Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0016795.1

Orthogroup ID

OG0011433

Physical Location & Seq

Genomic Coordinates Reverse (-)

503 .. 5686

Gene Structure 5184 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0016795.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

atggcttcaactgaccacccctctgtaactgaaatccaaaaccctcaatctccaatcaacggtcacgattcccccgatcaaccgcaacccccgcaggacccggaaacccagccgccgcaagacgacgccgtttcgggagacaagcggaagcgggacgaggaaggcggcgataagaagccggacgccgccgggcaacaccctctgtggaagaccagcctctgctccttcttccgccgccaggacgcgtcctgtagccacggcagcgggtgccgctttgcccacagcgaagcggagctccggccccggcccgataacacttgggacccgacctcggagcgggtcaagaaggcggcgaagaagtcgggggaggaggaggaatgcgcgggcattgatgaggtcatgatgacggaggcgttggattatgatgaggacggtgagggagaaggcggggatgggctcgggtcggatcttgctctgagtaaatgcctggtccatttgcccaggaactggaagtccgataaattgaaggacttccttagtgaccagggtattcaatataaatcggcgaagaagaagaaaggcatggcactgggttttatgagttttgaaagtgcagaacaactagaaacggcggtcaaggcattggatggaatatcaattggaaacaacaatataaaggtagcagatgttcttccccgatcatttgaaaagaaaactaaatcagcattgggtttaccattgattggggagaatgcagaagactctttggtggcaaatggggttgaggatggtgatgcgacgaagggacgaagtgcccgtgctgtagtgactccccttgctcatttgccttatactgatcagttggagcaaaaaaagagctctgttatgcagattctcaaaaaactcaccaaaagtgctcgcaaagcttgtcctaatggtgttccacttccagaatggattttaaagtctagggaaataggtggtcttccctgcattttagagggtatactagcatccccagttgtacatggatatcgtaacaagtgcgagttttcggttgggcattctctacagggcaaagtaactgtggggtttacgcttggaaactttagggagggtgttacagcaattgaagaacctttagactgcccaaatgtatctccaatttcttgcaaatatgcttctatctttcaggaatttttgcaacaatcaagtttaccagtttggagcagatttaagaatactggattctggcgtcaattgacggttcgagaagggagatcaggcatggtctctgatgctgaaaattgtgagccaaacatttcagaggtcatgcttatggttcaggtttcaactgcgggatttgatgattcacttataaccactgagtttgagaggctagcacaagctttttctgcaggtgccactgcaaattctccatctttacctctaacagttttagtaattcaggatcaccaaggaatatcaaatgtagcaccagctgatgctccattacgctcattatgtatttctaaagccgagaatggttctgaaatccaggccaccaacaatgtggcggaaccaaaaatccatgactatataaacaatcttcgcttctgtatatcaccgacagcatttttccaggttaataccctcgctgctgagaaattatactcgctcgcaggggattgggctcagttgggtcctgaaaccttgctatttgacgtatgttgtgggactggaacaattgggctgactttagcacaccgtgttggtatggttgttggcattgaaatgaatgcttctgcagttttagatgctcagaggaatgctgaaattaatggcataaagaactgtagatttgtgtgttcaaaggcagagaatgtgatgcggtctttattggaagagtaccttactgcacctgagaaacaagacaatgatgccattcaaggtagtgacaaagcaatagttactgatgacgagaaaatagttgccactgatgaagaaaaagcagtagtaaaggatgaaaaactcaaccctgaagagagtttaagccatgaggctgaaaatggtaaaagtgcatgtgaaggtttagataatagcaagcaggaccttcagaaaagttgcacttctcaaaataggaaaagtccagttcagtgtttcaagaatgtggtagctattgttgatcctccacgcaatggacttcatcccacagtgatcaaagctctgagaactcatcctggactacggaggcttgtctacatctcctgcaatcctgaaagcctagtggcaaatgctatcgagctttgcacaccttcccctgataaaattgaaaagaacaagaacaaccgagcatggagaaacatgagcagtgccggtctggcacggcaaagggcaaagtctatgcccgcttcagagccttttcaacctgtaaaagcaatggcggtcgacatttttccacatactgtacactgcgaattggtaatgctgcttgagaggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 tRNA_U5-meth_tr zf-CCCH

Protein Analysis

833

Amino Acids

90.74

Weight (kDa)

5.49

Isoelectric Point (pI)

47.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011433)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28450 AT2G28450
fragaria_vesca	FvH4_3g32530 FvH4_3g32530 FvH4_3g32530 FvH4_3g32530
malus_domestica	MD03G1116700.v1.1 MD11G1134700.v1.1
prunus_persica	Prupe.6G100600_v2.0.a1
pyrus_communis	pycom11g11180
rosa_chinensis	RchiOBHm_Chr5g0059591
rosa_laevigata	RLG00000035305
rosa_multiflora	Rmu_sc0016795.1_g000001
rosa_roxburghii	Rroxscaffold_1G00021020 Rroxscaffold_1G00047200
rosa_rugosa	Rorug05G0323400
rosa_samantha	Rh5AG388100 Rh5BG400100 Rh5CG424400 Rh5DG416300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1379
AarI	CACCTGC	1 cut(s)	1409
Acc36I	ACCTGC	1 cut(s)	1409
AccB1I	GGYRCC	2 cut(s)	267, 1421
AccB7I	CCANNNNNTGG	3 cut(s)	507, 743, 2198
AccBSI	CCGCTC	1 cut(s)	337
AccI	GTMKAC	3 cut(s)	1006, 2259, 2448
AccII	CGCG	2 cut(s)	245, 383
AclWI	GGATC	3 cut(s)	474, 1479, 2180
AcsI	RAATTY	2 cut(s)	1196, 1432
AcuI	CTGAAG	3 cut(s)	2061, 2099, 2397
AcyI	GRCGYC	3 cut(s)	126, 183, 1255
AdeI	CACNNNGTG	1 cut(s)	1769
AfaI	GTAC	3 cut(s)	1026, 1910, 2469
AfiI	CCNNNNNNNGG	7 cut(s)	59, 238, 331, 336, 507, 743, 2198
AflIII	ACRYGT	1 cut(s)	243
AjnI	CCWGG	7 cut(s)	237, 486, 500, 543, 1557, 1641, 2239
AloI	GAACNNNNNNTCC	4 cut(s)	497, 529, 1572, 1604
AluBI	AGCT	8 cut(s)	295, 879, 926, 1409, 1502, 2177, 2225, 2305
AluI	AGCT	8 cut(s)	295, 879, 926, 1409, 1502, 2177, 2225, 2305
Alw21I	GWGCWC	3 cut(s)	297, 881, 919
Alw26I	GTCTC	2 cut(s)	132, 1297
AlwI	GGATC	3 cut(s)	474, 1479, 2180
AlwNI	CAGNNNCTG	2 cut(s)	219, 507
Ama87I	CYCGRG	1 cut(s)	458
AoxI	GGCC	3 cut(s)	299, 305, 1560
ApeKI	GCWGC	3 cut(s)	261, 1658, 2488
ApoI	RAATTY	2 cut(s)	1196, 1432
AseI	ATTAAT	1 cut(s)	1839
Asp700I	GAANNNNTTC	1 cut(s)	530
AspLEI	GCGC	1 cut(s)	383
AspS9I	GGNCC	7 cut(s)	97, 300, 306, 322, 490, 1703, 2110
AsuC2I	CCSGG	3 cut(s)	101, 190, 304
AsuHPI	GGTGA	5 cut(s)	446, 803, 898, 1466, 1617
AsuNHI	GCTAGC	1 cut(s)	1399
AvaI	CYCGRG	1 cut(s)	458
AvaII	GGWCC	5 cut(s)	97, 322, 490, 1703, 2110
BaeGI	GKGCMC	1 cut(s)	817
BanI	GGYRCC	2 cut(s)	267, 1421
BanII	GRGCYC	4 cut(s)	297, 459, 881, 1696
BbsI	GAAGAC	3 cut(s)	215, 765, 977
Bbv12I	GWGCWC	3 cut(s)	297, 881, 919
BbvI	GCAGC	3 cut(s)	273, 1645, 2475
BccI	CCATC	4 cut(s)	446, 641, 782, 1447
BceAI	ACGGC	4 cut(s)	113, 274, 645, 2402
BciT130I	CCWGG	7 cut(s)	239, 488, 502, 545, 1559, 1643, 2241
BclI	TGATCA	2 cut(s)	856, 2217
BcnI	CCSGG	3 cut(s)	101, 190, 304
BcoDI	GTCTC	2 cut(s)	132, 1297
BfaI	CTAG	5 cut(s)	623, 969, 1010, 1400, 2285
BfmI	CTRYAG	6 cut(s)	250, 822, 1070, 1416, 1806, 1855
BfuAI	ACCTGC	1 cut(s)	1409
BglI	GCCNNNNNGGC	1 cut(s)	2381
Bme18I	GGWCC	5 cut(s)	97, 322, 490, 1703, 2110
BmeT110I	CYCGRG	1 cut(s)	458
BmgT120I	GGNCC	7 cut(s)	97, 300, 306, 322, 490, 1703, 2110
BmiI	GGNNCC	8 cut(s)	99, 269, 302, 323, 324, 1423, 1581, 1704
BmrI	ACTGGG	2 cut(s)	599, 1013
BmsI	GCATC	7 cut(s)	784, 1022, 1288, 1495, 1807, 1878, 1930
BmtI	GCTAGC	1 cut(s)	1403
BmuI	ACTGGG	2 cut(s)	599, 1013
BpiI	GAAGAC	3 cut(s)	215, 765, 977
BpuMI	CCSGG	3 cut(s)	101, 190, 304
BsaHI	GRCGYC	3 cut(s)	126, 183, 1255
BsaI	GGTCTC	1 cut(s)	1297
BsaJI	CCNNGG	6 cut(s)	256, 302, 330, 500, 544, 1477
Bsc4I	CCNNNNNNNGG	7 cut(s)	59, 238, 331, 336, 507, 743, 2198
Bse118I	RCCGGY	1 cut(s)	2375
Bse1I	ACTGG	7 cut(s)	512, 594, 1019, 1220, 1249, 1744, 2150
Bse3DI	GCAATG	2 cut(s)	2203, 2445
BseBI	CCWGG	7 cut(s)	239, 488, 502, 545, 1559, 1643, 2241
BseDI	CCNNGG	6 cut(s)	256, 302, 330, 500, 544, 1477
BseGI	GGATG	7 cut(s)	457, 652, 793, 1013, 2029, 2206, 2236
BseLI	CCNNNNNNNGG	7 cut(s)	59, 238, 331, 336, 507, 743, 2198
BseMI	GCAATG	2 cut(s)	2203, 2445
BseMII	CTCAG	7 cut(s)	467, 1377, 1653, 1709, 1835, 1914, 2219
BseNI	ACTGG	7 cut(s)	512, 594, 1019, 1220, 1249, 1744, 2150
BseRI	GAGGAG	2 cut(s)	383, 386
BseSI	GKGCMC	1 cut(s)	817
BseXI	GCAGC	3 cut(s)	273, 1645, 2475
BseYI	CCCAGC	1 cut(s)	108
BsgI	GTGCAG	2 cut(s)	633, 1902
Bsh1236I	CGCG	2 cut(s)	245, 383
Bsh1285I	CGRYCG	1 cut(s)	2448
BshFI	GGCC	3 cut(s)	301, 307, 1562
BshNI	GGYRCC	2 cut(s)	267, 1421
BsiEI	CGRYCG	1 cut(s)	2448
BsiHKAI	GWGCWC	3 cut(s)	297, 881, 919
BsiHKCI	CYCGRG	1 cut(s)	458
BsiSI	CCGG	6 cut(s)	101, 179, 189, 298, 304, 2376
BslFI	GGGAC	4 cut(s)	167, 335, 819, 1750
BslI	CCNNNNNNNGG	7 cut(s)	59, 238, 331, 336, 507, 743, 2198
BsmAI	GTCTC	2 cut(s)	132, 1297
BsmFI	GGGAC	4 cut(s)	167, 335, 819, 1750
BsmI	GAATGC	5 cut(s)	383, 757, 1063, 1804, 1834
BsnI	GGCC	3 cut(s)	301, 307, 1562
Bso31I	GGTCTC	1 cut(s)	1297
BsoBI	CYCGRG	1 cut(s)	458
Bsp1286I	GDGCHC	6 cut(s)	297, 459, 817, 881, 919, 1696
Bsp1407I	TGTACA	2 cut(s)	1024, 2467
Bsp143I	GATC	8 cut(s)	76, 466, 698, 856, 1280, 1471, 2185, 2217
BspANI	GGCC	3 cut(s)	301, 307, 1562
BspCNI	CTCAG	7 cut(s)	468, 1378, 1654, 1708, 1834, 1915, 2220
BspFNI	CGCG	2 cut(s)	245, 383
BspHI	TCATGA	1 cut(s)	399
BspLI	GGNNCC	8 cut(s)	99, 269, 302, 323, 324, 1423, 1581, 1704
BspMAI	CTGCAG	2 cut(s)	1420, 1810
BspMI	ACCTGC	1 cut(s)	1409
BspOI	GCTAGC	1 cut(s)	1403
BspPI	GGATC	3 cut(s)	474, 1479, 2180
BspT107I	GGYRCC	2 cut(s)	267, 1421
BspTNI	GGTCTC	1 cut(s)	1297
BsrBI	CCGCTC	1 cut(s)	337
BsrDI	GCAATG	2 cut(s)	2203, 2445
BsrFI	RCCGGY	1 cut(s)	2375
BsrGI	TGTACA	2 cut(s)	1024, 2467
BsrI	ACTGG	7 cut(s)	512, 594, 1019, 1220, 1249, 1744, 2150
BssAI	RCCGGY	1 cut(s)	2375
BssECI	CCNNGG	6 cut(s)	256, 302, 330, 500, 544, 1477
BssMI	GATC	8 cut(s)	76, 466, 698, 856, 1280, 1471, 2185, 2217
BssNAI	GTATAC	1 cut(s)	1007
BssNI	GRCGYC	3 cut(s)	126, 183, 1255
BssT1I	CCWWGG	1 cut(s)	1477
Bst1107I	GTATAC	1 cut(s)	1007
Bst2UI	CCWGG	7 cut(s)	239, 488, 502, 545, 1559, 1643, 2241
Bst4CI	ACNGT	9 cut(s)	62, 434, 1087, 1267, 1456, 1769, 1856, 2215, 2467
Bst6I	CTCTTC	2 cut(s)	1899, 2037
BstACI	GRCGYC	3 cut(s)	126, 183, 1255
BstAPI	GCANNNNNTGC	1 cut(s)	267
BstAUI	TGTACA	2 cut(s)	1024, 2467
BstC8I	GCNNGC	6 cut(s)	385, 919, 1401, 1680, 2105, 2409
BstDEI	CTNAG	8 cut(s)	476, 536, 1386, 1662, 1695, 1821, 1923, 2228
BstDSI	CCRYGG	1 cut(s)	256
BstF5I	GGATG	7 cut(s)	457, 652, 793, 1013, 2029, 2206, 2236
BstFNI	CGCG	2 cut(s)	245, 383
BstHHI	GCGC	1 cut(s)	383
BstKTI	GATC	8 cut(s)	79, 469, 701, 859, 1283, 1474, 2188, 2220
BstMAI	GTCTC	2 cut(s)	132, 1297
BstMBI	GATC	8 cut(s)	76, 466, 698, 856, 1280, 1471, 2185, 2217
BstMCI	CGRYCG	1 cut(s)	2448
BstMWI	GCNNNNNNNGC	8 cut(s)	91, 261, 267, 270, 638, 923, 1415, 2381
BstNI	CCWGG	7 cut(s)	239, 488, 502, 545, 1559, 1643, 2241
BstNSI	RCATGY	1 cut(s)	2085
BstSFI	CTRYAG	6 cut(s)	250, 822, 1070, 1416, 1806, 1855
BstSLI	GKGCMC	1 cut(s)	817
BstUI	CGCG	2 cut(s)	245, 383
BstV1I	GCAGC	3 cut(s)	273, 1645, 2475
BstV2I	GAAGAC	3 cut(s)	215, 765, 977
BstX2I	RGATCY	1 cut(s)	466
BstXI	CCANNNNNNTGG	1 cut(s)	1573
BstYI	RGATCY	1 cut(s)	466
BstZ17I	GTATAC	1 cut(s)	1007
BsuRI	GGCC	3 cut(s)	301, 307, 1562
BtgI	CCRYGG	1 cut(s)	256
BtsCI	GGATG	7 cut(s)	457, 652, 793, 1013, 2029, 2206, 2236
BtsI	GCAGTG	3 cut(s)	1425, 2377, 2470
BtsIMutI	CAGTG	8 cut(s)	587, 1383, 1425, 1995, 2162, 2220, 2377, 2470
BveI	ACCTGC	1 cut(s)	1409
Cac8I	GCNNGC	6 cut(s)	385, 919, 1401, 1680, 2105, 2409
CaiI	CAGNNNCTG	2 cut(s)	219, 507
CciI	TCATGA	1 cut(s)	399
CfoI	GCGC	1 cut(s)	383
Cfr10I	RCCGGY	1 cut(s)	2375
Cfr13I	GGNCC	7 cut(s)	97, 300, 306, 322, 490, 1703, 2110
CseI	GACGC	5 cut(s)	134, 191, 234, 251, 1244
Csp6I	GTAC	3 cut(s)	1025, 1909, 2468
CspCI	CAANNNNNGTGG	2 cut(s)	1372, 1407
CviQI	GTAC	3 cut(s)	1025, 1909, 2468
DdeI	CTNAG	8 cut(s)	476, 536, 1386, 1662, 1695, 1821, 1923, 2228
DpnI	GATC	8 cut(s)	78, 468, 700, 858, 1282, 1473, 2187, 2219
DpnII	GATC	8 cut(s)	76, 466, 698, 856, 1280, 1471, 2185, 2217
DraI	TTTAAA	1 cut(s)	963
DraIII	CACNNNGTG	1 cut(s)	1769
Eam1104I	CTCTTC	2 cut(s)	1899, 2037
EarI	CTCTTC	2 cut(s)	1899, 2037
EciI	GGCGGA	2 cut(s)	221, 1592
Ecl136II	GAGCTC	2 cut(s)	295, 879
Eco130I	CCWWGG	1 cut(s)	1477
Eco24I	GRGCYC	4 cut(s)	297, 459, 881, 1696
Eco31I	GGTCTC	1 cut(s)	1297
Eco32I	GATATC	1 cut(s)	1034
Eco47I	GGWCC	5 cut(s)	97, 322, 490, 1703, 2110
Eco53kI	GAGCTC	2 cut(s)	295, 879
Eco57I	CTGAAG	3 cut(s)	2061, 2099, 2397
Eco88I	CYCGRG	1 cut(s)	458
EcoICRI	GAGCTC	2 cut(s)	295, 879
EcoO109I	RGGNCCY	4 cut(s)	97, 322, 1703, 2110
EcoRII	CCWGG	7 cut(s)	237, 486, 500, 543, 1557, 1641, 2239
EcoRV	GATATC	1 cut(s)	1034
EcoT14I	CCWWGG	1 cut(s)	1477
EcoT38I	GRGCYC	4 cut(s)	297, 459, 881, 1696
ErhI	CCWWGG	1 cut(s)	1477
FalI	AAGNNNNNCTT	4 cut(s)	1896, 1928, 2113, 2145
FaqI	GGGAC	4 cut(s)	167, 335, 819, 1750
FauI	CCCGC	8 cut(s)	99, 144, 257, 330, 376, 440, 1351, 2416
FbaI	TGATCA	2 cut(s)	856, 2217
FblI	GTMKAC	3 cut(s)	1006, 2259, 2448
FokI	GGATG	7 cut(s)	464, 659, 800, 1000, 2036, 2193, 2223
FriOI	GRGCYC	4 cut(s)	297, 459, 881, 1696
FspBI	CTAG	5 cut(s)	623, 969, 1010, 1400, 2285
GlaI	GCGC	1 cut(s)	382
GsaI	CCCAGC	1 cut(s)	112
HaeIII	GGCC	3 cut(s)	301, 307, 1562
HapII	CCGG	6 cut(s)	101, 179, 189, 298, 304, 2376
HgaI	GACGC	5 cut(s)	134, 191, 234, 251, 1244
HhaI	GCGC	1 cut(s)	383
Hin1I	GRCGYC	3 cut(s)	126, 183, 1255
Hin6I	GCGC	1 cut(s)	381
HinP1I	GCGC	1 cut(s)	381
HincII	GTYRAC	1 cut(s)	2449
HindII	GTYRAC	1 cut(s)	2449
HindIII	AAGCTT	2 cut(s)	924, 1407
HinfI	GANTC	6 cut(s)	68, 761, 829, 892, 1248, 1370
HpaII	CCGG	6 cut(s)	101, 179, 189, 298, 304, 2376
HphI	GGTGA	5 cut(s)	446, 803, 898, 1466, 1617
Hpy166II	GTNNAC	7 cut(s)	734, 1007, 1095, 1217, 2260, 2449, 2470
Hpy8I	GTNNAC	7 cut(s)	734, 1007, 1095, 1217, 2260, 2449, 2470
Hpy99I	CGWCG	2 cut(s)	128, 802
HpyCH4III	ACNGT	9 cut(s)	62, 434, 1087, 1267, 1456, 1769, 1856, 2215, 2467
HpyCH4IV	ACGT	1 cut(s)	1725
HpyF10VI	GCNNNNNNNGC	8 cut(s)	91, 261, 267, 270, 638, 923, 1415, 2381
HpyF3I	CTNAG	8 cut(s)	476, 536, 1386, 1662, 1695, 1821, 1923, 2228
HpySE526I	ACGT	1 cut(s)	1725
Hsp92I	GRCGYC	3 cut(s)	126, 183, 1255
HspAI	GCGC	1 cut(s)	381
KflI	GGGWCCC	1 cut(s)	322
Ksp22I	TGATCA	2 cut(s)	856, 2217
Kzo9I	GATC	8 cut(s)	76, 466, 698, 856, 1280, 1471, 2185, 2217
LmnI	GCTCC	7 cut(s)	227, 292, 300, 334, 865, 1227, 1513
Lsp1109I	GCAGC	3 cut(s)	273, 1645, 2475
LweI	GCATC	7 cut(s)	784, 1022, 1288, 1495, 1807, 1878, 1930
MaeI	CTAG	5 cut(s)	623, 969, 1010, 1400, 2285
MaeII	ACGT	1 cut(s)	1725
MaeIII	GTNAC	9 cut(s)	25, 62, 539, 826, 1037, 1081, 1120, 1955, 1969
MalI	GATC	8 cut(s)	78, 468, 700, 858, 1282, 1473, 2187, 2219
MbiI	CCGCTC	1 cut(s)	337
MboI	GATC	8 cut(s)	76, 466, 698, 856, 1280, 1471, 2185, 2217
MfeI	CAATTG	4 cut(s)	657, 1128, 1259, 1746
MflI	RGATCY	1 cut(s)	466
MhlI	GDGCHC	6 cut(s)	297, 459, 817, 881, 919, 1696
MluI	ACGCGT	1 cut(s)	243
MlyI	GAGTC	2 cut(s)	755, 823
MmeI	TCCRAC	3 cut(s)	396, 444, 843
MroXI	GAANNNNTTC	1 cut(s)	530
MseI	TTAA	5 cut(s)	962, 1236, 1647, 1839, 2051
MslI	CAYNNNNRTG	2 cut(s)	1337, 1793
MspA1I	CMGCKG	2 cut(s)	264, 1502
MspI	CCGG	6 cut(s)	101, 179, 189, 298, 304, 2376
MunI	CAATTG	4 cut(s)	657, 1128, 1259, 1746
Mva1269I	GAATGC	5 cut(s)	383, 757, 1063, 1804, 1834
MvaI	CCWGG	7 cut(s)	239, 488, 502, 545, 1559, 1643, 2241
MvnI	CGCG	2 cut(s)	245, 383
MwoI	GCNNNNNNNGC	8 cut(s)	91, 261, 267, 270, 638, 923, 1415, 2381
NciI	CCSGG	3 cut(s)	101, 190, 304
NdeII	GATC	8 cut(s)	76, 466, 698, 856, 1280, 1471, 2185, 2217
NheI	GCTAGC	1 cut(s)	1399
NlaIV	GGNNCC	8 cut(s)	99, 269, 302, 323, 324, 1423, 1581, 1704
NmeAIII	GCCGAG	1 cut(s)	1564
NmuCI	GTSAC	4 cut(s)	62, 539, 826, 1955
NspI	RCATGY	1 cut(s)	2085
PagI	TCATGA	1 cut(s)	399
PaqCI	CACCTGC	1 cut(s)	1409
PcsI	WCGNNNNNNNCGW	2 cut(s)	72, 814
PctI	GAATGC	5 cut(s)	383, 757, 1063, 1804, 1834
PdmI	GAANNNNTTC	1 cut(s)	530
PfeI	GAWTC	4 cut(s)	68, 892, 1248, 1370
PflMI	CCANNNNNTGG	3 cut(s)	507, 743, 2198
PfoI	TCCNGGA	1 cut(s)	2239
PleI	GAGTC	2 cut(s)	755, 823
PpsI	GAGTC	2 cut(s)	755, 823
PpuMI	RGGWCCY	4 cut(s)	97, 322, 1703, 2110
PshBI	ATTAAT	1 cut(s)	1839
PsiI	TTATAA	1 cut(s)	1379
Psp124BI	GAGCTC	2 cut(s)	297, 881
Psp5II	RGGWCCY	4 cut(s)	97, 322, 1703, 2110
Psp6I	CCWGG	7 cut(s)	237, 486, 500, 543, 1557, 1641, 2239
PspFI	CCCAGC	1 cut(s)	108
PspGI	CCWGG	7 cut(s)	237, 486, 500, 543, 1557, 1641, 2239
PspN4I	GGNNCC	8 cut(s)	99, 269, 302, 323, 324, 1423, 1581, 1704
PspPI	GGNCC	7 cut(s)	97, 300, 306, 322, 490, 1703, 2110
PspPPI	RGGWCCY	4 cut(s)	97, 322, 1703, 2110
PsrI	GAACNNNNNNTAC	2 cut(s)	672, 704
PstI	CTGCAG	2 cut(s)	1420, 1810
PstNI	CAGNNNCTG	2 cut(s)	219, 507
PsuI	RGATCY	1 cut(s)	466
PvuII	CAGCTG	1 cut(s)	1502
RsaI	GTAC	3 cut(s)	1026, 1910, 2469
RsaNI	GTAC	3 cut(s)	1025, 1909, 2468
RseI	CAYNNNNRTG	2 cut(s)	1337, 1793
SacI	GAGCTC	2 cut(s)	297, 881
SalI	GTCGAC	1 cut(s)	2447
SaqAI	TTAA	5 cut(s)	962, 1236, 1647, 1839, 2051
Sau3AI	GATC	8 cut(s)	76, 466, 698, 856, 1280, 1471, 2185, 2217
Sau96I	GGNCC	7 cut(s)	97, 300, 306, 322, 490, 1703, 2110
SchI	GAGTC	2 cut(s)	755, 823
SduI	GDGCHC	6 cut(s)	297, 459, 817, 881, 919, 1696
SfaNI	GCATC	7 cut(s)	784, 1022, 1288, 1495, 1807, 1878, 1930
SfcI	CTRYAG	6 cut(s)	250, 822, 1070, 1416, 1806, 1855
SinI	GGWCC	5 cut(s)	97, 322, 490, 1703, 2110
SmiMI	CAYNNNNRTG	2 cut(s)	1337, 1793
SmlI	CTYRAG	1 cut(s)	2492
SmoI	CTYRAG	1 cut(s)	2492
SspMI	CTAG	5 cut(s)	623, 969, 1010, 1400, 2285
SstI	GAGCTC	2 cut(s)	297, 881
StyI	CCWWGG	1 cut(s)	1477
TaaI	ACNGT	9 cut(s)	62, 434, 1087, 1267, 1456, 1769, 1856, 2215, 2467
TaiI	ACGT	1 cut(s)	1728
TaqI	TCGA	3 cut(s)	1270, 2301, 2448
TatI	WGTACW	2 cut(s)	1024, 2467
TauI	GCSGC	7 cut(s)	115, 118, 168, 188, 237, 273, 353
TfiI	GAWTC	4 cut(s)	68, 892, 1248, 1370
Tru1I	TTAA	5 cut(s)	962, 1236, 1647, 1839, 2051
Tru9I	TTAA	5 cut(s)	962, 1236, 1647, 1839, 2051
TscAI	CASTG	8 cut(s)	594, 1390, 1432, 2002, 2162, 2220, 2377, 2477
TseFI	GTSAC	4 cut(s)	62, 539, 826, 1955
TseI	GCWGC	3 cut(s)	261, 1658, 2488
Tsp45I	GTSAC	4 cut(s)	62, 539, 826, 1955
TspDTI	ATGAA	4 cut(s)	1811, 2016, 2040, 2195
TspGWI	ACGGA	2 cut(s)	422, 2263
TspRI	CASTG	8 cut(s)	594, 1390, 1432, 2002, 2162, 2220, 2377, 2477
Van91I	CCANNNNNTGG	3 cut(s)	507, 743, 2198
VpaK11BI	GGWCC	5 cut(s)	97, 322, 490, 1703, 2110
VspI	ATTAAT	1 cut(s)	1839
XapI	RAATTY	2 cut(s)	1196, 1432
XceI	RCATGY	1 cut(s)	2085
XcmI	CCANNNNNNNNNTGG	2 cut(s)	951, 1570
XmiI	GTMKAC	3 cut(s)	1006, 2259, 2448
XmnI	GAANNNNTTC	1 cut(s)	530
XspI	CTAG	5 cut(s)	623, 969, 1010, 1400, 2285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.