Prupe.5G237700_v2.0.a1

isoform X1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
17970131 .. 17972761
2631 bp
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UTR
Exon/CDS
Intron
Prupe.5G237700.4

Sequence Viewer

Length: 1425 bp
ATGGAGGATAAAGGAGGATCACAAAATGTAAAAATTGGCAATTTTGCACTACGCCCACAGAAACCTTTGAATTGTAAACGCCGACGTCTCCCTACACTTTTAATCATAAATTATAGGGTTGGGTTAGCAGAGCTGAAGATGGAAGCAGCAGCCACGGCGAGCGTTGTCCAATCATCAATCGCGGCCTTTAGGCCTTCCAATTCAATTGGCAGATCGGGTAATTTGGCGGCCAATGGTCCCGCCGGTTTTCTGCGTTTGAGTCCTGGATTTCACTTCTCAATCAAGCACCAGTTTTCAATCTCTCAACCAAAGGTGGGTCATTGGAGAATGGGCTTTGGAAGTAGGAGATGCTTGGTCGTTAGGGCAGCAGCTGCATCTCCATCTCCGGACTCAACAGGTTCTACTTCTCCAATTGCCCCACTTCAGCTGGAGTCACCAATTGGACAGTTCCTCTCTCAGATAATGATAAGCCACCCGCATCTTGTGCCTAGTGCAGTTGAGCAGCAGCTTGAACAGCTTCAAACAGATCGCGACACTGAGCAAAAGCAGGAAGAGCCTTCTGCTTCTGGCACTGACCTCGTTTTGTACAGGAGAATTGCCGAGGTTAAGGCTACTGAAAGGAGAAAGGCTCTTGAAGAGATTTTGTACACTTTGGTGGTGCAAAAATTCATGGATGCTAATGTTTCTTTGATACCTGCCCTTACCCCATCTGCTTCAGACCTTTCTGGTCGAGTTGATACATGGCCAAGTGAAGAGGACAAGCTTGAGCAACTTCATTCACCTGAAGCCTATGAGATGATCCAGAACCACCTAGCTCTCATCCTAGGAAGTCGGTTGGGTGACTCAGCCTCTTTAGCACAGATAAGCAAACTCAGAGTTGGGCAGGTTTATGCAGCATCTGTAATGTATGGGTACTTCCTCAAGCGGGTTGACCAGAGGTTTCAGCTGGAGAAGACAGTAAAGATCCTTCCAAATGCACTGGGTGCCGAAGACAGTAATGTTCAGAAATCTGTGGGGGAGGACATGAGGCCTGGTGGTGAAGAGGAGTCTTTGCAAGCAGGGGCTTCCCATCCTGAAGTCACTTCCTGGGGTGGAGGCATCAGTCCTGGGGGTTTTGGTAATGGAATTAAGCCATCCCGCTTGCGGACCTATGTGATGTCTTTTGATGGAGAGACCCTTCATAGGTATGCAACAATTAGATCGAGAGAGGCTGTTAGCATCATTGAAAAGCACACCGAGGCATTGTTTGGAAGACCTGATATTGTCATAACACCTCAGGGGACTGTTGATTCTTCCAAGGATGATCACGTCAAAATTAGCTTTGGTGGTTTGAGGAGACTTGTTCTGGAAGCCGTGACTTTTGGTTCTTTTCTTTGGGATGTTGAGAGTTATGTGGATTCCAGGTATCATTTTGTTACAAACTGA
Functional Annotation

Protein Analysis

475

Amino Acids

51.97

Weight (kDa)

8.36

Isoelectric Point (pI)

52.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 88
Acc36I ACCTGC 2 cut(s) 703, 874
AccB1I GGYRCC 1 cut(s) 983
AccII CGCG 2 cut(s) 182, 531
AccIII TCCGGA 1 cut(s) 385
AciI CCGC 7 cut(s) 182, 227, 240, 476, 925, 1138, 1144
AclWI GGATC 3 cut(s) 25, 793, 958
AcoI YGGCCR 2 cut(s) 228, 743
AcsI RAATTY 1 cut(s) 665
AcuI CTGAAG 5 cut(s) 155, 407, 699, 804, 1095
AcyI GRCGYC 1 cut(s) 85
AdeI CACNNNGTG 1 cut(s) 983
AfaI GTAC 3 cut(s) 587, 647, 914
AfiI CCNNNNNNNGG 4 cut(s) 314, 925, 1143, 1182
AgsI TTSAA 7 cut(s) 70, 204, 297, 512, 521, 635, 1226
AjiI CACGTC 1 cut(s) 1309
AjnI CCWGG 5 cut(s) 262, 1030, 1085, 1105, 1400
AleI CACNNNNGTG 1 cut(s) 653
AluBI AGCT 9 cut(s) 133, 371, 427, 508, 517, 763, 815, 946, 1320
AluI AGCT 9 cut(s) 133, 371, 427, 508, 517, 763, 815, 946, 1320
Alw26I GTCTC 3 cut(s) 92, 1166, 1330
AlwI GGATC 3 cut(s) 25, 793, 958
AlwNI CAGNNNCTG 2 cut(s) 371, 899
Aor13HI TCCGGA 1 cut(s) 385
AoxI GGCC 5 cut(s) 183, 191, 228, 743, 1028
ApeKI GCWGC 8 cut(s) 146, 149, 365, 368, 371, 502, 505, 893
ApoI RAATTY 1 cut(s) 665
Asp700I GAANNNNTTC 1 cut(s) 516
AspA2I CCTAGG 1 cut(s) 823
AspS9I GGNCC 2 cut(s) 236, 1146
AsuHPI GGTGA 4 cut(s) 426, 771, 851, 1049
AvaII GGWCC 2 cut(s) 236, 1146
AvrII CCTAGG 1 cut(s) 823
AxyI CCTNAGG 1 cut(s) 1275
BalI TGGCCA 1 cut(s) 745
BanI GGYRCC 1 cut(s) 983
BarI GAAGNNNNNNTAC 4 cut(s) 899, 931, 951, 983
BbsI GAAGAC 3 cut(s) 959, 996, 1258
BbvI GCAGC 8 cut(s) 158, 161, 358, 377, 380, 514, 517, 905
BccI CCATC 6 cut(s) 133, 388, 715, 1077, 1141, 1160
BceAI ACGGC 2 cut(s) 171, 1337
BcgI CGANNNNNNTGC 2 cut(s) 559, 593
BciT130I CCWGG 5 cut(s) 264, 1032, 1087, 1107, 1402
BclI TGATCA 1 cut(s) 1303
BcoDI GTCTC 3 cut(s) 92, 1166, 1330
BfaI CTAG 3 cut(s) 489, 812, 824
BfuAI ACCTGC 2 cut(s) 703, 874
BlnI CCTAGG 1 cut(s) 823
Bme1390I CCNGG 5 cut(s) 264, 1032, 1087, 1107, 1402
Bme18I GGWCC 2 cut(s) 236, 1146
BmgBI CACGTC 1 cut(s) 1309
BmgT120I GGNCC 2 cut(s) 236, 1146
BmiI GGNNCC 2 cut(s) 238, 985
BmrFI CCNGG 5 cut(s) 264, 1032, 1087, 1107, 1402
BmrI ACTGGG 1 cut(s) 989
BmsI GCATC 7 cut(s) 338, 383, 487, 664, 905, 1107, 1227
BmuI ACTGGG 1 cut(s) 989
BpiI GAAGAC 3 cut(s) 959, 996, 1258
BplI GAGNNNNNCTC 2 cut(s) 613, 645
BpmI CTGGAG 2 cut(s) 449, 968
BpuEI CTTGAG 2 cut(s) 785, 905
BsaHI GRCGYC 1 cut(s) 85
BsaI GGTCTC 1 cut(s) 1166
BsaJI CCNNGG 7 cut(s) 153, 600, 823, 1086, 1106, 1236, 1296
BsaWI WCCGGW 1 cut(s) 385
Bsc4I CCNNNNNNNGG 4 cut(s) 314, 925, 1143, 1182
Bse118I RCCGGY 1 cut(s) 242
Bse1I ACTGG 2 cut(s) 289, 984
Bse21I CCTNAGG 1 cut(s) 1275
BseAI TCCGGA 1 cut(s) 385
BseBI CCWGG 5 cut(s) 264, 1032, 1087, 1107, 1402
BseDI CCNNGG 7 cut(s) 153, 600, 823, 1086, 1106, 1236, 1296
BseGI GGATG 6 cut(s) 679, 819, 1069, 1133, 1306, 1384
BseLI CCNNNNNNNGG 4 cut(s) 314, 925, 1143, 1182
BseMII CTCAG 5 cut(s) 470, 528, 858, 886, 1289
BseNI ACTGG 2 cut(s) 289, 984
BseRI GAGGAG 2 cut(s) 1058, 1348
BseXI GCAGC 8 cut(s) 158, 161, 358, 377, 380, 514, 517, 905
BsgI GTGCAG 1 cut(s) 513
Bsh1236I CGCG 2 cut(s) 182, 531
BshFI GGCC 5 cut(s) 185, 193, 230, 745, 1030
BshNI GGYRCC 1 cut(s) 983
BsiSI CCGG 2 cut(s) 243, 386
BslFI GGGAC 2 cut(s) 222, 1294
BslI CCNNNNNNNGG 4 cut(s) 314, 925, 1143, 1182
BsmAI GTCTC 3 cut(s) 92, 1166, 1330
BsmBI CGTCTC 1 cut(s) 92
BsmFI GGGAC 2 cut(s) 222, 1294
BsnI GGCC 5 cut(s) 185, 193, 230, 745, 1030
Bso31I GGTCTC 1 cut(s) 1166
Bsp13I TCCGGA 1 cut(s) 385
Bsp1407I TGTACA 2 cut(s) 585, 645
Bsp143I GATC 7 cut(s) 17, 212, 526, 798, 963, 1199, 1303
Bsp68I TCGCGA 1 cut(s) 531
BspACI CCGC 7 cut(s) 182, 227, 240, 476, 925, 1138, 1144
BspANI GGCC 5 cut(s) 185, 193, 230, 745, 1030
BspCNI CTCAG 5 cut(s) 469, 529, 857, 885, 1288
BspEI TCCGGA 1 cut(s) 385
BspFNI CGCG 2 cut(s) 182, 531
BspLI GGNNCC 2 cut(s) 238, 985
BspMI ACCTGC 2 cut(s) 703, 874
BspPI GGATC 3 cut(s) 25, 793, 958
BspQI GCTCTTC 1 cut(s) 546
BspT107I GGYRCC 1 cut(s) 983
BspTNI GGTCTC 1 cut(s) 1166
BsrFI RCCGGY 1 cut(s) 242
BsrGI TGTACA 2 cut(s) 585, 645
BsrI ACTGG 2 cut(s) 289, 984
BssAI RCCGGY 1 cut(s) 242
BssECI CCNNGG 7 cut(s) 153, 600, 823, 1086, 1106, 1236, 1296
BssMI GATC 7 cut(s) 17, 212, 526, 798, 963, 1199, 1303
BssNI GRCGYC 1 cut(s) 85
BssT1I CCWWGG 2 cut(s) 823, 1296
Bst2UI CCWGG 5 cut(s) 264, 1032, 1087, 1107, 1402
Bst4CI ACNGT 4 cut(s) 447, 958, 995, 1285
Bst6I CTCTTC 4 cut(s) 546, 630, 747, 1035
BstACI GRCGYC 1 cut(s) 85
BstAPI GCANNNNNTGC 3 cut(s) 371, 484, 983
BstAUI TGTACA 2 cut(s) 585, 645
BstC8I GCNNGC 3 cut(s) 160, 1056, 1142
BstDEI CTNAG 5 cut(s) 456, 537, 844, 872, 1275
BstDSI CCRYGG 1 cut(s) 153
BstF5I GGATG 6 cut(s) 679, 819, 1069, 1133, 1306, 1384
BstFNI CGCG 2 cut(s) 182, 531
BstKTI GATC 7 cut(s) 20, 215, 529, 801, 966, 1202, 1306
BstMAI GTCTC 3 cut(s) 92, 1166, 1330
BstMBI GATC 7 cut(s) 17, 212, 526, 798, 963, 1199, 1303
BstMWI GCNNNNNNNGC 7 cut(s) 155, 371, 484, 514, 553, 854, 983
BstNI CCWGG 5 cut(s) 264, 1032, 1087, 1107, 1402
BstSCI CCNGG 5 cut(s) 262, 1030, 1085, 1105, 1400
BstUI CGCG 2 cut(s) 182, 531
BstV1I GCAGC 8 cut(s) 158, 161, 358, 377, 380, 514, 517, 905
BstV2I GAAGAC 3 cut(s) 959, 996, 1258
BstX2I RGATCY 1 cut(s) 963
BstYI RGATCY 1 cut(s) 963
Bsu36I CCTNAGG 1 cut(s) 1275
BsuRI GGCC 5 cut(s) 185, 193, 230, 745, 1030
BtgI CCRYGG 1 cut(s) 153
BtrI CACGTC 1 cut(s) 1309
BtsCI GGATG 6 cut(s) 679, 819, 1069, 1133, 1306, 1384
BtsIMutI CAGTG 3 cut(s) 534, 570, 977
BtuMI TCGCGA 1 cut(s) 531
BveI ACCTGC 2 cut(s) 703, 874
Cac8I GCNNGC 3 cut(s) 160, 1056, 1142
CaiI CAGNNNCTG 2 cut(s) 371, 899
Cfr10I RCCGGY 1 cut(s) 242
Cfr13I GGNCC 2 cut(s) 236, 1146
Csp6I GTAC 3 cut(s) 586, 646, 913
CviAII CATG 3 cut(s) 670, 741, 1024
CviQI GTAC 3 cut(s) 586, 646, 913
DdeI CTNAG 5 cut(s) 456, 537, 844, 872, 1275
DpnI GATC 7 cut(s) 19, 214, 528, 800, 965, 1201, 1305
DpnII GATC 7 cut(s) 17, 212, 526, 798, 963, 1199, 1303
DraIII CACNNNGTG 1 cut(s) 983
EaeI YGGCCR 2 cut(s) 228, 743
Eam1104I CTCTTC 4 cut(s) 546, 630, 747, 1035
EarI CTCTTC 4 cut(s) 546, 630, 747, 1035
Eco130I CCWWGG 2 cut(s) 823, 1296
Eco147I AGGCCT 2 cut(s) 193, 1030
Eco31I GGTCTC 1 cut(s) 1166
Eco47I GGWCC 2 cut(s) 236, 1146
Eco57I CTGAAG 5 cut(s) 155, 407, 699, 804, 1095
Eco81I CCTNAGG 1 cut(s) 1275
EcoRII CCWGG 5 cut(s) 262, 1030, 1085, 1105, 1400
EcoT14I CCWWGG 2 cut(s) 823, 1296
ErhI CCWWGG 2 cut(s) 823, 1296
Esp3I CGTCTC 1 cut(s) 92
FaeI CATG 3 cut(s) 673, 744, 1027
FaqI GGGAC 2 cut(s) 222, 1294
FatI CATG 3 cut(s) 669, 740, 1023
FauI CCCGC 4 cut(s) 247, 483, 918, 1145
FbaI TGATCA 1 cut(s) 1303
FokI GGATG 6 cut(s) 686, 806, 1056, 1120, 1313, 1391
FspBI CTAG 3 cut(s) 489, 812, 824
GsuI CTGGAG 2 cut(s) 449, 968
HaeIII GGCC 5 cut(s) 185, 193, 230, 745, 1030
HapII CCGG 2 cut(s) 243, 386
Hin1I GRCGYC 1 cut(s) 85
Hin1II CATG 3 cut(s) 673, 744, 1027
HincII GTYRAC 1 cut(s) 931
HindII GTYRAC 1 cut(s) 931
HindIII AAGCTT 1 cut(s) 761
HinfI GANTC 7 cut(s) 259, 389, 431, 842, 1046, 1289, 1397
HpaII CCGG 2 cut(s) 243, 386
HphI GGTGA 4 cut(s) 426, 771, 851, 1049
Hpy166II GTNNAC 3 cut(s) 77, 648, 931
Hpy188I TCNGA 4 cut(s) 459, 718, 875, 1005
Hpy188III TCNNGA 7 cut(s) 386, 530, 632, 802, 1073, 1203, 1346
Hpy8I GTNNAC 3 cut(s) 77, 648, 931
Hpy99I CGWCG 1 cut(s) 87
HpyAV CCTTC 4 cut(s) 204, 567, 977, 1187
HpyCH4III ACNGT 4 cut(s) 447, 958, 995, 1285
HpyCH4IV ACGT 2 cut(s) 85, 1308
HpyCH4V TGCA 8 cut(s) 47, 374, 494, 661, 893, 977, 1054, 1190
HpyF10VI GCNNNNNNNGC 7 cut(s) 155, 371, 484, 514, 553, 854, 983
HpyF3I CTNAG 5 cut(s) 456, 537, 844, 872, 1275
HpySE526I ACGT 2 cut(s) 85, 1308
Hsp92I GRCGYC 1 cut(s) 85
Hsp92II CATG 3 cut(s) 673, 744, 1027
Kpn2I TCCGGA 1 cut(s) 385
Ksp22I TGATCA 1 cut(s) 1303
Kzo9I GATC 7 cut(s) 17, 212, 526, 798, 963, 1199, 1303
LguI GCTCTTC 1 cut(s) 546
Lsp1109I GCAGC 8 cut(s) 158, 161, 358, 377, 380, 514, 517, 905
LweI GCATC 7 cut(s) 338, 383, 487, 664, 905, 1107, 1227
MaeI CTAG 3 cut(s) 489, 812, 824
MaeII ACGT 2 cut(s) 85, 1308
MaeIII GTNAC 5 cut(s) 432, 839, 1078, 1354, 1414
MalI GATC 7 cut(s) 19, 214, 528, 800, 965, 1201, 1305
MboI GATC 7 cut(s) 17, 212, 526, 798, 963, 1199, 1303
MboII GAAGA 9 cut(s) 148, 563, 647, 764, 964, 1001, 1052, 1263, 1284
MfeI CAATTG 3 cut(s) 204, 411, 438
MflI RGATCY 1 cut(s) 963
MlsI TGGCCA 1 cut(s) 745
MluNI TGGCCA 1 cut(s) 745
MlyI GAGTC 5 cut(s) 268, 383, 440, 836, 1055
Mox20I TGGCCA 1 cut(s) 745
MroI TCCGGA 1 cut(s) 385
MroXI GAANNNNTTC 1 cut(s) 516
MscI TGGCCA 1 cut(s) 745
MseI TTAA 3 cut(s) 101, 606, 1128
MslI CAYNNNNRTG 2 cut(s) 653, 1185
Msp20I TGGCCA 1 cut(s) 745
MspA1I CMGCKG 3 cut(s) 371, 427, 946
MspI CCGG 2 cut(s) 243, 386
MspR9I CCNGG 5 cut(s) 264, 1032, 1087, 1107, 1402
MunI CAATTG 3 cut(s) 204, 411, 438
MvaI CCWGG 5 cut(s) 264, 1032, 1087, 1107, 1402
MvnI CGCG 2 cut(s) 182, 531
MwoI GCNNNNNNNGC 7 cut(s) 155, 371, 484, 514, 553, 854, 983
NdeII GATC 7 cut(s) 17, 212, 526, 798, 963, 1199, 1303
NlaIII CATG 3 cut(s) 673, 744, 1027
NlaIV GGNNCC 2 cut(s) 238, 985
NmeAIII GCCGAG 1 cut(s) 625
NmuCI GTSAC 4 cut(s) 432, 839, 1078, 1354
NruI TCGCGA 1 cut(s) 531
OliI CACNNNNGTG 1 cut(s) 653
PceI AGGCCT 2 cut(s) 193, 1030
PciSI GCTCTTC 1 cut(s) 546
PdmI GAANNNNTTC 1 cut(s) 516
PfeI GAWTC 2 cut(s) 1289, 1397
PfoI TCCNGGA 1 cut(s) 262
PleI GAGTC 5 cut(s) 267, 383, 439, 836, 1054
PpsI GAGTC 5 cut(s) 267, 383, 439, 836, 1054
Psp6I CCWGG 5 cut(s) 262, 1030, 1085, 1105, 1400
PspGI CCWGG 5 cut(s) 262, 1030, 1085, 1105, 1400
PspN4I GGNNCC 2 cut(s) 238, 985
PspPI GGNCC 2 cut(s) 236, 1146
PstNI CAGNNNCTG 2 cut(s) 371, 899
PsuI RGATCY 1 cut(s) 963
PvuII CAGCTG 3 cut(s) 371, 427, 946
RruI TCGCGA 1 cut(s) 531
RsaI GTAC 3 cut(s) 587, 647, 914
RsaNI GTAC 3 cut(s) 586, 646, 913
RseI CAYNNNNRTG 2 cut(s) 653, 1185
SapI GCTCTTC 1 cut(s) 546
SaqAI TTAA 3 cut(s) 101, 606, 1128
Sau3AI GATC 7 cut(s) 17, 212, 526, 798, 963, 1199, 1303
Sau96I GGNCC 2 cut(s) 236, 1146
SchI GAGTC 5 cut(s) 268, 383, 440, 836, 1055
ScrFI CCNGG 5 cut(s) 264, 1032, 1087, 1107, 1402
SfaNI GCATC 7 cut(s) 338, 383, 487, 664, 905, 1107, 1227
SinI GGWCC 2 cut(s) 236, 1146
SmiMI CAYNNNNRTG 2 cut(s) 653, 1185
SmlI CTYRAG 2 cut(s) 764, 920
SmoI CTYRAG 2 cut(s) 764, 920
SseBI AGGCCT 2 cut(s) 193, 1030
SsiI CCGC 7 cut(s) 182, 227, 240, 476, 925, 1138, 1144
SspMI CTAG 3 cut(s) 489, 812, 824
StuI AGGCCT 2 cut(s) 193, 1030
StyD4I CCNGG 5 cut(s) 262, 1030, 1085, 1105, 1400
StyI CCWWGG 2 cut(s) 823, 1296
TaaI ACNGT 4 cut(s) 447, 958, 995, 1285
TaiI ACGT 2 cut(s) 88, 1311
TaqI TCGA 2 cut(s) 730, 1202
TatI WGTACW 2 cut(s) 585, 645
TauI GCSGC 2 cut(s) 185, 230
TfiI GAWTC 2 cut(s) 1289, 1397
Tru1I TTAA 3 cut(s) 101, 606, 1128
Tru9I TTAA 3 cut(s) 101, 606, 1128
TscAI CASTG 3 cut(s) 541, 577, 984
TseFI GTSAC 4 cut(s) 432, 839, 1078, 1354
TseI GCWGC 8 cut(s) 146, 149, 365, 368, 371, 502, 505, 893
Tsp45I GTSAC 4 cut(s) 432, 839, 1078, 1354
TspDTI ATGAA 3 cut(s) 658, 764, 1169
TspRI CASTG 3 cut(s) 541, 577, 984
VpaK11BI GGWCC 2 cut(s) 236, 1146
XapI RAATTY 1 cut(s) 665
XmaJI CCTAGG 1 cut(s) 823
XmnI GAANNNNTTC 1 cut(s) 516
XspI CTAG 3 cut(s) 489, 812, 824
ZraI GACGTC 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.