 |
| SseBI | AGGCCT | 2 cut(s) | 2321, 2520 |
| SspDI | GGCGCC | 1 cut(s) | 2329 |
| SspI | AATATT | 3 cut(s) | 1281, 1540, 1956 |
| StuI | AGGCCT | 2 cut(s) | 2321, 2520 |
| StyI | CCWWGG | 5 cut(s) | 864, 1139, 1155, 1712, 2972 |
| TaaI | ACNGT | 9 cut(s) | 366, 996, 1669, 1709, 2410, 2489, 2589, 2609, 3487 |
| TaiI | ACGT | 4 cut(s) | 243, 266, 544, 1357 |
| TaqI | TCGA | 7 cut(s) | 443, 1105, 1302, 1408, 1720, 2888, 2933 |
| TatI | WGTACW | 4 cut(s) | 1074, 1704, 2679, 3046 |
| TauI | GCSGC | 2 cut(s) | 235, 3303 |
| TscAI | CASTG | 7 cut(s) | 194, 255, 999, 1279, 2415, 2614, 3492 |
| TseFI | GTSAC | 4 cut(s) | 236, 259, 1784, 3365 |
| TseI | GCWGC | 9 cut(s) | 310, 1100, 1178, 1688, 2129, 3403, 3517, 3554, 3557 |
| Tsp45I | GTSAC | 4 cut(s) | 236, 259, 1784, 3365 |
| TspRI | CASTG | 7 cut(s) | 194, 255, 999, 1279, 2415, 2614, 3492 |
| VpaK11BI | GGWCC | 4 cut(s) | 102, 821, 1903, 3271 |
| VspI | ATTAAT | 1 cut(s) | 1848 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 20, 2315 |
| XapI | RAATTY | 8 cut(s) | 760, 770, 873, 1977, 2692, 2935, 2961, 3004 |
| XbaI | TCTAGA | 1 cut(s) | 1543 |
| XceI | RCATGY | 2 cut(s) | 1331, 1920 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3082 |
| XhoI | CTCGAG | 2 cut(s) | 1104, 1719 |
| XmaJI | CCTAGG | 1 cut(s) | 1139 |
| XmiI | GTMKAC | 2 cut(s) | 1302, 1408 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1371, 2299, 2741, 3186 |
| ZrmI | AGTACT | 1 cut(s) | 2681 |