Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0011433

Physical Location & Seq

Genomic Coordinates Forward (+)

7004322 .. 7009888

Gene Structure 5567 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G100600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2529 bp

ATGTCTTCTTCATCTCCAACTACCGAGCCCTCTTCTGTAACTCAACTCTTAAACCCACACTCACCACTCAACGGTCACGATTCAACCGATCAACCACAGCCACTGCCGCCGCAAGACCCAGAAAACCAACCCAAAGACGACGCCGTTCCCGGTGACAAACGCAAGCGAGAGGAAAACGACGACGACGACCCGAAACCTTCCGTCGTCCCCCCTCTATGGAAGACCAGCCTCTGCTCCTACTTCAGGCGCGAGTCCGCCTCCTGCAGCCACGGGAGCGGGTGCCGGTACGCCCACGGCGAAGCGGAGCTCCGGCCCCGACCCGACAACACATGGGACCCGACCTCCGAGCGCGCGAAGAAGCAAAAGTTGGAGGAGGAGGACGGCGACCAATGTGCGGCCCCGGATAATGTAATGATGACAGAGGCCGTTGATGATGACGACGACGACGGTGACGGGGACGTTGGCGGGTTGGATCCAGAGCTGAGCAAGTGCCTGGTTCATTTACCCAGGAATTGGAAATCGGAGAAATTGAAAGACTTTCTCAGTGAGAAGGGAGTTCAATTTAAATCGGCGAAGAAGAAGAAAGGCATGACTTTAGGTTTTGTGAGTTTTCAGAGTGTAGAGCAATTGCAAACTGCTGTGAAGGAGCTGGATGGAATATCAATTGGTAACAAAAATATAAAGGTTGCGGATGTCATTCCCAGATCATTTGAAAAGAAAACCAAATCGGCAATGGCTTTACCTCAAAACCTGCAGAAAACCACAGAGGTTGAATTGGATGGGGAGAATGTGGAAGACTCTGTGGTGGCAAATGGGGCTGAGGATGGCAATGGGACTAGTGGACGAAGTGCCCGCAAAGTAGTGACTCCCCTGGCTCATATGCCTTATGGTGATCAGTTGGAGCATAAAAAGAACTCTCTTATGCAGATTCTCAAAAGACTTACTAGAAATGCTCGCAAAGCTTGTCCTGATGGTATTCCGCTTCCAGAATGGATTCTCAAGTCTAGGGAGATAGGTGGTCTTCCATGCAGTTTAGAGGGTATACTAGCATCCCCAGTTGTAAACGGATATCGTAACAAGTGTGAATTTTCAGTTGGATATTCTCTACAGGGAAAAATAACTGTGGGGTTTATGCTCGGAAATTTTAGGGAGGGTGTTACAGCAGTTGAAGAACCTTTTGACTGCCCAAATGTTTCCAGAATTTCTTGCAAATATGCCTCTATCTTTCAGGAGTTTCTGCAACATTCAAGTTTACCAGTTTGGAACAGATTTAAGAATATTGGATTCTGGCGTCAACTGACGGTTCGAGAAGGGAGGAGACCAGGCATGGCCTCTGATGTTGAAAATTGTGAGGCCAATATTGCAGAGGTCATGCTTATTGTTCAGGTTTCCAGTACAGGATTTGATGATGCACAGATAACCAGTGATTTTGAGAGGCTAGCACAAGCTTTTTCTGCAGGAGCTACTGCCTGTTCGCCATATTTGCCTCTAACAGCTTTAGTTATTCAGGATCACCAAGGAATATCAAATGCAGCACCGGCTGATGCTCCATTGCGCTCATTATCTATTTCGAAAGGAGAAGGTAGTTCTGAAATGCAGGCCACCGACAATGTTGTAGAAGCAAAAATTCATGACTATATAAGTAATCTTCGGTTCTGCATATCACCAACAGCATTTTTCCAGGTCAATACCCTTGCTGCAGAGAAGCTATACTCGCTTGCAGGGGATTGGGCTGAGTTGGGTCCTGATACCTTGCTATTTGATGTATGCTGTGGGACTGGAACAATTGGGCTGACTTTAGCACATCATGTTGGTATGGTTATTGGCATTGAAATGAATGCTTCTGCGGTTTCAGATGCTCGTAGGAATGCTGAAATTAATGGCATAACAAACTGTAGATTTGTCAGTGCGAAGGCAGAGGATGTGATGCGGTCTTTATTGGAAGAGTACATTAATGCACCTCAGAAACAAGAAAATAACGTCATTGAAGGTATTGACGAAGTTGTTGCTACTGATGAAGAGAAACCAATCTCAACAGACAACAAACCCAACCCTGAAGTGAATTCAAGCCATGAGCTTGAAAGTGGTAAGACTGCATCTGAGGGTTTAGAAACCGACAAGCAGGAACTCAGAAGCCAACTTCAGAGTAGTTGCACTTCTGAAAATGGGAATGCTCCAGTGAAACGTTTTAGTAATGTTGTTGCTATTGTTGATCCTCCACGAAGCGGACTTCATCCCACTGTGATCAAAGCTCTTAGAACTCATCCTGGTCTACGGAAGCTTGTTTACATTTCCTGCAATCCTGAAAGCTTAGTGGCAAATGCTATCGAGCTTTGCACACCATCTCCTGAGAAAATCGAAAAGAACAAGAACAACAGAGCATGGAGAAACATGAGCAGTGCTGGTCTAGCACGGCACAGGGCCAAGTCTATGCCGGCTTCAGAGCCTTTCCGACCTGTCAAAGCAATGGCCGTTGATCTATTTCCACATACCATACACTGCGAATTGGTAATGCTCCTTGAGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 tRNA_U5-meth_tr zf-CCCH

Protein Analysis

843

Amino Acids

92.16

Weight (kDa)

5.37

Isoelectric Point (pI)

50.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011433)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28450 AT2G28450
fragaria_vesca	FvH4_3g32530 FvH4_3g32530 FvH4_3g32530 FvH4_3g32530
malus_domestica	MD03G1116700.v1.1 MD11G1134700.v1.1
prunus_persica	Prupe.6G100600_v2.0.a1
pyrus_communis	pycom11g11180
rosa_chinensis	RchiOBHm_Chr5g0059591
rosa_laevigata	RLG00000035305
rosa_multiflora	Rmu_sc0016795.1_g000001
rosa_roxburghii	Rroxscaffold_1G00021020 Rroxscaffold_1G00047200
rosa_rugosa	Rorug05G0323400
rosa_samantha	Rh5AG388100 Rh5BG400100 Rh5CG424400 Rh5DG416300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	759
AccB1I	GGYRCC	1 cut(s)	279
AccB7I	CCANNNNNTGG	1 cut(s)	513
AccBSI	CCGCTC	1 cut(s)	276
AccI	GTMKAC	2 cut(s)	1042, 2272
AccII	CGCG	3 cut(s)	249, 351, 353
AclI	AACGTT	1 cut(s)	2185
AclWI	GGATC	4 cut(s)	467, 480, 1518, 2207
AcoI	YGGCCR	1 cut(s)	2469
AcsI	RAATTY	5 cut(s)	1085, 1141, 1200, 1626, 2062
AcuI	CTGAAG	4 cut(s)	226, 2076, 2126, 2424
AcyI	GRCGYC	2 cut(s)	141, 1291
AfaI	GTAC	3 cut(s)	287, 1396, 1949
AfiI	CCNNNNNNNGG	6 cut(s)	71, 216, 243, 394, 513, 2225
AhlI	ACTAGT	1 cut(s)	836
AjnI	CCWGG	6 cut(s)	492, 506, 870, 1321, 1680, 2266
AjuI	GAANNNNNNNTTGG	4 cut(s)	350, 382, 1077, 1109
Alw21I	GWGCWC	1 cut(s)	309
Alw26I	GTCTC	1 cut(s)	1312
AlwI	GGATC	4 cut(s)	467, 480, 1518, 2207
AlwNI	CAGNNNCTG	2 cut(s)	103, 231
AoxI	GGCC	8 cut(s)	311, 396, 423, 1329, 1353, 1599, 2421, 2469
ApeKI	GCWGC	3 cut(s)	264, 1532, 1697
ApoI	RAATTY	5 cut(s)	1085, 1141, 1200, 1626, 2062
AseI	ATTAAT	2 cut(s)	1878, 1953
Asp700I	GAANNNNTTC	1 cut(s)	993
AspLEI	GCGC	4 cut(s)	249, 351, 353, 1557
AspS9I	GGNCC	5 cut(s)	312, 334, 397, 1742, 2421
AsuC2I	CCSGG	2 cut(s)	150, 401
AsuHPI	GGTGA	6 cut(s)	54, 164, 461, 902, 1505, 1656
AsuII	TTCGAA	1 cut(s)	1571
AsuNHI	GCTAGC	1 cut(s)	1438
AvaII	GGWCC	2 cut(s)	334, 1742
BaeGI	GKGCMC	1 cut(s)	853
BamHI	GGATCC	1 cut(s)	472
BanI	GGYRCC	1 cut(s)	279
BanII	GRGCYC	2 cut(s)	30, 309
BarI	GAAGNNNNNNTAC	4 cut(s)	2140, 2172, 2270, 2302
BbsI	GAAGAC	3 cut(s)	227, 801, 1013
Bbv12I	GWGCWC	1 cut(s)	309
BbvCI	CCTCAGC	1 cut(s)	819
BbvI	GCAGC	3 cut(s)	276, 1544, 1684
BccI	CCATC	5 cut(s)	647, 773, 818, 965, 2350
BceAI	ACGGC	6 cut(s)	128, 310, 397, 410, 2429, 2456
BcgI	CGANNNNNNTGC	4 cut(s)	374, 408, 1988, 2022
BciT130I	CCWGG	6 cut(s)	494, 508, 872, 1323, 1682, 2268
BclI	TGATCA	2 cut(s)	892, 2244
BcnI	CCSGG	2 cut(s)	150, 401
BcoDI	GTCTC	1 cut(s)	1312
BcuI	ACTAGT	1 cut(s)	836
BfaI	CTAG	6 cut(s)	837, 945, 1005, 1046, 1439, 2408
BfmI	CTRYAG	6 cut(s)	262, 752, 1106, 1455, 1698, 1894
BfuAI	ACCTGC	1 cut(s)	759
BisI	GCNGC	6 cut(s)	107, 110, 265, 396, 1533, 1698
BlpI	GCTNAGC	1 cut(s)	482
BlsI	GCNGC	6 cut(s)	108, 111, 266, 397, 1534, 1699
Bme1390I	CCNGG	8 cut(s)	150, 401, 494, 508, 872, 1323, 1682, 2268
Bme18I	GGWCC	2 cut(s)	334, 1742
BmgT120I	GGNCC	5 cut(s)	312, 334, 397, 1742, 2421
BmiI	GGNNCC	7 cut(s)	281, 314, 335, 336, 399, 474, 1743
BmrFI	CCNGG	8 cut(s)	150, 401, 494, 508, 872, 1323, 1682, 2268
BmrI	ACTGGG	1 cut(s)	1049
BmsI	GCATC	6 cut(s)	1058, 1399, 1534, 1846, 1917, 2105
BmtI	GCTAGC	1 cut(s)	1442
BmuI	ACTGGG	1 cut(s)	1049
BpiI	GAAGAC	3 cut(s)	227, 801, 1013
BplI	GAGNNNNNCTC	2 cut(s)	242, 274
BpmI	CTGGAG	1 cut(s)	2160
Bpu10I	CCTNAGC	1 cut(s)	819
Bpu1102I	GCTNAGC	1 cut(s)	482
Bpu14I	TTCGAA	1 cut(s)	1571
BpuEI	CTTGAG	1 cut(s)	983
BpuMI	CCSGG	2 cut(s)	150, 401
BsaHI	GRCGYC	2 cut(s)	141, 1291
BsaI	GGTCTC	1 cut(s)	1312
BsaJI	CCNNGG	6 cut(s)	268, 292, 399, 506, 870, 1516
BsaXI	ACNNNNNCTCC	4 cut(s)	326, 356, 2329, 2359
Bsc4I	CCNNNNNNNGG	6 cut(s)	71, 216, 243, 394, 513, 2225
Bse118I	RCCGGY	3 cut(s)	282, 1537, 2434
Bse1I	ACTGG	6 cut(s)	1055, 1256, 1392, 1422, 1783, 2177
Bse3DI	GCAATG	4 cut(s)	738, 835, 1550, 2472
BseBI	CCWGG	6 cut(s)	494, 508, 872, 1323, 1682, 2268
BseDI	CCNNGG	6 cut(s)	268, 292, 399, 506, 870, 1516
BseGI	GGATG	8 cut(s)	658, 697, 784, 829, 1049, 1927, 2233, 2263
BseLI	CCNNNNNNNGG	6 cut(s)	71, 216, 243, 394, 513, 2225
BseMI	GCAATG	4 cut(s)	738, 835, 1550, 2472
BseMII	CTCAG	8 cut(s)	473, 556, 810, 1725, 1976, 2091, 2143, 2340
BseNI	ACTGG	6 cut(s)	1055, 1256, 1392, 1422, 1783, 2177
BsePI	GCGCGC	1 cut(s)	349
BseRI	GAGGAG	3 cut(s)	386, 389, 1330
BseSI	GKGCMC	1 cut(s)	853
BseXI	GCAGC	3 cut(s)	276, 1544, 1684
Bsh1236I	CGCG	3 cut(s)	249, 351, 353
BshFI	GGCC	8 cut(s)	313, 398, 425, 1331, 1355, 1601, 2423, 2471
BshNI	GGYRCC	1 cut(s)	279
BsiHKAI	GWGCWC	1 cut(s)	309
BsiSI	CCGG	6 cut(s)	150, 283, 310, 401, 1538, 2435
BslFI	GGGAC	5 cut(s)	191, 347, 470, 847, 1789
BslI	CCNNNNNNNGG	6 cut(s)	71, 216, 243, 394, 513, 2225
BsmAI	GTCTC	1 cut(s)	1312
BsmFI	GGGAC	5 cut(s)	191, 347, 470, 847, 1789
BsmI	GAATGC	3 cut(s)	1843, 1873, 2176
BsnI	GGCC	8 cut(s)	313, 398, 425, 1331, 1355, 1601, 2423, 2471
Bso31I	GGTCTC	1 cut(s)	1312
Bsp119I	TTCGAA	1 cut(s)	1571
Bsp1286I	GDGCHC	3 cut(s)	30, 309, 853
Bsp143I	GATC	8 cut(s)	88, 472, 704, 892, 1510, 2212, 2244, 2476
Bsp1720I	GCTNAGC	1 cut(s)	482
BspANI	GGCC	8 cut(s)	313, 398, 425, 1331, 1355, 1601, 2423, 2471
BspCNI	CTCAG	8 cut(s)	474, 555, 811, 1726, 1975, 2092, 2142, 2341
BspFNI	CGCG	3 cut(s)	249, 351, 353
BspHI	TCATGA	1 cut(s)	1630
BspLI	GGNNCC	7 cut(s)	281, 314, 335, 336, 399, 474, 1743
BspMAI	CTGCAG	4 cut(s)	266, 756, 1459, 1702
BspMI	ACCTGC	1 cut(s)	759
BspOI	GCTAGC	1 cut(s)	1442
BspPI	GGATC	4 cut(s)	467, 480, 1518, 2207
BspT104I	TTCGAA	1 cut(s)	1571
BspT107I	GGYRCC	1 cut(s)	279
BspTNI	GGTCTC	1 cut(s)	1312
BsrBI	CCGCTC	1 cut(s)	276
BsrDI	GCAATG	4 cut(s)	738, 835, 1550, 2472
BsrFI	RCCGGY	3 cut(s)	282, 1537, 2434
BsrI	ACTGG	6 cut(s)	1055, 1256, 1392, 1422, 1783, 2177
BssAI	RCCGGY	3 cut(s)	282, 1537, 2434
BssECI	CCNNGG	6 cut(s)	268, 292, 399, 506, 870, 1516
BssHII	GCGCGC	1 cut(s)	349
BssMI	GATC	8 cut(s)	88, 472, 704, 892, 1510, 2212, 2244, 2476
BssNAI	GTATAC	1 cut(s)	1043
BssNI	GRCGYC	2 cut(s)	141, 1291
BssT1I	CCWWGG	1 cut(s)	1516
Bst1107I	GTATAC	1 cut(s)	1043
Bst2UI	CCWGG	6 cut(s)	494, 508, 872, 1323, 1682, 2268
Bst4CI	ACNGT	6 cut(s)	74, 449, 1123, 1303, 1895, 2242
Bst6I	CTCTTC	3 cut(s)	37, 1938, 2013
BstACI	GRCGYC	2 cut(s)	141, 1291
BstBI	TTCGAA	1 cut(s)	1571
BstC8I	GCNNGC	8 cut(s)	164, 351, 853, 955, 1440, 1599, 1719, 2436
BstDSI	CCRYGG	2 cut(s)	268, 292
BstENI	CCTNNNNNAGG	1 cut(s)	241
BstF5I	GGATG	8 cut(s)	658, 697, 784, 829, 1049, 1927, 2233, 2263
BstFNI	CGCG	3 cut(s)	249, 351, 353
BstHHI	GCGC	4 cut(s)	249, 351, 353, 1557
BstKTI	GATC	8 cut(s)	91, 475, 707, 895, 1513, 2215, 2247, 2479
BstMAI	GTCTC	1 cut(s)	1312
BstMBI	GATC	8 cut(s)	88, 472, 704, 892, 1510, 2212, 2244, 2476
BstNI	CCWGG	6 cut(s)	494, 508, 872, 1323, 1682, 2268
BstSCI	CCNGG	8 cut(s)	148, 399, 492, 506, 870, 1321, 1680, 2266
BstSFI	CTRYAG	6 cut(s)	262, 752, 1106, 1455, 1698, 1894
BstSLI	GKGCMC	1 cut(s)	853
BstUI	CGCG	3 cut(s)	249, 351, 353
BstV1I	GCAGC	3 cut(s)	276, 1544, 1684
BstV2I	GAAGAC	3 cut(s)	227, 801, 1013
BstX2I	RGATCY	1 cut(s)	472
BstYI	RGATCY	1 cut(s)	472
BstZ17I	GTATAC	1 cut(s)	1043
BsuRI	GGCC	8 cut(s)	313, 398, 425, 1331, 1355, 1601, 2423, 2471
BtgI	CCRYGG	2 cut(s)	268, 292
BtsCI	GGATG	8 cut(s)	658, 697, 784, 829, 1049, 1927, 2233, 2263
BtsI	GCAGTG	3 cut(s)	101, 2404, 2497
BtsIMutI	CAGTG	8 cut(s)	101, 550, 1429, 1912, 2184, 2238, 2404, 2497
BveI	ACCTGC	1 cut(s)	759
Cac8I	GCNNGC	8 cut(s)	164, 351, 853, 955, 1440, 1599, 1719, 2436
CaiI	CAGNNNCTG	2 cut(s)	103, 231
CciI	TCATGA	1 cut(s)	1630
CfoI	GCGC	4 cut(s)	249, 351, 353, 1557
Cfr10I	RCCGGY	3 cut(s)	282, 1537, 2434
Cfr13I	GGNCC	5 cut(s)	312, 334, 397, 1742, 2421
CseI	GACGC	2 cut(s)	149, 1280
Csp6I	GTAC	3 cut(s)	286, 1395, 1948
CspCI	CAANNNNNGTGG	2 cut(s)	751, 786
CviQI	GTAC	3 cut(s)	286, 1395, 1948
DpnI	GATC	8 cut(s)	90, 474, 706, 894, 1512, 2214, 2246, 2478
DpnII	GATC	8 cut(s)	88, 472, 704, 892, 1510, 2212, 2244, 2476
DraI	TTTAAA	1 cut(s)	565
EaeI	YGGCCR	1 cut(s)	2469
Eam1104I	CTCTTC	3 cut(s)	37, 1938, 2013
EarI	CTCTTC	3 cut(s)	37, 1938, 2013
EciI	GGCGGA	1 cut(s)	244
Ecl136II	GAGCTC	1 cut(s)	307
Eco130I	CCWWGG	1 cut(s)	1516
Eco24I	GRGCYC	2 cut(s)	30, 309
Eco31I	GGTCTC	1 cut(s)	1312
Eco32I	GATATC	1 cut(s)	1070
Eco47I	GGWCC	2 cut(s)	334, 1742
Eco53kI	GAGCTC	1 cut(s)	307
Eco57I	CTGAAG	4 cut(s)	226, 2076, 2126, 2424
EcoICRI	GAGCTC	1 cut(s)	307
EcoNI	CCTNNNNNAGG	1 cut(s)	241
EcoO109I	RGGNCCY	2 cut(s)	334, 1742
EcoRI	GAATTC	1 cut(s)	2062
EcoRII	CCWGG	6 cut(s)	492, 506, 870, 1321, 1680, 2266
EcoRV	GATATC	1 cut(s)	1070
EcoT14I	CCWWGG	1 cut(s)	1516
EcoT38I	GRGCYC	2 cut(s)	30, 309
ErhI	CCWWGG	1 cut(s)	1516
FaqI	GGGAC	5 cut(s)	191, 347, 470, 847, 1789
FauI	CCCGC	3 cut(s)	269, 458, 860
FauNDI	CATATG	1 cut(s)	879
FbaI	TGATCA	2 cut(s)	892, 2244
FblI	GTMKAC	2 cut(s)	1042, 2272
Fnu4HI	GCNGC	6 cut(s)	107, 110, 265, 396, 1533, 1698
FokI	GGATG	8 cut(s)	665, 704, 791, 836, 1036, 1934, 2220, 2250
FriOI	GRGCYC	2 cut(s)	30, 309
Fsp4HI	GCNGC	6 cut(s)	107, 110, 265, 396, 1533, 1698
FspBI	CTAG	6 cut(s)	837, 945, 1005, 1046, 1439, 2408
GlaI	GCGC	4 cut(s)	248, 350, 352, 1556
GluI	GCNGC	6 cut(s)	107, 110, 265, 396, 1533, 1698
GsuI	CTGGAG	1 cut(s)	2160
HaeIII	GGCC	8 cut(s)	313, 398, 425, 1331, 1355, 1601, 2423, 2471
HapII	CCGG	6 cut(s)	150, 283, 310, 401, 1538, 2435
HgaI	GACGC	2 cut(s)	149, 1280
HhaI	GCGC	4 cut(s)	249, 351, 353, 1557
Hin1I	GRCGYC	2 cut(s)	141, 1291
Hin6I	GCGC	4 cut(s)	247, 349, 351, 1555
HinP1I	GCGC	4 cut(s)	247, 349, 351, 1555
HincII	GTYRAC	1 cut(s)	1295
HindII	GTYRAC	1 cut(s)	1295
HindIII	AAGCTT	4 cut(s)	960, 1446, 2279, 2308
HinfI	GANTC	7 cut(s)	80, 251, 797, 865, 928, 994, 1284
HpaII	CCGG	6 cut(s)	150, 283, 310, 401, 1538, 2435
HphI	GGTGA	6 cut(s)	54, 164, 461, 902, 1505, 1656
Hpy166II	GTNNAC	7 cut(s)	842, 1043, 1063, 1253, 1295, 2273, 2287
Hpy8I	GTNNAC	7 cut(s)	842, 1043, 1063, 1253, 1295, 2273, 2287
Hpy99I	CGWCG	8 cut(s)	143, 182, 185, 188, 206, 443, 446, 449
HpyAV	CCTTC	7 cut(s)	207, 544, 637, 1304, 1574, 1906, 1982
HpyCH4III	ACNGT	6 cut(s)	74, 449, 1123, 1303, 1895, 2242
HpyCH4IV	ACGT	3 cut(s)	459, 1980, 2185
HpySE526I	ACGT	3 cut(s)	459, 1980, 2185
Hsp92I	GRCGYC	2 cut(s)	141, 1291
HspAI	GCGC	4 cut(s)	247, 349, 351, 1555
KflI	GGGWCCC	1 cut(s)	334
KroI	GCCGGC	1 cut(s)	2434
KroNI	GCCGGC	1 cut(s)	2436
Ksp22I	TGATCA	2 cut(s)	892, 2244
Kzo9I	GATC	8 cut(s)	88, 472, 704, 892, 1510, 2212, 2244, 2476
Lsp1109I	GCAGC	3 cut(s)	276, 1544, 1684
LweI	GCATC	6 cut(s)	1058, 1399, 1534, 1846, 1917, 2105
MaeI	CTAG	6 cut(s)	837, 945, 1005, 1046, 1439, 2408
MaeII	ACGT	3 cut(s)	459, 1980, 2185
MaeIII	GTNAC	8 cut(s)	37, 74, 152, 449, 668, 862, 1073, 1156
MalI	GATC	8 cut(s)	90, 474, 706, 894, 1512, 2214, 2246, 2478
MbiI	CCGCTC	1 cut(s)	276
MboI	GATC	8 cut(s)	88, 472, 704, 892, 1510, 2212, 2244, 2476
MfeI	CAATTG	3 cut(s)	626, 663, 1785
MflI	RGATCY	1 cut(s)	472
MhlI	GDGCHC	3 cut(s)	30, 309, 853
MlyI	GAGTC	3 cut(s)	260, 791, 859
MmeI	TCCRAC	6 cut(s)	41, 348, 450, 879, 1075, 2476
MroNI	GCCGGC	1 cut(s)	2434
MroXI	GAANNNNTTC	1 cut(s)	993
MseI	TTAA	5 cut(s)	50, 564, 1272, 1878, 1953
MslI	CAYNNNNRTG	1 cut(s)	1832
MspI	CCGG	6 cut(s)	150, 283, 310, 401, 1538, 2435
MspR9I	CCNGG	8 cut(s)	150, 401, 494, 508, 872, 1323, 1682, 2268
MunI	CAATTG	3 cut(s)	626, 663, 1785
Mva1269I	GAATGC	3 cut(s)	1843, 1873, 2176
MvaI	CCWGG	6 cut(s)	494, 508, 872, 1323, 1682, 2268
MvnI	CGCG	3 cut(s)	249, 351, 353
NaeI	GCCGGC	1 cut(s)	2436
NciI	CCSGG	2 cut(s)	150, 401
NdeI	CATATG	1 cut(s)	879
NdeII	GATC	8 cut(s)	88, 472, 704, 892, 1510, 2212, 2244, 2476
NgoMIV	GCCGGC	1 cut(s)	2434
NheI	GCTAGC	1 cut(s)	1438
NlaIV	GGNNCC	7 cut(s)	281, 314, 335, 336, 399, 474, 1743
NmuCI	GTSAC	4 cut(s)	74, 152, 449, 862
NspV	TTCGAA	1 cut(s)	1571
PagI	TCATGA	1 cut(s)	1630
PauI	GCGCGC	1 cut(s)	349
PcsI	WCGNNNNNNNCGW	3 cut(s)	84, 183, 294
PctI	GAATGC	3 cut(s)	1843, 1873, 2176
PdiI	GCCGGC	1 cut(s)	2436
PdmI	GAANNNNTTC	1 cut(s)	993
PfeI	GAWTC	4 cut(s)	80, 928, 994, 1284
PflMI	CCANNNNNTGG	1 cut(s)	513
PkrI	GCNGC	6 cut(s)	108, 111, 266, 397, 1534, 1699
PleI	GAGTC	3 cut(s)	259, 791, 859
PpsI	GAGTC	3 cut(s)	259, 791, 859
PpuMI	RGGWCCY	2 cut(s)	334, 1742
PshBI	ATTAAT	2 cut(s)	1878, 1953
Psp124BI	GAGCTC	1 cut(s)	309
Psp1406I	AACGTT	1 cut(s)	2185
Psp5II	RGGWCCY	2 cut(s)	334, 1742
Psp6I	CCWGG	6 cut(s)	492, 506, 870, 1321, 1680, 2266
PspGI	CCWGG	6 cut(s)	492, 506, 870, 1321, 1680, 2266
PspN4I	GGNNCC	7 cut(s)	281, 314, 335, 336, 399, 474, 1743
PspPI	GGNCC	5 cut(s)	312, 334, 397, 1742, 2421
PspPPI	RGGWCCY	2 cut(s)	334, 1742
PstI	CTGCAG	4 cut(s)	266, 756, 1459, 1702
PstNI	CAGNNNCTG	2 cut(s)	103, 231
PsuI	RGATCY	1 cut(s)	472
PteI	GCGCGC	1 cut(s)	349
RsaI	GTAC	3 cut(s)	287, 1396, 1949
RsaNI	GTAC	3 cut(s)	286, 1395, 1948
RseI	CAYNNNNRTG	1 cut(s)	1832
SacI	GAGCTC	1 cut(s)	309
SaqAI	TTAA	5 cut(s)	50, 564, 1272, 1878, 1953
SatI	GCNGC	6 cut(s)	107, 110, 265, 396, 1533, 1698
Sau3AI	GATC	8 cut(s)	88, 472, 704, 892, 1510, 2212, 2244, 2476
Sau96I	GGNCC	5 cut(s)	312, 334, 397, 1742, 2421
SchI	GAGTC	3 cut(s)	260, 791, 859
ScrFI	CCNGG	8 cut(s)	150, 401, 494, 508, 872, 1323, 1682, 2268
SduI	GDGCHC	3 cut(s)	30, 309, 853
SfaNI	GCATC	6 cut(s)	1058, 1399, 1534, 1846, 1917, 2105
SfcI	CTRYAG	6 cut(s)	262, 752, 1106, 1455, 1698, 1894
SfuI	TTCGAA	1 cut(s)	1571
SinI	GGWCC	2 cut(s)	334, 1742
SmiI	ATTTAAAT	1 cut(s)	565
SmiMI	CAYNNNNRTG	1 cut(s)	1832
SmlI	CTYRAG	2 cut(s)	998, 2519
SmoI	CTYRAG	2 cut(s)	998, 2519
SpeI	ACTAGT	1 cut(s)	836
SspI	AATATT	2 cut(s)	1279, 1360
SspMI	CTAG	6 cut(s)	837, 945, 1005, 1046, 1439, 2408
SstI	GAGCTC	1 cut(s)	309
StyD4I	CCNGG	8 cut(s)	148, 399, 492, 506, 870, 1321, 1680, 2266
StyI	CCWWGG	1 cut(s)	1516
SwaI	ATTTAAAT	1 cut(s)	565
TaaI	ACNGT	6 cut(s)	74, 449, 1123, 1303, 1895, 2242
TaiI	ACGT	3 cut(s)	462, 1983, 2188
TaqI	TCGA	4 cut(s)	1306, 1571, 2328, 2358
TatI	WGTACW	2 cut(s)	1394, 1947
TauI	GCSGC	3 cut(s)	109, 112, 398
TfiI	GAWTC	4 cut(s)	80, 928, 994, 1284
Tru1I	TTAA	5 cut(s)	50, 564, 1272, 1878, 1953
Tru9I	TTAA	5 cut(s)	50, 564, 1272, 1878, 1953
TscAI	CASTG	8 cut(s)	108, 550, 1429, 1912, 2184, 2245, 2404, 2504
TseFI	GTSAC	4 cut(s)	74, 152, 449, 862
TseI	GCWGC	3 cut(s)	264, 1532, 1697
Tsp45I	GTSAC	4 cut(s)	74, 152, 449, 862
TspDTI	ATGAA	5 cut(s)	488, 1619, 1850, 2031, 2222
TspGWI	ACGGA	3 cut(s)	190, 1080, 2290
TspRI	CASTG	8 cut(s)	108, 550, 1429, 1912, 2184, 2245, 2404, 2504
Van91I	CCANNNNNTGG	1 cut(s)	513
VpaK11BI	GGWCC	2 cut(s)	334, 1742
VspI	ATTAAT	2 cut(s)	1878, 1953
XagI	CCTNNNNNAGG	1 cut(s)	241
XapI	RAATTY	5 cut(s)	1085, 1141, 1200, 1626, 2062
XcmI	CCANNNNNNNNNTGG	1 cut(s)	730
XmiI	GTMKAC	2 cut(s)	1042, 2272
XmnI	GAANNNNTTC	1 cut(s)	993
XspI	CTAG	6 cut(s)	837, 945, 1005, 1046, 1439, 2408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.