Rorug06G0422200

ATP-dependent RNA helicase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0013882
Physical Location & Seq
Reverse (-)
56043336 .. 56046800
3465 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0422200.1

Sequence Viewer

Length: 1197 bp
ATGGCCGAACCAGGTGGCTCTGACAAGAGGAGTTGGTGCTCGGTGCCTGAGAAGTTTCAGCTTCATGGAGCCATGTTGGCTTTGCAGTTCGGCTATGCCGGTTTCCATGTCGTCTCTAGATTTGCTCTCAATATGGGCATTTCTAAGCTTGTCTTTCCCGTTTACCGGAACATCATCGCTTTGCTTCTCCTCCTGCCCTTTGCCTACTTTCTGGAAAAGAAGGACAGGCCTCCGATCAATCTCAACTTTCTCGTTCAGTTCTTTTGCCTTGCGCTTATCGGAATAACAGCAAACCAAGGATTCTACTTGCTGGGATTAGACAACACATCACCCACCTTTGCTTCCGCTATACAAAACTCCGTCCCAGCCATTACCTTTCTCATGGCAGTCATACTCAGAATCGAGCAAGTAAGACTAAACCGCAAGGACGGTATTGCAAAGGTTGCCGGAACTATTTTCTGTGTGGCTGGAGCATCAGTGATTACTCTATACAAAGGTCCGGCCATATACAGCCCAACACCACCACTGCAGACGATGATGATGAGCAGTGCCTCATCATCAGTATCAATGTCGAGTTTCACTACGAGCGCCATGTCAGTACTTGGTGATGCAAAGGGTAAGAGCTGGACTCTAGGTTGCCTCTACCTGATCGGCCATTGCCTCTCGTGGTCCGCCTGGCTCGTCCTGCAAAGCCCGGTTCTCAAGAAGTACCCGGCCCGGCTCTCTGTCACCTCCTACACTTGTTTCTTTGGTCTAATTCAGTTCATCATTATCGCTGCGGTTTTCGAGAGAGACGCTCAGGCTTGGATCTTCCACAGTGGTGGAGAAGCCTTCAGCATCCTCTATGCGGGAGTGGTTGCATCAGGGATTGCATTCGCTGTACAGATATGGTGCATCGACAGAGGGGGCCCTGTTTTTGTAGCTGTATATCAACCTGTTCAGACTCTTGTTGTCGCTATCATGGCCTCGGTTGCTTTAGGCGAGGAGTTCTACTTGGGAGGGATCATCGGAGCGGTGCTGATCATAGTGGGACTGTACGCGGTGTTGTGGGGTAAAAGTGAAGAAAGGAAGTTTGCTCAGGCAAGAGTTCCAATTCAGTCGACTCCTAGTGACAGTGTGCACTCAAACAACAGGAAAAGCCAAACCAAGACGTCCCTCACTCAACCACTCATTCCTCCATCCACCGAAAATGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001047 GO:0001067 GO:0001503 GO:0001817 GO:0001819 GO:0002151 GO:0002791 GO:0002793 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003723 GO:0003724 GO:0003725 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006355 GO:0006357 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0008186 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010501 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010638 GO:0014070 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019899 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031330 GO:0032204 GO:0032206 GO:0032479 GO:0032481 GO:0032501 GO:0032647 GO:0032727 GO:0032879 GO:0032880 GO:0033043 GO:0033044 GO:0034641 GO:0042221 GO:0042623 GO:0042826 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043330 GO:0043331 GO:0043487 GO:0043489 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050707 GO:0050708 GO:0050714 GO:0050715 GO:0050789 GO:0050794 GO:0050896 GO:0051046 GO:0051047 GO:0051049 GO:0051050 GO:0051052 GO:0051054 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051222 GO:0051223 GO:0051239 GO:0051240 GO:0051252 GO:0051253 GO:0051254 GO:0051704 GO:0051707 GO:0051880 GO:0060255 GO:0065007 GO:0065008 GO:0070034 GO:0070035 GO:0070201 GO:0071704 GO:0080090 GO:0090087 GO:0090304 GO:0090669 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1902369 GO:1902680 GO:1902739 GO:1902741 GO:1903506 GO:1903508 GO:1903530 GO:1903532 GO:1904951 GO:1990837 GO:2000112 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DEAD HA2 Helicase_C OB_NTP_bind dsrm

Protein Analysis

398

Amino Acids

43.15

Weight (kDa)

9.26

Isoelectric Point (pI)

44.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EamA PF00892 25 - 162 1.2e-13 EamA-like transporter family
EamA PF00892 211 - 349 2e-16 EamA-like transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013882)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48650 AT1G48650
fragaria_vesca FvH4_5g16860
malus_domestica MD06G1222500.v1.1 MD14G1231600.v1.1
prunus_persica Prupe.5G227100_v2.0.a1
pyrus_communis pycom06g19810 pycom06g19820 pycom14g19280
rosa_chinensis RchiOBHm_Chr7g0179211
rosa_laevigata RLG00000005374
rosa_multiflora Rmu_sc0009798.1_g000005 Rmu_sc0021799.1_g000001
rosa_roxburghii Rroxscaffold_3G00274220
rosa_rugosa Rorug06G0422200
rosa_samantha Rh7BG021500
rosa_wichuraiana Rw7G001770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1154
AccB1I GGYRCC 1 cut(s) 43
AccBSI CCGCTC 1 cut(s) 1013
AccI GTMKAC 1 cut(s) 1100
AccII CGCG 1 cut(s) 1040
AciI CCGC 7 cut(s) 345, 421, 672, 779, 848, 1013, 1040
AclWI GGATC 2 cut(s) 815, 1010
AcoI YGGCCR 3 cut(s) 3, 501, 652
AcuI CTGAAG 1 cut(s) 817
AcyI GRCGYC 1 cut(s) 1151
AfaI GTAC 4 cut(s) 600, 710, 882, 1037
AfiI CCNNNNNNNGG 2 cut(s) 165, 847
AjnI CCWGG 2 cut(s) 10, 674
AleI CACNNNNGTG 1 cut(s) 819
AluBI AGCT 4 cut(s) 61, 148, 624, 923
AluI AGCT 4 cut(s) 61, 148, 624, 923
Alw21I GWGCWC 2 cut(s) 41, 1122
Alw26I GTCTC 2 cut(s) 118, 786
Alw44I GTGCAC 1 cut(s) 1118
AlwI GGATC 2 cut(s) 815, 1010
AoxI GGCC 7 cut(s) 3, 227, 501, 652, 714, 907, 963
ApaI GGGCCC 1 cut(s) 911
ApaLI GTGCAC 1 cut(s) 1118
ApeKI GCWGC 1 cut(s) 776
AspLEI GCGC 2 cut(s) 274, 590
AspS9I GGNCC 5 cut(s) 497, 669, 715, 907, 908
AsuC2I CCSGG 3 cut(s) 695, 713, 718
AsuHPI GGTGA 3 cut(s) 321, 617, 721
AvaII GGWCC 2 cut(s) 497, 669
BaeGI GKGCMC 2 cut(s) 911, 1122
BanI GGYRCC 1 cut(s) 43
BanII GRGCYC 1 cut(s) 911
BauI CACGAG 1 cut(s) 664
Bbv12I GWGCWC 2 cut(s) 41, 1122
BbvI GCAGC 1 cut(s) 763
BccI CCATC 1 cut(s) 1186
BciT130I CCWGG 2 cut(s) 12, 676
BclI TGATCA 1 cut(s) 1020
BcnI CCSGG 3 cut(s) 695, 713, 718
BcoDI GTCTC 2 cut(s) 118, 786
BfaI CTAG 3 cut(s) 117, 632, 1107
BfmI CTRYAG 1 cut(s) 527
BfoI RGCGCY 1 cut(s) 591
BglI GCCNNNNNGGC 1 cut(s) 77
BisI GCNGC 1 cut(s) 777
BlsI GCNGC 1 cut(s) 778
BmcAI AGTACT 1 cut(s) 600
Bme1390I CCNGG 5 cut(s) 12, 676, 695, 713, 718
Bme18I GGWCC 2 cut(s) 497, 669
BmgT120I GGNCC 5 cut(s) 497, 669, 715, 907, 908
BmiI GGNNCC 4 cut(s) 45, 70, 908, 909
BmrFI CCNGG 5 cut(s) 12, 676, 695, 713, 718
BmsI GCATC 5 cut(s) 482, 598, 846, 869, 903
BplI GAGNNNNNCTC 4 cut(s) 613, 645, 781, 813
BpmI CTGGAG 1 cut(s) 489
Bpu10I CCTNAGC 2 cut(s) 798, 1077
BpuEI CTTGAG 1 cut(s) 686
BpuMI CCSGG 3 cut(s) 695, 713, 718
BsaHI GRCGYC 1 cut(s) 1151
BsaJI CCNNGG 2 cut(s) 295, 966
BsaWI WCCGGW 1 cut(s) 165
BsaXI ACNNNNNCTCC 2 cut(s) 462, 492
Bsc4I CCNNNNNNNGG 2 cut(s) 165, 847
Bse118I RCCGGY 1 cut(s) 98
Bse3DI GCAATG 1 cut(s) 655
BseBI CCWGG 2 cut(s) 12, 676
BseDI CCNNGG 2 cut(s) 295, 966
BseGI GGATG 2 cut(s) 837, 1178
BseLI CCNNNNNNNGG 2 cut(s) 165, 847
BseMI GCAATG 1 cut(s) 655
BseMII CTCAG 4 cut(s) 39, 409, 812, 1091
BseRI GAGGAG 3 cut(s) 43, 179, 998
BseSI GKGCMC 2 cut(s) 911, 1122
BseXI GCAGC 1 cut(s) 763
BseYI CCCAGC 2 cut(s) 310, 364
Bsh1236I CGCG 1 cut(s) 1040
BshFI GGCC 7 cut(s) 5, 229, 503, 654, 716, 909, 965
BshNI GGYRCC 1 cut(s) 43
BsiHKAI GWGCWC 2 cut(s) 41, 1122
BsiSI CCGG 7 cut(s) 99, 166, 447, 500, 695, 713, 718
BslFI GGGAC 3 cut(s) 347, 1044, 1138
BslI CCNNNNNNNGG 2 cut(s) 165, 847
BsmAI GTCTC 2 cut(s) 118, 786
BsmBI CGTCTC 2 cut(s) 118, 786
BsmFI GGGAC 3 cut(s) 347, 1044, 1138
BsmI GAATGC 1 cut(s) 872
BsnI GGCC 7 cut(s) 5, 229, 503, 654, 716, 909, 965
Bsp120I GGGCCC 1 cut(s) 907
Bsp1286I GDGCHC 3 cut(s) 41, 911, 1122
Bsp1407I TGTACA 1 cut(s) 880
Bsp143I GATC 5 cut(s) 234, 648, 807, 1002, 1020
BspACI CCGC 7 cut(s) 345, 421, 672, 779, 848, 1013, 1040
BspANI GGCC 7 cut(s) 5, 229, 503, 654, 716, 909, 965
BspCNI CTCAG 4 cut(s) 40, 408, 811, 1090
BspFNI CGCG 1 cut(s) 1040
BspLI GGNNCC 4 cut(s) 45, 70, 908, 909
BspMAI CTGCAG 1 cut(s) 531
BspPI GGATC 2 cut(s) 815, 1010
BspT107I GGYRCC 1 cut(s) 43
BsrBI CCGCTC 1 cut(s) 1013
BsrDI GCAATG 1 cut(s) 655
BsrFI RCCGGY 1 cut(s) 98
BsrGI TGTACA 1 cut(s) 880
BssAI RCCGGY 1 cut(s) 98
BssECI CCNNGG 2 cut(s) 295, 966
BssMI GATC 5 cut(s) 234, 648, 807, 1002, 1020
BssNI GRCGYC 1 cut(s) 1151
BssSI CACGAG 1 cut(s) 664
BssT1I CCWWGG 1 cut(s) 295
Bst2BI CACGAG 1 cut(s) 664
Bst2UI CCWGG 2 cut(s) 12, 676
Bst4CI ACNGT 4 cut(s) 431, 818, 1035, 1115
BstACI GRCGYC 1 cut(s) 1151
BstAPI GCANNNNNTGC 1 cut(s) 443
BstAUI TGTACA 1 cut(s) 880
BstDEI CTNAG 5 cut(s) 48, 144, 395, 798, 1077
BstF5I GGATG 2 cut(s) 837, 1178
BstFNI CGCG 1 cut(s) 1040
BstH2I RGCGCY 1 cut(s) 591
BstHHI GCGC 2 cut(s) 274, 590
BstKTI GATC 5 cut(s) 237, 651, 810, 1005, 1023
BstMAI GTCTC 2 cut(s) 118, 786
BstMBI GATC 5 cut(s) 234, 648, 807, 1002, 1020
BstMWI GCNNNNNNNGC 5 cut(s) 77, 443, 685, 962, 971
BstNI CCWGG 2 cut(s) 12, 676
BstSCI CCNGG 5 cut(s) 10, 674, 693, 711, 716
BstSFI CTRYAG 1 cut(s) 527
BstSLI GKGCMC 2 cut(s) 911, 1122
BstUI CGCG 1 cut(s) 1040
BstV1I GCAGC 1 cut(s) 763
BstX2I RGATCY 1 cut(s) 807
BstXI CCANNNNNNTGG 1 cut(s) 821
BstYI RGATCY 1 cut(s) 807
BsuRI GGCC 7 cut(s) 5, 229, 503, 654, 716, 909, 965
BtgZI GCGATG 1 cut(s) 160
BtsCI GGATG 2 cut(s) 837, 1178
BtsI GCAGTG 2 cut(s) 524, 553
BtsIMutI CAGTG 5 cut(s) 483, 524, 553, 823, 1120
CfoI GCGC 2 cut(s) 274, 590
Cfr10I RCCGGY 1 cut(s) 98
Cfr13I GGNCC 5 cut(s) 497, 669, 715, 907, 908
CseI GACGC 1 cut(s) 803
CsiI ACCWGGT 1 cut(s) 10
Csp6I GTAC 4 cut(s) 599, 709, 881, 1036
CviAII CATG 6 cut(s) 65, 73, 107, 382, 592, 961
CviQI GTAC 4 cut(s) 599, 709, 881, 1036
DdeI CTNAG 5 cut(s) 48, 144, 395, 798, 1077
DpnI GATC 5 cut(s) 236, 650, 809, 1004, 1022
DpnII GATC 5 cut(s) 234, 648, 807, 1002, 1020
EaeI YGGCCR 3 cut(s) 3, 501, 652
EciI GGCGGA 1 cut(s) 661
Eco130I CCWWGG 1 cut(s) 295
Eco147I AGGCCT 1 cut(s) 229
Eco24I GRGCYC 1 cut(s) 911
Eco47I GGWCC 2 cut(s) 497, 669
Eco57I CTGAAG 1 cut(s) 817
EcoO109I RGGNCCY 2 cut(s) 907, 908
EcoRII CCWGG 2 cut(s) 10, 674
EcoT14I CCWWGG 1 cut(s) 295
EcoT38I GRGCYC 1 cut(s) 911
ErhI CCWWGG 1 cut(s) 295
Esp3I CGTCTC 2 cut(s) 118, 786
FaeI CATG 6 cut(s) 68, 76, 110, 385, 595, 964
FalI AAGNNNNNCTT 2 cut(s) 137, 169
FaqI GGGAC 3 cut(s) 347, 1044, 1138
FatI CATG 6 cut(s) 64, 72, 106, 381, 591, 960
FauI CCCGC 1 cut(s) 841
FbaI TGATCA 1 cut(s) 1020
FblI GTMKAC 1 cut(s) 1100
Fnu4HI GCNGC 1 cut(s) 777
FokI GGATG 2 cut(s) 824, 1165
FriOI GRGCYC 1 cut(s) 911
Fsp4HI GCNGC 1 cut(s) 777
FspBI CTAG 3 cut(s) 117, 632, 1107
GlaI GCGC 2 cut(s) 273, 589
GluI GCNGC 1 cut(s) 777
GsaI CCCAGC 2 cut(s) 314, 368
GsuI CTGGAG 1 cut(s) 489
HaeII RGCGCY 1 cut(s) 591
HaeIII GGCC 7 cut(s) 5, 229, 503, 654, 716, 909, 965
HapII CCGG 7 cut(s) 99, 166, 447, 500, 695, 713, 718
HgaI GACGC 1 cut(s) 803
HhaI GCGC 2 cut(s) 274, 590
Hin1I GRCGYC 1 cut(s) 1151
Hin1II CATG 6 cut(s) 68, 76, 110, 385, 595, 964
Hin6I GCGC 2 cut(s) 272, 588
HinP1I GCGC 2 cut(s) 272, 588
HincII GTYRAC 1 cut(s) 1101
HindII GTYRAC 1 cut(s) 1101
HindIII AAGCTT 1 cut(s) 146
HinfI GANTC 5 cut(s) 300, 399, 628, 943, 1102
HpaII CCGG 7 cut(s) 99, 166, 447, 500, 695, 713, 718
HphI GGTGA 3 cut(s) 321, 617, 721
Hpy166II GTNNAC 3 cut(s) 163, 1101, 1120
Hpy188I TCNGA 7 cut(s) 22, 234, 281, 398, 942, 1010, 1196
Hpy188III TCNNGA 4 cut(s) 117, 212, 703, 787
Hpy8I GTNNAC 3 cut(s) 163, 1101, 1120
HpyAV CCTTC 2 cut(s) 214, 841
HpyCH4III ACNGT 4 cut(s) 431, 818, 1035, 1115
HpyCH4IV ACGT 1 cut(s) 1151
HpyCH4V TGCA 9 cut(s) 85, 437, 529, 611, 688, 860, 872, 894, 1120
HpyF10VI GCNNNNNNNGC 5 cut(s) 77, 443, 685, 962, 971
HpyF3I CTNAG 5 cut(s) 48, 144, 395, 798, 1077
HpySE526I ACGT 1 cut(s) 1151
Hsp92I GRCGYC 1 cut(s) 1151
Hsp92II CATG 6 cut(s) 68, 76, 110, 385, 595, 964
HspAI GCGC 2 cut(s) 272, 588
Ksp22I TGATCA 1 cut(s) 1020
Kzo9I GATC 5 cut(s) 234, 648, 807, 1002, 1020
LmnI GCTCC 3 cut(s) 68, 470, 1010
Lsp1109I GCAGC 1 cut(s) 763
LweI GCATC 5 cut(s) 482, 598, 846, 869, 903
MabI ACCWGGT 1 cut(s) 10
MaeI CTAG 3 cut(s) 117, 632, 1107
MaeII ACGT 1 cut(s) 1151
MaeIII GTNAC 2 cut(s) 727, 1109
MalI GATC 5 cut(s) 236, 650, 809, 1004, 1022
MbiI CCGCTC 1 cut(s) 1013
MboI GATC 5 cut(s) 234, 648, 807, 1002, 1020
MboII GAAGA 2 cut(s) 802, 1073
MflI RGATCY 1 cut(s) 807
MhlI GDGCHC 3 cut(s) 41, 911, 1122
MluCI AATT 2 cut(s) 756, 1092
MlyI GAGTC 3 cut(s) 622, 937, 1096
MslI CAYNNNNRTG 1 cut(s) 819
MspI CCGG 7 cut(s) 99, 166, 447, 500, 695, 713, 718
MspR9I CCNGG 5 cut(s) 12, 676, 695, 713, 718
Mva1269I GAATGC 1 cut(s) 872
MvaI CCWGG 2 cut(s) 12, 676
MvnI CGCG 1 cut(s) 1040
MwoI GCNNNNNNNGC 5 cut(s) 77, 443, 685, 962, 971
NciI CCSGG 3 cut(s) 695, 713, 718
NdeII GATC 5 cut(s) 234, 648, 807, 1002, 1020
NlaIII CATG 6 cut(s) 68, 76, 110, 385, 595, 964
NlaIV GGNNCC 4 cut(s) 45, 70, 908, 909
NmuCI GTSAC 2 cut(s) 727, 1109
OliI CACNNNNGTG 1 cut(s) 819
PceI AGGCCT 1 cut(s) 229
PctI GAATGC 1 cut(s) 872
PfeI GAWTC 2 cut(s) 300, 399
PkrI GCNGC 1 cut(s) 778
PleI GAGTC 3 cut(s) 622, 937, 1096
PpsI GAGTC 3 cut(s) 622, 937, 1096
Psp6I CCWGG 2 cut(s) 10, 674
PspFI CCCAGC 2 cut(s) 310, 364
PspGI CCWGG 2 cut(s) 10, 674
PspN4I GGNNCC 4 cut(s) 45, 70, 908, 909
PspOMI GGGCCC 1 cut(s) 907
PspPI GGNCC 5 cut(s) 497, 669, 715, 907, 908
PstI CTGCAG 1 cut(s) 531
PsuI RGATCY 1 cut(s) 807
RsaI GTAC 4 cut(s) 600, 710, 882, 1037
RsaNI GTAC 4 cut(s) 599, 709, 881, 1036
RseI CAYNNNNRTG 1 cut(s) 819
SalI GTCGAC 1 cut(s) 1099
SatI GCNGC 1 cut(s) 777
Sau3AI GATC 5 cut(s) 234, 648, 807, 1002, 1020
Sau96I GGNCC 5 cut(s) 497, 669, 715, 907, 908
ScaI AGTACT 1 cut(s) 600
SchI GAGTC 3 cut(s) 622, 937, 1096
ScrFI CCNGG 5 cut(s) 12, 676, 695, 713, 718
SduI GDGCHC 3 cut(s) 41, 911, 1122
SexAI ACCWGGT 1 cut(s) 10
SfaNI GCATC 5 cut(s) 482, 598, 846, 869, 903
SfcI CTRYAG 1 cut(s) 527
SinI GGWCC 2 cut(s) 497, 669
SmiMI CAYNNNNRTG 1 cut(s) 819
SmlI CTYRAG 1 cut(s) 701
SmoI CTYRAG 1 cut(s) 701
Sse9I AATT 2 cut(s) 756, 1092
SseBI AGGCCT 1 cut(s) 229
SsiI CCGC 7 cut(s) 345, 421, 672, 779, 848, 1013, 1040
SspMI CTAG 3 cut(s) 117, 632, 1107
StuI AGGCCT 1 cut(s) 229
StyD4I CCNGG 5 cut(s) 10, 674, 693, 711, 716
StyI CCWWGG 1 cut(s) 295
TaaI ACNGT 4 cut(s) 431, 818, 1035, 1115
TaiI ACGT 1 cut(s) 1154
TaqI TCGA 5 cut(s) 402, 572, 786, 897, 1100
TasI AATT 2 cut(s) 756, 1092
TatI WGTACW 2 cut(s) 598, 880
TfiI GAWTC 2 cut(s) 300, 399
TscAI CASTG 5 cut(s) 483, 531, 553, 823, 1120
TseFI GTSAC 2 cut(s) 727, 1109
TseI GCWGC 1 cut(s) 776
Tsp45I GTSAC 2 cut(s) 727, 1109
TspDTI ATGAA 2 cut(s) 53, 754
TspGWI ACGGA 1 cut(s) 349
TspRI CASTG 5 cut(s) 483, 531, 553, 823, 1120
VneI GTGCAC 1 cut(s) 1118
VpaK11BI GGWCC 2 cut(s) 497, 669
XbaI TCTAGA 1 cut(s) 116
XmiI GTMKAC 1 cut(s) 1100
XspI CTAG 3 cut(s) 117, 632, 1107
ZraI GACGTC 1 cut(s) 1152
ZrmI AGTACT 1 cut(s) 600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.