Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0004650

Physical Location & Seq

Genomic Coordinates Reverse (-)

19501688 .. 19504280

Gene Structure 2593 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G186600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 951 bp

ATGGCGACTCTCAGAGTACCAGATGTGGTTCCTTCTCCAGTGGAAGATGCTGAACAACTCCGCAAAGCTTTTGAAGGATGGGGGACAAATGAGGCGTTGATCATTTCGATATTGACTCACAGGAATGCAGCTCAGAGAAAATTAATTCAGCAGGCATATGCAGAAACTTATGGGGAAGAGCTTCTTAAGTCACTGGACAAAGAGCTCTCAAGTGAATTTGAGAGGGCTGTGCTGCTGTGGACACTGGTCCCTGCTGAGCGTGATGCATTTTTGGCTAATGAAGCTACAAAGAGGTTCACTTCAAGCAACAAAGTGCTCTTGGAAATAGCTACTACTAGGTCTTCCCATGACCTGTTGCTGGTAAAGCAGGCGTATCATGCGCGTTTCAAGAAATCCCTTGAAGAAGATGTGGCATACCATACATCTGGAGACTTGCGCAAGCTTTTGGTTCCTCTTTTGAGCACTTACCGATACGAGGGAGATGAGATCAGCGTGCCCTTGGCGAAGAAAGAGGCTAAGATACTTCATGAGAAAATCTCAGACAAAGCCTACAATGATGAGGAGCTCATCAGGATCCTCTCTACCAGGAGTAAAGCACAGCTGAATGCAACCTTGAATCACTACAACAACGAGTTTGGCAATGCCATTAACAAGGATTTGAAGGCTGATAAAGATGATGAGTTCCTCCTGTTACTGAGGCAAACAATTAAAAGCTTGACCGTCCCTGAAAAATACTTTGAGAAGGTTCTGCGCCTGGCTATCAACAAGCTCGGGACGGACGAAGGGGCTCTTACTAGGGTTGTCACCACCCGGGCGGAGGTTGACTTGCATCGCATTAAACAAGAATATCATCGCAGGAACAGTGTTCCTTTGGACCAGGCAATTGTTAAAGACACTTCTGGAGACTATGAGAAGTTTCTTGTGGAACTGGTTGGACATGGAGATGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006810 GO:0006950 GO:0006970 GO:0008150 GO:0008643 GO:0009266 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009579 GO:0009628 GO:0009651 GO:0010035 GO:0015774 GO:0016020 GO:0033036 GO:0033037 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050896 GO:0051179 GO:0051234 GO:0071702 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Annexin

Protein Analysis

317

Amino Acids

35.94

Weight (kDa)

6.19

Isoelectric Point (pI)

36.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G35720 AT5G65020 AT5G65020
fragaria_vesca	FvH4_1g20930 FvH4_1g20930 FvH4_1g20930 FvH4_1g20930 FvH4_1g20930 FvH4_1g20930 FvH4_1g20930
malus_domestica	MD01G1029100.v1.1 MD04G1000900.v1.1
prunus_persica	Prupe.6G186600_v2.0.a1
pyrus_communis	pycom01g05720
rosa_chinensis	RchiOBHm_Chr2g0114411 RchiOBHm_Chr2g0114431
rosa_laevigata	RLG00000018099 RLG00000018100
rosa_multiflora	Rmu_co8507663.1_g000001 Rmu_co8512843.1_g000002 Rmu_sc0000431.1_g000032
rosa_roxburghii	Rroxscaffold_2G00130130 Rroxscaffold_2G00130140
rosa_rugosa	Rorug02G0190300
rosa_samantha	Rh2AG247400 Rh2BG257200 Rh2BG257300 Rh2CG250900 Rh2DG255400
rosa_wichuraiana	Rw2G019220 Rw2G019230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	437
AccII	CGCG	1 cut(s)	382
AciI	CCGC	2 cut(s)	61, 815
AclWI	GGATC	2 cut(s)	568, 581
AcsI	RAATTY	1 cut(s)	215
AfaI	GTAC	1 cut(s)	18
AfiI	CCNNNNNNNGG	3 cut(s)	358, 475, 817
AflII	CTTAAG	1 cut(s)	185
AgsI	TTSAA	6 cut(s)	74, 303, 388, 401, 616, 661
AjnI	CCWGG	3 cut(s)	584, 753, 876
Alw21I	GWGCWC	4 cut(s)	207, 318, 464, 567
Alw26I	GTCTC	2 cut(s)	423, 897
AlwI	GGATC	2 cut(s)	568, 581
Ama87I	CYCGRG	2 cut(s)	770, 810
ApeKI	GCWGC	2 cut(s)	128, 232
ApoI	RAATTY	1 cut(s)	215
AseI	ATTAAT	1 cut(s)	143
Asp700I	GAANNNNTTC	1 cut(s)	180
AspLEI	GCGC	3 cut(s)	382, 438, 753
AspS9I	GGNCC	2 cut(s)	247, 874
AsuC2I	CCSGG	2 cut(s)	811, 812
AsuHPI	GGTGA	1 cut(s)	796
AvaI	CYCGRG	2 cut(s)	770, 810
AvaII	GGWCC	2 cut(s)	247, 874
BaeGI	GKGCMC	1 cut(s)	498
BamHI	GGATCC	1 cut(s)	573
BanII	GRGCYC	3 cut(s)	207, 567, 790
BbsI	GAAGAC	1 cut(s)	333
Bbv12I	GWGCWC	4 cut(s)	207, 318, 464, 567
BbvI	GCAGC	2 cut(s)	140, 219
BccI	CCATC	1 cut(s)	72
BciT130I	CCWGG	3 cut(s)	586, 755, 878
BclI	TGATCA	1 cut(s)	99
BcnI	CCSGG	2 cut(s)	811, 812
BcoDI	GTCTC	2 cut(s)	423, 897
BfaI	CTAG	2 cut(s)	336, 795
BfrI	CTTAAG	1 cut(s)	185
BisI	GCNGC	2 cut(s)	129, 233
BlpI	GCTNAGC	1 cut(s)	255
BlsI	GCNGC	2 cut(s)	130, 234
Bme1390I	CCNGG	5 cut(s)	586, 755, 811, 812, 878
Bme18I	GGWCC	2 cut(s)	247, 874
BmeT110I	CYCGRG	2 cut(s)	770, 810
BmgT120I	GGNCC	2 cut(s)	247, 874
BmiI	GGNNCC	4 cut(s)	30, 249, 450, 575
BmrFI	CCNGG	5 cut(s)	586, 755, 811, 812, 878
BmsI	GCATC	4 cut(s)	37, 253, 838, 934
BoxI	GACNNNNGTC	1 cut(s)	245
BpiI	GAAGAC	1 cut(s)	333
BplI	GAGNNNNNCTC	2 cut(s)	521, 553
BpmI	CTGGAG	3 cut(s)	21, 447, 921
Bpu1102I	GCTNAGC	1 cut(s)	255
BpuEI	CTTGAG	1 cut(s)	193
BpuMI	CCSGG	2 cut(s)	811, 812
BsaJI	CCNNGG	2 cut(s)	498, 810
Bsc4I	CCNNNNNNNGG	3 cut(s)	358, 475, 817
Bse1I	ACTGG	4 cut(s)	38, 198, 249, 933
Bse3DI	GCAATG	1 cut(s)	646
BseBI	CCWGG	3 cut(s)	586, 755, 878
BseDI	CCNNGG	2 cut(s)	498, 810
BseGI	GGATG	1 cut(s)	83
BseLI	CCNNNNNNNGG	3 cut(s)	358, 475, 817
BseMI	GCAATG	1 cut(s)	646
BseMII	CTCAG	5 cut(s)	25, 146, 246, 552, 686
BseNI	ACTGG	4 cut(s)	38, 198, 249, 933
BseRI	GAGGAG	1 cut(s)	575
BseSI	GKGCMC	1 cut(s)	498
BseXI	GCAGC	2 cut(s)	140, 219
Bsh1236I	CGCG	1 cut(s)	382
BsiHKAI	GWGCWC	4 cut(s)	207, 318, 464, 567
BsiHKCI	CYCGRG	2 cut(s)	770, 810
BsiSI	CCGG	1 cut(s)	811
BslFI	GGGAC	4 cut(s)	97, 233, 707, 787
BslI	CCNNNNNNNGG	3 cut(s)	358, 475, 817
BsmAI	GTCTC	2 cut(s)	423, 897
BsmFI	GGGAC	4 cut(s)	97, 233, 707, 787
BsmI	GAATGC	2 cut(s)	130, 610
BsoBI	CYCGRG	2 cut(s)	770, 810
Bsp1286I	GDGCHC	6 cut(s)	207, 318, 464, 498, 567, 790
Bsp143I	GATC	3 cut(s)	99, 486, 573
Bsp1720I	GCTNAGC	1 cut(s)	255
BspACI	CCGC	2 cut(s)	61, 815
BspCNI	CTCAG	5 cut(s)	24, 145, 247, 551, 687
BspFNI	CGCG	1 cut(s)	382
BspHI	TCATGA	1 cut(s)	526
BspLI	GGNNCC	4 cut(s)	30, 249, 450, 575
BspPI	GGATC	2 cut(s)	568, 581
BspQI	GCTCTTC	1 cut(s)	171
BspTI	CTTAAG	1 cut(s)	185
BsrDI	GCAATG	1 cut(s)	646
BsrI	ACTGG	4 cut(s)	38, 198, 249, 933
BssECI	CCNNGG	2 cut(s)	498, 810
BssMI	GATC	3 cut(s)	99, 486, 573
BssT1I	CCWWGG	1 cut(s)	498
Bst2UI	CCWGG	3 cut(s)	586, 755, 878
Bst4CI	ACNGT	2 cut(s)	721, 863
Bst6I	CTCTTC	1 cut(s)	171
BstAFI	CTTAAG	1 cut(s)	185
BstC8I	GCNNGC	4 cut(s)	153, 369, 440, 494
BstDEI	CTNAG	6 cut(s)	11, 132, 255, 516, 538, 695
BstF5I	GGATG	1 cut(s)	83
BstFNI	CGCG	1 cut(s)	382
BstHHI	GCGC	3 cut(s)	382, 438, 753
BstKTI	GATC	3 cut(s)	102, 489, 576
BstMAI	GTCTC	2 cut(s)	423, 897
BstMBI	GATC	3 cut(s)	99, 486, 573
BstMWI	GCNNNNNNNGC	4 cut(s)	272, 281, 364, 377
BstNI	CCWGG	3 cut(s)	586, 755, 878
BstPAI	GACNNNNGTC	1 cut(s)	245
BstSCI	CCNGG	5 cut(s)	584, 753, 809, 810, 876
BstSLI	GKGCMC	1 cut(s)	498
BstUI	CGCG	1 cut(s)	382
BstV1I	GCAGC	2 cut(s)	140, 219
BstV2I	GAAGAC	1 cut(s)	333
BstX2I	RGATCY	1 cut(s)	573
BstXI	CCANNNNNNTGG	1 cut(s)	425
BstYI	RGATCY	1 cut(s)	573
BtgZI	GCGATG	2 cut(s)	815, 836
BtsCI	GGATG	1 cut(s)	83
BtsIMutI	CAGTG	4 cut(s)	45, 191, 242, 868
Cac8I	GCNNGC	4 cut(s)	153, 369, 440, 494
CciI	TCATGA	1 cut(s)	526
CfoI	GCGC	3 cut(s)	382, 438, 753
Cfr13I	GGNCC	2 cut(s)	247, 874
Cfr9I	CCCGGG	1 cut(s)	810
Csp6I	GTAC	1 cut(s)	17
CviAII	CATG	4 cut(s)	347, 377, 527, 938
CviQI	GTAC	1 cut(s)	17
DdeI	CTNAG	6 cut(s)	11, 132, 255, 516, 538, 695
DpnI	GATC	3 cut(s)	101, 488, 575
DpnII	GATC	3 cut(s)	99, 486, 573
Eam1104I	CTCTTC	1 cut(s)	171
EarI	CTCTTC	1 cut(s)	171
EciI	GGCGGA	1 cut(s)	830
Ecl136II	GAGCTC	2 cut(s)	205, 565
Eco130I	CCWWGG	1 cut(s)	498
Eco24I	GRGCYC	3 cut(s)	207, 567, 790
Eco47I	GGWCC	2 cut(s)	247, 874
Eco53kI	GAGCTC	2 cut(s)	205, 565
Eco88I	CYCGRG	2 cut(s)	770, 810
EcoICRI	GAGCTC	2 cut(s)	205, 565
EcoRII	CCWGG	3 cut(s)	584, 753, 876
EcoT14I	CCWWGG	1 cut(s)	498
EcoT22I	ATGCAT	1 cut(s)	268
EcoT38I	GRGCYC	3 cut(s)	207, 567, 790
ErhI	CCWWGG	1 cut(s)	498
FaeI	CATG	4 cut(s)	350, 380, 530, 941
FalI	AAGNNNNNCTT	4 cut(s)	168, 200, 774, 806
FaqI	GGGAC	4 cut(s)	97, 233, 707, 787
FatI	CATG	4 cut(s)	346, 376, 526, 937
FauNDI	CATATG	1 cut(s)	157
FbaI	TGATCA	1 cut(s)	99
Fnu4HI	GCNGC	2 cut(s)	129, 233
FokI	GGATG	1 cut(s)	90
FriOI	GRGCYC	3 cut(s)	207, 567, 790
Fsp4HI	GCNGC	2 cut(s)	129, 233
FspBI	CTAG	2 cut(s)	336, 795
FspI	TGCGCA	1 cut(s)	437
GlaI	GCGC	3 cut(s)	381, 437, 752
GluI	GCNGC	2 cut(s)	129, 233
GsuI	CTGGAG	3 cut(s)	21, 447, 921
HapII	CCGG	1 cut(s)	811
HhaI	GCGC	3 cut(s)	382, 438, 753
Hin1II	CATG	4 cut(s)	350, 380, 530, 941
Hin6I	GCGC	3 cut(s)	380, 436, 751
HinP1I	GCGC	3 cut(s)	380, 436, 751
HincII	GTYRAC	1 cut(s)	823
HindII	GTYRAC	1 cut(s)	823
HindIII	AAGCTT	3 cut(s)	66, 440, 712
HinfI	GANTC	3 cut(s)	7, 115, 616
HpaII	CCGG	1 cut(s)	811
HphI	GGTGA	1 cut(s)	796
Hpy166II	GTNNAC	3 cut(s)	240, 297, 823
Hpy188I	TCNGA	3 cut(s)	14, 135, 541
Hpy188III	TCNNGA	6 cut(s)	388, 426, 527, 571, 772, 900
Hpy8I	GTNNAC	3 cut(s)	240, 297, 823
HpyAV	CCTTC	5 cut(s)	42, 68, 655, 736, 776
HpyCH4III	ACNGT	2 cut(s)	721, 863
HpyCH4V	TGCA	5 cut(s)	128, 161, 266, 608, 829
HpyF10VI	GCNNNNNNNGC	4 cut(s)	272, 281, 364, 377
HpyF3I	CTNAG	6 cut(s)	11, 132, 255, 516, 538, 695
Hsp92II	CATG	4 cut(s)	350, 380, 530, 941
HspAI	GCGC	3 cut(s)	380, 436, 751
Ksp22I	TGATCA	1 cut(s)	99
Kzo9I	GATC	3 cut(s)	99, 486, 573
LguI	GCTCTTC	1 cut(s)	171
LmnI	GCTCC	1 cut(s)	562
Lsp1109I	GCAGC	2 cut(s)	140, 219
LweI	GCATC	4 cut(s)	37, 253, 838, 934
MaeI	CTAG	2 cut(s)	336, 795
MaeIII	GTNAC	3 cut(s)	189, 690, 802
MalI	GATC	3 cut(s)	101, 488, 575
MboI	GATC	3 cut(s)	99, 486, 573
MboII	GAAGA	6 cut(s)	56, 188, 333, 413, 416, 517
MfeI	CAATTG	1 cut(s)	882
MflI	RGATCY	1 cut(s)	573
MhlI	GDGCHC	6 cut(s)	207, 318, 464, 498, 567, 790
MluCI	AATT	5 cut(s)	140, 144, 215, 705, 882
MlyI	GAGTC	1 cut(s)	109
MmeI	TCCRAC	1 cut(s)	913
Mph1103I	ATGCAT	1 cut(s)	268
MroXI	GAANNNNTTC	1 cut(s)	180
MseI	TTAA	6 cut(s)	143, 186, 648, 708, 837, 888
MslI	CAYNNNNRTG	2 cut(s)	123, 942
MspA1I	CMGCKG	1 cut(s)	601
MspCI	CTTAAG	1 cut(s)	185
MspI	CCGG	1 cut(s)	811
MspR9I	CCNGG	5 cut(s)	586, 755, 811, 812, 878
MunI	CAATTG	1 cut(s)	882
Mva1269I	GAATGC	2 cut(s)	130, 610
MvaI	CCWGG	3 cut(s)	586, 755, 878
MvnI	CGCG	1 cut(s)	382
MwoI	GCNNNNNNNGC	4 cut(s)	272, 281, 364, 377
NciI	CCSGG	2 cut(s)	811, 812
NdeI	CATATG	1 cut(s)	157
NdeII	GATC	3 cut(s)	99, 486, 573
NlaIII	CATG	4 cut(s)	350, 380, 530, 941
NlaIV	GGNNCC	4 cut(s)	30, 249, 450, 575
NmuCI	GTSAC	2 cut(s)	189, 802
NsbI	TGCGCA	1 cut(s)	437
NsiI	ATGCAT	1 cut(s)	268
PagI	TCATGA	1 cut(s)	526
PciSI	GCTCTTC	1 cut(s)	171
PcsI	WCGNNNNNNNCGW	1 cut(s)	777
PctI	GAATGC	2 cut(s)	130, 610
PdmI	GAANNNNTTC	1 cut(s)	180
PfeI	GAWTC	1 cut(s)	616
PkrI	GCNGC	2 cut(s)	130, 234
PleI	GAGTC	1 cut(s)	109
PpsI	GAGTC	1 cut(s)	109
PshAI	GACNNNNGTC	1 cut(s)	245
PshBI	ATTAAT	1 cut(s)	143
Psp124BI	GAGCTC	2 cut(s)	207, 567
Psp6I	CCWGG	3 cut(s)	584, 753, 876
PspGI	CCWGG	3 cut(s)	584, 753, 876
PspN4I	GGNNCC	4 cut(s)	30, 249, 450, 575
PspPI	GGNCC	2 cut(s)	247, 874
PsuI	RGATCY	1 cut(s)	573
PvuII	CAGCTG	1 cut(s)	601
RsaI	GTAC	1 cut(s)	18
RsaNI	GTAC	1 cut(s)	17
RseI	CAYNNNNRTG	2 cut(s)	123, 942
SacI	GAGCTC	2 cut(s)	207, 567
SapI	GCTCTTC	1 cut(s)	171
SaqAI	TTAA	6 cut(s)	143, 186, 648, 708, 837, 888
SatI	GCNGC	2 cut(s)	129, 233
Sau3AI	GATC	3 cut(s)	99, 486, 573
Sau96I	GGNCC	2 cut(s)	247, 874
SchI	GAGTC	1 cut(s)	109
ScrFI	CCNGG	5 cut(s)	586, 755, 811, 812, 878
SduI	GDGCHC	6 cut(s)	207, 318, 464, 498, 567, 790
SfaNI	GCATC	4 cut(s)	37, 253, 838, 934
SinI	GGWCC	2 cut(s)	247, 874
SmaI	CCCGGG	1 cut(s)	812
SmiMI	CAYNNNNRTG	2 cut(s)	123, 942
SmlI	CTYRAG	2 cut(s)	185, 208
SmoI	CTYRAG	2 cut(s)	185, 208
Sse9I	AATT	5 cut(s)	140, 144, 215, 705, 882
SsiI	CCGC	2 cut(s)	61, 815
SspMI	CTAG	2 cut(s)	336, 795
SstI	GAGCTC	2 cut(s)	207, 567
StyD4I	CCNGG	5 cut(s)	584, 753, 809, 810, 876
StyI	CCWWGG	1 cut(s)	498
TaaI	ACNGT	2 cut(s)	721, 863
TaqI	TCGA	1 cut(s)	107
TasI	AATT	5 cut(s)	140, 144, 215, 705, 882
TfiI	GAWTC	1 cut(s)	616
Tru1I	TTAA	6 cut(s)	143, 186, 648, 708, 837, 888
Tru9I	TTAA	6 cut(s)	143, 186, 648, 708, 837, 888
TscAI	CASTG	4 cut(s)	45, 198, 249, 868
TseFI	GTSAC	2 cut(s)	189, 802
TseI	GCWGC	2 cut(s)	128, 232
Tsp45I	GTSAC	2 cut(s)	189, 802
TspDTI	ATGAA	2 cut(s)	294, 515
TspGWI	ACGGA	1 cut(s)	791
TspMI	CCCGGG	1 cut(s)	810
TspRI	CASTG	4 cut(s)	45, 198, 249, 868
Vha464I	CTTAAG	1 cut(s)	185
VpaK11BI	GGWCC	2 cut(s)	247, 874
VspI	ATTAAT	1 cut(s)	143
XapI	RAATTY	1 cut(s)	215
XmaI	CCCGGG	1 cut(s)	810
XmnI	GAANNNNTTC	1 cut(s)	180
XspI	CTAG	2 cut(s)	336, 795
Zsp2I	ATGCAT	1 cut(s)	268

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.