No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G59460 AT5G59460 |
| fragaria_vesca | FvH4_3g36750 |
| malus_domestica | MD03G1088800.v1.1 MD11G1097800.v1.1 |
| prunus_persica | Prupe.6G073200_v2.0.a1 Prupe.6G073200_v2.0.a1 |
| pyrus_communis | pycom03g07040 pycom11g08260 |
| rosa_chinensis | RchiOBHm_Chr5g0065711 |
| rosa_laevigata | RLG00000035817 |
| rosa_multiflora | Rmu_sc0003636.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00015370 |
| rosa_rugosa | Rorug05G0373400 Rorug05G0373400 |
| rosa_samantha | Rh5AG432100 Rh5BG448200 Rh5CG470400 Rh5DG461700 |
| rosa_wichuraiana | Rw5G040520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 103 |
| AciI | CCGC | 1 cut(s) | 184 |
| AcuI | CTGAAG | 1 cut(s) | 411 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 167 |
| AgsI | TTSAA | 3 cut(s) | 197, 205, 484 |
| AjnI | CCWGG | 1 cut(s) | 166 |
| AluBI | AGCT | 3 cut(s) | 16, 451, 505 |
| AluI | AGCT | 3 cut(s) | 16, 451, 505 |
| Alw26I | GTCTC | 2 cut(s) | 363, 429 |
| ApeKI | GCWGC | 1 cut(s) | 257 |
| AspS9I | GGNCC | 1 cut(s) | 309 |
| AsuHPI | GGTGA | 3 cut(s) | 167, 455, 509 |
| AvaII | GGWCC | 1 cut(s) | 309 |
| BbvI | GCAGC | 1 cut(s) | 244 |
| BccI | CCATC | 3 cut(s) | 171, 217, 359 |
| BciT130I | CCWGG | 1 cut(s) | 168 |
| BciVI | GTATCC | 1 cut(s) | 284 |
| BclI | TGATCA | 2 cut(s) | 436, 445 |
| BcoDI | GTCTC | 2 cut(s) | 363, 429 |
| BfuAI | ACCTGC | 1 cut(s) | 103 |
| BfuI | GTATCC | 1 cut(s) | 284 |
| BisI | GCNGC | 1 cut(s) | 258 |
| BlsI | GCNGC | 1 cut(s) | 259 |
| Bme1390I | CCNGG | 1 cut(s) | 168 |
| Bme18I | GGWCC | 1 cut(s) | 309 |
| BmgT120I | GGNCC | 1 cut(s) | 309 |
| BmiI | GGNNCC | 1 cut(s) | 310 |
| BmrFI | CCNGG | 1 cut(s) | 168 |
| BmsI | GCATC | 1 cut(s) | 242 |
| BpmI | CTGGAG | 1 cut(s) | 189 |
| Bpu10I | CCTNAGC | 1 cut(s) | 29 |
| Bsa29I | ATCGAT | 1 cut(s) | 212 |
| BsaI | GGTCTC | 1 cut(s) | 363 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 167 |
| Bse1I | ACTGG | 1 cut(s) | 515 |
| BseBI | CCWGG | 1 cut(s) | 168 |
| BseCI | ATCGAT | 1 cut(s) | 212 |
| BseGI | GGATG | 2 cut(s) | 163, 192 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 167 |
| BseMII | CTCAG | 1 cut(s) | 74 |
| BseNI | ACTGG | 1 cut(s) | 515 |
| BseRI | GAGGAG | 1 cut(s) | 83 |
| BseXI | GCAGC | 1 cut(s) | 244 |
| BshVI | ATCGAT | 1 cut(s) | 212 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 167 |
| BsmAI | GTCTC | 2 cut(s) | 363, 429 |
| BsmI | GAATGC | 1 cut(s) | 335 |
| Bso31I | GGTCTC | 1 cut(s) | 363 |
| Bsp143I | GATC | 2 cut(s) | 436, 445 |
| BspACI | CCGC | 1 cut(s) | 184 |
| BspCNI | CTCAG | 1 cut(s) | 73 |
| BspDI | ATCGAT | 1 cut(s) | 212 |
| BspLI | GGNNCC | 1 cut(s) | 310 |
| BspMI | ACCTGC | 1 cut(s) | 103 |
| BspTNI | GGTCTC | 1 cut(s) | 363 |
| BsrI | ACTGG | 1 cut(s) | 515 |
| BssMI | GATC | 2 cut(s) | 436, 445 |
| Bst2UI | CCWGG | 1 cut(s) | 168 |
| Bst4CI | ACNGT | 1 cut(s) | 387 |
| BstC8I | GCNNGC | 4 cut(s) | 26, 100, 121, 255 |
| BstDEI | CTNAG | 3 cut(s) | 29, 60, 521 |
| BstEII | GGTNACC | 1 cut(s) | 155 |
| BstF5I | GGATG | 2 cut(s) | 163, 192 |
| BstKTI | GATC | 2 cut(s) | 439, 448 |
| BstMAI | GTCTC | 2 cut(s) | 363, 429 |
| BstMBI | GATC | 2 cut(s) | 436, 445 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 457 |
| BstNI | CCWGG | 1 cut(s) | 168 |
| BstPI | GGTNACC | 1 cut(s) | 155 |
| BstSCI | CCNGG | 1 cut(s) | 166 |
| BstV1I | GCAGC | 1 cut(s) | 244 |
| Bsu15I | ATCGAT | 1 cut(s) | 212 |
| BsuI | GTATCC | 1 cut(s) | 284 |
| BsuTUI | ATCGAT | 1 cut(s) | 212 |
| BtgZI | GCGATG | 1 cut(s) | 441 |
| BtsCI | GGATG | 2 cut(s) | 163, 192 |
| BveI | ACCTGC | 1 cut(s) | 103 |
| Cac8I | GCNNGC | 4 cut(s) | 26, 100, 121, 255 |
| Cfr13I | GGNCC | 1 cut(s) | 309 |
| ClaI | ATCGAT | 1 cut(s) | 212 |
| CviAII | CATG | 1 cut(s) | 46 |
| CviJI | RGCY | 6 cut(s) | 16, 123, 253, 451, 477, 505 |
| CviKI_1 | RGCY | 6 cut(s) | 16, 123, 253, 451, 477, 505 |
| DdeI | CTNAG | 3 cut(s) | 29, 60, 521 |
| DpnI | GATC | 2 cut(s) | 438, 447 |
| DpnII | GATC | 2 cut(s) | 436, 445 |
| EciI | GGCGGA | 1 cut(s) | 199 |
| Eco31I | GGTCTC | 1 cut(s) | 363 |
| Eco47I | GGWCC | 1 cut(s) | 309 |
| Eco57I | CTGAAG | 1 cut(s) | 411 |
| Eco91I | GGTNACC | 1 cut(s) | 155 |
| EcoO109I | RGGNCCY | 1 cut(s) | 309 |
| EcoO65I | GGTNACC | 1 cut(s) | 155 |
| EcoRII | CCWGG | 1 cut(s) | 166 |
| FaeI | CATG | 1 cut(s) | 49 |
| FaiI | YATR | 5 cut(s) | 47, 140, 146, 179, 375 |
| FatI | CATG | 1 cut(s) | 45 |
| FbaI | TGATCA | 2 cut(s) | 436, 445 |
| Fnu4HI | GCNGC | 1 cut(s) | 258 |
| FokI | GGATG | 2 cut(s) | 150, 199 |
| Fsp4HI | GCNGC | 1 cut(s) | 258 |
| GluI | GCNGC | 1 cut(s) | 258 |
| GsuI | CTGGAG | 1 cut(s) | 189 |
| Hin1II | CATG | 1 cut(s) | 49 |
| HphI | GGTGA | 3 cut(s) | 167, 455, 509 |
| Hpy188I | TCNGA | 3 cut(s) | 63, 391, 417 |
| Hpy188III | TCNNGA | 2 cut(s) | 402, 484 |
| HpyAV | CCTTC | 1 cut(s) | 146 |
| HpyCH4III | ACNGT | 1 cut(s) | 387 |
| HpyCH4V | TGCA | 1 cut(s) | 49 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 457 |
| HpyF3I | CTNAG | 3 cut(s) | 29, 60, 521 |
| Hsp92II | CATG | 1 cut(s) | 49 |
| Ksp22I | TGATCA | 2 cut(s) | 436, 445 |
| Kzo9I | GATC | 2 cut(s) | 436, 445 |
| LmnI | GCTCC | 1 cut(s) | 170 |
| Lsp1109I | GCAGC | 1 cut(s) | 244 |
| LweI | GCATC | 1 cut(s) | 242 |
| MaeIII | GTNAC | 1 cut(s) | 155 |
| MalI | GATC | 2 cut(s) | 438, 447 |
| MboI | GATC | 2 cut(s) | 436, 445 |
| MboII | GAAGA | 4 cut(s) | 85, 92, 95, 258 |
| MluCI | AATT | 2 cut(s) | 174, 352 |
| MnlI | CCTC | 2 cut(s) | 61, 322 |
| MseI | TTAA | 1 cut(s) | 38 |
| MspA1I | CMGCKG | 1 cut(s) | 451 |
| MspR9I | CCNGG | 1 cut(s) | 168 |
| Mva1269I | GAATGC | 1 cut(s) | 335 |
| MvaI | CCWGG | 1 cut(s) | 168 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 457 |
| NdeII | GATC | 2 cut(s) | 436, 445 |
| NlaIII | CATG | 1 cut(s) | 49 |
| NlaIV | GGNNCC | 1 cut(s) | 310 |
| NmuCI | GTSAC | 1 cut(s) | 155 |
| PctI | GAATGC | 1 cut(s) | 335 |
| PfoI | TCCNGGA | 1 cut(s) | 166 |
| PkrI | GCNGC | 1 cut(s) | 259 |
| PpuMI | RGGWCCY | 1 cut(s) | 309 |
| Psp5II | RGGWCCY | 1 cut(s) | 309 |
| Psp6I | CCWGG | 1 cut(s) | 166 |
| PspEI | GGTNACC | 1 cut(s) | 155 |
| PspGI | CCWGG | 1 cut(s) | 166 |
| PspN4I | GGNNCC | 1 cut(s) | 310 |
| PspPI | GGNCC | 1 cut(s) | 309 |
| PspPPI | RGGWCCY | 1 cut(s) | 309 |
| PvuII | CAGCTG | 1 cut(s) | 451 |
| SaqAI | TTAA | 1 cut(s) | 38 |
| SatI | GCNGC | 1 cut(s) | 258 |
| Sau3AI | GATC | 2 cut(s) | 436, 445 |
| Sau96I | GGNCC | 1 cut(s) | 309 |
| ScrFI | CCNGG | 1 cut(s) | 168 |
| SetI | ASST | 6 cut(s) | 18, 97, 157, 445, 453, 507 |
| SfaNI | GCATC | 1 cut(s) | 242 |
| SinI | GGWCC | 1 cut(s) | 309 |
| Sse9I | AATT | 2 cut(s) | 174, 352 |
| SsiI | CCGC | 1 cut(s) | 184 |
| StyD4I | CCNGG | 1 cut(s) | 166 |
| TaaI | ACNGT | 1 cut(s) | 387 |
| TaqI | TCGA | 1 cut(s) | 212 |
| TaqII | GACCGA | 1 cut(s) | 541 |
| TasI | AATT | 2 cut(s) | 174, 352 |
| Tru1I | TTAA | 1 cut(s) | 38 |
| Tru9I | TTAA | 1 cut(s) | 38 |
| TseFI | GTSAC | 1 cut(s) | 155 |
| TseI | GCWGC | 1 cut(s) | 257 |
| Tsp45I | GTSAC | 1 cut(s) | 155 |
| TspDTI | ATGAA | 2 cut(s) | 34, 243 |
| TspGWI | ACGGA | 1 cut(s) | 332 |
| VpaK11BI | GGWCC | 1 cut(s) | 309 |