Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0011433

Physical Location & Seq

Genomic Coordinates Forward (+)

9738269 .. 9743901

Gene Structure 5633 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g11180.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

ATGTCTTCAACTCCAACTCCAACTGCCGAACCGTCCGCAACTGAACTCCTAAACCCACCATCCCCACTCAACGGGCACGGTTCAACCGATCAACCCCAACCGCCACAGGACCCAGCAACCCAACCGCCCGACGACGTCGTATCCGGCGACAAACGCAAGCGAGAGGTTAACGACGACGTCCAAAACCCTTCCGCCGCGCCCCCTCTATGGAAGACCAGCCTCTGCTCCTTTTTCAGGCGCGAGGCCAAAACCTGCGGCCACGGAAGCGAGTGCCGCTACGCACACGGCGAGGCGGAGCTCCGTCCCCGACCCGACAACACGTGGGACCCGACATCCGAGCGCGCCAAGAAGCAGAAGTTGGAGGAGGAGATTGAGGGGTGCGTGGCTTTGGACAATGTGATGATGACGGAGGCCATCGATGAAGACGGAGACGGCGGCGATGCTGGGGGTTTGGATCCCGAGCTGAGCAAGTGCCTGGTGCATTTGCCGAGGAATTGGAAGTCCGAGAAACTGAAAGAATTTCTCAGTGAGAAGGGAGTCGGATTTAAGTCGGCGAAGAAGAAGAAAGGCATGGCTTTAGGTTTTGTGAGTTTTGAGAATGCAGAGCAATTACAAAATGCTGTGAAGGACCTGGAAGGAATATCGATTGGCAACAAAGTTATGAAGGTTGCGGATGTCATTCCCAGATCATTCGAAAAGAGAACGAAATCGATAATGGCACCTCAAATCCCAGGTGTTGGATTAGATGGGGAGAATGTGGAAGACTCTATGACTGCAAATGGGGCTGAGGATGGTGATGGGCTTACTGGACGAAGTGCCCGGAAAGTCGTGACTCCCCTAGCTCATATGTCTTATGATGATCAGTTGGAGCATAAAAAGAGCTCTCTTATGCAGATTCTCAAAAGACTTACGAGGAACGCTCGTAAAGCTTGTCCTGATGGTATTCCACTTCCAGAATGGATACTCAAGTCTAGGGAGATAGGTGGCCTTCCCTGCAGTTTAGAGGGTATACTAGCGTCCCCAGTTGTAAAAGGATATCGGAACAAGTGTGAATTTTCAGTTGGGTATTCTTTACAGGGAAAAATTACTGTGGGGTTTATGCTTGGAAACTTTAGGGAGGGTGTTACAGCAGTTGAAGAACCCTTTGACTGCCCAAATGTTTCCAGAATTTCTTCCCAATATGCTTCAATATTTCAGGAATTTCTGCAACATTCAAGTTTACCAATTTGGAACAGATTTAAGAATATTGGATTCTGGCGCCAATTGACGGTTCGAGAAGGGAGGAAACCAGGCATTGCTACTGATTCTGAACATTGTGAGGCCAATATTATGGAGGTCATGCTTATTGTTCAGGTTTCCAGTAGCGGATTTGATGATGCACAAATAACCAGTGAATATGAGAGGTTGGCTCAAGCTTTTGCTGCAGGAGCTGCTGCTAGCTCTCCATCTTTGCCACTAATGTTTTTAGTTATTCAGGATCACCAAGGAATATCGAATGCAGCTCCAGCTGATGCTCCACTGCGCTCATTATCTATACCTAAAGCAGAAGGTGGTTCCGAAACGCAGTCCGCTGACAATGTTGTAGAACCAAAAATTCATGACTATATAAACAATCTTAAGTTCTGTATATCACCAACAGCCTTTTTCCAGGTTAATACCCCTGCTGCAGAGAAGCTTTACTCGCTTGCGGGGGATTGGGCTCAGTTGGGTCCTGATACCTTGCTATTTGATGTATGTTGTGGGACTGGAACAATTGGGCTCACTTTAGCACACCATGTTGGTATGGTTGTTGGCATTGAAATGAATGCTTCTGCAGTTTCAGATGCTCGTAGGAATGCTGAAATTAATGACATAAAGAACTGTAGATTTGTCTGTGCGAAGGCAGAGGATGTGATGCGGTCTTTGTTGGAAGAGTACGCAATTGCACCTCAGAAACAAGACGATCATGTCACTGAAGGTAGTGACAAAGTTATAGTTACCGAGGGCGAGAAAGCAATCTCAATGGACAACAAACCCAACCCTGAGGAGAGTTCAAGCCATGAGCTTGACACTGCATCTGAGGGTTTAGAAATTGACAAGCAGGAAGTGAGAAGCCAACCTCAAAGCAGTTGCACTTCTGAAAAGGGGAAAACTCCAGTCAAATGTTTCAGTAATGTTGTTGCTATTGTTGATCCTCCACGAAACGGACTTCACCCCACTGTGATCAAAGCACTGAGGACTCATGCTGATCTACGGAAGCTTGTCTACATTTCCTGCAATCCTGAAACGTTGGTGGCAAATGCGATCGAGCTTTGCACACCTTCTCCTGAGAAAATCGACAAGAACAAGAACAACAGAGCATGGAGAAACATGGGCAGTGCTGGCCTAGCACGGCACAGAACCAAGTCTATGCCTGCTTCAGAGCCTTTCCGTCCTGTAAAAGCAATGGCTGTTGACATTTTCCCACATACCGTACACTGTGAATTAGTAATGCTCCTTGAGAGTGTCACCTATGCACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 tRNA_U5-meth_tr zf-CCCH

Protein Analysis

834

Amino Acids

90.86

Weight (kDa)

5.59

Isoelectric Point (pI)

47.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011433)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28450 AT2G28450
fragaria_vesca	FvH4_3g32530 FvH4_3g32530 FvH4_3g32530 FvH4_3g32530
malus_domestica	MD03G1116700.v1.1 MD11G1134700.v1.1
prunus_persica	Prupe.6G100600_v2.0.a1
pyrus_communis	pycom11g11180
rosa_chinensis	RchiOBHm_Chr5g0059591
rosa_laevigata	RLG00000035305
rosa_multiflora	Rmu_sc0016795.1_g000001
rosa_roxburghii	Rroxscaffold_1G00021020 Rroxscaffold_1G00047200
rosa_rugosa	Rorug05G0323400
rosa_samantha	Rh5AG388100 Rh5BG400100 Rh5CG424400 Rh5DG416300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1946
AatII	GACGTC	2 cut(s)	138, 180
Acc36I	ACCTGC	1 cut(s)	260
AccB1I	GGYRCC	2 cut(s)	718, 1257
AccB7I	CCANNNNNTGG	1 cut(s)	737
AccI	GTMKAC	2 cut(s)	1009, 2244
AccII	CGCG	3 cut(s)	197, 240, 342
AclI	AACGTT	1 cut(s)	2267
AclWI	GGATC	4 cut(s)	449, 462, 1485, 2165
AcoI	YGGCCR	1 cut(s)	256
AcsI	RAATTY	5 cut(s)	518, 1052, 1167, 1199, 1593
AcuI	CTGAAG	2 cut(s)	1974, 2382
AcvI	CACGTG	1 cut(s)	321
AcyI	GRCGYC	3 cut(s)	135, 177, 1258
AfaI	GTAC	2 cut(s)	1916, 2454
AfiI	CCNNNNNNNGG	6 cut(s)	71, 207, 234, 737, 1267, 2183
AflII	CTTAAG	1 cut(s)	1616
AflIII	ACRYGT	1 cut(s)	318
AgsI	TTSAA	7 cut(s)	9, 84, 1136, 1188, 1215, 1799, 2034
AjnI	CCWGG	5 cut(s)	474, 630, 730, 1288, 1647
AjuI	GAANNNNNNNTTGG	6 cut(s)	341, 373, 1044, 1076, 1254, 1286
Alw21I	GWGCWC	2 cut(s)	300, 884
Alw26I	GTCTC	1 cut(s)	423
AlwI	GGATC	4 cut(s)	449, 462, 1485, 2165
AlwNI	CAGNNNCTG	2 cut(s)	222, 1430
Ama87I	CYCGRG	1 cut(s)	458
AoxI	GGCC	6 cut(s)	243, 256, 411, 985, 1320, 2362
ApeKI	GCWGC	5 cut(s)	1421, 1430, 1433, 1499, 1664
ApoI	RAATTY	5 cut(s)	518, 1052, 1167, 1199, 1593
AseI	ATTAAT	1 cut(s)	1845
Asp700I	GAANNNNTTC	1 cut(s)	1171
AspLEI	GCGC	6 cut(s)	199, 240, 342, 344, 1260, 1524
AspS9I	GGNCC	4 cut(s)	109, 325, 628, 1709
AsuC2I	CCSGG	1 cut(s)	820
AsuHPI	GGTGA	5 cut(s)	806, 1472, 1623, 2183, 2479
AsuII	TTCGAA	1 cut(s)	693
AsuNHI	GCTAGC	1 cut(s)	1436
AvaI	CYCGRG	1 cut(s)	458
AvaII	GGWCC	4 cut(s)	109, 325, 628, 1709
AxyI	CCTNAGG	1 cut(s)	2022
BaeGI	GKGCMC	2 cut(s)	78, 820
BaeI	ACNNNNGTAYC	2 cut(s)	953, 986
BamHI	GGATCC	1 cut(s)	454
BanI	GGYRCC	2 cut(s)	718, 1257
BanII	GRGCYC	4 cut(s)	300, 884, 1702, 1761
BarI	GAAGNNNNNNTAC	2 cut(s)	2228, 2260
BbrPI	CACGTG	1 cut(s)	321
BbsI	GAAGAC	3 cut(s)	218, 429, 768
Bbv12I	GWGCWC	2 cut(s)	300, 884
BbvCI	CCTCAGC	1 cut(s)	786
BbvI	GCAGC	5 cut(s)	1408, 1417, 1420, 1511, 1651
BccI	CCATC	7 cut(s)	67, 422, 740, 785, 791, 932, 1453
BceAI	ACGGC	3 cut(s)	301, 448, 2387
BciT130I	CCWGG	5 cut(s)	476, 632, 732, 1290, 1649
BciVI	GTATCC	2 cut(s)	151, 954
BclI	TGATCA	2 cut(s)	859, 2202
BcnI	CCSGG	1 cut(s)	820
BcoDI	GTCTC	1 cut(s)	423
BfaI	CTAG	5 cut(s)	839, 972, 1013, 1437, 2366
BfmI	CTRYAG	5 cut(s)	994, 1422, 1665, 1812, 1861
BfoI	RGCGCY	1 cut(s)	1261
BfrI	CTTAAG	1 cut(s)	1616
BfuAI	ACCTGC	1 cut(s)	260
BfuI	GTATCC	2 cut(s)	151, 954
BisI	GCNGC	9 cut(s)	195, 256, 274, 436, 1422, 1431, 1434, 1500, 1665
BlpI	GCTNAGC	1 cut(s)	464
BlsI	GCNGC	9 cut(s)	196, 257, 275, 437, 1423, 1432, 1435, 1501, 1666
Bme1390I	CCNGG	6 cut(s)	476, 632, 732, 820, 1290, 1649
Bme18I	GGWCC	4 cut(s)	109, 325, 628, 1709
BmeT110I	CYCGRG	1 cut(s)	458
BmgT120I	GGNCC	4 cut(s)	109, 325, 628, 1709
BmiI	GGNNCC	8 cut(s)	111, 326, 327, 456, 720, 1259, 1555, 1710
BmrFI	CCNGG	6 cut(s)	476, 632, 732, 820, 1290, 1649
BmrI	ACTGGG	1 cut(s)	1016
BmsI	GCATC	6 cut(s)	430, 1366, 1501, 1813, 1884, 2063
BmtI	GCTAGC	1 cut(s)	1440
BmuI	ACTGGG	1 cut(s)	1016
BpiI	GAAGAC	3 cut(s)	218, 429, 768
BplI	GAGNNNNNCTC	4 cut(s)	904, 936, 1393, 1425
BpmI	CTGGAG	2 cut(s)	1488, 2118
Bpu10I	CCTNAGC	1 cut(s)	786
Bpu1102I	GCTNAGC	1 cut(s)	464
Bpu14I	TTCGAA	1 cut(s)	693
BpuEI	CTTGAG	3 cut(s)	950, 1395, 2498
BpuMI	CCSGG	1 cut(s)	820
Bsa29I	ATCGAT	3 cut(s)	417, 644, 710
BsaAI	YACGTR	1 cut(s)	321
BsaHI	GRCGYC	3 cut(s)	135, 177, 1258
BsaJI	CCNNGG	5 cut(s)	259, 488, 730, 1483, 1980
BsaXI	ACNNNNNCTCC	3 cut(s)	31, 2287, 2317
Bsc4I	CCNNNNNNNGG	6 cut(s)	71, 207, 234, 737, 1267, 2183
Bse1I	ACTGG	6 cut(s)	811, 1022, 1359, 1389, 1750, 2135
Bse21I	CCTNAGG	1 cut(s)	2022
Bse3DI	GCAATG	2 cut(s)	1293, 2430
BseBI	CCWGG	5 cut(s)	476, 632, 732, 1290, 1649
BseCI	ATCGAT	3 cut(s)	417, 644, 710
BseDI	CCNNGG	5 cut(s)	259, 488, 730, 1483, 1980
BseGI	GGATG	5 cut(s)	59, 332, 679, 796, 1894
BseLI	CCNNNNNNNGG	6 cut(s)	71, 207, 234, 737, 1267, 2183
BseMI	GCAATG	2 cut(s)	1293, 2430
BseMII	CTCAG	9 cut(s)	455, 538, 777, 1715, 1943, 2013, 2049, 2204, 2298
BseNI	ACTGG	6 cut(s)	811, 1022, 1359, 1389, 1750, 2135
BsePI	GCGCGC	1 cut(s)	340
BseRI	GAGGAG	3 cut(s)	377, 380, 2039
BseSI	GKGCMC	2 cut(s)	78, 820
BseXI	GCAGC	5 cut(s)	1408, 1417, 1420, 1511, 1651
BseYI	CCCAGC	2 cut(s)	112, 443
Bsh1236I	CGCG	3 cut(s)	197, 240, 342
Bsh1285I	CGRYCG	1 cut(s)	2286
BshFI	GGCC	6 cut(s)	245, 258, 413, 987, 1322, 2364
BshNI	GGYRCC	2 cut(s)	718, 1257
BshVI	ATCGAT	3 cut(s)	417, 644, 710
BsiEI	CGRYCG	1 cut(s)	2286
BsiHKAI	GWGCWC	2 cut(s)	300, 884
BsiHKCI	CYCGRG	1 cut(s)	458
BsiSI	CCGG	2 cut(s)	144, 820
BslFI	GGGAC	4 cut(s)	288, 338, 1003, 1756
BslI	CCNNNNNNNGG	6 cut(s)	71, 207, 234, 737, 1267, 2183
BsmAI	GTCTC	1 cut(s)	423
BsmBI	CGTCTC	1 cut(s)	423
BsmFI	GGGAC	4 cut(s)	288, 338, 1003, 1756
BsmI	GAATGC	4 cut(s)	604, 1501, 1810, 1840
BsnI	GGCC	6 cut(s)	245, 258, 413, 987, 1322, 2364
BsoBI	CYCGRG	1 cut(s)	458
Bsp119I	TTCGAA	1 cut(s)	693
Bsp1286I	GDGCHC	6 cut(s)	78, 300, 820, 884, 1702, 1761
Bsp1720I	GCTNAGC	1 cut(s)	464
BspANI	GGCC	6 cut(s)	245, 258, 413, 987, 1322, 2364
BspCNI	CTCAG	9 cut(s)	456, 537, 778, 1714, 1942, 2014, 2050, 2205, 2299
BspDI	ATCGAT	3 cut(s)	417, 644, 710
BspFNI	CGCG	3 cut(s)	197, 240, 342
BspHI	TCATGA	1 cut(s)	1597
BspLI	GGNNCC	8 cut(s)	111, 326, 327, 456, 720, 1259, 1555, 1710
BspMAI	CTGCAG	4 cut(s)	998, 1426, 1669, 1816
BspMI	ACCTGC	1 cut(s)	260
BspOI	GCTAGC	1 cut(s)	1440
BspPI	GGATC	4 cut(s)	449, 462, 1485, 2165
BspT104I	TTCGAA	1 cut(s)	693
BspT107I	GGYRCC	2 cut(s)	718, 1257
BspTI	CTTAAG	1 cut(s)	1616
BsrDI	GCAATG	2 cut(s)	1293, 2430
BsrI	ACTGG	6 cut(s)	811, 1022, 1359, 1389, 1750, 2135
BssECI	CCNNGG	5 cut(s)	259, 488, 730, 1483, 1980
BssHII	GCGCGC	1 cut(s)	340
BssNAI	GTATAC	1 cut(s)	1010
BssNI	GRCGYC	3 cut(s)	135, 177, 1258
BssT1I	CCWWGG	1 cut(s)	1483
Bst1107I	GTATAC	1 cut(s)	1010
Bst2UI	CCWGG	5 cut(s)	476, 632, 732, 1290, 1649
Bst4CI	ACNGT	8 cut(s)	33, 80, 1090, 1270, 1862, 2200, 2452, 2459
Bst6I	CTCTTC	1 cut(s)	1905
BstACI	GRCGYC	3 cut(s)	135, 177, 1258
BstAFI	CTTAAG	1 cut(s)	1616
BstAPI	GCANNNNNTGC	1 cut(s)	1430
BstBAI	YACGTR	1 cut(s)	321
BstBI	TTCGAA	1 cut(s)	693
BstC8I	GCNNGC	6 cut(s)	158, 342, 1438, 1686, 2362, 2394
BstDEI	CTNAG	9 cut(s)	464, 524, 786, 1701, 1929, 2022, 2058, 2213, 2307
BstDSI	CCRYGG	1 cut(s)	259
BstENI	CCTNNNNNAGG	1 cut(s)	232
BstF5I	GGATG	5 cut(s)	59, 332, 679, 796, 1894
BstFNI	CGCG	3 cut(s)	197, 240, 342
BstH2I	RGCGCY	1 cut(s)	1261
BstHHI	GCGC	6 cut(s)	199, 240, 342, 344, 1260, 1524
BstMAI	GTCTC	1 cut(s)	423
BstMCI	CGRYCG	1 cut(s)	2286
BstNI	CCWGG	5 cut(s)	476, 632, 732, 1290, 1649
BstSCI	CCNGG	6 cut(s)	474, 630, 730, 818, 1288, 1647
BstSFI	CTRYAG	5 cut(s)	994, 1422, 1665, 1812, 1861
BstSLI	GKGCMC	2 cut(s)	78, 820
BstUI	CGCG	3 cut(s)	197, 240, 342
BstV1I	GCAGC	5 cut(s)	1408, 1417, 1420, 1511, 1651
BstV2I	GAAGAC	3 cut(s)	218, 429, 768
BstX2I	RGATCY	1 cut(s)	454
BstXI	CCANNNNNNTGG	1 cut(s)	1330
BstYI	RGATCY	1 cut(s)	454
BstZ17I	GTATAC	1 cut(s)	1010
Bsu15I	ATCGAT	3 cut(s)	417, 644, 710
Bsu36I	CCTNAGG	1 cut(s)	2022
BsuI	GTATCC	2 cut(s)	151, 954
BsuRI	GGCC	6 cut(s)	245, 258, 413, 987, 1322, 2364
BsuTUI	ATCGAT	3 cut(s)	417, 644, 710
BtgI	CCRYGG	1 cut(s)	259
BtgZI	GCGATG	1 cut(s)	453
BtsCI	GGATG	5 cut(s)	59, 332, 679, 796, 1894
BtsI	GCAGTG	3 cut(s)	1517, 2049, 2362
BtsIMutI	CAGTG	9 cut(s)	532, 1396, 1517, 1950, 2049, 2196, 2210, 2362, 2455
BveI	ACCTGC	1 cut(s)	260
Cac8I	GCNNGC	6 cut(s)	158, 342, 1438, 1686, 2362, 2394
CaiI	CAGNNNCTG	2 cut(s)	222, 1430
CciI	TCATGA	1 cut(s)	1597
CfoI	GCGC	6 cut(s)	199, 240, 342, 344, 1260, 1524
Cfr13I	GGNCC	4 cut(s)	109, 325, 628, 1709
ClaI	ATCGAT	3 cut(s)	417, 644, 710
CseI	GACGC	1 cut(s)	1005
Csp6I	GTAC	2 cut(s)	1915, 2453
CviAII	CATG	9 cut(s)	571, 1339, 1598, 1775, 1946, 2039, 2222, 2340, 2350
CviQI	GTAC	2 cut(s)	1915, 2453
DdeI	CTNAG	9 cut(s)	464, 524, 786, 1701, 1929, 2022, 2058, 2213, 2307
DinI	GGCGCC	1 cut(s)	1259
DrdI	GACNNNNNNGTC	1 cut(s)	1946
DseDI	GACNNNNNNGTC	1 cut(s)	1946
EaeI	YGGCCR	1 cut(s)	256
Eam1104I	CTCTTC	1 cut(s)	1905
EarI	CTCTTC	1 cut(s)	1905
EciI	GGCGGA	2 cut(s)	181, 308
Ecl136II	GAGCTC	2 cut(s)	298, 882
Eco130I	CCWWGG	1 cut(s)	1483
Eco24I	GRGCYC	4 cut(s)	300, 884, 1702, 1761
Eco32I	GATATC	1 cut(s)	1037
Eco47I	GGWCC	4 cut(s)	109, 325, 628, 1709
Eco53kI	GAGCTC	2 cut(s)	298, 882
Eco57I	CTGAAG	2 cut(s)	1974, 2382
Eco72I	CACGTG	1 cut(s)	321
Eco81I	CCTNAGG	1 cut(s)	2022
Eco88I	CYCGRG	1 cut(s)	458
EcoICRI	GAGCTC	2 cut(s)	298, 882
EcoNI	CCTNNNNNAGG	1 cut(s)	232
EcoO109I	RGGNCCY	4 cut(s)	109, 325, 628, 1709
EcoRII	CCWGG	5 cut(s)	474, 630, 730, 1288, 1647
EcoRV	GATATC	1 cut(s)	1037
EcoT14I	CCWWGG	1 cut(s)	1483
EcoT38I	GRGCYC	4 cut(s)	300, 884, 1702, 1761
EgeI	GGCGCC	1 cut(s)	1259
EheI	GGCGCC	1 cut(s)	1259
ErhI	CCWWGG	1 cut(s)	1483
Esp3I	CGTCTC	1 cut(s)	423
FaeI	CATG	9 cut(s)	574, 1342, 1601, 1778, 1949, 2042, 2225, 2343, 2353
FaqI	GGGAC	4 cut(s)	288, 338, 1003, 1756
FatI	CATG	9 cut(s)	570, 1338, 1597, 1774, 1945, 2038, 2221, 2339, 2349
FauI	CCCGC	1 cut(s)	1681
FauNDI	CATATG	1 cut(s)	846
FbaI	TGATCA	2 cut(s)	859, 2202
FblI	GTMKAC	2 cut(s)	1009, 2244
Fnu4HI	GCNGC	9 cut(s)	195, 256, 274, 436, 1422, 1431, 1434, 1500, 1665
FokI	GGATG	5 cut(s)	46, 319, 686, 803, 1901
FriOI	GRGCYC	4 cut(s)	300, 884, 1702, 1761
Fsp4HI	GCNGC	9 cut(s)	195, 256, 274, 436, 1422, 1431, 1434, 1500, 1665
FspBI	CTAG	5 cut(s)	839, 972, 1013, 1437, 2366
GlaI	GCGC	6 cut(s)	198, 239, 341, 343, 1259, 1523
GluI	GCNGC	9 cut(s)	195, 256, 274, 436, 1422, 1431, 1434, 1500, 1665
GsaI	CCCAGC	2 cut(s)	116, 447
GsuI	CTGGAG	2 cut(s)	1488, 2118
HaeII	RGCGCY	1 cut(s)	1261
HaeIII	GGCC	6 cut(s)	245, 258, 413, 987, 1322, 2364
HapII	CCGG	2 cut(s)	144, 820
HgaI	GACGC	1 cut(s)	1005
HhaI	GCGC	6 cut(s)	199, 240, 342, 344, 1260, 1524
Hin1I	GRCGYC	3 cut(s)	135, 177, 1258
Hin1II	CATG	9 cut(s)	574, 1342, 1601, 1778, 1949, 2042, 2225, 2343, 2353
Hin6I	GCGC	6 cut(s)	197, 238, 340, 342, 1258, 1522
HinP1I	GCGC	6 cut(s)	197, 238, 340, 342, 1258, 1522
HincII	GTYRAC	2 cut(s)	169, 2434
HindII	GTYRAC	2 cut(s)	169, 2434
HindIII	AAGCTT	4 cut(s)	927, 1413, 1673, 2237
HinfI	GANTC	7 cut(s)	537, 764, 832, 895, 1251, 1304, 2218
HpaI	GTTAAC	1 cut(s)	169
HpaII	CCGG	2 cut(s)	144, 820
HphI	GGTGA	5 cut(s)	806, 1472, 1623, 2183, 2479
Hpy166II	GTNNAC	6 cut(s)	169, 1010, 1220, 2245, 2434, 2455
Hpy8I	GTNNAC	6 cut(s)	169, 1010, 1220, 2245, 2434, 2455
Hpy99I	CGWCG	5 cut(s)	134, 137, 140, 176, 179
HpyCH4III	ACNGT	8 cut(s)	33, 80, 1090, 1270, 1862, 2200, 2452, 2459
HpyCH4IV	ACGT	4 cut(s)	135, 177, 320, 2267
HpyF3I	CTNAG	9 cut(s)	464, 524, 786, 1701, 1929, 2022, 2058, 2213, 2307
HpySE526I	ACGT	4 cut(s)	135, 177, 320, 2267
Hsp92I	GRCGYC	3 cut(s)	135, 177, 1258
Hsp92II	CATG	9 cut(s)	574, 1342, 1601, 1778, 1949, 2042, 2225, 2343, 2353
HspAI	GCGC	6 cut(s)	197, 238, 340, 342, 1258, 1522
KasI	GGCGCC	1 cut(s)	1257
KflI	GGGWCCC	1 cut(s)	325
Ksp22I	TGATCA	2 cut(s)	859, 2202
KspAI	GTTAAC	1 cut(s)	169
LmnI	GCTCC	8 cut(s)	230, 295, 303, 868, 1427, 1507, 1519, 2478
Lsp1109I	GCAGC	5 cut(s)	1408, 1417, 1420, 1511, 1651
LweI	GCATC	6 cut(s)	430, 1366, 1501, 1813, 1884, 2063
MaeI	CTAG	5 cut(s)	839, 972, 1013, 1437, 2366
MaeII	ACGT	4 cut(s)	135, 177, 320, 2267
MaeIII	GTNAC	6 cut(s)	829, 1123, 1948, 1961, 1975, 2485
MboII	GAAGA	9 cut(s)	223, 434, 568, 571, 574, 773, 1148, 1164, 1922
MfeI	CAATTG	3 cut(s)	1262, 1752, 1920
MflI	RGATCY	1 cut(s)	454
MhlI	GDGCHC	6 cut(s)	78, 300, 820, 884, 1702, 1761
Mly113I	GGCGCC	1 cut(s)	1258
MlyI	GAGTC	4 cut(s)	546, 758, 826, 2212
MmeI	TCCRAC	7 cut(s)	38, 44, 339, 520, 718, 846, 1887
MroXI	GAANNNNTTC	1 cut(s)	1171
MseI	TTAA	6 cut(s)	168, 546, 1239, 1617, 1653, 1845
MslI	CAYNNNNRTG	1 cut(s)	1799
MspA1I	CMGCKG	2 cut(s)	1508, 1571
MspCI	CTTAAG	1 cut(s)	1616
MspI	CCGG	2 cut(s)	144, 820
MspR9I	CCNGG	6 cut(s)	476, 632, 732, 820, 1290, 1649
MunI	CAATTG	3 cut(s)	1262, 1752, 1920
Mva1269I	GAATGC	4 cut(s)	604, 1501, 1810, 1840
MvaI	CCWGG	5 cut(s)	476, 632, 732, 1290, 1649
MvnI	CGCG	3 cut(s)	197, 240, 342
NarI	GGCGCC	1 cut(s)	1258
NciI	CCSGG	1 cut(s)	820
NdeI	CATATG	1 cut(s)	846
NheI	GCTAGC	1 cut(s)	1436
NlaIII	CATG	9 cut(s)	574, 1342, 1601, 1778, 1949, 2042, 2225, 2343, 2353
NlaIV	GGNNCC	8 cut(s)	111, 326, 327, 456, 720, 1259, 1555, 1710
NmeAIII	GCCGAG	1 cut(s)	513
NmuCI	GTSAC	4 cut(s)	829, 1948, 1961, 2485
NspV	TTCGAA	1 cut(s)	693
PagI	TCATGA	1 cut(s)	1597
PauI	GCGCGC	1 cut(s)	340
PcsI	WCGNNNNNNNCGW	4 cut(s)	84, 144, 285, 326
PctI	GAATGC	4 cut(s)	604, 1501, 1810, 1840
PdmI	GAANNNNTTC	1 cut(s)	1171
PfeI	GAWTC	3 cut(s)	895, 1251, 1304
PflFI	GACNNNGTC	2 cut(s)	134, 176
PflMI	CCANNNNNTGG	1 cut(s)	737
PkrI	GCNGC	9 cut(s)	196, 257, 275, 437, 1423, 1432, 1435, 1501, 1666
Ple19I	CGATCG	1 cut(s)	2286
PleI	GAGTC	4 cut(s)	545, 758, 826, 2212
PluTI	GGCGCC	1 cut(s)	1261
PmaCI	CACGTG	1 cut(s)	321
PmlI	CACGTG	1 cut(s)	321
PpsI	GAGTC	4 cut(s)	545, 758, 826, 2212
Ppu21I	YACGTR	1 cut(s)	321
PpuMI	RGGWCCY	4 cut(s)	109, 325, 628, 1709
PshBI	ATTAAT	1 cut(s)	1845
Psp124BI	GAGCTC	2 cut(s)	300, 884
Psp1406I	AACGTT	1 cut(s)	2267
Psp5II	RGGWCCY	4 cut(s)	109, 325, 628, 1709
Psp6I	CCWGG	5 cut(s)	474, 630, 730, 1288, 1647
PspCI	CACGTG	1 cut(s)	321
PspFI	CCCAGC	2 cut(s)	112, 443
PspGI	CCWGG	5 cut(s)	474, 630, 730, 1288, 1647
PspN4I	GGNNCC	8 cut(s)	111, 326, 327, 456, 720, 1259, 1555, 1710
PspPI	GGNCC	4 cut(s)	109, 325, 628, 1709
PspPPI	RGGWCCY	4 cut(s)	109, 325, 628, 1709
PstI	CTGCAG	4 cut(s)	998, 1426, 1669, 1816
PstNI	CAGNNNCTG	2 cut(s)	222, 1430
PsuI	RGATCY	1 cut(s)	454
PsyI	GACNNNGTC	2 cut(s)	134, 176
PteI	GCGCGC	1 cut(s)	340
PvuI	CGATCG	1 cut(s)	2286
PvuII	CAGCTG	1 cut(s)	1508
RsaI	GTAC	2 cut(s)	1916, 2454
RsaNI	GTAC	2 cut(s)	1915, 2453
RseI	CAYNNNNRTG	1 cut(s)	1799
SacI	GAGCTC	2 cut(s)	300, 884
SaqAI	TTAA	6 cut(s)	168, 546, 1239, 1617, 1653, 1845
SatI	GCNGC	9 cut(s)	195, 256, 274, 436, 1422, 1431, 1434, 1500, 1665
Sau96I	GGNCC	4 cut(s)	109, 325, 628, 1709
SchI	GAGTC	4 cut(s)	546, 758, 826, 2212
ScrFI	CCNGG	6 cut(s)	476, 632, 732, 820, 1290, 1649
SduI	GDGCHC	6 cut(s)	78, 300, 820, 884, 1702, 1761
SfaNI	GCATC	6 cut(s)	430, 1366, 1501, 1813, 1884, 2063
SfcI	CTRYAG	5 cut(s)	994, 1422, 1665, 1812, 1861
SfoI	GGCGCC	1 cut(s)	1259
SfuI	TTCGAA	1 cut(s)	693
SinI	GGWCC	4 cut(s)	109, 325, 628, 1709
SmiMI	CAYNNNNRTG	1 cut(s)	1799
SmlI	CTYRAG	4 cut(s)	965, 1410, 1616, 2477
SmoI	CTYRAG	4 cut(s)	965, 1410, 1616, 2477
SspDI	GGCGCC	1 cut(s)	1257
SspI	AATATT	3 cut(s)	1191, 1246, 1327
SspMI	CTAG	5 cut(s)	839, 972, 1013, 1437, 2366
SstI	GAGCTC	2 cut(s)	300, 884
StyD4I	CCNGG	6 cut(s)	474, 630, 730, 818, 1288, 1647
StyI	CCWWGG	1 cut(s)	1483
TaaI	ACNGT	8 cut(s)	33, 80, 1090, 1270, 1862, 2200, 2452, 2459
TaiI	ACGT	4 cut(s)	138, 180, 323, 2270
TaqI	TCGA	8 cut(s)	417, 644, 693, 710, 1273, 1493, 2286, 2316
TauI	GCSGC	4 cut(s)	197, 258, 276, 438
TfiI	GAWTC	3 cut(s)	895, 1251, 1304
Tru1I	TTAA	6 cut(s)	168, 546, 1239, 1617, 1653, 1845
Tru9I	TTAA	6 cut(s)	168, 546, 1239, 1617, 1653, 1845
TscAI	CASTG	9 cut(s)	532, 1396, 1524, 1957, 2056, 2203, 2217, 2362, 2462
TseFI	GTSAC	4 cut(s)	829, 1948, 1961, 2485
TseI	GCWGC	5 cut(s)	1421, 1430, 1433, 1499, 1664
Tsp45I	GTSAC	4 cut(s)	829, 1948, 1961, 2485
TspDTI	ATGAA	4 cut(s)	435, 677, 1586, 1817
TspGWI	ACGGA	7 cut(s)	276, 290, 422, 441, 2199, 2248, 2399
TspRI	CASTG	9 cut(s)	532, 1396, 1524, 1957, 2056, 2203, 2217, 2362, 2462
Tth111I	GACNNNGTC	2 cut(s)	134, 176
Van91I	CCANNNNNTGG	1 cut(s)	737
Vha464I	CTTAAG	1 cut(s)	1616
VpaK11BI	GGWCC	4 cut(s)	109, 325, 628, 1709
VspI	ATTAAT	1 cut(s)	1845
XagI	CCTNNNNNAGG	1 cut(s)	232
XapI	RAATTY	5 cut(s)	518, 1052, 1167, 1199, 1593
XcmI	CCANNNNNNNNNTGG	1 cut(s)	954
XmiI	GTMKAC	2 cut(s)	1009, 2244
XmnI	GAANNNNTTC	1 cut(s)	1171
XspI	CTAG	5 cut(s)	839, 972, 1013, 1437, 2366
ZraI	GACGTC	2 cut(s)	136, 178

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.