Prupe.6G350800_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
29905083 .. 29907255
2173 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G350800.1

Sequence Viewer

Length: 1320 bp
ATGGGGTGCTTTCCAAAATGTTTCACTAGTTGTAAGCGCCGAAAGCTCAAAAAATCAGTCACCGTGACTCCATTTAAACACCAACAAAGCTTTGAAGGTACTGAAAAAGTTGTTCAAATTCAACATGCTGAACCCACTAAGCTAGAAGACGTTTTGGAAGCCATTAAACTCACCAAAGAATCAAAAGAGGAGGAGAATGAAGAACAATCAAAGAATGATGCCAAAAAGAAAGTTACGTTTGATTTGAATACCAAGGTCCATCATGAAGAATCATCTACCACTACCAAGGAAGTCACCAATAGCTTGGTGGAAAGCTCCGATGAGAAACAGGAAATACAAAAAGAGCTGGGACCGATTCTGGGTTCCATTATATCAAGCGTAGCACCATCTCATCCGTTAAACAAAAGATACGAAAATTGCGAAAACAATGAGGATGAATATGAAGATGTGGTGGACTTAGATGGAAGTGATTTGGATGCAGCTGATGATTATGAACAAGGACATGTCGATGATGAGTTTGATAGTAAGCAGCAAATCTCAATTCAAGAAGAGTCTTCCGAATCATTGTTTTCGCTATCGATAGATTCCAGGAAACAAGTTTATGATGCTGAAATAGATGAGAAGGAGGTCAACAGTCCAATGCCAAAGCTCAGTGCCTCTAACCAGGAAGTTAATCTAATAGGATCAAACCAAAATGCTAGGGATCAATCAGTGCTGAAGCCCATTGAAAATCTTACTCAATGGAAGGAGGTCAAACAGAAAGCAACTTCCACAGCTTCAAAGCACCAAGAGAAGGAGAACATAAATACAGAGCAAGATTGCTATGTACCCTTTAGCCCAGAGCCTACTTTAAAGCTGTCAAAACACTGCCCCAGGCCAAAGTCCGATGACCAGGGAACTGGGGTTGACACTAGCCTTTCAAGCTGGTTGGTTGAATCTGAGACCACGCCCAAGTCCAATGCCAGTAACAATTCTGTGGGGAACAACTCACTCTGTGAGAGAGTGATAAACTCACCCGGAAGCCGCGAAGATAGGCCAATTTTAGGAGCTTGGACAACTGAAGAGATAAAACAGTTGTCTGCTTTTTCTACCCCGAGACGGTCGCGAAGCCCAAGTCCGGACCAGATACCGATCATAGGCACTGTTGGGAGCTACTGGTGTCATACTGGTCAGACCATGGATTCGGACTCAAGCTCTTCTTGCAGCGGAATGCCAAGAACAGCAGGGAGAAACAGAGAGGATCCGAAAGTGAAATGGAAGTCTACTGCATTTGAGGCAAAATTGGAGAGAGCTTTAGACATGGGTCTACTTGAAGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

440

Amino Acids

49.04

Weight (kDa)

4.99

Isoelectric Point (pI)

53.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 1262, 1306
AccII CGCG 2 cut(s) 1026, 1105
AccIII TCCGGA 1 cut(s) 1117
AciI CCGC 2 cut(s) 1024, 1206
AclWI GGATC 4 cut(s) 691, 711, 1235, 1248
AcsI RAATTY 1 cut(s) 117
AcuI CTGAAG 2 cut(s) 737, 1080
AdeI CACNNNGTG 1 cut(s) 995
AfaI GTAC 2 cut(s) 100, 828
AfiI CCNNNNNNNGG 6 cut(s) 359, 793, 1043, 1098, 1117, 1136
AflIII ACRYGT 1 cut(s) 502
AhlI ACTAGT 1 cut(s) 26
AjnI CCWGG 4 cut(s) 587, 663, 872, 891
Alw26I GTCTC 2 cut(s) 935, 1090
AlwI GGATC 4 cut(s) 691, 711, 1235, 1248
Ama87I CYCGRG 1 cut(s) 1093
Aor13HI TCCGGA 1 cut(s) 1117
AoxI GGCC 2 cut(s) 875, 1034
ApeKI GCWGC 3 cut(s) 479, 529, 1203
ApoI RAATTY 1 cut(s) 117
ArsI GACNNNNNNTTYG 6 cut(s) 42, 74, 1099, 1131, 1165, 1197
AspLEI GCGC 1 cut(s) 39
AspS9I GGNCC 3 cut(s) 256, 350, 1120
AsuC2I CCSGG 1 cut(s) 1017
AsuHPI GGTGA 4 cut(s) 52, 163, 286, 1005
AvaI CYCGRG 1 cut(s) 1093
AvaII GGWCC 3 cut(s) 256, 350, 1120
BamHI GGATCC 1 cut(s) 1240
BbsI GAAGAC 2 cut(s) 153, 546
BbvI GCAGC 3 cut(s) 491, 541, 1215
BccI CCATC 3 cut(s) 267, 394, 455
BciT130I CCWGG 4 cut(s) 589, 665, 874, 893
BcnI CCSGG 1 cut(s) 1017
BcoDI GTCTC 2 cut(s) 935, 1090
BcuI ACTAGT 1 cut(s) 26
BfaI CTAG 4 cut(s) 27, 143, 699, 912
BfoI RGCGCY 1 cut(s) 40
BisI GCNGC 4 cut(s) 480, 530, 1024, 1204
BlsI GCNGC 4 cut(s) 481, 531, 1025, 1205
Bme1390I CCNGG 5 cut(s) 589, 665, 874, 893, 1017
Bme18I GGWCC 3 cut(s) 256, 350, 1120
BmeT110I CYCGRG 1 cut(s) 1093
BmgT120I GGNCC 3 cut(s) 256, 350, 1120
BmiI GGNNCC 3 cut(s) 351, 364, 1242
BmrFI CCNGG 5 cut(s) 589, 665, 874, 893, 1017
BmrI ACTGGG 1 cut(s) 909
BmsI GCATC 3 cut(s) 208, 466, 595
BmuI ACTGGG 1 cut(s) 909
BoxI GACNNNNGTC 1 cut(s) 1302
BpiI GAAGAC 2 cut(s) 153, 546
BpuEI CTTGAG 1 cut(s) 1174
BpuMI CCSGG 1 cut(s) 1017
Bsa29I ATCGAT 1 cut(s) 578
BsaBI GATNNNNATC 1 cut(s) 1130
BsaI GGTCTC 1 cut(s) 935
BsaJI CCNNGG 5 cut(s) 252, 285, 872, 892, 1176
BsaWI WCCGGW 1 cut(s) 1117
BsaXI ACNNNNNCTCC 2 cut(s) 52, 82
Bsc4I CCNNNNNNNGG 6 cut(s) 359, 793, 1043, 1098, 1117, 1136
Bse1I ACTGG 4 cut(s) 904, 963, 1160, 1171
Bse8I GATNNNNATC 1 cut(s) 1130
BseAI TCCGGA 1 cut(s) 1117
BseBI CCWGG 4 cut(s) 589, 665, 874, 893
BseCI ATCGAT 1 cut(s) 578
BseDI CCNNGG 5 cut(s) 252, 285, 872, 892, 1176
BseGI GGATG 3 cut(s) 391, 439, 481
BseJI GATNNNNATC 1 cut(s) 1130
BseLI CCNNNNNNNGG 6 cut(s) 359, 793, 1043, 1098, 1117, 1136
BseMII CTCAG 2 cut(s) 664, 930
BseNI ACTGG 4 cut(s) 904, 963, 1160, 1171
BseRI GAGGAG 2 cut(s) 203, 206
BseXI GCAGC 3 cut(s) 491, 541, 1215
BseYI CCCAGC 1 cut(s) 346
Bsh1236I CGCG 2 cut(s) 1026, 1105
Bsh1285I CGRYCG 1 cut(s) 1103
BshFI GGCC 2 cut(s) 877, 1036
BshVI ATCGAT 1 cut(s) 578
BsiEI CGRYCG 1 cut(s) 1103
BsiHKCI CYCGRG 1 cut(s) 1093
BsiSI CCGG 2 cut(s) 1017, 1118
BslFI GGGAC 1 cut(s) 363
BslI CCNNNNNNNGG 6 cut(s) 359, 793, 1043, 1098, 1117, 1136
BsmAI GTCTC 2 cut(s) 935, 1090
BsmBI CGTCTC 1 cut(s) 1090
BsmFI GGGAC 1 cut(s) 363
BsmI GAATGC 1 cut(s) 1215
BsnI GGCC 2 cut(s) 877, 1036
Bso31I GGTCTC 1 cut(s) 935
BsoBI CYCGRG 1 cut(s) 1093
Bsp13I TCCGGA 1 cut(s) 1117
Bsp143I GATC 4 cut(s) 683, 703, 1131, 1240
Bsp19I CCATGG 1 cut(s) 1176
Bsp68I TCGCGA 1 cut(s) 1105
BspACI CCGC 2 cut(s) 1024, 1206
BspANI GGCC 2 cut(s) 877, 1036
BspCNI CTCAG 2 cut(s) 663, 931
BspDI ATCGAT 1 cut(s) 578
BspEI TCCGGA 1 cut(s) 1117
BspFNI CGCG 2 cut(s) 1026, 1105
BspHI TCATGA 1 cut(s) 262
BspLI GGNNCC 3 cut(s) 351, 364, 1242
BspPI GGATC 4 cut(s) 691, 711, 1235, 1248
BspQI GCTCTTC 1 cut(s) 1201
BspTNI GGTCTC 1 cut(s) 935
BsrI ACTGG 4 cut(s) 904, 963, 1160, 1171
BssECI CCNNGG 5 cut(s) 252, 285, 872, 892, 1176
BssMI GATC 4 cut(s) 683, 703, 1131, 1240
BssT1I CCWWGG 3 cut(s) 252, 285, 1176
Bst2UI CCWGG 4 cut(s) 589, 665, 874, 893
Bst4CI ACNGT 5 cut(s) 64, 635, 1074, 1101, 1144
Bst6I CTCTTC 3 cut(s) 543, 1056, 1201
BstDEI CTNAG 5 cut(s) 138, 457, 650, 939, 1317
BstDSI CCRYGG 1 cut(s) 1176
BstF5I GGATG 3 cut(s) 391, 439, 481
BstFNI CGCG 2 cut(s) 1026, 1105
BstH2I RGCGCY 1 cut(s) 40
BstHHI GCGC 1 cut(s) 39
BstKTI GATC 4 cut(s) 686, 706, 1134, 1243
BstMAI GTCTC 2 cut(s) 935, 1090
BstMBI GATC 4 cut(s) 683, 703, 1131, 1240
BstMCI CGRYCG 1 cut(s) 1103
BstMWI GCNNNNNNNGC 4 cut(s) 43, 921, 1200, 1274
BstNI CCWGG 4 cut(s) 589, 665, 874, 893
BstNSI RCATGY 2 cut(s) 128, 506
BstPAI GACNNNNGTC 1 cut(s) 1302
BstSCI CCNGG 5 cut(s) 587, 663, 872, 891, 1015
BstUI CGCG 2 cut(s) 1026, 1105
BstV1I GCAGC 3 cut(s) 491, 541, 1215
BstV2I GAAGAC 2 cut(s) 153, 546
BstX2I RGATCY 1 cut(s) 1240
BstXI CCANNNNNNTGG 2 cut(s) 304, 899
BstYI RGATCY 1 cut(s) 1240
Bsu15I ATCGAT 1 cut(s) 578
BsuRI GGCC 2 cut(s) 877, 1036
BsuTUI ATCGAT 1 cut(s) 578
BtgI CCRYGG 1 cut(s) 1176
BtsCI GGATG 3 cut(s) 391, 439, 481
BtsI GCAGTG 1 cut(s) 865
BtsIMutI CAGTG 4 cut(s) 658, 717, 865, 1140
BtuMI TCGCGA 1 cut(s) 1105
CciI TCATGA 1 cut(s) 262
CfoI GCGC 1 cut(s) 39
Cfr13I GGNCC 3 cut(s) 256, 350, 1120
ClaI ATCGAT 1 cut(s) 578
Csp6I GTAC 2 cut(s) 99, 827
CviAII CATG 5 cut(s) 125, 263, 503, 1177, 1300
CviQI GTAC 2 cut(s) 99, 827
DdeI CTNAG 5 cut(s) 138, 457, 650, 939, 1317
DpnI GATC 4 cut(s) 685, 705, 1133, 1242
DpnII GATC 4 cut(s) 683, 703, 1131, 1240
DraI TTTAAA 2 cut(s) 76, 852
DraIII CACNNNGTG 1 cut(s) 995
Eam1104I CTCTTC 3 cut(s) 543, 1056, 1201
EarI CTCTTC 3 cut(s) 543, 1056, 1201
Eco130I CCWWGG 3 cut(s) 252, 285, 1176
Eco31I GGTCTC 1 cut(s) 935
Eco47I GGWCC 3 cut(s) 256, 350, 1120
Eco57I CTGAAG 2 cut(s) 737, 1080
Eco88I CYCGRG 1 cut(s) 1093
EcoRII CCWGG 4 cut(s) 587, 663, 872, 891
EcoT14I CCWWGG 3 cut(s) 252, 285, 1176
ErhI CCWWGG 3 cut(s) 252, 285, 1176
Esp3I CGTCTC 1 cut(s) 1090
FaeI CATG 5 cut(s) 128, 266, 506, 1180, 1303
FalI AAGNNNNNCTT 2 cut(s) 1183, 1215
FaqI GGGAC 1 cut(s) 363
FatI CATG 5 cut(s) 124, 262, 502, 1176, 1299
FblI GTMKAC 2 cut(s) 1262, 1306
Fnu4HI GCNGC 4 cut(s) 480, 530, 1024, 1204
FokI GGATG 3 cut(s) 378, 446, 488
Fsp4HI GCNGC 4 cut(s) 480, 530, 1024, 1204
FspBI CTAG 4 cut(s) 27, 143, 699, 912
GlaI GCGC 1 cut(s) 38
GluI GCNGC 4 cut(s) 480, 530, 1024, 1204
GsaI CCCAGC 1 cut(s) 350
HaeII RGCGCY 1 cut(s) 40
HaeIII GGCC 2 cut(s) 877, 1036
HapII CCGG 2 cut(s) 1017, 1118
HhaI GCGC 1 cut(s) 39
Hin1II CATG 5 cut(s) 128, 266, 506, 1180, 1303
Hin6I GCGC 1 cut(s) 37
HinP1I GCGC 1 cut(s) 37
HincII GTYRAC 2 cut(s) 631, 907
HindII GTYRAC 2 cut(s) 631, 907
HindIII AAGCTT 2 cut(s) 88, 1314
HpaII CCGG 2 cut(s) 1017, 1118
HphI GGTGA 4 cut(s) 52, 163, 286, 1005
Hpy166II GTNNAC 5 cut(s) 454, 631, 907, 1263, 1307
Hpy188I TCNGA 7 cut(s) 319, 559, 886, 940, 1173, 1186, 1245
Hpy188III TCNNGA 4 cut(s) 263, 545, 1104, 1118
Hpy8I GTNNAC 5 cut(s) 454, 631, 907, 1263, 1307
HpyAV CCTTC 4 cut(s) 89, 616, 739, 787
HpyCH4III ACNGT 5 cut(s) 64, 635, 1074, 1101, 1144
HpyCH4IV ACGT 2 cut(s) 150, 236
HpyCH4V TGCA 3 cut(s) 479, 1203, 1268
HpyF10VI GCNNNNNNNGC 4 cut(s) 43, 921, 1200, 1274
HpyF3I CTNAG 5 cut(s) 138, 457, 650, 939, 1317
HpySE526I ACGT 2 cut(s) 150, 236
Hsp92II CATG 5 cut(s) 128, 266, 506, 1180, 1303
HspAI GCGC 1 cut(s) 37
Kpn2I TCCGGA 1 cut(s) 1117
Kzo9I GATC 4 cut(s) 683, 703, 1131, 1240
LguI GCTCTTC 1 cut(s) 1201
LmnI GCTCC 3 cut(s) 320, 1046, 1149
Lsp1109I GCAGC 3 cut(s) 491, 541, 1215
LweI GCATC 3 cut(s) 208, 466, 595
MaeI CTAG 4 cut(s) 27, 143, 699, 912
MaeII ACGT 2 cut(s) 150, 236
MaeIII GTNAC 5 cut(s) 58, 64, 232, 292, 965
MalI GATC 4 cut(s) 685, 705, 1133, 1242
MboI GATC 4 cut(s) 683, 703, 1131, 1240
MboII GAAGA 9 cut(s) 158, 212, 278, 455, 546, 560, 1040, 1073, 1188
MflI RGATCY 1 cut(s) 1240
MluCI AATT 6 cut(s) 117, 415, 540, 970, 1038, 1280
MlyI GAGTC 3 cut(s) 61, 560, 1181
MnlI CCTC 8 cut(s) 181, 184, 424, 619, 667, 742, 1231, 1267
MroI TCCGGA 1 cut(s) 1117
MseI TTAA 5 cut(s) 75, 165, 398, 672, 851
MslI CAYNNNNRTG 1 cut(s) 507
MspA1I CMGCKG 2 cut(s) 482, 1206
MspI CCGG 2 cut(s) 1017, 1118
MspR9I CCNGG 5 cut(s) 589, 665, 874, 893, 1017
Mva1269I GAATGC 1 cut(s) 1215
MvaI CCWGG 4 cut(s) 589, 665, 874, 893
MvnI CGCG 2 cut(s) 1026, 1105
MwoI GCNNNNNNNGC 4 cut(s) 43, 921, 1200, 1274
NciI CCSGG 1 cut(s) 1017
NcoI CCATGG 1 cut(s) 1176
NdeII GATC 4 cut(s) 683, 703, 1131, 1240
NlaIII CATG 5 cut(s) 128, 266, 506, 1180, 1303
NlaIV GGNNCC 3 cut(s) 351, 364, 1242
NmuCI GTSAC 3 cut(s) 58, 64, 292
NruI TCGCGA 1 cut(s) 1105
NspI RCATGY 2 cut(s) 128, 506
PagI TCATGA 1 cut(s) 262
PciI ACATGT 1 cut(s) 502
PciSI GCTCTTC 1 cut(s) 1201
PcsI WCGNNNNNNNCGW 1 cut(s) 417
PctI GAATGC 1 cut(s) 1215
PfeI GAWTC 7 cut(s) 179, 269, 355, 560, 584, 935, 1181
PfoI TCCNGGA 1 cut(s) 587
PkrI GCNGC 4 cut(s) 481, 531, 1025, 1205
PleI GAGTC 3 cut(s) 61, 559, 1181
PpsI GAGTC 3 cut(s) 61, 559, 1181
PscI ACATGT 1 cut(s) 502
PshAI GACNNNNGTC 1 cut(s) 1302
Psp6I CCWGG 4 cut(s) 587, 663, 872, 891
PspFI CCCAGC 1 cut(s) 346
PspGI CCWGG 4 cut(s) 587, 663, 872, 891
PspN4I GGNNCC 3 cut(s) 351, 364, 1242
PspPI GGNCC 3 cut(s) 256, 350, 1120
PsuI RGATCY 1 cut(s) 1240
PvuII CAGCTG 1 cut(s) 482
RruI TCGCGA 1 cut(s) 1105
RsaI GTAC 2 cut(s) 100, 828
RsaNI GTAC 2 cut(s) 99, 827
RseI CAYNNNNRTG 1 cut(s) 507
SapI GCTCTTC 1 cut(s) 1201
SaqAI TTAA 5 cut(s) 75, 165, 398, 672, 851
SatI GCNGC 4 cut(s) 480, 530, 1024, 1204
Sau3AI GATC 4 cut(s) 683, 703, 1131, 1240
Sau96I GGNCC 3 cut(s) 256, 350, 1120
SchI GAGTC 3 cut(s) 61, 560, 1181
ScrFI CCNGG 5 cut(s) 589, 665, 874, 893, 1017
SfaNI GCATC 3 cut(s) 208, 466, 595
SinI GGWCC 3 cut(s) 256, 350, 1120
SmiMI CAYNNNNRTG 1 cut(s) 507
SmlI CTYRAG 1 cut(s) 1189
SmoI CTYRAG 1 cut(s) 1189
SpeI ACTAGT 1 cut(s) 26
Sse9I AATT 6 cut(s) 117, 415, 540, 970, 1038, 1280
SsiI CCGC 2 cut(s) 1024, 1206
SspMI CTAG 4 cut(s) 27, 143, 699, 912
StyD4I CCNGG 5 cut(s) 587, 663, 872, 891, 1015
StyI CCWWGG 3 cut(s) 252, 285, 1176
TaaI ACNGT 5 cut(s) 64, 635, 1074, 1101, 1144
TaiI ACGT 2 cut(s) 153, 239
TaqI TCGA 2 cut(s) 507, 578
TaqII GACCGA 1 cut(s) 367
TasI AATT 6 cut(s) 117, 415, 540, 970, 1038, 1280
TauI GCSGC 1 cut(s) 1026
TfiI GAWTC 7 cut(s) 179, 269, 355, 560, 584, 935, 1181
Tru1I TTAA 5 cut(s) 75, 165, 398, 672, 851
Tru9I TTAA 5 cut(s) 75, 165, 398, 672, 851
TscAI CASTG 4 cut(s) 658, 717, 872, 1147
TseFI GTSAC 3 cut(s) 58, 64, 292
TseI GCWGC 3 cut(s) 479, 529, 1203
Tsp45I GTSAC 3 cut(s) 58, 64, 292
TspDTI ATGAA 5 cut(s) 213, 279, 450, 456, 507
TspGWI ACGGA 1 cut(s) 384
TspRI CASTG 4 cut(s) 658, 717, 872, 1147
VpaK11BI GGWCC 3 cut(s) 256, 350, 1120
XapI RAATTY 1 cut(s) 117
XceI RCATGY 2 cut(s) 128, 506
XcmI CCANNNNNNNNNTGG 1 cut(s) 304
XmiI GTMKAC 2 cut(s) 1262, 1306
XspI CTAG 4 cut(s) 27, 143, 699, 912
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.