Isovaleryl-CoA dehydrogenase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G45300 |
| fragaria_vesca | FvH4_3g32900 FvH4_3g32900 FvH4_3g32900 FvH4_3g32900 FvH4_3g32900 FvH4_3g32900 FvH4_3g32900 FvH4_3g32900 |
| malus_domestica | MD03G1116100.v1.1 |
| prunus_persica | Prupe.6G097600_v2.0.a1 Prupe.6G097600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0060041 |
| rosa_laevigata | RLG00000035340 |
| rosa_multiflora | Rmu_sc0000493.1_g000018 Rmu_sc0011881.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00020630 |
| rosa_rugosa | Rorug05G0327800 |
| rosa_samantha | Rh5AG391500 Rh5BG404100 Rh5BG404200 Rh5CG427900 Rh5DG419700 Rh6BG167300 Rh6DG152400 |
| rosa_wichuraiana | Rw5G036890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 947 |
| AccIII | TCCGGA | 1 cut(s) | 791 |
| AciI | CCGC | 3 cut(s) | 78, 608, 1098 |
| AclI | AACGTT | 1 cut(s) | 575 |
| AcoI | YGGCCR | 1 cut(s) | 895 |
| AcuI | CTGAAG | 1 cut(s) | 303 |
| AfaI | GTAC | 4 cut(s) | 553, 664, 1048, 1121 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 193, 470 |
| AflIII | ACRYGT | 2 cut(s) | 707, 942 |
| AgsI | TTSAA | 1 cut(s) | 46 |
| AhlI | ACTAGT | 1 cut(s) | 1175 |
| AjnI | CCWGG | 1 cut(s) | 831 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 738, 770 |
| AluBI | AGCT | 5 cut(s) | 296, 421, 824, 919, 1073 |
| AluI | AGCT | 5 cut(s) | 296, 421, 824, 919, 1073 |
| Alw21I | GWGCWC | 1 cut(s) | 349 |
| Alw26I | GTCTC | 2 cut(s) | 30, 338 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 326 |
| Ama87I | CYCGRG | 1 cut(s) | 653 |
| Aor13HI | TCCGGA | 1 cut(s) | 791 |
| AoxI | GGCC | 2 cut(s) | 559, 895 |
| ApeKI | GCWGC | 2 cut(s) | 17, 821 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 750 |
| AspLEI | GCGC | 1 cut(s) | 1210 |
| AspS9I | GGNCC | 3 cut(s) | 560, 827, 969 |
| AsuC2I | CCSGG | 2 cut(s) | 654, 655 |
| AsuHPI | GGTGA | 2 cut(s) | 208, 388 |
| AvaI | CYCGRG | 1 cut(s) | 653 |
| AvaII | GGWCC | 2 cut(s) | 827, 969 |
| AxyI | CCTNAGG | 1 cut(s) | 189 |
| BanII | GRGCYC | 2 cut(s) | 448, 614 |
| Bbv12I | GWGCWC | 1 cut(s) | 349 |
| BbvI | GCAGC | 2 cut(s) | 4, 833 |
| BccI | CCATC | 1 cut(s) | 509 |
| BceAI | ACGGC | 3 cut(s) | 574, 882, 1065 |
| BciT130I | CCWGG | 1 cut(s) | 833 |
| BcnI | CCSGG | 2 cut(s) | 654, 655 |
| BcoDI | GTCTC | 2 cut(s) | 30, 338 |
| BcuI | ACTAGT | 1 cut(s) | 1175 |
| BfaI | CTAG | 1 cut(s) | 1176 |
| BisI | GCNGC | 2 cut(s) | 18, 822 |
| BlsI | GCNGC | 2 cut(s) | 19, 823 |
| BmcAI | AGTACT | 2 cut(s) | 664, 1121 |
| Bme1390I | CCNGG | 3 cut(s) | 654, 655, 833 |
| Bme18I | GGWCC | 2 cut(s) | 827, 969 |
| BmeT110I | CYCGRG | 1 cut(s) | 653 |
| BmgT120I | GGNCC | 3 cut(s) | 560, 827, 969 |
| BmiI | GGNNCC | 1 cut(s) | 829 |
| BmrFI | CCNGG | 3 cut(s) | 654, 655, 833 |
| BmrI | ACTGGG | 1 cut(s) | 557 |
| BmsI | GCATC | 2 cut(s) | 372, 1135 |
| BmuI | ACTGGG | 1 cut(s) | 557 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1026, 1058 |
| BpmI | CTGGAG | 1 cut(s) | 1053 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1093 |
| BpuMI | CCSGG | 2 cut(s) | 654, 655 |
| BsaBI | GATNNNNATC | 1 cut(s) | 225 |
| BsaI | GGTCTC | 2 cut(s) | 30, 338 |
| BsaJI | CCNNGG | 3 cut(s) | 653, 831, 832 |
| BsaWI | WCCGGW | 1 cut(s) | 791 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 46, 76 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 193, 470 |
| Bse1I | ACTGG | 2 cut(s) | 563, 1132 |
| Bse21I | CCTNAGG | 1 cut(s) | 189 |
| Bse3DI | GCAATG | 2 cut(s) | 144, 459 |
| Bse8I | GATNNNNATC | 1 cut(s) | 225 |
| BseAI | TCCGGA | 1 cut(s) | 791 |
| BseBI | CCWGG | 1 cut(s) | 833 |
| BseDI | CCNNGG | 3 cut(s) | 653, 831, 832 |
| BseGI | GGATG | 2 cut(s) | 862, 1197 |
| BseJI | GATNNNNATC | 1 cut(s) | 225 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 193, 470 |
| BseMI | GCAATG | 2 cut(s) | 144, 459 |
| BseMII | CTCAG | 5 cut(s) | 113, 140, 203, 410, 683 |
| BseNI | ACTGG | 2 cut(s) | 563, 1132 |
| BseXI | GCAGC | 2 cut(s) | 4, 833 |
| BsgI | GTGCAG | 1 cut(s) | 228 |
| BshFI | GGCC | 2 cut(s) | 561, 897 |
| BsiHKAI | GWGCWC | 1 cut(s) | 349 |
| BsiHKCI | CYCGRG | 1 cut(s) | 653 |
| BsiSI | CCGG | 2 cut(s) | 654, 792 |
| BslFI | GGGAC | 1 cut(s) | 1186 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 193, 470 |
| BsmAI | GTCTC | 2 cut(s) | 30, 338 |
| BsmFI | GGGAC | 1 cut(s) | 1186 |
| BsmI | GAATGC | 1 cut(s) | 629 |
| BsnI | GGCC | 2 cut(s) | 561, 897 |
| Bso31I | GGTCTC | 2 cut(s) | 30, 338 |
| BsoBI | CYCGRG | 1 cut(s) | 653 |
| Bsp1286I | GDGCHC | 3 cut(s) | 349, 448, 614 |
| Bsp13I | TCCGGA | 1 cut(s) | 791 |
| Bsp143I | GATC | 2 cut(s) | 505, 1182 |
| BspACI | CCGC | 3 cut(s) | 78, 608, 1098 |
| BspANI | GGCC | 2 cut(s) | 561, 897 |
| BspCNI | CTCAG | 5 cut(s) | 112, 139, 202, 409, 682 |
| BspEI | TCCGGA | 1 cut(s) | 791 |
| BspLI | GGNNCC | 1 cut(s) | 829 |
| BspTNI | GGTCTC | 2 cut(s) | 30, 338 |
| BsrDI | GCAATG | 2 cut(s) | 144, 459 |
| BsrI | ACTGG | 2 cut(s) | 563, 1132 |
| BssECI | CCNNGG | 3 cut(s) | 653, 831, 832 |
| BssMI | GATC | 2 cut(s) | 505, 1182 |
| BssNAI | GTATAC | 1 cut(s) | 948 |
| Bst1107I | GTATAC | 1 cut(s) | 948 |
| Bst2UI | CCWGG | 1 cut(s) | 833 |
| Bst4CI | ACNGT | 1 cut(s) | 290 |
| Bst6I | CTCTTC | 1 cut(s) | 92 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 495 |
| BstC8I | GCNNGC | 5 cut(s) | 434, 610, 692, 846, 1080 |
| BstDEI | CTNAG | 6 cut(s) | 99, 126, 189, 396, 669, 1093 |
| BstF5I | GGATG | 2 cut(s) | 862, 1197 |
| BstHHI | GCGC | 1 cut(s) | 1210 |
| BstKTI | GATC | 2 cut(s) | 508, 1185 |
| BstMAI | GTCTC | 2 cut(s) | 30, 338 |
| BstMBI | GATC | 2 cut(s) | 505, 1182 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 155, 495, 1058, 1079 |
| BstNI | CCWGG | 1 cut(s) | 833 |
| BstNSI | RCATGY | 5 cut(s) | 440, 694, 711, 852, 946 |
| BstSCI | CCNGG | 3 cut(s) | 652, 653, 831 |
| BstV1I | GCAGC | 2 cut(s) | 4, 833 |
| BstZ17I | GTATAC | 1 cut(s) | 948 |
| Bsu36I | CCTNAGG | 1 cut(s) | 189 |
| BsuRI | GGCC | 2 cut(s) | 561, 897 |
| BtsCI | GGATG | 2 cut(s) | 862, 1197 |
| BtsIMutI | CAGTG | 2 cut(s) | 286, 433 |
| Cac8I | GCNNGC | 5 cut(s) | 434, 610, 692, 846, 1080 |
| CaiI | CAGNNNCTG | 1 cut(s) | 326 |
| CfoI | GCGC | 1 cut(s) | 1210 |
| Cfr13I | GGNCC | 3 cut(s) | 560, 827, 969 |
| Cfr9I | CCCGGG | 1 cut(s) | 653 |
| CseI | GACGC | 1 cut(s) | 147 |
| Csp6I | GTAC | 4 cut(s) | 552, 663, 1047, 1120 |
| CviQI | GTAC | 4 cut(s) | 552, 663, 1047, 1120 |
| DdeI | CTNAG | 6 cut(s) | 99, 126, 189, 396, 669, 1093 |
| DpnI | GATC | 2 cut(s) | 507, 1184 |
| DpnII | GATC | 2 cut(s) | 505, 1182 |
| DraI | TTTAAA | 1 cut(s) | 112 |
| EaeI | YGGCCR | 1 cut(s) | 895 |
| Eam1104I | CTCTTC | 1 cut(s) | 92 |
| EarI | CTCTTC | 1 cut(s) | 92 |
| Eco24I | GRGCYC | 2 cut(s) | 448, 614 |
| Eco31I | GGTCTC | 2 cut(s) | 30, 338 |
| Eco47I | GGWCC | 2 cut(s) | 827, 969 |
| Eco57I | CTGAAG | 1 cut(s) | 303 |
| Eco81I | CCTNAGG | 1 cut(s) | 189 |
| Eco88I | CYCGRG | 1 cut(s) | 653 |
| EcoO109I | RGGNCCY | 1 cut(s) | 969 |
| EcoRII | CCWGG | 1 cut(s) | 831 |
| EcoT38I | GRGCYC | 2 cut(s) | 448, 614 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 301, 333 |
| FaqI | GGGAC | 1 cut(s) | 1186 |
| FauI | CCCGC | 1 cut(s) | 601 |
| FauNDI | CATATG | 1 cut(s) | 340 |
| FblI | GTMKAC | 1 cut(s) | 947 |
| Fnu4HI | GCNGC | 2 cut(s) | 18, 822 |
| FokI | GGATG | 2 cut(s) | 869, 1204 |
| FriOI | GRGCYC | 2 cut(s) | 448, 614 |
| Fsp4HI | GCNGC | 2 cut(s) | 18, 822 |
| FspBI | CTAG | 1 cut(s) | 1176 |
| GlaI | GCGC | 1 cut(s) | 1209 |
| GluI | GCNGC | 2 cut(s) | 18, 822 |
| GsuI | CTGGAG | 1 cut(s) | 1053 |
| HaeIII | GGCC | 2 cut(s) | 561, 897 |
| HapII | CCGG | 2 cut(s) | 654, 792 |
| HgaI | GACGC | 1 cut(s) | 147 |
| HhaI | GCGC | 1 cut(s) | 1210 |
| Hin6I | GCGC | 1 cut(s) | 1208 |
| HinP1I | GCGC | 1 cut(s) | 1208 |
| HincII | GTYRAC | 1 cut(s) | 1015 |
| HindII | GTYRAC | 1 cut(s) | 1015 |
| HindIII | AAGCTT | 1 cut(s) | 419 |
| HinfI | GANTC | 2 cut(s) | 103, 1016 |
| HpaII | CCGG | 2 cut(s) | 654, 792 |
| HphI | GGTGA | 2 cut(s) | 208, 388 |
| Hpy166II | GTNNAC | 6 cut(s) | 199, 461, 552, 713, 948, 1015 |
| Hpy188I | TCNGA | 6 cut(s) | 54, 102, 399, 478, 672, 1187 |
| Hpy188III | TCNNGA | 4 cut(s) | 191, 740, 792, 1142 |
| Hpy8I | GTNNAC | 6 cut(s) | 199, 461, 552, 713, 948, 1015 |
| HpyAV | CCTTC | 5 cut(s) | 758, 875, 1015, 1148, 1182 |
| HpyCH4III | ACNGT | 1 cut(s) | 290 |
| HpyCH4IV | ACGT | 2 cut(s) | 480, 575 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 155, 495, 1058, 1079 |
| HpyF3I | CTNAG | 6 cut(s) | 99, 126, 189, 396, 669, 1093 |
| HpySE526I | ACGT | 2 cut(s) | 480, 575 |
| HspAI | GCGC | 1 cut(s) | 1208 |
| Kpn2I | TCCGGA | 1 cut(s) | 791 |
| Kzo9I | GATC | 2 cut(s) | 505, 1182 |
| LmnI | GCTCC | 2 cut(s) | 1166, 1219 |
| Lsp1109I | GCAGC | 2 cut(s) | 4, 833 |
| LweI | GCATC | 2 cut(s) | 372, 1135 |
| MaeI | CTAG | 1 cut(s) | 1176 |
| MaeII | ACGT | 2 cut(s) | 480, 575 |
| MaeIII | GTNAC | 2 cut(s) | 275, 998 |
| MalI | GATC | 2 cut(s) | 507, 1184 |
| MboI | GATC | 2 cut(s) | 505, 1182 |
| MboII | GAAGA | 4 cut(s) | 79, 221, 314, 755 |
| MfeI | CAATTG | 2 cut(s) | 371, 903 |
| MhlI | GDGCHC | 3 cut(s) | 349, 448, 614 |
| MlyI | GAGTC | 1 cut(s) | 1010 |
| MnlI | CCTC | 9 cut(s) | 15, 162, 187, 198, 244, 254, 372, 689, 801 |
| MroI | TCCGGA | 1 cut(s) | 791 |
| MroXI | GAANNNNTTC | 1 cut(s) | 750 |
| MseI | TTAA | 4 cut(s) | 111, 225, 530, 1215 |
| MspA1I | CMGCKG | 2 cut(s) | 608, 824 |
| MspI | CCGG | 2 cut(s) | 654, 792 |
| MspR9I | CCNGG | 3 cut(s) | 654, 655, 833 |
| MunI | CAATTG | 2 cut(s) | 371, 903 |
| Mva1269I | GAATGC | 1 cut(s) | 629 |
| MvaI | CCWGG | 1 cut(s) | 833 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 155, 495, 1058, 1079 |
| NciI | CCSGG | 2 cut(s) | 654, 655 |
| NdeI | CATATG | 1 cut(s) | 340 |
| NdeII | GATC | 2 cut(s) | 505, 1182 |
| NlaIV | GGNNCC | 1 cut(s) | 829 |
| NmeAIII | GCCGAG | 1 cut(s) | 666 |
| NmuCI | GTSAC | 1 cut(s) | 998 |
| NspI | RCATGY | 5 cut(s) | 440, 694, 711, 852, 946 |
| PaeI | GCATGC | 1 cut(s) | 694 |
| PasI | CCCWGGG | 1 cut(s) | 832 |
| PciI | ACATGT | 2 cut(s) | 707, 942 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1138 |
| PctI | GAATGC | 1 cut(s) | 629 |
| PdmI | GAANNNNTTC | 1 cut(s) | 750 |
| PfeI | GAWTC | 1 cut(s) | 103 |
| PkrI | GCNGC | 2 cut(s) | 19, 823 |
| PleI | GAGTC | 1 cut(s) | 1010 |
| PpsI | GAGTC | 1 cut(s) | 1010 |
| PpuMI | RGGWCCY | 1 cut(s) | 969 |
| PscI | ACATGT | 2 cut(s) | 707, 942 |
| Psp1406I | AACGTT | 1 cut(s) | 575 |
| Psp5II | RGGWCCY | 1 cut(s) | 969 |
| Psp6I | CCWGG | 1 cut(s) | 831 |
| PspGI | CCWGG | 1 cut(s) | 831 |
| PspN4I | GGNNCC | 1 cut(s) | 829 |
| PspPI | GGNCC | 3 cut(s) | 560, 827, 969 |
| PspPPI | RGGWCCY | 1 cut(s) | 969 |
| PstNI | CAGNNNCTG | 1 cut(s) | 326 |
| PvuII | CAGCTG | 1 cut(s) | 824 |
| RsaI | GTAC | 4 cut(s) | 553, 664, 1048, 1121 |
| RsaNI | GTAC | 4 cut(s) | 552, 663, 1047, 1120 |
| SaqAI | TTAA | 4 cut(s) | 111, 225, 530, 1215 |
| SatI | GCNGC | 2 cut(s) | 18, 822 |
| Sau3AI | GATC | 2 cut(s) | 505, 1182 |
| Sau96I | GGNCC | 3 cut(s) | 560, 827, 969 |
| ScaI | AGTACT | 2 cut(s) | 664, 1121 |
| SchI | GAGTC | 1 cut(s) | 1010 |
| ScrFI | CCNGG | 3 cut(s) | 654, 655, 833 |
| SduI | GDGCHC | 3 cut(s) | 349, 448, 614 |
| SfaNI | GCATC | 2 cut(s) | 372, 1135 |
| SinI | GGWCC | 2 cut(s) | 827, 969 |
| SmaI | CCCGGG | 1 cut(s) | 655 |
| SpeI | ACTAGT | 1 cut(s) | 1175 |
| SphI | GCATGC | 1 cut(s) | 694 |
| SsiI | CCGC | 3 cut(s) | 78, 608, 1098 |
| SspMI | CTAG | 1 cut(s) | 1176 |
| StyD4I | CCNGG | 3 cut(s) | 652, 653, 831 |
| TaaI | ACNGT | 1 cut(s) | 290 |
| TaiI | ACGT | 2 cut(s) | 483, 578 |
| TaqI | TCGA | 4 cut(s) | 90, 877, 1019, 1141 |
| TatI | WGTACW | 2 cut(s) | 662, 1119 |
| TfiI | GAWTC | 1 cut(s) | 103 |
| Tru1I | TTAA | 4 cut(s) | 111, 225, 530, 1215 |
| Tru9I | TTAA | 4 cut(s) | 111, 225, 530, 1215 |
| TscAI | CASTG | 2 cut(s) | 293, 433 |
| TseFI | GTSAC | 1 cut(s) | 998 |
| TseI | GCWGC | 2 cut(s) | 17, 821 |
| Tsp45I | GTSAC | 1 cut(s) | 998 |
| TspDTI | ATGAA | 3 cut(s) | 221, 506, 622 |
| TspMI | CCCGGG | 1 cut(s) | 653 |
| TspRI | CASTG | 2 cut(s) | 293, 433 |
| VpaK11BI | GGWCC | 2 cut(s) | 827, 969 |
| XceI | RCATGY | 5 cut(s) | 440, 694, 711, 852, 946 |
| XmaI | CCCGGG | 1 cut(s) | 653 |
| XmiI | GTMKAC | 1 cut(s) | 947 |
| XmnI | GAANNNNTTC | 1 cut(s) | 750 |
| XspI | CTAG | 1 cut(s) | 1176 |
| ZrmI | AGTACT | 2 cut(s) | 664, 1121 |