Prupe.6G316800_v2.0.a1

phosphatase 2C

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
28185547 .. 28188870
3324 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G316800.3

Sequence Viewer

Length: 1287 bp
ATGAGCCAGACTGAAGTATCGGGAATGAAAGCTACTCTTGTTCCACTTGCGACTCTGATCGGTCGTGAGCTTAGGAGTGAGAAGGTTGAGAAACCTTATTTGAAGTATGGGCAGGCTGCTGTGGCAAAGAAAGGAGAGGATTGCTTTCTTATAAAAACAGACTGCCAGAGGACTCATTCGAATCCGTCAACATCATTCTCTGTCTTCGCGATATTTGACGGGCATAATGGTATATCAGCTGCTATTTTTGCAAAGGAGAATTTATTGGCTAATGTTTTGAGTGCCATTCCTCAAGGAATCAGTAGGGATGAATGGCTTCATGCCCTTCCTCGGGCGCTGGTTGCAGGTTTTGTGAAAACTGATATAGAATTTCAGCAGAAAGGGGAAACTTCTGGTACAACTGTGACATTTGTTGTGATTGACGGTTGGACTGTGACTGTCGCATCTGTTGGAGATTCTAGATGCATATTGGACACCCAGGGTGGCGTTGTTTCACTCTTGACTGTTGATCACAGGCTGGAAGAAAATGAAGAAGAGAGGGCACGTGTCACTGCCAGTGGTGGTGAAGTAGGGAGGCTCAATGTTTTCGGGGGCAGTGAGGTTGGTCCCCTCCGCTGCTGGCCTGGTGGATTATGCCTTTCTAGGTCAATTGGTGACACAGATGTGGGAGAATTCATTGTTCCAATACCCCATGTCAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGACTTATAATAGCTTCTGATGGCATCTGGGATGCTTTGTCTTCTGATTTGGCTGCCAAGTCTTGTCGGGGATTGCCTGCAGAGCTTGCTGCAAAGCTGGTTGTTAAGGAGGCTCTGAGGTCAAGGGGTCTCAAGGATGATACAACCTGCCTAGTTGTTGACATAATCCCTTCAGACCACCCTGTCTTGCCTCCAACGCCAATGAAGAAACAAAACATCCTTGCTTCGCTTATCTTTGGGAAGAAAACTCGGAATTCTGTGAACAAAAGAAATAAGCTTTCTTCTGTTGGAGTTGTGGAGGAGTTGTTTGAAGAAGGTTCAGCAATGCTCGCTGAAAGGTTGGGTAAGGATTCTACTCTGGATGCAAATTCTGGTCTTTTCCGATGTGCAGTCTGCCAAGTGGATCAGCCTCCAGTAGAAGGTTTATCAGTAAATTCTGGGCCTTTTTTCTCTCCAGCATCAAAGCCATGGGAAGGTCTCTTTCTTTGTGCCAAGTGTCGGAACAAGAAAGACGCCATGGAAGGAAGAAGACTGAGCACGCCCACAGTGATCTTGTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

429

Amino Acids

46.0

Weight (kDa)

7.51

Isoelectric Point (pI)

37.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 152, 734
AasI GACNNNNNNGTC 1 cut(s) 908
Acc36I ACCTGC 2 cut(s) 335, 881
AccII CGCG 1 cut(s) 209
AciI CCGC 1 cut(s) 613
AclWI GGATC 1 cut(s) 1137
AcsI RAATTY 6 cut(s) 259, 368, 671, 979, 1093, 1159
AcuI CTGAAG 2 cut(s) 33, 882
AcvI CACGTG 1 cut(s) 545
AcyI GRCGYC 1 cut(s) 1239
AfaI GTAC 1 cut(s) 397
AfiI CCNNNNNNNGG 5 cut(s) 330, 331, 1145, 1199, 1224
AflIII ACRYGT 1 cut(s) 544
AgsI TTSAA 3 cut(s) 103, 714, 1037
AjnI CCWGG 2 cut(s) 477, 622
AleI CACNNNNGTG 1 cut(s) 662
AluBI AGCT 8 cut(s) 32, 70, 239, 709, 740, 811, 823, 1003
AluI AGCT 8 cut(s) 32, 70, 239, 709, 740, 811, 823, 1003
Alw21I GWGCWC 1 cut(s) 1265
Alw26I GTCTC 2 cut(s) 860, 1208
AlwI GGATC 1 cut(s) 1137
Ama87I CYCGRG 1 cut(s) 330
AoxI GGCC 2 cut(s) 620, 1166
ApeKI GCWGC 5 cut(s) 116, 239, 615, 779, 815
ApoI RAATTY 6 cut(s) 259, 368, 671, 979, 1093, 1159
Asp700I GAANNNNTTC 1 cut(s) 315
AspLEI GCGC 1 cut(s) 337
AspS9I GGNCC 2 cut(s) 605, 1166
AsuHPI GGTGA 2 cut(s) 575, 665
AsuII TTCGAA 1 cut(s) 179
AvaI CYCGRG 1 cut(s) 330
AvaII GGWCC 1 cut(s) 605
BaeGI GKGCMC 1 cut(s) 544
BaeI ACNNNNGTAYC 3 cut(s) 33, 387, 420
BbrPI CACGTG 1 cut(s) 545
BbsI GAAGAC 4 cut(s) 196, 733, 759, 1261
Bbv12I GWGCWC 1 cut(s) 1265
BbvI GCAGC 5 cut(s) 103, 226, 602, 766, 802
BccI CCATC 1 cut(s) 740
BciT130I CCWGG 2 cut(s) 479, 624
BclI TGATCA 1 cut(s) 508
BcoDI GTCTC 2 cut(s) 860, 1208
BfaI CTAG 3 cut(s) 459, 642, 878
BfmI CTRYAG 1 cut(s) 804
BfoI RGCGCY 1 cut(s) 338
BfuAI ACCTGC 2 cut(s) 335, 881
BisI GCNGC 5 cut(s) 117, 240, 616, 780, 816
BlsI GCNGC 5 cut(s) 118, 241, 617, 781, 817
Bme1390I CCNGG 2 cut(s) 479, 624
Bme18I GGWCC 1 cut(s) 605
BmeT110I CYCGRG 1 cut(s) 330
BmgT120I GGNCC 2 cut(s) 605, 1166
BmiI GGNNCC 1 cut(s) 607
BmrFI CCNGG 2 cut(s) 479, 624
BmsI GCATC 6 cut(s) 452, 452, 748, 759, 1078, 1193
BpiI GAAGAC 4 cut(s) 196, 733, 759, 1261
BpmI CTGGAG 2 cut(s) 1122, 1164
Bpu10I CCTNAGC 1 cut(s) 71
Bpu14I TTCGAA 1 cut(s) 179
BpuEI CTTGAG 2 cut(s) 276, 842
BsaAI YACGTR 1 cut(s) 545
BsaHI GRCGYC 1 cut(s) 1239
BsaI GGTCTC 2 cut(s) 860, 1208
BsaJI CCNNGG 5 cut(s) 329, 477, 478, 1193, 1242
BsaXI ACNNNNNCTCC 2 cut(s) 1016, 1046
Bsc4I CCNNNNNNNGG 5 cut(s) 330, 331, 1145, 1199, 1224
Bse1I ACTGG 2 cut(s) 555, 1139
Bse3DI GCAATG 1 cut(s) 1056
BseBI CCWGG 2 cut(s) 479, 624
BseDI CCNNGG 5 cut(s) 329, 477, 478, 1193, 1242
BseGI GGATG 5 cut(s) 313, 763, 868, 942, 1093
BseLI CCNNNNNNNGG 5 cut(s) 330, 331, 1145, 1199, 1224
BseMI GCAATG 1 cut(s) 1056
BseMII CTCAG 2 cut(s) 833, 1250
BseNI ACTGG 2 cut(s) 555, 1139
BseRI GAGGAG 1 cut(s) 1040
BseSI GKGCMC 1 cut(s) 544
BseXI GCAGC 5 cut(s) 103, 226, 602, 766, 802
BsgI GTGCAG 1 cut(s) 1134
Bsh1236I CGCG 1 cut(s) 209
Bsh1285I CGRYCG 1 cut(s) 64
BshFI GGCC 2 cut(s) 622, 1168
BsiEI CGRYCG 1 cut(s) 64
BsiHKAI GWGCWC 1 cut(s) 1265
BsiHKCI CYCGRG 1 cut(s) 330
BslFI GGGAC 1 cut(s) 591
BslI CCNNNNNNNGG 5 cut(s) 330, 331, 1145, 1199, 1224
BsmAI GTCTC 2 cut(s) 860, 1208
BsmFI GGGAC 1 cut(s) 591
BsnI GGCC 2 cut(s) 622, 1168
Bso31I GGTCTC 2 cut(s) 860, 1208
BsoBI CYCGRG 1 cut(s) 330
Bsp119I TTCGAA 1 cut(s) 179
Bsp1286I GDGCHC 2 cut(s) 544, 1265
Bsp143I GATC 4 cut(s) 57, 508, 1129, 1275
Bsp19I CCATGG 2 cut(s) 1193, 1242
Bsp68I TCGCGA 1 cut(s) 209
BspACI CCGC 1 cut(s) 613
BspANI GGCC 2 cut(s) 622, 1168
BspCNI CTCAG 2 cut(s) 834, 1251
BspFNI CGCG 1 cut(s) 209
BspLI GGNNCC 1 cut(s) 607
BspMAI CTGCAG 1 cut(s) 808
BspMI ACCTGC 2 cut(s) 335, 881
BspPI GGATC 1 cut(s) 1137
BspT104I TTCGAA 1 cut(s) 179
BspTNI GGTCTC 2 cut(s) 860, 1208
BsrDI GCAATG 1 cut(s) 1056
BsrI ACTGG 2 cut(s) 555, 1139
BssECI CCNNGG 5 cut(s) 329, 477, 478, 1193, 1242
BssMI GATC 4 cut(s) 57, 508, 1129, 1275
BssNI GRCGYC 1 cut(s) 1239
BssT1I CCWWGG 2 cut(s) 1193, 1242
Bst2UI CCWGG 2 cut(s) 479, 624
Bst4CI ACNGT 6 cut(s) 403, 425, 433, 439, 505, 1273
Bst6I CTCTTC 1 cut(s) 528
BstACI GRCGYC 1 cut(s) 1239
BstAPI GCANNNNNTGC 1 cut(s) 812
BstBAI YACGTR 1 cut(s) 545
BstBI TTCGAA 1 cut(s) 179
BstC8I GCNNGC 6 cut(s) 114, 620, 804, 813, 1056, 1265
BstDEI CTNAG 3 cut(s) 71, 842, 1259
BstDSI CCRYGG 2 cut(s) 1193, 1242
BstF5I GGATG 5 cut(s) 313, 763, 868, 942, 1093
BstFNI CGCG 1 cut(s) 209
BstH2I RGCGCY 1 cut(s) 338
BstHHI GCGC 1 cut(s) 337
BstKTI GATC 4 cut(s) 60, 511, 1132, 1278
BstMAI GTCTC 2 cut(s) 860, 1208
BstMBI GATC 4 cut(s) 57, 508, 1129, 1275
BstMCI CGRYCG 1 cut(s) 64
BstMWI GCNNNNNNNGC 8 cut(s) 122, 248, 341, 706, 808, 812, 922, 1055
BstNI CCWGG 2 cut(s) 479, 624
BstSCI CCNGG 2 cut(s) 477, 622
BstSFI CTRYAG 1 cut(s) 804
BstSLI GKGCMC 1 cut(s) 544
BstUI CGCG 1 cut(s) 209
BstV1I GCAGC 5 cut(s) 103, 226, 602, 766, 802
BstV2I GAAGAC 4 cut(s) 196, 733, 759, 1261
BsuRI GGCC 2 cut(s) 622, 1168
BtgI CCRYGG 2 cut(s) 1193, 1242
BtsCI GGATG 5 cut(s) 313, 763, 868, 942, 1093
BtsI GCAGTG 2 cut(s) 549, 601
BtsIMutI CAGTG 4 cut(s) 549, 562, 601, 1278
BtuMI TCGCGA 1 cut(s) 209
BveI ACCTGC 2 cut(s) 335, 881
Cac8I GCNNGC 6 cut(s) 114, 620, 804, 813, 1056, 1265
CfoI GCGC 1 cut(s) 337
Cfr13I GGNCC 2 cut(s) 605, 1166
CseI GACGC 1 cut(s) 1247
Csp6I GTAC 1 cut(s) 396
CviAII CATG 4 cut(s) 320, 692, 1194, 1243
CviQI GTAC 1 cut(s) 396
DdeI CTNAG 3 cut(s) 71, 842, 1259
DpnI GATC 4 cut(s) 59, 510, 1131, 1277
DpnII GATC 4 cut(s) 57, 508, 1129, 1275
DrdI GACNNNNNNGTC 1 cut(s) 908
DseDI GACNNNNNNGTC 1 cut(s) 908
Eam1104I CTCTTC 1 cut(s) 528
EarI CTCTTC 1 cut(s) 528
Eco130I CCWWGG 2 cut(s) 1193, 1242
Eco31I GGTCTC 2 cut(s) 860, 1208
Eco47I GGWCC 1 cut(s) 605
Eco57I CTGAAG 2 cut(s) 33, 882
Eco72I CACGTG 1 cut(s) 545
Eco88I CYCGRG 1 cut(s) 330
EcoRI GAATTC 2 cut(s) 671, 979
EcoRII CCWGG 2 cut(s) 477, 622
EcoT14I CCWWGG 2 cut(s) 1193, 1242
EcoT22I ATGCAT 1 cut(s) 467
ErhI CCWWGG 2 cut(s) 1193, 1242
FaeI CATG 4 cut(s) 323, 695, 1197, 1246
FalI AAGNNNNNCTT 4 cut(s) 21, 53, 693, 725
FaqI GGGAC 1 cut(s) 591
FatI CATG 4 cut(s) 319, 691, 1193, 1242
FbaI TGATCA 1 cut(s) 508
Fnu4HI GCNGC 5 cut(s) 117, 240, 616, 780, 816
FokI GGATG 5 cut(s) 320, 770, 875, 929, 1100
Fsp4HI GCNGC 5 cut(s) 117, 240, 616, 780, 816
FspBI CTAG 3 cut(s) 459, 642, 878
GlaI GCGC 1 cut(s) 336
GluI GCNGC 5 cut(s) 117, 240, 616, 780, 816
GsuI CTGGAG 2 cut(s) 1122, 1164
HaeII RGCGCY 1 cut(s) 338
HaeIII GGCC 2 cut(s) 622, 1168
HgaI GACGC 1 cut(s) 1247
HhaI GCGC 1 cut(s) 337
Hin1I GRCGYC 1 cut(s) 1239
Hin1II CATG 4 cut(s) 323, 695, 1197, 1246
Hin6I GCGC 1 cut(s) 335
HinP1I GCGC 1 cut(s) 335
HincII GTYRAC 2 cut(s) 189, 886
HindII GTYRAC 2 cut(s) 189, 886
HindIII AAGCTT 2 cut(s) 707, 1001
HinfI GANTC 6 cut(s) 52, 172, 181, 297, 455, 1076
HphI GGTGA 2 cut(s) 575, 665
Hpy166II GTNNAC 3 cut(s) 189, 886, 988
Hpy188I TCNGA 8 cut(s) 57, 745, 772, 843, 901, 978, 1109, 1227
Hpy188III TCNNGA 6 cut(s) 21, 65, 208, 459, 499, 1085
Hpy8I GTNNAC 3 cut(s) 189, 886, 988
HpyAV CCTTC 7 cut(s) 76, 335, 906, 1034, 1139, 1193, 1241
HpyCH4III ACNGT 6 cut(s) 403, 425, 433, 439, 505, 1273
HpyCH4IV ACGT 1 cut(s) 544
HpyCH4V TGCA 7 cut(s) 251, 344, 465, 806, 818, 1091, 1115
HpyF10VI GCNNNNNNNGC 8 cut(s) 122, 248, 341, 706, 808, 812, 922, 1055
HpyF3I CTNAG 3 cut(s) 71, 842, 1259
HpySE526I ACGT 1 cut(s) 544
Hsp92I GRCGYC 1 cut(s) 1239
Hsp92II CATG 4 cut(s) 323, 695, 1197, 1246
HspAI GCGC 1 cut(s) 335
Ksp22I TGATCA 1 cut(s) 508
Kzo9I GATC 4 cut(s) 57, 508, 1129, 1275
Lsp1109I GCAGC 5 cut(s) 103, 226, 602, 766, 802
LweI GCATC 6 cut(s) 452, 452, 748, 759, 1078, 1193
MaeI CTAG 3 cut(s) 459, 642, 878
MaeII ACGT 1 cut(s) 544
MaeIII GTNAC 4 cut(s) 403, 433, 547, 653
MalI GATC 4 cut(s) 59, 510, 1131, 1277
MboI GATC 4 cut(s) 57, 508, 1129, 1275
MfeI CAATTG 1 cut(s) 648
MhlI GDGCHC 2 cut(s) 544, 1265
MluCI AATT 7 cut(s) 259, 368, 648, 671, 979, 1093, 1159
MlyI GAGTC 2 cut(s) 46, 166
MmeI TCCRAC 5 cut(s) 407, 430, 944, 994, 1205
Mph1103I ATGCAT 1 cut(s) 467
MroXI GAANNNNTTC 1 cut(s) 315
MseI TTAA 1 cut(s) 831
MslI CAYNNNNRTG 1 cut(s) 662
MspA1I CMGCKG 2 cut(s) 239, 615
MspR9I CCNGG 2 cut(s) 479, 624
MunI CAATTG 1 cut(s) 648
MvaI CCWGG 2 cut(s) 479, 624
MvnI CGCG 1 cut(s) 209
MwoI GCNNNNNNNGC 8 cut(s) 122, 248, 341, 706, 808, 812, 922, 1055
NcoI CCATGG 2 cut(s) 1193, 1242
NdeII GATC 4 cut(s) 57, 508, 1129, 1275
NlaIII CATG 4 cut(s) 323, 695, 1197, 1246
NlaIV GGNNCC 1 cut(s) 607
NmuCI GTSAC 4 cut(s) 403, 433, 547, 653
NruI TCGCGA 1 cut(s) 209
NsiI ATGCAT 1 cut(s) 467
NspV TTCGAA 1 cut(s) 179
OliI CACNNNNGTG 1 cut(s) 662
PasI CCCWGGG 1 cut(s) 478
PdmI GAANNNNTTC 1 cut(s) 315
PfeI GAWTC 4 cut(s) 181, 297, 455, 1076
PkrI GCNGC 5 cut(s) 118, 241, 617, 781, 817
PleI GAGTC 2 cut(s) 46, 166
PmaCI CACGTG 1 cut(s) 545
PmlI CACGTG 1 cut(s) 545
PpsI GAGTC 2 cut(s) 46, 166
Ppu21I YACGTR 1 cut(s) 545
PsiI TTATAA 2 cut(s) 152, 734
Psp6I CCWGG 2 cut(s) 477, 622
PspCI CACGTG 1 cut(s) 545
PspGI CCWGG 2 cut(s) 477, 622
PspN4I GGNNCC 1 cut(s) 607
PspPI GGNCC 2 cut(s) 605, 1166
PstI CTGCAG 1 cut(s) 808
PvuII CAGCTG 1 cut(s) 239
RruI TCGCGA 1 cut(s) 209
RsaI GTAC 1 cut(s) 397
RsaNI GTAC 1 cut(s) 396
RseI CAYNNNNRTG 1 cut(s) 662
SaqAI TTAA 1 cut(s) 831
SatI GCNGC 5 cut(s) 117, 240, 616, 780, 816
Sau3AI GATC 4 cut(s) 57, 508, 1129, 1275
Sau96I GGNCC 2 cut(s) 605, 1166
SchI GAGTC 2 cut(s) 46, 166
ScrFI CCNGG 2 cut(s) 479, 624
SduI GDGCHC 2 cut(s) 544, 1265
SfaNI GCATC 6 cut(s) 452, 452, 748, 759, 1078, 1193
SfcI CTRYAG 1 cut(s) 804
SfuI TTCGAA 1 cut(s) 179
SinI GGWCC 1 cut(s) 605
SmiMI CAYNNNNRTG 1 cut(s) 662
SmlI CTYRAG 2 cut(s) 291, 857
SmoI CTYRAG 2 cut(s) 291, 857
Sse9I AATT 7 cut(s) 259, 368, 648, 671, 979, 1093, 1159
SsiI CCGC 1 cut(s) 613
SspMI CTAG 3 cut(s) 459, 642, 878
StyD4I CCNGG 2 cut(s) 477, 622
StyI CCWWGG 2 cut(s) 1193, 1242
TaaI ACNGT 6 cut(s) 403, 425, 433, 439, 505, 1273
TaiI ACGT 1 cut(s) 547
TaqI TCGA 1 cut(s) 179
TaqII GACCGA 1 cut(s) 50
TasI AATT 7 cut(s) 259, 368, 648, 671, 979, 1093, 1159
TfiI GAWTC 4 cut(s) 181, 297, 455, 1076
Tru1I TTAA 1 cut(s) 831
Tru9I TTAA 1 cut(s) 831
TscAI CASTG 4 cut(s) 556, 562, 601, 1278
TseFI GTSAC 4 cut(s) 403, 433, 547, 653
TseI GCWGC 5 cut(s) 116, 239, 615, 779, 815
Tsp45I GTSAC 4 cut(s) 403, 433, 547, 653
TspDTI ATGAA 6 cut(s) 41, 308, 324, 543, 664, 944
TspGWI ACGGA 1 cut(s) 174
TspRI CASTG 4 cut(s) 556, 562, 601, 1278
VpaK11BI GGWCC 1 cut(s) 605
XapI RAATTY 6 cut(s) 259, 368, 671, 979, 1093, 1159
XbaI TCTAGA 1 cut(s) 458
XmnI GAANNNNTTC 1 cut(s) 315
XspI CTAG 3 cut(s) 459, 642, 878
Zsp2I ATGCAT 1 cut(s) 467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.