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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g01750 |
| malus_domestica | MD04G1231100.v1.1 MD12G1249400.v1.1 |
| prunus_persica | Prupe.6G350800_v2.0.a1 Prupe.6G350800_v2.0.a1 |
| pyrus_communis | pycom04g20470 pycom12g22920 |
| rosa_chinensis | RchiOBHm_Chr3g0449491 |
| rosa_laevigata | RLG00000025822 RLG00000025825 |
| rosa_multiflora | Rmu_sc0000430.1_g000018 Rmu_sc0019012.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00427450 |
| rosa_rugosa | Rorug02G0621600 Rorug02G0621700 |
| rosa_samantha | Rh3AG019800 Rh3BG019800 Rh3CG018500 Rh3DG019800 |
| rosa_wichuraiana | Rw3G001540 Rw3G001570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 1262, 1306 |
| AccII | CGCG | 2 cut(s) | 1026, 1105 |
| AccIII | TCCGGA | 1 cut(s) | 1117 |
| AciI | CCGC | 2 cut(s) | 1024, 1206 |
| AclWI | GGATC | 4 cut(s) | 691, 711, 1235, 1248 |
| AcsI | RAATTY | 1 cut(s) | 117 |
| AcuI | CTGAAG | 2 cut(s) | 737, 1080 |
| AdeI | CACNNNGTG | 1 cut(s) | 995 |
| AfaI | GTAC | 2 cut(s) | 100, 828 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 359, 793, 1043, 1098, 1117, 1136 |
| AflIII | ACRYGT | 1 cut(s) | 502 |
| AhlI | ACTAGT | 1 cut(s) | 26 |
| AjnI | CCWGG | 4 cut(s) | 587, 663, 872, 891 |
| Alw26I | GTCTC | 2 cut(s) | 935, 1090 |
| AlwI | GGATC | 4 cut(s) | 691, 711, 1235, 1248 |
| Ama87I | CYCGRG | 1 cut(s) | 1093 |
| Aor13HI | TCCGGA | 1 cut(s) | 1117 |
| AoxI | GGCC | 2 cut(s) | 875, 1034 |
| ApeKI | GCWGC | 3 cut(s) | 479, 529, 1203 |
| ApoI | RAATTY | 1 cut(s) | 117 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 42, 74, 1099, 1131, 1165, 1197 |
| AspLEI | GCGC | 1 cut(s) | 39 |
| AspS9I | GGNCC | 3 cut(s) | 256, 350, 1120 |
| AsuC2I | CCSGG | 1 cut(s) | 1017 |
| AsuHPI | GGTGA | 4 cut(s) | 52, 163, 286, 1005 |
| AvaI | CYCGRG | 1 cut(s) | 1093 |
| AvaII | GGWCC | 3 cut(s) | 256, 350, 1120 |
| BamHI | GGATCC | 1 cut(s) | 1240 |
| BbsI | GAAGAC | 2 cut(s) | 153, 546 |
| BbvI | GCAGC | 3 cut(s) | 491, 541, 1215 |
| BccI | CCATC | 3 cut(s) | 267, 394, 455 |
| BciT130I | CCWGG | 4 cut(s) | 589, 665, 874, 893 |
| BcnI | CCSGG | 1 cut(s) | 1017 |
| BcoDI | GTCTC | 2 cut(s) | 935, 1090 |
| BcuI | ACTAGT | 1 cut(s) | 26 |
| BfaI | CTAG | 4 cut(s) | 27, 143, 699, 912 |
| BfoI | RGCGCY | 1 cut(s) | 40 |
| BisI | GCNGC | 4 cut(s) | 480, 530, 1024, 1204 |
| BlsI | GCNGC | 4 cut(s) | 481, 531, 1025, 1205 |
| Bme1390I | CCNGG | 5 cut(s) | 589, 665, 874, 893, 1017 |
| Bme18I | GGWCC | 3 cut(s) | 256, 350, 1120 |
| BmeT110I | CYCGRG | 1 cut(s) | 1093 |
| BmgT120I | GGNCC | 3 cut(s) | 256, 350, 1120 |
| BmiI | GGNNCC | 3 cut(s) | 351, 364, 1242 |
| BmrFI | CCNGG | 5 cut(s) | 589, 665, 874, 893, 1017 |
| BmrI | ACTGGG | 1 cut(s) | 909 |
| BmsI | GCATC | 3 cut(s) | 208, 466, 595 |
| BmuI | ACTGGG | 1 cut(s) | 909 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1302 |
| BpiI | GAAGAC | 2 cut(s) | 153, 546 |
| BpuEI | CTTGAG | 1 cut(s) | 1174 |
| BpuMI | CCSGG | 1 cut(s) | 1017 |
| Bsa29I | ATCGAT | 1 cut(s) | 578 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1130 |
| BsaI | GGTCTC | 1 cut(s) | 935 |
| BsaJI | CCNNGG | 5 cut(s) | 252, 285, 872, 892, 1176 |
| BsaWI | WCCGGW | 1 cut(s) | 1117 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 52, 82 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 359, 793, 1043, 1098, 1117, 1136 |
| Bse1I | ACTGG | 4 cut(s) | 904, 963, 1160, 1171 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1130 |
| BseAI | TCCGGA | 1 cut(s) | 1117 |
| BseBI | CCWGG | 4 cut(s) | 589, 665, 874, 893 |
| BseCI | ATCGAT | 1 cut(s) | 578 |
| BseDI | CCNNGG | 5 cut(s) | 252, 285, 872, 892, 1176 |
| BseGI | GGATG | 3 cut(s) | 391, 439, 481 |
| BseJI | GATNNNNATC | 1 cut(s) | 1130 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 359, 793, 1043, 1098, 1117, 1136 |
| BseMII | CTCAG | 2 cut(s) | 664, 930 |
| BseNI | ACTGG | 4 cut(s) | 904, 963, 1160, 1171 |
| BseRI | GAGGAG | 2 cut(s) | 203, 206 |
| BseXI | GCAGC | 3 cut(s) | 491, 541, 1215 |
| BseYI | CCCAGC | 1 cut(s) | 346 |
| Bsh1236I | CGCG | 2 cut(s) | 1026, 1105 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1103 |
| BshFI | GGCC | 2 cut(s) | 877, 1036 |
| BshVI | ATCGAT | 1 cut(s) | 578 |
| BsiEI | CGRYCG | 1 cut(s) | 1103 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1093 |
| BsiSI | CCGG | 2 cut(s) | 1017, 1118 |
| BslFI | GGGAC | 1 cut(s) | 363 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 359, 793, 1043, 1098, 1117, 1136 |
| BsmAI | GTCTC | 2 cut(s) | 935, 1090 |
| BsmBI | CGTCTC | 1 cut(s) | 1090 |
| BsmFI | GGGAC | 1 cut(s) | 363 |
| BsmI | GAATGC | 1 cut(s) | 1215 |
| BsnI | GGCC | 2 cut(s) | 877, 1036 |
| Bso31I | GGTCTC | 1 cut(s) | 935 |
| BsoBI | CYCGRG | 1 cut(s) | 1093 |
| Bsp13I | TCCGGA | 1 cut(s) | 1117 |
| Bsp143I | GATC | 4 cut(s) | 683, 703, 1131, 1240 |
| Bsp19I | CCATGG | 1 cut(s) | 1176 |
| Bsp68I | TCGCGA | 1 cut(s) | 1105 |
| BspACI | CCGC | 2 cut(s) | 1024, 1206 |
| BspANI | GGCC | 2 cut(s) | 877, 1036 |
| BspCNI | CTCAG | 2 cut(s) | 663, 931 |
| BspDI | ATCGAT | 1 cut(s) | 578 |
| BspEI | TCCGGA | 1 cut(s) | 1117 |
| BspFNI | CGCG | 2 cut(s) | 1026, 1105 |
| BspHI | TCATGA | 1 cut(s) | 262 |
| BspLI | GGNNCC | 3 cut(s) | 351, 364, 1242 |
| BspPI | GGATC | 4 cut(s) | 691, 711, 1235, 1248 |
| BspQI | GCTCTTC | 1 cut(s) | 1201 |
| BspTNI | GGTCTC | 1 cut(s) | 935 |
| BsrI | ACTGG | 4 cut(s) | 904, 963, 1160, 1171 |
| BssECI | CCNNGG | 5 cut(s) | 252, 285, 872, 892, 1176 |
| BssMI | GATC | 4 cut(s) | 683, 703, 1131, 1240 |
| BssT1I | CCWWGG | 3 cut(s) | 252, 285, 1176 |
| Bst2UI | CCWGG | 4 cut(s) | 589, 665, 874, 893 |
| Bst4CI | ACNGT | 5 cut(s) | 64, 635, 1074, 1101, 1144 |
| Bst6I | CTCTTC | 3 cut(s) | 543, 1056, 1201 |
| BstDEI | CTNAG | 5 cut(s) | 138, 457, 650, 939, 1317 |
| BstDSI | CCRYGG | 1 cut(s) | 1176 |
| BstF5I | GGATG | 3 cut(s) | 391, 439, 481 |
| BstFNI | CGCG | 2 cut(s) | 1026, 1105 |
| BstH2I | RGCGCY | 1 cut(s) | 40 |
| BstHHI | GCGC | 1 cut(s) | 39 |
| BstKTI | GATC | 4 cut(s) | 686, 706, 1134, 1243 |
| BstMAI | GTCTC | 2 cut(s) | 935, 1090 |
| BstMBI | GATC | 4 cut(s) | 683, 703, 1131, 1240 |
| BstMCI | CGRYCG | 1 cut(s) | 1103 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 43, 921, 1200, 1274 |
| BstNI | CCWGG | 4 cut(s) | 589, 665, 874, 893 |
| BstNSI | RCATGY | 2 cut(s) | 128, 506 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1302 |
| BstSCI | CCNGG | 5 cut(s) | 587, 663, 872, 891, 1015 |
| BstUI | CGCG | 2 cut(s) | 1026, 1105 |
| BstV1I | GCAGC | 3 cut(s) | 491, 541, 1215 |
| BstV2I | GAAGAC | 2 cut(s) | 153, 546 |
| BstX2I | RGATCY | 1 cut(s) | 1240 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 304, 899 |
| BstYI | RGATCY | 1 cut(s) | 1240 |
| Bsu15I | ATCGAT | 1 cut(s) | 578 |
| BsuRI | GGCC | 2 cut(s) | 877, 1036 |
| BsuTUI | ATCGAT | 1 cut(s) | 578 |
| BtgI | CCRYGG | 1 cut(s) | 1176 |
| BtsCI | GGATG | 3 cut(s) | 391, 439, 481 |
| BtsI | GCAGTG | 1 cut(s) | 865 |
| BtsIMutI | CAGTG | 4 cut(s) | 658, 717, 865, 1140 |
| BtuMI | TCGCGA | 1 cut(s) | 1105 |
| CciI | TCATGA | 1 cut(s) | 262 |
| CfoI | GCGC | 1 cut(s) | 39 |
| Cfr13I | GGNCC | 3 cut(s) | 256, 350, 1120 |
| ClaI | ATCGAT | 1 cut(s) | 578 |
| Csp6I | GTAC | 2 cut(s) | 99, 827 |
| CviAII | CATG | 5 cut(s) | 125, 263, 503, 1177, 1300 |
| CviQI | GTAC | 2 cut(s) | 99, 827 |
| DdeI | CTNAG | 5 cut(s) | 138, 457, 650, 939, 1317 |
| DpnI | GATC | 4 cut(s) | 685, 705, 1133, 1242 |
| DpnII | GATC | 4 cut(s) | 683, 703, 1131, 1240 |
| DraI | TTTAAA | 2 cut(s) | 76, 852 |
| DraIII | CACNNNGTG | 1 cut(s) | 995 |
| Eam1104I | CTCTTC | 3 cut(s) | 543, 1056, 1201 |
| EarI | CTCTTC | 3 cut(s) | 543, 1056, 1201 |
| Eco130I | CCWWGG | 3 cut(s) | 252, 285, 1176 |
| Eco31I | GGTCTC | 1 cut(s) | 935 |
| Eco47I | GGWCC | 3 cut(s) | 256, 350, 1120 |
| Eco57I | CTGAAG | 2 cut(s) | 737, 1080 |
| Eco88I | CYCGRG | 1 cut(s) | 1093 |
| EcoRII | CCWGG | 4 cut(s) | 587, 663, 872, 891 |
| EcoT14I | CCWWGG | 3 cut(s) | 252, 285, 1176 |
| ErhI | CCWWGG | 3 cut(s) | 252, 285, 1176 |
| Esp3I | CGTCTC | 1 cut(s) | 1090 |
| FaeI | CATG | 5 cut(s) | 128, 266, 506, 1180, 1303 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1183, 1215 |
| FaqI | GGGAC | 1 cut(s) | 363 |
| FatI | CATG | 5 cut(s) | 124, 262, 502, 1176, 1299 |
| FblI | GTMKAC | 2 cut(s) | 1262, 1306 |
| Fnu4HI | GCNGC | 4 cut(s) | 480, 530, 1024, 1204 |
| FokI | GGATG | 3 cut(s) | 378, 446, 488 |
| Fsp4HI | GCNGC | 4 cut(s) | 480, 530, 1024, 1204 |
| FspBI | CTAG | 4 cut(s) | 27, 143, 699, 912 |
| GlaI | GCGC | 1 cut(s) | 38 |
| GluI | GCNGC | 4 cut(s) | 480, 530, 1024, 1204 |
| GsaI | CCCAGC | 1 cut(s) | 350 |
| HaeII | RGCGCY | 1 cut(s) | 40 |
| HaeIII | GGCC | 2 cut(s) | 877, 1036 |
| HapII | CCGG | 2 cut(s) | 1017, 1118 |
| HhaI | GCGC | 1 cut(s) | 39 |
| Hin1II | CATG | 5 cut(s) | 128, 266, 506, 1180, 1303 |
| Hin6I | GCGC | 1 cut(s) | 37 |
| HinP1I | GCGC | 1 cut(s) | 37 |
| HincII | GTYRAC | 2 cut(s) | 631, 907 |
| HindII | GTYRAC | 2 cut(s) | 631, 907 |
| HindIII | AAGCTT | 2 cut(s) | 88, 1314 |
| HpaII | CCGG | 2 cut(s) | 1017, 1118 |
| HphI | GGTGA | 4 cut(s) | 52, 163, 286, 1005 |
| Hpy166II | GTNNAC | 5 cut(s) | 454, 631, 907, 1263, 1307 |
| Hpy188I | TCNGA | 7 cut(s) | 319, 559, 886, 940, 1173, 1186, 1245 |
| Hpy188III | TCNNGA | 4 cut(s) | 263, 545, 1104, 1118 |
| Hpy8I | GTNNAC | 5 cut(s) | 454, 631, 907, 1263, 1307 |
| HpyAV | CCTTC | 4 cut(s) | 89, 616, 739, 787 |
| HpyCH4III | ACNGT | 5 cut(s) | 64, 635, 1074, 1101, 1144 |
| HpyCH4IV | ACGT | 2 cut(s) | 150, 236 |
| HpyCH4V | TGCA | 3 cut(s) | 479, 1203, 1268 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 43, 921, 1200, 1274 |
| HpyF3I | CTNAG | 5 cut(s) | 138, 457, 650, 939, 1317 |
| HpySE526I | ACGT | 2 cut(s) | 150, 236 |
| Hsp92II | CATG | 5 cut(s) | 128, 266, 506, 1180, 1303 |
| HspAI | GCGC | 1 cut(s) | 37 |
| Kpn2I | TCCGGA | 1 cut(s) | 1117 |
| Kzo9I | GATC | 4 cut(s) | 683, 703, 1131, 1240 |
| LguI | GCTCTTC | 1 cut(s) | 1201 |
| LmnI | GCTCC | 3 cut(s) | 320, 1046, 1149 |
| Lsp1109I | GCAGC | 3 cut(s) | 491, 541, 1215 |
| LweI | GCATC | 3 cut(s) | 208, 466, 595 |
| MaeI | CTAG | 4 cut(s) | 27, 143, 699, 912 |
| MaeII | ACGT | 2 cut(s) | 150, 236 |
| MaeIII | GTNAC | 5 cut(s) | 58, 64, 232, 292, 965 |
| MalI | GATC | 4 cut(s) | 685, 705, 1133, 1242 |
| MboI | GATC | 4 cut(s) | 683, 703, 1131, 1240 |
| MboII | GAAGA | 9 cut(s) | 158, 212, 278, 455, 546, 560, 1040, 1073, 1188 |
| MflI | RGATCY | 1 cut(s) | 1240 |
| MluCI | AATT | 6 cut(s) | 117, 415, 540, 970, 1038, 1280 |
| MlyI | GAGTC | 3 cut(s) | 61, 560, 1181 |
| MnlI | CCTC | 8 cut(s) | 181, 184, 424, 619, 667, 742, 1231, 1267 |
| MroI | TCCGGA | 1 cut(s) | 1117 |
| MseI | TTAA | 5 cut(s) | 75, 165, 398, 672, 851 |
| MslI | CAYNNNNRTG | 1 cut(s) | 507 |
| MspA1I | CMGCKG | 2 cut(s) | 482, 1206 |
| MspI | CCGG | 2 cut(s) | 1017, 1118 |
| MspR9I | CCNGG | 5 cut(s) | 589, 665, 874, 893, 1017 |
| Mva1269I | GAATGC | 1 cut(s) | 1215 |
| MvaI | CCWGG | 4 cut(s) | 589, 665, 874, 893 |
| MvnI | CGCG | 2 cut(s) | 1026, 1105 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 43, 921, 1200, 1274 |
| NciI | CCSGG | 1 cut(s) | 1017 |
| NcoI | CCATGG | 1 cut(s) | 1176 |
| NdeII | GATC | 4 cut(s) | 683, 703, 1131, 1240 |
| NlaIII | CATG | 5 cut(s) | 128, 266, 506, 1180, 1303 |
| NlaIV | GGNNCC | 3 cut(s) | 351, 364, 1242 |
| NmuCI | GTSAC | 3 cut(s) | 58, 64, 292 |
| NruI | TCGCGA | 1 cut(s) | 1105 |
| NspI | RCATGY | 2 cut(s) | 128, 506 |
| PagI | TCATGA | 1 cut(s) | 262 |
| PciI | ACATGT | 1 cut(s) | 502 |
| PciSI | GCTCTTC | 1 cut(s) | 1201 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 417 |
| PctI | GAATGC | 1 cut(s) | 1215 |
| PfeI | GAWTC | 7 cut(s) | 179, 269, 355, 560, 584, 935, 1181 |
| PfoI | TCCNGGA | 1 cut(s) | 587 |
| PkrI | GCNGC | 4 cut(s) | 481, 531, 1025, 1205 |
| PleI | GAGTC | 3 cut(s) | 61, 559, 1181 |
| PpsI | GAGTC | 3 cut(s) | 61, 559, 1181 |
| PscI | ACATGT | 1 cut(s) | 502 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1302 |
| Psp6I | CCWGG | 4 cut(s) | 587, 663, 872, 891 |
| PspFI | CCCAGC | 1 cut(s) | 346 |
| PspGI | CCWGG | 4 cut(s) | 587, 663, 872, 891 |
| PspN4I | GGNNCC | 3 cut(s) | 351, 364, 1242 |
| PspPI | GGNCC | 3 cut(s) | 256, 350, 1120 |
| PsuI | RGATCY | 1 cut(s) | 1240 |
| PvuII | CAGCTG | 1 cut(s) | 482 |
| RruI | TCGCGA | 1 cut(s) | 1105 |
| RsaI | GTAC | 2 cut(s) | 100, 828 |
| RsaNI | GTAC | 2 cut(s) | 99, 827 |
| RseI | CAYNNNNRTG | 1 cut(s) | 507 |
| SapI | GCTCTTC | 1 cut(s) | 1201 |
| SaqAI | TTAA | 5 cut(s) | 75, 165, 398, 672, 851 |
| SatI | GCNGC | 4 cut(s) | 480, 530, 1024, 1204 |
| Sau3AI | GATC | 4 cut(s) | 683, 703, 1131, 1240 |
| Sau96I | GGNCC | 3 cut(s) | 256, 350, 1120 |
| SchI | GAGTC | 3 cut(s) | 61, 560, 1181 |
| ScrFI | CCNGG | 5 cut(s) | 589, 665, 874, 893, 1017 |
| SfaNI | GCATC | 3 cut(s) | 208, 466, 595 |
| SinI | GGWCC | 3 cut(s) | 256, 350, 1120 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 507 |
| SmlI | CTYRAG | 1 cut(s) | 1189 |
| SmoI | CTYRAG | 1 cut(s) | 1189 |
| SpeI | ACTAGT | 1 cut(s) | 26 |
| Sse9I | AATT | 6 cut(s) | 117, 415, 540, 970, 1038, 1280 |
| SsiI | CCGC | 2 cut(s) | 1024, 1206 |
| SspMI | CTAG | 4 cut(s) | 27, 143, 699, 912 |
| StyD4I | CCNGG | 5 cut(s) | 587, 663, 872, 891, 1015 |
| StyI | CCWWGG | 3 cut(s) | 252, 285, 1176 |
| TaaI | ACNGT | 5 cut(s) | 64, 635, 1074, 1101, 1144 |
| TaiI | ACGT | 2 cut(s) | 153, 239 |
| TaqI | TCGA | 2 cut(s) | 507, 578 |
| TaqII | GACCGA | 1 cut(s) | 367 |
| TasI | AATT | 6 cut(s) | 117, 415, 540, 970, 1038, 1280 |
| TauI | GCSGC | 1 cut(s) | 1026 |
| TfiI | GAWTC | 7 cut(s) | 179, 269, 355, 560, 584, 935, 1181 |
| Tru1I | TTAA | 5 cut(s) | 75, 165, 398, 672, 851 |
| Tru9I | TTAA | 5 cut(s) | 75, 165, 398, 672, 851 |
| TscAI | CASTG | 4 cut(s) | 658, 717, 872, 1147 |
| TseFI | GTSAC | 3 cut(s) | 58, 64, 292 |
| TseI | GCWGC | 3 cut(s) | 479, 529, 1203 |
| Tsp45I | GTSAC | 3 cut(s) | 58, 64, 292 |
| TspDTI | ATGAA | 5 cut(s) | 213, 279, 450, 456, 507 |
| TspGWI | ACGGA | 1 cut(s) | 384 |
| TspRI | CASTG | 4 cut(s) | 658, 717, 872, 1147 |
| VpaK11BI | GGWCC | 3 cut(s) | 256, 350, 1120 |
| XapI | RAATTY | 1 cut(s) | 117 |
| XceI | RCATGY | 2 cut(s) | 128, 506 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 304 |
| XmiI | GTMKAC | 2 cut(s) | 1262, 1306 |
| XspI | CTAG | 4 cut(s) | 27, 143, 699, 912 |