Rorug02G0190300

Annexin D2-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
17755011 .. 17756240
1230 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0190300.1

Sequence Viewer

Length: 471 bp
ATGGAAATTCTTGGCTTTGGGACTGTTTGTTTCATCTTTTGGGAAATTGGGTTTCGGTTCGCTTTCGGCGGGTCAAACTGGCCCACTTCACCTCAGTTTGATGATTTCGATTGGGTTTCTGTGGACGGGAGTGAAGATGTTGAGAAAGCTCATGGGTTTCTTGATGACTTTGTTCTTGGACCTGTTCCTTCTGGAGATGAAGTTCACAACGCTGTTTCTGCTCTTCGACACGAGTATCTTCATTTGGGACAGAATCAGATTGGATGGAGCCTTCTGTTTACCTTTGTAATTCCCAGCCTCAGGGATGAGGCTTTCAGTTTATTACAGAATGAGTCATTTGTTCAGAGAATAGTGGTTTCATTGTCATCTGATAGAGCAGTTTGGGATGCTGTGATGAATAATGAGGTGGTGAGGGAGCTCAGGGAATCCTTCTATGCAGTTGCCTACTTGATTATGAATGTTCCCATGTAA

Protein Analysis

156

Amino Acids

17.7

Weight (kDa)

4.34

Isoelectric Point (pI)

38.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 69
AcsI RAATTY 1 cut(s) 6
AfiI CCNNNNNNNGG 1 cut(s) 300
AloI GAACNNNNNNTCC 2 cut(s) 186, 218
AluBI AGCT 2 cut(s) 149, 418
AluI AGCT 2 cut(s) 149, 418
Alw21I GWGCWC 1 cut(s) 420
AoxI GGCC 1 cut(s) 80
ApoI RAATTY 1 cut(s) 6
AspS9I GGNCC 2 cut(s) 81, 179
AsuHPI GGTGA 2 cut(s) 81, 421
AvaII GGWCC 1 cut(s) 179
AxyI CCTNAGG 1 cut(s) 299
BaeI ACNNNNGTAYC 2 cut(s) 218, 251
BanII GRGCYC 1 cut(s) 420
BauI CACGAG 1 cut(s) 230
Bbv12I GWGCWC 1 cut(s) 420
BccI CCATC 1 cut(s) 258
Bme18I GGWCC 1 cut(s) 179
BmgT120I GGNCC 2 cut(s) 81, 179
BmiI GGNNCC 1 cut(s) 269
BmsI GCATC 1 cut(s) 376
BpmI CTGGAG 1 cut(s) 213
Bpu10I CCTNAGC 1 cut(s) 419
BsaXI ACNNNNNCTCC 2 cut(s) 186, 216
Bsc4I CCNNNNNNNGG 1 cut(s) 300
Bse1I ACTGG 1 cut(s) 83
Bse21I CCTNAGG 1 cut(s) 299
BseGI GGATG 3 cut(s) 269, 310, 391
BseLI CCNNNNNNNGG 1 cut(s) 300
BseMII CTCAG 3 cut(s) 107, 313, 433
BseNI ACTGG 1 cut(s) 83
BseYI CCCAGC 1 cut(s) 293
BshFI GGCC 1 cut(s) 82
BsiHKAI GWGCWC 1 cut(s) 420
BslFI GGGAC 2 cut(s) 34, 261
BslI CCNNNNNNNGG 1 cut(s) 300
BsmFI GGGAC 2 cut(s) 34, 261
BsnI GGCC 1 cut(s) 82
Bsp1286I GDGCHC 1 cut(s) 420
BspACI CCGC 1 cut(s) 69
BspANI GGCC 1 cut(s) 82
BspCNI CTCAG 3 cut(s) 106, 312, 432
BspLI GGNNCC 1 cut(s) 269
BspQI GCTCTTC 1 cut(s) 228
BsrI ACTGG 1 cut(s) 83
BssSI CACGAG 1 cut(s) 230
Bst2BI CACGAG 1 cut(s) 230
Bst4CI ACNGT 1 cut(s) 25
Bst6I CTCTTC 1 cut(s) 228
BstDEI CTNAG 3 cut(s) 93, 299, 419
BstF5I GGATG 3 cut(s) 269, 310, 391
BstMWI GCNNNNNNNGC 1 cut(s) 218
Bsu36I CCTNAGG 1 cut(s) 299
BsuRI GGCC 1 cut(s) 82
BtsCI GGATG 3 cut(s) 269, 310, 391
Cfr13I GGNCC 2 cut(s) 81, 179
CviAII CATG 2 cut(s) 152, 466
CviJI RGCY 7 cut(s) 15, 82, 149, 270, 297, 311, 418
CviKI_1 RGCY 7 cut(s) 15, 82, 149, 270, 297, 311, 418
DdeI CTNAG 3 cut(s) 93, 299, 419
Eam1104I CTCTTC 1 cut(s) 228
EarI CTCTTC 1 cut(s) 228
Ecl136II GAGCTC 1 cut(s) 418
Eco24I GRGCYC 1 cut(s) 420
Eco47I GGWCC 1 cut(s) 179
Eco53kI GAGCTC 1 cut(s) 418
Eco81I CCTNAGG 1 cut(s) 299
EcoICRI GAGCTC 1 cut(s) 418
EcoT38I GRGCYC 1 cut(s) 420
FaeI CATG 2 cut(s) 155, 469
FaiI YATR 4 cut(s) 153, 435, 455, 467
FaqI GGGAC 2 cut(s) 34, 261
FatI CATG 2 cut(s) 151, 465
FauI CCCGC 1 cut(s) 62
FokI GGATG 3 cut(s) 276, 317, 398
FriOI GRGCYC 1 cut(s) 420
GsaI CCCAGC 1 cut(s) 297
GsuI CTGGAG 1 cut(s) 213
HaeIII GGCC 1 cut(s) 82
Hin1II CATG 2 cut(s) 155, 469
HinfI GANTC 3 cut(s) 253, 332, 425
HphI GGTGA 2 cut(s) 81, 421
Hpy166II GTNNAC 3 cut(s) 124, 205, 279
Hpy188I TCNGA 3 cut(s) 258, 345, 370
Hpy188III TCNNGA 2 cut(s) 161, 192
Hpy8I GTNNAC 3 cut(s) 124, 205, 279
HpyAV CCTTC 3 cut(s) 198, 281, 439
HpyCH4III ACNGT 1 cut(s) 25
HpyCH4V TGCA 1 cut(s) 437
HpyF10VI GCNNNNNNNGC 1 cut(s) 218
HpyF3I CTNAG 3 cut(s) 93, 299, 419
Hsp92II CATG 2 cut(s) 155, 469
LguI GCTCTTC 1 cut(s) 228
LmnI GCTCC 2 cut(s) 267, 415
LpnPI CCDG 6 cut(s) 64, 177, 195, 286, 307, 406
LweI GCATC 1 cut(s) 376
MboII GAAGA 3 cut(s) 146, 215, 230
MhlI GDGCHC 1 cut(s) 420
MluCI AATT 3 cut(s) 6, 45, 288
MlyI GAGTC 1 cut(s) 341
MnlI CCTC 5 cut(s) 102, 301, 308, 397, 405
MwoI GCNNNNNNNGC 1 cut(s) 218
NlaIII CATG 2 cut(s) 155, 469
NlaIV GGNNCC 1 cut(s) 269
PciSI GCTCTTC 1 cut(s) 228
PfeI GAWTC 2 cut(s) 253, 425
PleI GAGTC 1 cut(s) 340
PpsI GAGTC 1 cut(s) 340
Psp124BI GAGCTC 1 cut(s) 420
PspFI CCCAGC 1 cut(s) 293
PspN4I GGNNCC 1 cut(s) 269
PspPI GGNCC 2 cut(s) 81, 179
SacI GAGCTC 1 cut(s) 420
SapI GCTCTTC 1 cut(s) 228
Sau96I GGNCC 2 cut(s) 81, 179
SchI GAGTC 1 cut(s) 341
SduI GDGCHC 1 cut(s) 420
SetI ASST 6 cut(s) 94, 151, 184, 284, 408, 420
SfaNI GCATC 1 cut(s) 376
SinI GGWCC 1 cut(s) 179
Sse9I AATT 3 cut(s) 6, 45, 288
SsiI CCGC 1 cut(s) 69
SstI GAGCTC 1 cut(s) 420
TaaI ACNGT 1 cut(s) 25
TaqI TCGA 2 cut(s) 108, 226
TasI AATT 3 cut(s) 6, 45, 288
TfiI GAWTC 2 cut(s) 253, 425
TspDTI ATGAA 6 cut(s) 22, 213, 230, 348, 410, 470
VpaK11BI GGWCC 1 cut(s) 179
XapI RAATTY 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.